Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:28:55 (14709): wrapper (7.7.26015): starting
23:28:55 (14709): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 23:28:55] Arguments: --nthreads 8
[2025-11-22 23:28:55] Threads: 8
[2025-11-22 23:28:55] Checking for CVMFS
[2025-11-22 23:28:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 23:28:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 23:28:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 23:28:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 23:28:57] 2.11.2.0 15591 83508 100152 153187 0 127 22168248 25165825 4296 130560 3 23539844 99.870 13339339 2058 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-22 23:28:57] CVMFS is ok
[2025-11-22 23:28:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 23:28:57] Checking for apptainer binary...
[2025-11-22 23:28:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 23:28:57] Running /usr/bin/apptainer --version
[2025-11-22 23:28:58] apptainer version 1.3.2-1.el7
[2025-11-22 23:28:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 23:29:00] cg-vwn260.simple-grid.lan
[2025-11-22 23:29:00] apptainer works
[2025-11-22 23:29:00] Set ATHENA_PROC_NUMBER=8
[2025-11-22 23:29:00] Set ATHENA_CORE_NUMBER=8
[2025-11-22 23:29:00] Starting ATLAS job with PandaID=6893839081
[2025-11-22 23:29:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 00:31:14]  *** The last 200 lines of the pilot log: ***
[2025-11-24 00:31:14] 2025-11-23 23:29:52,311 | INFO     | monitor loop #6042: job 0:6893839081 is in state 'finished'
[2025-11-24 00:31:14] 2025-11-23 23:29:52,312 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 00:31:14] 2025-11-23 23:29:53,939 | INFO     | time since job start (89846s) is within the limit (172800.0s)
[2025-11-24 00:31:14] 2025-11-23 23:29:54,816 | INFO     | monitor loop #6043: job 0:6893839081 is in state 'finished'
[2025-11-24 00:31:14] 2025-11-23 23:29:54,817 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 00:31:14] 2025-11-23 23:29:55,947 | INFO     | time since job start (89848s) is within the limit (172800.0s)
[2025-11-24 00:31:14] 2025-11-23 23:29:57,327 | INFO     | monitor loop #6044: job 0:6893839081 is in state 'finished'
[2025-11-24 00:31:14] 2025-11-23 23:29:57,328 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 00:31:14] 2025-11-23 23:29:57,955 | INFO     | time since job start (89850s) is within the limit (172800.0s)
[2025-11-24 00:31:14] 2025-11-23 23:29:59,834 | INFO     | monitor loop #6045: job 0:6893839081 is in state 'finished'
[2025-11-24 00:31:14] 2025-11-23 23:29:59,835 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 00:31:14] 2025-11-23 23:29:59,962 | INFO     | time since job start (89852s) is within the limit (172800.0s)
[2025-11-24 00:31:14] 2025-11-23 23:30:01,971 | INFO     | time since job start (89854s) is within the limit (172800.0s)
[2025-11-24 00:31:14] 2025-11-23 23:30:02,341 | INFO     | monitor loop #6046: job 0:6893839081 is in state 'finished'
[2025-11-24 00:31:14] 2025-11-23 23:30:02,342 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 00:31:14] 2025-11-23 23:30:02,671 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 00:31:14] 2025-11-23 23:30:02,673 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-24 00:31:14] 2025-11-23 23:30:02,675 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6893839081/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 00:31:14] 2025-11-23 23:30:02,675 | INFO     | extracted standard info from prmon json
[2025-11-24 00:31:14] 2025-11-23 23:30:02,675 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 00:31:14] 2025-11-23 23:30:02,676 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 00:31:14] 2025-11-23 23:30:02,715 | INFO     | fitting pss+swap vs Time
[2025-11-24 00:31:14] 2025-11-23 23:30:02,718 | INFO     | sum of square deviations: 972967622251.9207
[2025-11-24 00:31:14] 2025-11-23 23:30:02,794 | INFO     | sum of deviations: 2132047108862.3818
[2025-11-24 00:31:14] 2025-11-23 23:30:02,794 | INFO     | mean x: 1763895837.840847
[2025-11-24 00:31:14] 2025-11-23 23:30:02,795 | INFO     | mean y: 2838765.207650273
[2025-11-24 00:31:14] 2025-11-23 23:30:02,795 | INFO     | intersect: -3862355651.744124
[2025-11-24 00:31:14] 2025-11-23 23:30:02,797 | INFO     | chi2: 22.10299351413678
[2025-11-24 00:31:14] 2025-11-23 23:30:02,799 | INFO     | sum of square deviations: 963033225377.8972
[2025-11-24 00:31:14] 2025-11-23 23:30:02,856 | INFO     | sum of deviations: 2610854244906.2305
[2025-11-24 00:31:14] 2025-11-23 23:30:02,856 | INFO     | mean x: 1763895685.345442
[2025-11-24 00:31:14] 2025-11-23 23:30:02,856 | INFO     | mean y: 2846113.6662097326
[2025-11-24 00:31:14] 2025-11-23 23:30:02,856 | INFO     | intersect: -4779205446.235898
[2025-11-24 00:31:14] 2025-11-23 23:30:02,858 | INFO     | chi2: 18.873641677150168
[2025-11-24 00:31:14] 2025-11-23 23:30:02,858 | INFO     | current chi2=18.873641677150168 (change=14.610472716834316 %)
[2025-11-24 00:31:14] 2025-11-23 23:30:02,859 | INFO     | right removable region: 1458
[2025-11-24 00:31:14] 2025-11-23 23:30:02,861 | INFO     | sum of square deviations: 963032027947.8972
[2025-11-24 00:31:14] 2025-11-23 23:30:02,931 | INFO     | sum of deviations: 1560856660957.9756
[2025-11-24 00:31:14] 2025-11-23 23:30:02,931 | INFO     | mean x: 1763895990.345442
[2025-11-24 00:31:14] 2025-11-23 23:30:02,931 | INFO     | mean y: 2847530.982179575
[2025-11-24 00:31:14] 2025-11-23 23:30:02,931 | INFO     | intersect: -2856028109.565783
[2025-11-24 00:31:14] 2025-11-23 23:30:02,933 | INFO     | chi2: 18.12777363103079
[2025-11-24 00:31:14] 2025-11-23 23:30:02,934 | INFO     | current chi2=18.12777363103079 (change=17.984984163179035 %)
[2025-11-24 00:31:14] 2025-11-23 23:30:02,934 | INFO     | left removable region: 10
[2025-11-24 00:31:14] 2025-11-23 23:30:02,936 | INFO     | sum of square deviations: 941414056941.6671
[2025-11-24 00:31:14] 2025-11-23 23:30:03,005 | INFO     | sum of deviations: 1875072703247.7395
[2025-11-24 00:31:14] 2025-11-23 23:30:03,006 | INFO     | mean x: 1763895959.8529005
[2025-11-24 00:31:14] 2025-11-23 23:30:03,006 | INFO     | mean y: 2860563.0738950274
[2025-11-24 00:31:14] 2025-11-23 23:30:03,006 | INFO     | intersect: -3510400303.7054534
[2025-11-24 00:31:14] 2025-11-23 23:30:03,008 | INFO     | chi2: 13.247959519912209
[2025-11-24 00:31:14] 2025-11-23 23:30:03,008 | INFO     | current memory leak: 1.99 B/s (using 1448 data points, chi2=13.25)
[2025-11-24 00:31:14] 2025-11-23 23:30:03,010 | INFO     | could have reported an average CPU frequency of 1999 MHz (49 samples)
[2025-11-24 00:31:14] 2025-11-23 23:30:03,011 | INFO     | ..............................
[2025-11-24 00:31:14] 2025-11-23 23:30:03,011 | INFO     | . Timing measurements:
[2025-11-24 00:31:14] 2025-11-23 23:30:03,011 | INFO     | . get job = 0 s
[2025-11-24 00:31:14] 2025-11-23 23:30:03,011 | INFO     | . initial setup = 6 s
[2025-11-24 00:31:14] 2025-11-23 23:30:03,011 | INFO     | . payload setup = 139 s
[2025-11-24 00:31:14] 2025-11-23 23:30:03,011 | INFO     | . stage-in = 0 s
[2025-11-24 00:31:14] 2025-11-23 23:30:03,011 | INFO     | . payload execution = 89415 s
[2025-11-24 00:31:14] 2025-11-23 23:30:03,011 | INFO     | . stage-out = 6 s
[2025-11-24 00:31:14] 2025-11-23 23:30:03,011 | INFO     | . log creation = 2 s
[2025-11-24 00:31:14] 2025-11-23 23:30:03,011 | INFO     | ..............................
[2025-11-24 00:31:14] 2025-11-23 23:30:03,165 | INFO     | 
[2025-11-24 00:31:14] 2025-11-23 23:30:03,166 | INFO     | job summary report
[2025-11-24 00:31:14] 2025-11-23 23:30:03,166 | INFO     | --------------------------------------------------
[2025-11-24 00:31:14] 2025-11-23 23:30:03,166 | INFO     | PanDA job id: 6893839081
[2025-11-24 00:31:14] 2025-11-23 23:30:03,166 | INFO     | task id: 47523449
[2025-11-24 00:31:14] 2025-11-23 23:30:03,166 | INFO     | errors: (none)
[2025-11-24 00:31:14] 2025-11-23 23:30:03,166 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 00:31:14] 2025-11-23 23:30:03,166 | INFO     | pilot state: finished 
[2025-11-24 00:31:14] 2025-11-23 23:30:03,167 | INFO     | transexitcode: 0
[2025-11-24 00:31:14] 2025-11-23 23:30:03,167 | INFO     | exeerrorcode: 0
[2025-11-24 00:31:14] 2025-11-23 23:30:03,167 | INFO     | exeerrordiag: 
[2025-11-24 00:31:14] 2025-11-23 23:30:03,167 | INFO     | exitcode: 0
[2025-11-24 00:31:14] 2025-11-23 23:30:03,167 | INFO     | exitmsg: OK
[2025-11-24 00:31:14] 2025-11-23 23:30:03,167 | INFO     | cpuconsumptiontime: 329636 s
[2025-11-24 00:31:14] 2025-11-23 23:30:03,167 | INFO     | nevents: 1000
[2025-11-24 00:31:14] 2025-11-23 23:30:03,167 | INFO     | neventsw: 0
[2025-11-24 00:31:14] 2025-11-23 23:30:03,167 | INFO     | pid: 25370
[2025-11-24 00:31:14] 2025-11-23 23:30:03,167 | INFO     | pgrp: 25370
[2025-11-24 00:31:14] 2025-11-23 23:30:03,167 | INFO     | corecount: 8
[2025-11-24 00:31:14] 2025-11-23 23:30:03,167 | INFO     | event service: False
[2025-11-24 00:31:14] 2025-11-23 23:30:03,168 | INFO     | sizes: {0: 2297979, 1: 2298664, 2: 2298863, 13: 2298863, 24: 2298919, 34: 2298947, 45: 2299103, 56: 2299131, 67: 2299159, 78: 2299187, 89: 2299243, 90: 2299813, 99
[2025-11-24 00:31:14] 2025-11-23 23:30:03,168 | INFO     | --------------------------------------------------
[2025-11-24 00:31:14] 2025-11-23 23:30:03,168 | INFO     | 
[2025-11-24 00:31:14] 2025-11-23 23:30:03,168 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-24 00:31:14] 2025-11-23 23:30:03,724 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 00:31:14] 2025-11-23 23:30:03,724 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 00:31:14] 2025-11-23 23:30:03,724 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 00:31:14] 2025-11-23 23:30:03,724 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 00:31:14] 2025-11-23 23:30:03,725 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 00:31:14] 2025-11-23 23:30:03,725 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 00:31:14] 2025-11-23 23:30:03,725 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 00:31:14] 2025-11-23 23:30:03,725 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 00:31:14] 2025-11-23 23:30:03,725 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 00:31:14] 2025-11-23 23:30:03,725 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 00:31:14] 2025-11-23 23:30:03,725 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 00:31:14] 2025-11-23 23:30:03,725 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 00:31:14] 2025-11-23 23:30:03,725 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 00:31:14] 2025-11-23 23:30:03,725 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 00:31:14] 2025-11-23 23:30:03,725 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 00:31:14] 2025-11-23 23:30:03,726 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 00:31:14] 2025-11-23 23:30:03,726 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 00:31:14] 2025-11-23 23:30:03,726 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 00:31:14] 2025-11-23 23:30:03,726 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 00:31:14] 2025-11-23 23:30:03,726 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 00:31:14] 2025-11-23 23:30:03,726 | INFO     | job 6893839081 has completed (purged errors)
[2025-11-24 00:31:14] 2025-11-23 23:30:03,726 | INFO     | overall cleanup function is called
[2025-11-24 00:31:14] 2025-11-23 23:30:04,759 | INFO     | --- collectZombieJob: --- 10, [25370]
[2025-11-24 00:31:14] 2025-11-23 23:30:04,760 | INFO     | zombie collector waiting for pid 25370
[2025-11-24 00:31:14] 2025-11-23 23:30:04,760 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 00:31:14] 2025-11-23 23:30:04,760 | INFO     | collected zombie processes
[2025-11-24 00:31:14] 2025-11-23 23:30:04,760 | INFO     | will attempt to kill all subprocesses of pid=25370
[2025-11-24 00:31:14] 2025-11-23 23:30:04,877 | INFO     | process IDs to be killed: [25370] (in reverse order)
[2025-11-24 00:31:14] 2025-11-23 23:30:05,508 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 00:31:14] 2025-11-23 23:30:05,509 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 00:31:14] 2025-11-23 23:30:05,513 | INFO     | did not find any defunct processes belonging to 25370
[2025-11-24 00:31:14] 2025-11-23 23:30:05,516 | INFO     | did not find any defunct processes belonging to 25370
[2025-11-24 00:31:14] 2025-11-23 23:30:05,565 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 00:31:14] 2025-11-23 23:30:05,565 | INFO     | ready for new job
[2025-11-24 00:31:14] 2025-11-23 23:30:05,565 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 00:31:14] 2025-11-23 23:30:05,572 | INFO     | ***************************************
[2025-11-24 00:31:14] 2025-11-23 23:30:05,573 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 00:31:14] 2025-11-23 23:30:05,573 | INFO     | ***************************************
[2025-11-24 00:31:14] 2025-11-23 23:30:05,573 | INFO     | 
[2025-11-24 00:31:14] 2025-11-23 23:30:05,574 | INFO     | pilot is running in a VM
[2025-11-24 00:31:14] 2025-11-23 23:30:05,574 | INFO     | architecture information:
[2025-11-24 00:31:14] 2025-11-23 23:30:05,580 | INFO     | executing command: cat /etc/os-release
[2025-11-24 00:31:14] 2025-11-23 23:30:05,708 | INFO     | cat /etc/os-release:
[2025-11-24 00:31:14] NAME="CentOS Linux"
[2025-11-24 00:31:14] VERSION="7 (Core)"
[2025-11-24 00:31:14] ID="centos"
[2025-11-24 00:31:14] ID_LIKE="rhel fedora"
[2025-11-24 00:31:14] VERSION_ID="7"
[2025-11-24 00:31:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 00:31:14] ANSI_COLOR="0;31"
[2025-11-24 00:31:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 00:31:14] HOME_URL="https://www.centos.org/"
[2025-11-24 00:31:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 00:31:14] 
[2025-11-24 00:31:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 00:31:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 00:31:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 00:31:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 00:31:14] 
[2025-11-24 00:31:14] 2025-11-23 23:30:05,708 | INFO     | ***************************************
[2025-11-24 00:31:14] 2025-11-23 23:30:06,212 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-24 00:31:14] 2025-11-23 23:30:06,442 | INFO     | sufficient remaining disk space (494902706176 B)
[2025-11-24 00:31:14] 2025-11-23 23:30:06,442 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 00:31:14] 2025-11-23 23:30:06,442 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 00:31:14] 2025-11-23 23:30:06,442 | INFO     | update_server=False
[2025-11-24 00:31:14] 2025-11-23 23:30:06,442 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 00:31:14] 2025-11-23 23:30:06,443 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 00:31:14] 2025-11-23 23:30:06,447 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 00:31:14] 2025-11-23 23:30:06,447 | INFO     | aborting loop
[2025-11-24 00:31:14] 2025-11-23 23:30:07,051 | INFO     | all payload control threads have been joined
[2025-11-24 00:31:14] 2025-11-23 23:30:07,442 | INFO     | all data control threads have been joined
[2025-11-24 00:31:14] 2025-11-23 23:30:07,449 | INFO     | [job] retrieve thread has finished
[2025-11-24 00:31:14] 2025-11-23 23:30:07,454 | INFO     | [job] job monitor thread has finished
[2025-11-24 00:31:14] 2025-11-23 23:30:07,801 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 00:31:14] 2025-11-23 23:30:08,058 | INFO     | [payload] control thread has finished
[2025-11-24 00:31:14] 2025-11-23 23:30:08,148 | INFO     | all job control threads have been joined
[2025-11-24 00:31:14] 2025-11-23 23:30:08,179 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 00:31:14] 2025-11-23 23:30:08,448 | INFO     | [data] control thread has finished
[2025-11-24 00:31:14] 2025-11-23 23:30:08,451 | INFO     | [data] copytool_out thread has finished
[2025-11-24 00:31:14] 2025-11-23 23:30:08,728 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 00:31:14] 2025-11-23 23:30:08,768 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 00:31:14] 2025-11-23 23:30:08,843 | INFO     | [data] copytool_in thread has finished
[2025-11-24 00:31:14] 2025-11-23 23:30:08,883 | INFO     | [payload] failed_post thread has finished
[2025-11-24 00:31:14] 2025-11-23 23:30:08,923 | INFO     | [job] validate thread has finished
[2025-11-24 00:31:14] 2025-11-23 23:30:08,948 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 00:31:14] 2025-11-23 23:30:09,045 | INFO     | [payload] validate_post thread has finished
[2025-11-24 00:31:14] 2025-11-23 23:30:09,157 | INFO     | [job] control thread has finished
[2025-11-24 00:31:14] 2025-11-23 23:30:09,185 | INFO     | [job] queue monitor thread has finished
[2025-11-24 00:31:14] 2025-11-23 23:30:09,762 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 00:31:14] 2025-11-23 23:30:13,771 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 00:31:14] 2025-11-23 23:30:34,044 | INFO     | 89863s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-24 00:31:14] 2025-11-23 23:30:35,177 | INFO     | PID=18643 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 00:31:14] 2025-11-23 23:30:35,178 | INFO     | .. there are 9 such processes running
[2025-11-24 00:31:14] 2025-11-23 23:30:35,179 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 00:31:14] 2025-11-23 23:30:35,179 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 00:31:14] 2025-11-23 23:30:35,179 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 00:31:14] 2025-11-23 23:31:03,878 | INFO     | [monitor] cgroup control has ended
[2025-11-24 00:31:14] 2025-11-23 23:31:04,919 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140149861332800)>', '<ExcThread(monitor, started 140149035869952)>']
[2025-11-24 00:31:14] 2025-11-23 23:31:05,353 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 00:31:14] 2025-11-23 23:31:05,354 | INFO     | [monitor] control thread has ended
[2025-11-24 00:31:14] 2025-11-23 23:31:09,945 | INFO     | all workflow threads have been joined
[2025-11-24 00:31:14] 2025-11-23 23:31:09,946 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 00:31:14] 2025-11-23 23:31:09,946 | INFO     | traces error code: 0
[2025-11-24 00:31:14] 2025-11-23 23:31:09,946 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 00:31:14] 2025-11-23 23:31:10,379 [wrapper] ==== pilot stdout END ====
[2025-11-24 00:31:14] 2025-11-23 23:31:10,494 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 00:31:14] 2025-11-23 23:31:10,573 [wrapper] pilotpid: 18643
[2025-11-24 00:31:14] 2025-11-23 23:31:10,645 [wrapper] Pilot exit status: 0
[2025-11-24 00:31:14] 2025-11-23 23:31:11,038 [wrapper] pandaids: 6893839081
[2025-11-24 00:31:14] 2025-11-23 23:31:11,907 [wrapper] cleanup supervisor_pilot 32500 18644
[2025-11-24 00:31:14] 2025-11-23 23:31:12,011 [wrapper] Test setup, not cleaning
[2025-11-24 00:31:14] 2025-11-23 23:31:12,113 [wrapper] apfmon messages muted
[2025-11-24 00:31:14] 2025-11-23 23:31:12,230 [wrapper] ==== wrapper stdout END ====
[2025-11-24 00:31:14] 2025-11-23 23:31:12,298 [wrapper] ==== wrapper stderr END ====
[2025-11-24 00:31:14]  *** Error codes and diagnostics ***
[2025-11-24 00:31:14]     "exeErrorCode": 0,
[2025-11-24 00:31:14]     "exeErrorDiag": "",
[2025-11-24 00:31:14]     "pilotErrorCode": 0,
[2025-11-24 00:31:14]     "pilotErrorDiag": "",
[2025-11-24 00:31:14]  *** Listing of results directory ***
[2025-11-24 00:31:14] total 1313940
[2025-11-24 00:31:14] -rw-r--r--. 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-24 00:31:14] -rwx------. 1 boinc boinc     36292 Nov 20 11:18 runpilot2-wrapper.sh
[2025-11-24 00:31:14] -rw-r--r--. 1 boinc boinc      5112 Nov 20 11:19 queuedata.json
[2025-11-24 00:31:14] -rw-r--r--. 1 boinc boinc       100 Nov 22 23:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 00:31:14] -rwxr-xr-x. 1 boinc boinc      7986 Nov 22 23:28 run_atlas
[2025-11-24 00:31:14] -rw-r--r--. 1 boinc boinc       105 Nov 22 23:28 job.xml
[2025-11-24 00:31:14] -rw-r--r--. 2 boinc boinc 408503414 Nov 22 23:28 EVNT.47493127._000145.pool.root.1
[2025-11-24 00:31:14] -rw-r--r--. 2 boinc boinc     15847 Nov 22 23:28 start_atlas.sh
[2025-11-24 00:31:14] drwxrwx--x. 2 boinc boinc        68 Nov 22 23:28 shared
[2025-11-24 00:31:14] -rw-r--r--. 2 boinc boinc    590102 Nov 22 23:28 input.tar.gz
[2025-11-24 00:31:14] -rw-r--r--. 1 boinc boinc      6392 Nov 22 23:28 init_data.xml
[2025-11-24 00:31:14] -rw-r--r--. 1 boinc boinc         0 Nov 22 23:28 boinc_lockfile
[2025-11-24 00:31:14] -rw-r--r--. 1 boinc boinc      2786 Nov 22 23:29 pandaJob.out
[2025-11-24 00:31:14] -rw-------. 1 boinc boinc    989784 Nov 22 23:32 agis_schedconf.cvmfs.json
[2025-11-24 00:31:14] drwx------. 5 boinc boinc      4096 Nov 22 23:32 pilot3
[2025-11-24 00:31:14] -rw-r--r--. 1 boinc boinc       533 Nov 24 00:00 boinc_task_state.xml
[2025-11-24 00:31:14] -rw-------. 1 boinc boinc 904116891 Nov 24 00:26 HITS.47523449._001450.pool.root.1
[2025-11-24 00:31:14] -rw-------. 1 boinc boinc      1031 Nov 24 00:28 memory_monitor_summary.json
[2025-11-24 00:31:14] -rw-------. 1 boinc boinc   1526164 Nov 24 00:28 agis_ddmendpoints.agis.ALL.json
[2025-11-24 00:31:14] -rw-------. 1 boinc boinc   2534252 Nov 24 00:28 log.47523449._001450.job.log.tgz.1
[2025-11-24 00:31:14] -rw-------. 1 boinc boinc      8642 Nov 24 00:30 heartbeat.json
[2025-11-24 00:31:14] -rw-------. 1 boinc boinc        95 Nov 24 00:30 pilot_heartbeat.json
[2025-11-24 00:31:14] -rw-r--r--. 1 boinc boinc      8192 Nov 24 00:31 boinc_mmap_file
[2025-11-24 00:31:14] -rw-r--r--. 1 boinc boinc        29 Nov 24 00:31 wrapper_checkpoint.txt
[2025-11-24 00:31:14] -rw-------. 1 boinc boinc      5000 Nov 24 00:31 pilotlog.txt
[2025-11-24 00:31:14] -rw-------. 1 boinc boinc  11937299 Nov 24 00:31 log.47523449._001450.job.log.1
[2025-11-24 00:31:14] -rw-------. 1 boinc boinc       353 Nov 24 00:31 output.list
[2025-11-24 00:31:14] -rw-r--r--. 1 boinc boinc       620 Nov 24 00:31 runtime_log
[2025-11-24 00:31:14] -rw-------. 1 boinc boinc  14489600 Nov 24 00:31 result.tar.gz
[2025-11-24 00:31:14] -rw-r--r--. 1 boinc boinc      8817 Nov 24 00:31 runtime_log.err
[2025-11-24 00:31:14] -rw-------. 1 boinc boinc       662 Nov 24 00:31 6wKODmZvGg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmiNGKDmDX4yyn.diag
[2025-11-24 00:31:14] -rw-r--r--. 1 boinc boinc     21458 Nov 24 00:31 stderr.txt
[2025-11-24 00:31:14] HITS file was successfully produced:
[2025-11-24 00:31:14] -rw-------. 1 boinc boinc 904116891 Nov 24 00:26 shared/HITS.pool.root.1
[2025-11-24 00:31:14]  *** Contents of shared directory: ***
[2025-11-24 00:31:14] total 1296608
[2025-11-24 00:31:14] -rw-r--r--. 2 boinc boinc 408503414 Nov 22 23:28 ATLAS.root_0
[2025-11-24 00:31:14] -rw-r--r--. 2 boinc boinc     15847 Nov 22 23:28 start_atlas.sh
[2025-11-24 00:31:14] -rw-r--r--. 2 boinc boinc    590102 Nov 22 23:28 input.tar.gz
[2025-11-24 00:31:14] -rw-------. 1 boinc boinc 904116891 Nov 24 00:26 HITS.pool.root.1
[2025-11-24 00:31:14] -rw-------. 1 boinc boinc  14489600 Nov 24 00:31 result.tar.gz
00:31:15 (14709): run_atlas exited; CPU time 330153.038213
00:31:15 (14709): called boinc_finish(0)

</stderr_txt>
]]>

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