Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:16:26 (14671): wrapper (7.7.26015): starting
00:16:26 (14671): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 00:16:26] Arguments: --nthreads 8
[2025-11-23 00:16:26] Threads: 8
[2025-11-23 00:16:26] Checking for CVMFS
[2025-11-23 00:16:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 00:16:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 00:16:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 00:16:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 00:16:29] 2.11.2.0 1304 280092 142460 153190 1 199 24997934 25165825 3987 130560 4 129540738 99.884 79298184 3009 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-23 00:16:29] CVMFS is ok
[2025-11-23 00:16:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 00:16:29] Checking for apptainer binary...
[2025-11-23 00:16:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 00:16:29] Running /usr/bin/apptainer --version
[2025-11-23 00:16:29] apptainer version 1.3.2-1.el7
[2025-11-23 00:16:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 00:16:31] cg-vwn245.simple-grid.lan
[2025-11-23 00:16:31] apptainer works
[2025-11-23 00:16:31] Set ATHENA_PROC_NUMBER=8
[2025-11-23 00:16:31] Set ATHENA_CORE_NUMBER=8
[2025-11-23 00:16:31] Starting ATLAS job with PandaID=6893838416
[2025-11-23 00:16:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 01:52:20]  *** The last 200 lines of the pilot log: ***
[2025-11-24 01:52:20] 2025-11-24 00:51:36,878 | INFO     | sum of deviations: 3488764909217.92
[2025-11-24 01:52:20] 2025-11-24 00:51:36,878 | INFO     | mean x: 1763899739.318212
[2025-11-24 01:52:20] 2025-11-24 00:51:36,878 | INFO     | mean y: 2870802.7318212143
[2025-11-24 01:52:20] 2025-11-24 00:51:36,879 | INFO     | intersect: -5889121388.643637
[2025-11-24 01:52:20] 2025-11-24 00:51:36,881 | INFO     | chi2: 8.769613448880367
[2025-11-24 01:52:20] 2025-11-24 00:51:36,884 | INFO     | sum of square deviations: 1034023925627.9956
[2025-11-24 01:52:20] 2025-11-24 00:51:36,956 | INFO     | sum of deviations: 3990452138482.203
[2025-11-24 01:52:20] 2025-11-24 00:51:36,957 | INFO     | mean x: 1763899586.8226237
[2025-11-24 01:52:20] 2025-11-24 00:51:36,957 | INFO     | mean y: 2878147.0234270417
[2025-11-24 01:52:20] 2025-11-24 00:51:36,957 | INFO     | intersect: -6804272735.901601
[2025-11-24 01:52:20] 2025-11-24 00:51:36,959 | INFO     | chi2: 5.646381994077989
[2025-11-24 01:52:20] 2025-11-24 00:51:36,959 | INFO     | current chi2=5.646381994077989 (change=35.614243124947855 %)
[2025-11-24 01:52:20] 2025-11-24 00:51:36,961 | INFO     | sum of square deviations: 1023677478481.7192
[2025-11-24 01:52:20] 2025-11-24 00:51:37,025 | INFO     | sum of deviations: 4352706839068.0586
[2025-11-24 01:52:20] 2025-11-24 00:51:37,026 | INFO     | mean x: 1763899434.3270652
[2025-11-24 01:52:20] 2025-11-24 00:51:37,026 | INFO     | mean y: 2883481.5768972463
[2025-11-24 01:52:20] 2025-11-24 00:51:37,026 | INFO     | intersect: -7497268951.795999
[2025-11-24 01:52:20] 2025-11-24 00:51:37,028 | INFO     | chi2: 3.618484584729056
[2025-11-24 01:52:20] 2025-11-24 00:51:37,028 | INFO     | current chi2=3.618484584729056 (change=35.914987889161985 %)
[2025-11-24 01:52:20] 2025-11-24 00:51:37,031 | INFO     | sum of square deviations: 1013400107037.2064
[2025-11-24 01:52:20] 2025-11-24 00:51:37,092 | INFO     | sum of deviations: 4452221358510.695
[2025-11-24 01:52:20] 2025-11-24 00:51:37,093 | INFO     | mean x: 1763899281.8301888
[2025-11-24 01:52:20] 2025-11-24 00:51:37,093 | INFO     | mean y: 2884957.0424528304
[2025-11-24 01:52:20] 2025-11-24 00:51:37,093 | INFO     | intersect: -7746541949.755489
[2025-11-24 01:52:20] 2025-11-24 00:51:37,095 | INFO     | chi2: 3.386333603806761
[2025-11-24 01:52:20] 2025-11-24 00:51:37,095 | INFO     | current chi2=3.386333603806761 (change=6.415696280758862 %)
[2025-11-24 01:52:20] 2025-11-24 00:51:37,096 | INFO     | right removable region: 1483
[2025-11-24 01:52:20] 2025-11-24 00:51:37,098 | INFO     | sum of square deviations: 1034022720267.9954
[2025-11-24 01:52:20] 2025-11-24 00:51:37,163 | INFO     | sum of deviations: 2983928393525.158
[2025-11-24 01:52:20] 2025-11-24 00:51:37,164 | INFO     | mean x: 1763899891.8226237
[2025-11-24 01:52:20] 2025-11-24 00:51:37,164 | INFO     | mean y: 2878190.2911646585
[2025-11-24 01:52:20] 2025-11-24 00:51:37,164 | INFO     | intersect: -5087291365.346201
[2025-11-24 01:52:20] 2025-11-24 00:51:37,166 | INFO     | chi2: 5.760448868666842
[2025-11-24 01:52:20] 2025-11-24 00:51:37,166 | INFO     | current chi2=5.760448868666842 (change=34.31353728136912 %)
[2025-11-24 01:52:20] 2025-11-24 00:51:37,168 | INFO     | sum of square deviations: 1023675705707.2643
[2025-11-24 01:52:20] 2025-11-24 00:51:37,230 | INFO     | sum of deviations: 2878654717694.2144
[2025-11-24 01:52:20] 2025-11-24 00:51:37,230 | INFO     | mean x: 1763900044.322364
[2025-11-24 01:52:20] 2025-11-24 00:51:37,230 | INFO     | mean y: 2879741.666218939
[2025-11-24 01:52:20] 2025-11-24 00:51:37,230 | INFO     | intersect: -4957342676.254131
[2025-11-24 01:52:20] 2025-11-24 00:51:37,232 | INFO     | chi2: 5.695301416767974
[2025-11-24 01:52:20] 2025-11-24 00:51:37,232 | INFO     | current chi2=5.695301416767974 (change=1.1309440181515826 %)
[2025-11-24 01:52:20] 2025-11-24 00:51:37,232 | INFO     | left removable region: 20
[2025-11-24 01:52:20] 2025-11-24 00:51:37,235 | INFO     | sum of square deviations: 970984201771.879
[2025-11-24 01:52:20] 2025-11-24 00:51:37,257 | INFO     | monitor loop #6174: job 0:6893838416 is in state 'finished'
[2025-11-24 01:52:20] 2025-11-24 00:51:37,257 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:52:20] 2025-11-24 00:51:37,305 | INFO     | sum of deviations: 3688383385534.28
[2025-11-24 01:52:20] 2025-11-24 00:51:37,306 | INFO     | mean x: 1763899861.330827
[2025-11-24 01:52:20] 2025-11-24 00:51:37,306 | INFO     | mean y: 2896482.2576896786
[2025-11-24 01:52:20] 2025-11-24 00:51:37,306 | INFO     | intersect: -6697458611.477743
[2025-11-24 01:52:20] 2025-11-24 00:51:37,308 | INFO     | chi2: 0.23607476683129683
[2025-11-24 01:52:20] 2025-11-24 00:51:37,308 | INFO     | current memory leak: 3.80 B/s (using 1463 data points, chi2=0.24)
[2025-11-24 01:52:20] 2025-11-24 00:51:37,311 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-24 01:52:20] 2025-11-24 00:51:37,312 | INFO     | ..............................
[2025-11-24 01:52:20] 2025-11-24 00:51:37,312 | INFO     | . Timing measurements:
[2025-11-24 01:52:20] 2025-11-24 00:51:37,312 | INFO     | . get job = 0 s
[2025-11-24 01:52:20] 2025-11-24 00:51:37,312 | INFO     | . initial setup = 10 s
[2025-11-24 01:52:20] 2025-11-24 00:51:37,312 | INFO     | . payload setup = 135 s
[2025-11-24 01:52:20] 2025-11-24 00:51:37,312 | INFO     | . stage-in = 0 s
[2025-11-24 01:52:20] 2025-11-24 00:51:37,312 | INFO     | . payload execution = 91546 s
[2025-11-24 01:52:20] 2025-11-24 00:51:37,312 | INFO     | . stage-out = 9 s
[2025-11-24 01:52:20] 2025-11-24 00:51:37,312 | INFO     | . log creation = 1 s
[2025-11-24 01:52:20] 2025-11-24 00:51:37,313 | INFO     | ..............................
[2025-11-24 01:52:20] 2025-11-24 00:51:37,344 | INFO     | time since job start (91925s) is within the limit (172800.0s)
[2025-11-24 01:52:20] 2025-11-24 00:51:37,451 | INFO     | 
[2025-11-24 01:52:20] 2025-11-24 00:51:37,451 | INFO     | job summary report
[2025-11-24 01:52:20] 2025-11-24 00:51:37,452 | INFO     | --------------------------------------------------
[2025-11-24 01:52:20] 2025-11-24 00:51:37,452 | INFO     | PanDA job id: 6893838416
[2025-11-24 01:52:20] 2025-11-24 00:51:37,452 | INFO     | task id: 47523449
[2025-11-24 01:52:20] 2025-11-24 00:51:37,452 | INFO     | errors: (none)
[2025-11-24 01:52:20] 2025-11-24 00:51:37,452 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 01:52:20] 2025-11-24 00:51:37,452 | INFO     | pilot state: finished 
[2025-11-24 01:52:20] 2025-11-24 00:51:37,452 | INFO     | transexitcode: 0
[2025-11-24 01:52:20] 2025-11-24 00:51:37,452 | INFO     | exeerrorcode: 0
[2025-11-24 01:52:20] 2025-11-24 00:51:37,452 | INFO     | exeerrordiag: 
[2025-11-24 01:52:20] 2025-11-24 00:51:37,452 | INFO     | exitcode: 0
[2025-11-24 01:52:20] 2025-11-24 00:51:37,453 | INFO     | exitmsg: OK
[2025-11-24 01:52:20] 2025-11-24 00:51:37,453 | INFO     | cpuconsumptiontime: 337515 s
[2025-11-24 01:52:20] 2025-11-24 00:51:37,453 | INFO     | nevents: 1000
[2025-11-24 01:52:20] 2025-11-24 00:51:37,453 | INFO     | neventsw: 0
[2025-11-24 01:52:20] 2025-11-24 00:51:37,453 | INFO     | pid: 25074
[2025-11-24 01:52:20] 2025-11-24 00:51:37,453 | INFO     | pgrp: 25074
[2025-11-24 01:52:20] 2025-11-24 00:51:37,453 | INFO     | corecount: 8
[2025-11-24 01:52:20] 2025-11-24 00:51:37,453 | INFO     | event service: False
[2025-11-24 01:52:20] 2025-11-24 00:51:37,453 | INFO     | sizes: {0: 2298581, 1: 2298836, 12: 2298836, 23: 2298864, 34: 2298892, 44: 2298920, 55: 2299076, 66: 2299104, 77: 2299132, 87: 2299188, 96: 2299478, 98: 2299786, 9
[2025-11-24 01:52:20] 2025-11-24 00:51:37,453 | INFO     | --------------------------------------------------
[2025-11-24 01:52:20] 2025-11-24 00:51:37,453 | INFO     | 
[2025-11-24 01:52:20] 2025-11-24 00:51:37,454 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2025-11-24 01:52:20] 2025-11-24 00:51:37,970 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 01:52:20] 2025-11-24 00:51:37,971 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 01:52:20] 2025-11-24 00:51:37,971 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 01:52:20] 2025-11-24 00:51:37,971 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 01:52:20] 2025-11-24 00:51:37,971 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 01:52:20] 2025-11-24 00:51:37,971 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 01:52:20] 2025-11-24 00:51:37,971 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 01:52:20] 2025-11-24 00:51:37,971 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 01:52:20] 2025-11-24 00:51:37,971 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 01:52:20] 2025-11-24 00:51:37,971 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 01:52:20] 2025-11-24 00:51:37,971 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 01:52:20] 2025-11-24 00:51:37,972 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 01:52:20] 2025-11-24 00:51:37,972 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 01:52:20] 2025-11-24 00:51:37,972 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 01:52:20] 2025-11-24 00:51:37,972 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 01:52:20] 2025-11-24 00:51:37,972 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 01:52:20] 2025-11-24 00:51:37,972 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 01:52:20] 2025-11-24 00:51:37,972 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 01:52:20] 2025-11-24 00:51:37,972 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 01:52:20] 2025-11-24 00:51:37,972 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 01:52:20] 2025-11-24 00:51:37,973 | INFO     | job 6893838416 has completed (purged errors)
[2025-11-24 01:52:20] 2025-11-24 00:51:37,973 | INFO     | overall cleanup function is called
[2025-11-24 01:52:20] 2025-11-24 00:51:38,991 | INFO     | --- collectZombieJob: --- 10, [25074]
[2025-11-24 01:52:20] 2025-11-24 00:51:38,991 | INFO     | zombie collector waiting for pid 25074
[2025-11-24 01:52:20] 2025-11-24 00:51:38,991 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 01:52:20] 2025-11-24 00:51:38,991 | INFO     | collected zombie processes
[2025-11-24 01:52:20] 2025-11-24 00:51:38,992 | INFO     | will attempt to kill all subprocesses of pid=25074
[2025-11-24 01:52:20] 2025-11-24 00:51:39,096 | INFO     | process IDs to be killed: [25074] (in reverse order)
[2025-11-24 01:52:20] 2025-11-24 00:51:39,422 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 01:52:20] 2025-11-24 00:51:39,423 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 01:52:20] 2025-11-24 00:51:39,427 | INFO     | did not find any defunct processes belonging to 25074
[2025-11-24 01:52:20] 2025-11-24 00:51:39,431 | INFO     | did not find any defunct processes belonging to 25074
[2025-11-24 01:52:20] 2025-11-24 00:51:39,434 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 01:52:20] 2025-11-24 00:51:39,434 | INFO     | ready for new job
[2025-11-24 01:52:20] 2025-11-24 00:51:39,434 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 01:52:20] 2025-11-24 00:51:39,441 | INFO     | ***************************************
[2025-11-24 01:52:20] 2025-11-24 00:51:39,441 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 01:52:20] 2025-11-24 00:51:39,441 | INFO     | ***************************************
[2025-11-24 01:52:20] 2025-11-24 00:51:39,441 | INFO     | 
[2025-11-24 01:52:20] 2025-11-24 00:51:39,442 | INFO     | pilot is running in a VM
[2025-11-24 01:52:20] 2025-11-24 00:51:39,442 | INFO     | architecture information:
[2025-11-24 01:52:20] 2025-11-24 00:51:39,443 | INFO     | executing command: cat /etc/os-release
[2025-11-24 01:52:20] 2025-11-24 00:51:39,474 | INFO     | cat /etc/os-release:
[2025-11-24 01:52:20] NAME="CentOS Linux"
[2025-11-24 01:52:20] VERSION="7 (Core)"
[2025-11-24 01:52:20] ID="centos"
[2025-11-24 01:52:20] ID_LIKE="rhel fedora"
[2025-11-24 01:52:20] VERSION_ID="7"
[2025-11-24 01:52:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 01:52:20] ANSI_COLOR="0;31"
[2025-11-24 01:52:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 01:52:20] HOME_URL="https://www.centos.org/"
[2025-11-24 01:52:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 01:52:20] 
[2025-11-24 01:52:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 01:52:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 01:52:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 01:52:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 01:52:20] 
[2025-11-24 01:52:20] 2025-11-24 00:51:39,475 | INFO     | ***************************************
[2025-11-24 01:52:20] 2025-11-24 00:51:39,979 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2025-11-24 01:52:20] 2025-11-24 00:51:40,313 | INFO     | sufficient remaining disk space (494355349504 B)
[2025-11-24 01:52:20] 2025-11-24 00:51:40,313 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 01:52:20] 2025-11-24 00:51:40,314 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 01:52:20] 2025-11-24 00:51:40,314 | INFO     | update_server=False
[2025-11-24 01:52:20] 2025-11-24 00:51:40,314 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 01:52:20] 2025-11-24 00:51:40,440 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 01:52:20] 2025-11-24 00:51:40,475 | INFO     | all data control threads have been joined
[2025-11-24 01:52:20] 2025-11-24 00:51:40,768 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 01:52:20] 2025-11-24 00:51:40,768 | INFO     | aborting loop
[2025-11-24 01:52:20] 2025-11-24 00:51:41,304 | INFO     | all payload control threads have been joined
[2025-11-24 01:52:20] 2025-11-24 00:51:41,320 | INFO     | [job] retrieve thread has finished
[2025-11-24 01:52:20] 2025-11-24 00:51:41,481 | INFO     | [data] control thread has finished
[2025-11-24 01:52:20] 2025-11-24 00:51:41,615 | INFO     | all job control threads have been joined
[2025-11-24 01:52:20] 2025-11-24 00:51:41,636 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 01:52:20] 2025-11-24 00:51:41,774 | INFO     | [job] job monitor thread has finished
[2025-11-24 01:52:20] 2025-11-24 00:51:41,879 | INFO     | [payload] failed_post thread has finished
[2025-11-24 01:52:20] 2025-11-24 00:51:41,890 | INFO     | [payload] validate_post thread has finished
[2025-11-24 01:52:20] 2025-11-24 00:51:41,914 | INFO     | [job] validate thread has finished
[2025-11-24 01:52:20] 2025-11-24 00:51:41,945 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 01:52:20] 2025-11-24 00:51:42,103 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 01:52:20] 2025-11-24 00:51:42,311 | INFO     | [payload] control thread has finished
[2025-11-24 01:52:20] 2025-11-24 00:51:42,447 | INFO     | [data] copytool_out thread has finished
[2025-11-24 01:52:20] 2025-11-24 00:51:42,465 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 01:52:20] 2025-11-24 00:51:42,614 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 01:52:20] 2025-11-24 00:51:42,622 | INFO     | [job] control thread has finished
[2025-11-24 01:52:20] 2025-11-24 00:51:42,627 | INFO     | [data] copytool_in thread has finished
[2025-11-24 01:52:20] 2025-11-24 00:51:43,471 | INFO     | [job] queue monitor thread has finished
[2025-11-24 01:52:20] 2025-11-24 00:51:43,655 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 01:52:20] 2025-11-24 00:51:47,666 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 01:52:20] 2025-11-24 00:52:10,564 | INFO     | PID=18471 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 01:52:20] 2025-11-24 00:52:10,564 | INFO     | .. there are 9 such processes running
[2025-11-24 01:52:20] 2025-11-24 00:52:10,564 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 01:52:20] 2025-11-24 00:52:10,564 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 01:52:20] 2025-11-24 00:52:10,565 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 01:52:20] 2025-11-24 00:52:11,814 | INFO     | [monitor] cgroup control has ended
[2025-11-24 01:52:20] 2025-11-24 00:52:12,942 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140620582459200)>', '<ExcThread(monitor, started 140620265920256)>']
[2025-11-24 01:52:20] 2025-11-24 00:52:13,583 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 01:52:20] 2025-11-24 00:52:13,583 | INFO     | [monitor] control thread has ended
[2025-11-24 01:52:20] 2025-11-24 00:52:17,968 | INFO     | all workflow threads have been joined
[2025-11-24 01:52:20] 2025-11-24 00:52:17,968 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 01:52:20] 2025-11-24 00:52:17,968 | INFO     | traces error code: 0
[2025-11-24 01:52:20] 2025-11-24 00:52:17,969 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 01:52:20] 2025-11-24 00:52:18,350 [wrapper] ==== pilot stdout END ====
[2025-11-24 01:52:20] 2025-11-24 00:52:18,400 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 01:52:20] 2025-11-24 00:52:18,502 [wrapper] pilotpid: 18471
[2025-11-24 01:52:20] 2025-11-24 00:52:18,644 [wrapper] Pilot exit status: 0
[2025-11-24 01:52:20] 2025-11-24 00:52:19,052 [wrapper] pandaids: 6893838416
[2025-11-24 01:52:20] 2025-11-24 00:52:19,124 [wrapper] cleanup supervisor_pilot 13211 18472
[2025-11-24 01:52:20] 2025-11-24 00:52:19,134 [wrapper] Test setup, not cleaning
[2025-11-24 01:52:20] 2025-11-24 00:52:19,169 [wrapper] apfmon messages muted
[2025-11-24 01:52:20] 2025-11-24 00:52:19,224 [wrapper] ==== wrapper stdout END ====
[2025-11-24 01:52:20] 2025-11-24 00:52:19,243 [wrapper] ==== wrapper stderr END ====
[2025-11-24 01:52:20]  *** Error codes and diagnostics ***
[2025-11-24 01:52:20]     "exeErrorCode": 0,
[2025-11-24 01:52:20]     "exeErrorDiag": "",
[2025-11-24 01:52:20]     "pilotErrorCode": 0,
[2025-11-24 01:52:20]     "pilotErrorDiag": "",
[2025-11-24 01:52:20]  *** Listing of results directory ***
[2025-11-24 01:52:20] total 1322744
[2025-11-24 01:52:20] -rw-r--r--. 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-24 01:52:20] -rw-r--r--. 1 boinc boinc      5112 Nov 20 11:17 queuedata.json
[2025-11-24 01:52:20] -rwx------. 1 boinc boinc     36292 Nov 20 11:18 runpilot2-wrapper.sh
[2025-11-24 01:52:20] -rw-r--r--. 1 boinc boinc       100 Nov 23 00:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 01:52:20] -rwxr-xr-x. 1 boinc boinc      7986 Nov 23 00:16 run_atlas
[2025-11-24 01:52:20] -rw-r--r--. 1 boinc boinc       105 Nov 23 00:16 job.xml
[2025-11-24 01:52:20] -rw-r--r--. 2 boinc boinc 407976441 Nov 23 00:16 EVNT.47493127._000135.pool.root.1
[2025-11-24 01:52:20] -rw-r--r--. 2 boinc boinc    590107 Nov 23 00:16 input.tar.gz
[2025-11-24 01:52:20] -rw-r--r--. 1 boinc boinc      6393 Nov 23 00:16 init_data.xml
[2025-11-24 01:52:20] -rw-r--r--. 2 boinc boinc     15847 Nov 23 00:16 start_atlas.sh
[2025-11-24 01:52:20] drwxrwx--x. 2 boinc boinc        68 Nov 23 00:16 shared
[2025-11-24 01:52:20] -rw-r--r--. 1 boinc boinc         0 Nov 23 00:16 boinc_lockfile
[2025-11-24 01:52:20] -rw-r--r--. 1 boinc boinc      2786 Nov 23 00:16 pandaJob.out
[2025-11-24 01:52:20] -rw-------. 1 boinc boinc    989784 Nov 23 00:19 agis_schedconf.cvmfs.json
[2025-11-24 01:52:20] drwx------. 5 boinc boinc      4096 Nov 23 00:19 pilot3
[2025-11-24 01:52:20] -rw-r--r--. 1 boinc boinc       533 Nov 24 01:34 boinc_task_state.xml
[2025-11-24 01:52:20] -rw-------. 1 boinc boinc 913032002 Nov 24 01:49 HITS.47523449._001345.pool.root.1
[2025-11-24 01:52:20] -rw-------. 1 boinc boinc      1028 Nov 24 01:50 memory_monitor_summary.json
[2025-11-24 01:52:20] -rw-------. 1 boinc boinc   1526164 Nov 24 01:50 agis_ddmendpoints.agis.ALL.json
[2025-11-24 01:52:20] -rw-------. 1 boinc boinc   2562878 Nov 24 01:50 log.47523449._001345.job.log.tgz.1
[2025-11-24 01:52:20] -rw-------. 1 boinc boinc        95 Nov 24 01:51 pilot_heartbeat.json
[2025-11-24 01:52:20] -rw-------. 1 boinc boinc      8642 Nov 24 01:51 heartbeat.json
[2025-11-24 01:52:20] -rw-------. 1 boinc boinc      4885 Nov 24 01:52 pilotlog.txt
[2025-11-24 01:52:20] -rw-------. 1 boinc boinc  12222434 Nov 24 01:52 log.47523449._001345.job.log.1
[2025-11-24 01:52:20] -rw-------. 1 boinc boinc       353 Nov 24 01:52 output.list
[2025-11-24 01:52:20] -rw-r--r--. 1 boinc boinc        29 Nov 24 01:52 wrapper_checkpoint.txt
[2025-11-24 01:52:20] -rw-r--r--. 1 boinc boinc       620 Nov 24 01:52 runtime_log
[2025-11-24 01:52:20] -rw-------. 1 boinc boinc  14807040 Nov 24 01:52 result.tar.gz
[2025-11-24 01:52:20] -rw-r--r--. 1 boinc boinc      8833 Nov 24 01:52 runtime_log.err
[2025-11-24 01:52:20] -rw-------. 1 boinc boinc       662 Nov 24 01:52 81IODmEvGg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmzLGKDmvY40rn.diag
[2025-11-24 01:52:20] -rw-r--r--. 1 boinc boinc      8192 Nov 24 01:52 boinc_mmap_file
[2025-11-24 01:52:20] -rw-r--r--. 1 boinc boinc     20920 Nov 24 01:52 stderr.txt
[2025-11-24 01:52:21] HITS file was successfully produced:
[2025-11-24 01:52:21] -rw-------. 1 boinc boinc 913032002 Nov 24 01:49 shared/HITS.pool.root.1
[2025-11-24 01:52:21]  *** Contents of shared directory: ***
[2025-11-24 01:52:21] total 1305108
[2025-11-24 01:52:21] -rw-r--r--. 2 boinc boinc 407976441 Nov 23 00:16 ATLAS.root_0
[2025-11-24 01:52:21] -rw-r--r--. 2 boinc boinc    590107 Nov 23 00:16 input.tar.gz
[2025-11-24 01:52:21] -rw-r--r--. 2 boinc boinc     15847 Nov 23 00:16 start_atlas.sh
[2025-11-24 01:52:21] -rw-------. 1 boinc boinc 913032002 Nov 24 01:49 HITS.pool.root.1
[2025-11-24 01:52:21] -rw-------. 1 boinc boinc  14807040 Nov 24 01:52 result.tar.gz
01:52:22 (14671): run_atlas exited; CPU time 338029.795914
01:52:22 (14671): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN