Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-25 02:25:42 (70747): vboxwrapper version 26210
2025-11-25 02:25:42 (70747): BOINC client version: 8.0.4
2025-11-25 02:25:42 (70747): Detected: VirtualBox VboxManage Interface (Version: 7.1.12)
2025-11-25 02:25:42 (70747): Successfully copied 'init_data.xml' to the shared directory.
2025-11-25 02:25:42 (70747): Create VM. (boinc_fd8dc9bea9579b74, slot#0)
2025-11-25 02:25:42 (70747): Setting Memory Size for VM. (4800MB)
2025-11-25 02:25:42 (70747): Setting CPU Count for VM. (8)
2025-11-25 02:25:42 (70747): Setting Chipset Options for VM.
2025-11-25 02:25:42 (70747): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-25 02:25:42 (70747): Setting Boot Options for VM.
2025-11-25 02:25:42 (70747): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-25 02:25:42 (70747): Enabling VM Network Access.
2025-11-25 02:25:42 (70747): Disabling USB Support for VM.
2025-11-25 02:25:43 (70747): Disabling COM Port Support for VM.
2025-11-25 02:25:43 (70747): Disabling LPT Port Support for VM.
2025-11-25 02:25:43 (70747): Disabling Audio Support for VM.
2025-11-25 02:25:43 (70747): Disabling Clipboard Support for VM.
2025-11-25 02:25:43 (70747): Disabling Drag and Drop Support for VM.
2025-11-25 02:25:43 (70747): Adding storage controller(s) to VM.
2025-11-25 02:25:43 (70747): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-25 02:25:43 (70747): Adding VirtualBox Guest Additions to VM.
2025-11-25 02:25:44 (70747): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-25 02:25:44 (70747): forwarding host port 46565 to guest port 80
2025-11-25 02:25:44 (70747): Enabling remote desktop for VM.
2025-11-25 02:25:44 (70747): Enabling shared directory for VM.
2025-11-25 02:25:44 (70747): Starting VM using VBoxManage interface. (boinc_fd8dc9bea9579b74, slot#0)
2025-11-25 02:25:45 (70747): Successfully started VM. (PID = '71355')
2025-11-25 02:25:45 (70747): Reporting VM Process ID to BOINC.
2025-11-25 02:25:45 (70747): Guest Log: BIOS: VirtualBox 7.1.12
2025-11-25 02:25:45 (70747): Guest Log: CPUID EDX: 0x178bfbff
2025-11-25 02:25:45 (70747): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-25 02:25:45 (70747): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-25 02:25:45 (70747): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-25 02:25:45 (70747): Detected: Web Application Enabled (http://localhost:46565)
2025-11-25 02:25:45 (70747): Detected: Remote Desktop Enabled (localhost:48949)
2025-11-25 02:25:45 (70747): Preference change detected
2025-11-25 02:25:45 (70747): Setting CPU throttle for VM. (100%)
2025-11-25 02:25:45 (70747): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-25 02:25:47 (70747): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-25 02:25:47 (70747): Guest Log: BIOS: Booting from Hard Disk...
2025-11-25 02:25:50 (70747): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-25 02:25:50 (70747): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-25 02:25:50 (70747): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-25 02:25:50 (70747): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-25 02:25:50 (70747): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-25 02:25:50 (70747): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-25 02:25:50 (70747): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-25 02:25:50 (70747): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-25 02:25:50 (70747): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-25 02:25:50 (70747): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-25 02:25:50 (70747): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-25 02:25:50 (70747): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-25 02:25:50 (70747): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-25 02:25:50 (70747): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-25 02:25:50 (70747): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-25 02:25:50 (70747): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-25 02:25:50 (70747): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-25 02:25:50 (70747): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-25 02:25:50 (70747): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-25 02:25:50 (70747): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-25 02:25:50 (70747): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-25 02:25:50 (70747): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-25 02:25:50 (70747): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-25 02:25:50 (70747): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-25 02:25:50 (70747): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-25 02:25:50 (70747): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-25 02:25:50 (70747): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-25 02:25:50 (70747): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-25 02:25:50 (70747): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-25 02:25:50 (70747): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-25 02:25:50 (70747): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-25 02:25:50 (70747): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-25 02:25:58 (70747): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-25 02:25:58 (70747): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-25 02:26:05 (70747): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-25 02:26:05 (70747): Guest Log: 00:00:00.000295 main     Log opened 2025-11-24T17:26:03.387890000Z
2025-11-25 02:26:05 (70747): Guest Log: 00:00:00.000517 main     OS Product: Linux
2025-11-25 02:26:05 (70747): Guest Log: 00:00:00.000616 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-25 02:26:05 (70747): Guest Log: 00:00:00.000672 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-25 02:26:05 (70747): Guest Log: 00:00:00.000727 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-25 02:26:05 (70747): Guest Log: 00:00:00.000729 main     Process ID: 1396
2025-11-25 02:26:05 (70747): Guest Log: 00:00:00.000730 main     Package type: LINUX_64BITS_GENERIC
2025-11-25 02:26:05 (70747): Guest Log: 00:00:00.003037 main     5.2.32 r132073 started. Verbose level = 0
2025-11-25 02:26:05 (70747): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-25 02:26:05 (70747): Guest Log: [INFO] Mounting shared directory
2025-11-25 02:26:05 (70747): Guest Log: [INFO] Checking for init_data.xml
2025-11-25 02:26:21 (70747): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-25 02:26:21 (70747): Guest Log: [INFO] Detected branch: prod
2025-11-25 02:26:22 (70747): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-25 02:26:22 (70747): Guest Log: Copying input files
2025-11-25 02:26:24 (70747): Guest Log: Copied input files into RunAtlas.
2025-11-25 02:26:24 (70747): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-25 02:26:24 (70747): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-25 02:26:24 (70747): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-25 02:26:24 (70747): Guest Log: Further information can be found at the LHC@home message board.
2025-11-25 02:27:28 (70747): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-25 02:27:29 (70747): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-25 02:27:29 (70747): Guest Log: 2.6.3.0 1675 1 30152 153254 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-11-25 02:27:30 (70747): Guest Log: copied the webapp to /var/www
2025-11-25 02:27:30 (70747): Guest Log: ATHENA_PROC_NUMBER=8
2025-11-25 02:27:30 (70747): Guest Log: ATHENA_CORE_NUMBER=8
2025-11-25 02:27:32 (70747): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-25 02:27:32 (70747): Guest Log:  *** Starting ATLAS job. (PandaID=6893837135 taskID=47523449) ***
2025-11-25 04:04:46 (70747): Status Report: Elapsed Time: '6000.000000'
2025-11-25 04:04:46 (70747): Status Report: CPU Time: '30971.860000'
2025-11-25 05:43:47 (70747): Status Report: Elapsed Time: '12000.000000'
2025-11-25 05:43:47 (70747): Status Report: CPU Time: '78096.070000'
2025-11-25 07:22:47 (70747): Status Report: Elapsed Time: '18000.000000'
2025-11-25 07:22:47 (70747): Status Report: CPU Time: '125268.940000'
2025-11-25 09:01:48 (70747): Status Report: Elapsed Time: '24000.000000'
2025-11-25 09:01:48 (70747): Status Report: CPU Time: '172446.600000'
2025-11-25 10:40:48 (70747): Status Report: Elapsed Time: '30000.000000'
2025-11-25 10:40:48 (70747): Status Report: CPU Time: '219637.580000'
2025-11-25 12:19:49 (70747): Status Report: Elapsed Time: '36000.000000'
2025-11-25 12:19:49 (70747): Status Report: CPU Time: '266763.250000'
2025-11-25 13:58:49 (70747): Status Report: Elapsed Time: '42000.000000'
2025-11-25 13:58:49 (70747): Status Report: CPU Time: '313906.060000'
2025-11-25 15:37:50 (70747): Status Report: Elapsed Time: '48000.000000'
2025-11-25 15:37:50 (70747): Status Report: CPU Time: '360944.160000'
2025-11-25 17:16:51 (70747): Status Report: Elapsed Time: '54000.000000'
2025-11-25 17:16:51 (70747): Status Report: CPU Time: '407038.450000'
2025-11-25 18:55:51 (70747): Status Report: Elapsed Time: '60000.000000'
2025-11-25 18:55:51 (70747): Status Report: CPU Time: '452699.070000'
2025-11-25 20:34:52 (70747): Status Report: Elapsed Time: '66000.000000'
2025-11-25 20:34:52 (70747): Status Report: CPU Time: '493217.400000'
2025-11-25 21:42:17 (70747): Guest Log:  *** Job finished ***
2025-11-25 21:42:17 (70747): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-25 21:42:17 (70747): Guest Log: 2025-11-25 12:41:58,841 | INFO     | all workflow threads have been joined
2025-11-25 21:42:17 (70747): Guest Log: 2025-11-25 12:41:58,841 | INFO     | end of generic workflow (traces error code: 0)
2025-11-25 21:42:17 (70747): Guest Log: 2025-11-25 12:41:58,842 | INFO     | traces error code: 0
2025-11-25 21:42:17 (70747): Guest Log: 2025-11-25 12:41:58,842 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-25 21:42:17 (70747): Guest Log: 2025-11-25 12:42:15,394 | INFO     | PID=6160 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-11-25 21:42:17 (70747): Guest Log: 2025-11-25 12:42:15,395 | INFO     | found 0 job(s) in 20 queues
2025-11-25 21:42:17 (70747): Guest Log: 2025-11-25 12:42:15,395 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-25 21:42:17 (70747): Guest Log: 2025-11-25 12:42:15,395 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-25 21:42:17 (70747): Guest Log: 2025-11-25 12:42:15,395 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-25 21:42:17 (70747): Guest Log: 2025-11-25 12:42:15,396 | INFO     | [monitor] control thread has ended
2025-11-25 21:42:17 (70747): Guest Log: 2025-11-25 12:42:15,527 [wrapper] ==== pilot stdout END ====
2025-11-25 21:42:17 (70747): Guest Log: 2025-11-25 12:42:15,534 [wrapper] ==== wrapper stdout RESUME ====
2025-11-25 21:42:17 (70747): Guest Log: 2025-11-25 12:42:15,540 [wrapper] pilotpid: 6160
2025-11-25 21:42:17 (70747): Guest Log: 2025-11-25 12:42:15,546 [wrapper] Pilot exit status: 0
2025-11-25 21:42:17 (70747): Guest Log: 2025-11-25 12:42:15,567 [wrapper] pandaids: 6893837135
2025-11-25 21:42:17 (70747): Guest Log: 2025-11-25 12:42:15,615 [wrapper] cleanup supervisor_pilot   622 6161
2025-11-25 21:42:17 (70747): Guest Log: 2025-11-25 12:42:15,622 [wrapper] Test setup, not cleaning
2025-11-25 21:42:17 (70747): Guest Log: 2025-11-25 12:42:15,629 [wrapper] apfmon messages muted
2025-11-25 21:42:17 (70747): Guest Log: 2025-11-25 12:42:15,636 [wrapper] ==== wrapper stdout END ====
2025-11-25 21:42:17 (70747): Guest Log: 2025-11-25 12:42:15,643 [wrapper] ==== wrapper stderr END ====
2025-11-25 21:42:17 (70747): Guest Log:  *** Error codes and diagnostics ***
2025-11-25 21:42:17 (70747): Guest Log:     "exeErrorCode": 0,
2025-11-25 21:42:17 (70747): Guest Log:     "exeErrorDiag": "",
2025-11-25 21:42:17 (70747): Guest Log:     "pilotErrorCode": 0,
2025-11-25 21:42:17 (70747): Guest Log:     "pilotErrorDiag": "",
2025-11-25 21:42:17 (70747): Guest Log:  *** Listing of results directory ***
2025-11-25 21:42:17 (70747): Guest Log: total 914228
2025-11-25 21:42:17 (70747): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 20 10:06 pilot3.tar.gz
2025-11-25 21:42:17 (70747): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 20 10:17 queuedata.json
2025-11-25 21:42:17 (70747): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 20 10:18 runpilot2-wrapper.sh
2025-11-25 21:42:17 (70747): Guest Log: -rw-r--r--. 1 atlas atlas     15847 Nov 24 17:26 start_atlas.sh
2025-11-25 21:42:17 (70747): Guest Log: -rw-r--r--. 1 atlas atlas    590102 Nov 24 17:26 input.tar.gz
2025-11-25 21:42:17 (70747): Guest Log: -rw-r--r--. 1 atlas atlas      6456 Nov 24 17:26 init_data.xml
2025-11-25 21:42:17 (70747): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 24 17:26 EVNT.47493127._000117.pool.root.1 -> /data/./ATLAS.root_0
2025-11-25 21:42:17 (70747): Guest Log: -rw-r--r--. 1 atlas atlas      2786 Nov 24 17:27 pandaJob.out
2025-11-25 21:42:17 (70747): Guest Log: -rw-------. 1 atlas atlas    991801 Nov 24 17:32 agis_schedconf.cvmfs.json
2025-11-25 21:42:17 (70747): Guest Log: drwx------. 5 atlas atlas      4096 Nov 24 17:32 pilot3
2025-11-25 21:42:17 (70747): Guest Log: -rw-------. 1 atlas atlas 909958816 Nov 25 12:40 HITS.47523449._001167.pool.root.1
2025-11-25 21:42:17 (70747): Guest Log: -rw-------. 1 atlas atlas      1053 Nov 25 12:40 memory_monitor_summary.json
2025-11-25 21:42:17 (70747): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 25 12:41 agis_ddmendpoints.agis.ALL.json
2025-11-25 21:42:17 (70747): Guest Log: -rw-------. 1 atlas atlas   2286475 Nov 25 12:41 log.47523449._001167.job.log.tgz.1
2025-11-25 21:42:17 (70747): Guest Log: -rw-------. 1 atlas atlas        95 Nov 25 12:41 pilot_heartbeat.json
2025-11-25 21:42:17 (70747): Guest Log: -rw-------. 1 atlas atlas      8659 Nov 25 12:41 heartbeat.json
2025-11-25 21:42:17 (70747): Guest Log: -rw-------. 1 atlas atlas       744 Nov 25 12:42 pilotlog.txt
2025-11-25 21:42:17 (70747): Guest Log: -rw-------. 1 atlas atlas   8896655 Nov 25 12:42 log.47523449._001167.job.log.1
2025-11-25 21:42:17 (70747): Guest Log: -rw-------. 1 atlas atlas       353 Nov 25 12:42 output.list
2025-11-25 21:42:17 (70747): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 25 12:42 runtime_log
2025-11-25 21:42:17 (70747): Guest Log: -rw-------. 1 atlas atlas  11202560 Nov 25 12:42 result.tar.gz
2025-11-25 21:42:17 (70747): Guest Log: -rw-------. 1 atlas atlas       671 Nov 25 12:42 WGCODm2uGg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmNLGKDmi0uaPn.diag
2025-11-25 21:42:17 (70747): Guest Log: -rw-r--r--. 1 atlas atlas      8761 Nov 25 12:42 runtime_log.err
2025-11-25 21:42:17 (70747): Guest Log: Looking for outputfile HITS.47523449._001167.pool.root.1
2025-11-25 21:42:17 (70747): Guest Log: HITS file was successfully produced
2025-11-25 21:42:17 (70747): Guest Log: -rw-------. 1 atlas atlas 909958816 Nov 25 12:40 /home/atlas/RunAtlas/HITS.47523449._001167.pool.root.1
2025-11-25 21:42:17 (70747): Guest Log: Successfully finished the ATLAS job!
2025-11-25 21:42:17 (70747): Guest Log: Copying the results back to the shared directory!
2025-11-25 21:42:18 (70747): Guest Log:  *** Contents of shared directory: ***
2025-11-25 21:42:18 (70747): Guest Log: total 408776
2025-11-25 21:42:18 (70747): Guest Log: -rw-r--r--. 1 root root 406760066 Nov 24 17:25 ATLAS.root_0
2025-11-25 21:42:18 (70747): Guest Log: -rw-rw-r--. 1 root root      6456 Nov 24 17:25 init_data.xml
2025-11-25 21:42:18 (70747): Guest Log: -rw-r--r--. 1 root root    590102 Nov 24 17:25 input.tar.gz
2025-11-25 21:42:18 (70747): Guest Log: -rw-r--r--. 1 root root  11202560 Nov 25 12:42 result.tar.gz
2025-11-25 21:42:18 (70747): Guest Log: -rw-r--r--. 1 root root     15847 Nov 24 17:25 start_atlas.sh
2025-11-25 21:42:18 (70747): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-25 21:42:18 (70747): VM Completion File Detected.
2025-11-25 21:42:18 (70747): Powering off VM.
2025-11-25 21:42:19 (70747): Successfully stopped VM.
2025-11-25 21:42:19 (70747): Deregistering VM. (boinc_fd8dc9bea9579b74, slot#0)
2025-11-25 21:42:19 (70747): Removing network bandwidth throttle group from VM.
2025-11-25 21:42:19 (70747): Removing VM from VirtualBox.
2025-11-25 21:42:24 (70747): called boinc_finish(0)

</stderr_txt>
]]>

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