Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:13:27 (6046): wrapper (7.7.26015): starting
00:13:27 (6046): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 00:13:27] Arguments: --nthreads 8
[2025-11-23 00:13:27] Threads: 8
[2025-11-23 00:13:27] Checking for CVMFS
[2025-11-23 00:13:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 00:13:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 00:13:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 00:13:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 00:13:29] 2.11.2.0 25006 280081 142272 153188 0 95 19342062 25165825 4292 130560 2 135998351 99.872 77874213 3097 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-23 00:13:29] CVMFS is ok
[2025-11-23 00:13:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 00:13:29] Checking for apptainer binary...
[2025-11-23 00:13:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 00:13:29] Running /usr/bin/apptainer --version
[2025-11-23 00:13:29] apptainer version 1.3.2-1.el7
[2025-11-23 00:13:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 00:13:44] cg-vwn386.simple-grid.lan
[2025-11-23 00:13:44] apptainer works
[2025-11-23 00:13:44] Set ATHENA_PROC_NUMBER=8
[2025-11-23 00:13:44] Set ATHENA_CORE_NUMBER=8
[2025-11-23 00:13:44] Starting ATLAS job with PandaID=6893841636
[2025-11-23 00:13:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 01:59:42]  *** The last 200 lines of the pilot log: ***
[2025-11-24 01:59:42] 2025-11-24 00:58:25,179 | INFO     | time since job start (92432s) is within the limit (172800.0s)
[2025-11-24 01:59:42] 2025-11-24 00:58:26,632 | INFO     | monitor loop #6195: job 0:6893841636 is in state 'finished'
[2025-11-24 01:59:42] 2025-11-24 00:58:26,633 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:59:42] 2025-11-24 00:58:27,185 | INFO     | time since job start (92434s) is within the limit (172800.0s)
[2025-11-24 01:59:42] 2025-11-24 00:58:29,138 | INFO     | monitor loop #6196: job 0:6893841636 is in state 'finished'
[2025-11-24 01:59:42] 2025-11-24 00:58:29,138 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:59:42] 2025-11-24 00:58:29,191 | INFO     | time since job start (92436s) is within the limit (172800.0s)
[2025-11-24 01:59:42] 2025-11-24 00:58:31,200 | INFO     | time since job start (92438s) is within the limit (172800.0s)
[2025-11-24 01:59:42] 2025-11-24 00:58:31,643 | INFO     | monitor loop #6197: job 0:6893841636 is in state 'finished'
[2025-11-24 01:59:42] 2025-11-24 00:58:31,643 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:59:42] 2025-11-24 00:58:33,208 | INFO     | time since job start (92440s) is within the limit (172800.0s)
[2025-11-24 01:59:42] 2025-11-24 00:58:34,148 | INFO     | monitor loop #6198: job 0:6893841636 is in state 'finished'
[2025-11-24 01:59:42] 2025-11-24 00:58:34,149 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:59:42] 2025-11-24 00:58:34,337 | INFO     | PID=9895 has CPU usage=15.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 01:59:42] 2025-11-24 00:58:34,337 | INFO     | .. there are 8 such processes running
[2025-11-24 01:59:42] 2025-11-24 00:58:34,542 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 01:59:42] 2025-11-24 00:58:34,544 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-24 01:59:42] 2025-11-24 00:58:34,545 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-6893841636/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 01:59:42] 2025-11-24 00:58:34,546 | INFO     | extracted standard info from prmon json
[2025-11-24 01:59:42] 2025-11-24 00:58:34,546 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 01:59:42] 2025-11-24 00:58:34,546 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 01:59:42] 2025-11-24 00:58:34,575 | INFO     | fitting pss+swap vs Time
[2025-11-24 01:59:42] 2025-11-24 00:58:34,578 | INFO     | sum of square deviations: 1061249979854.2577
[2025-11-24 01:59:42] 2025-11-24 00:58:34,642 | INFO     | sum of deviations: 4395788533366.5034
[2025-11-24 01:59:42] 2025-11-24 00:58:34,642 | INFO     | mean x: 1763899907.3443928
[2025-11-24 01:59:42] 2025-11-24 00:58:34,642 | INFO     | mean y: 2830175.6695421366
[2025-11-24 01:59:42] 2025-11-24 00:58:34,643 | INFO     | intersect: -7303394685.484798
[2025-11-24 01:59:42] 2025-11-24 00:58:34,644 | INFO     | chi2: 27.1345793043605
[2025-11-24 01:59:42] 2025-11-24 00:58:34,647 | INFO     | sum of square deviations: 1050722391072.6937
[2025-11-24 01:59:42] 2025-11-24 00:58:34,707 | INFO     | sum of deviations: 4869661727064.701
[2025-11-24 01:59:42] 2025-11-24 00:58:34,707 | INFO     | mean x: 1763899754.8488681
[2025-11-24 01:59:42] 2025-11-24 00:58:34,707 | INFO     | mean y: 2837040.655126498
[2025-11-24 01:59:42] 2025-11-24 00:58:34,707 | INFO     | intersect: -8172105455.618445
[2025-11-24 01:59:42] 2025-11-24 00:58:34,709 | INFO     | chi2: 24.238244556197962
[2025-11-24 01:59:42] 2025-11-24 00:58:34,709 | INFO     | current chi2=24.238244556197962 (change=10.673962237170558 %)
[2025-11-24 01:59:42] 2025-11-24 00:58:34,709 | INFO     | right removable region: 1501
[2025-11-24 01:59:42] 2025-11-24 00:58:34,712 | INFO     | sum of square deviations: 1050721155212.6938
[2025-11-24 01:59:42] 2025-11-24 00:58:34,791 | INFO     | sum of deviations: 3762431456578.2393
[2025-11-24 01:59:42] 2025-11-24 00:58:34,792 | INFO     | mean x: 1763900059.8488681
[2025-11-24 01:59:42] 2025-11-24 00:58:34,792 | INFO     | mean y: 2839349.053928096
[2025-11-24 01:59:42] 2025-11-24 00:58:34,792 | INFO     | intersect: -6313349335.7472315
[2025-11-24 01:59:42] 2025-11-24 00:58:34,794 | INFO     | chi2: 22.273000664100575
[2025-11-24 01:59:42] 2025-11-24 00:58:34,794 | INFO     | current chi2=22.273000664100575 (change=17.916543262856756 %)
[2025-11-24 01:59:42] 2025-11-24 00:58:34,794 | INFO     | left removable region: 10
[2025-11-24 01:59:42] 2025-11-24 00:58:34,796 | INFO     | sum of square deviations: 1027804810033.0312
[2025-11-24 01:59:42] 2025-11-24 00:58:34,854 | INFO     | sum of deviations: 3764448717123.581
[2025-11-24 01:59:42] 2025-11-24 00:58:34,855 | INFO     | mean x: 1763900029.3588195
[2025-11-24 01:59:42] 2025-11-24 00:58:34,855 | INFO     | mean y: 2856406.3970489604
[2025-11-24 01:59:42] 2025-11-24 00:58:34,855 | INFO     | intersect: -6457622410.043455
[2025-11-24 01:59:42] 2025-11-24 00:58:34,857 | INFO     | chi2: 14.595686501724119
[2025-11-24 01:59:42] 2025-11-24 00:58:34,857 | INFO     | current memory leak: 3.66 B/s (using 1491 data points, chi2=14.60)
[2025-11-24 01:59:42] 2025-11-24 00:58:34,860 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-24 01:59:42] 2025-11-24 00:58:34,860 | INFO     | ..............................
[2025-11-24 01:59:42] 2025-11-24 00:58:34,860 | INFO     | . Timing measurements:
[2025-11-24 01:59:42] 2025-11-24 00:58:34,860 | INFO     | . get job = 0 s
[2025-11-24 01:59:42] 2025-11-24 00:58:34,860 | INFO     | . initial setup = 7 s
[2025-11-24 01:59:42] 2025-11-24 00:58:34,860 | INFO     | . payload setup = 153 s
[2025-11-24 01:59:42] 2025-11-24 00:58:34,861 | INFO     | . stage-in = 0 s
[2025-11-24 01:59:42] 2025-11-24 00:58:34,861 | INFO     | . payload execution = 92075 s
[2025-11-24 01:59:42] 2025-11-24 00:58:34,861 | INFO     | . stage-out = 3 s
[2025-11-24 01:59:42] 2025-11-24 00:58:34,861 | INFO     | . log creation = 1 s
[2025-11-24 01:59:42] 2025-11-24 00:58:34,861 | INFO     | ..............................
[2025-11-24 01:59:42] 2025-11-24 00:58:34,987 | INFO     | 
[2025-11-24 01:59:42] 2025-11-24 00:58:34,988 | INFO     | job summary report
[2025-11-24 01:59:42] 2025-11-24 00:58:34,988 | INFO     | --------------------------------------------------
[2025-11-24 01:59:42] 2025-11-24 00:58:34,988 | INFO     | PanDA job id: 6893841636
[2025-11-24 01:59:42] 2025-11-24 00:58:34,988 | INFO     | task id: 47523449
[2025-11-24 01:59:42] 2025-11-24 00:58:34,988 | INFO     | errors: (none)
[2025-11-24 01:59:42] 2025-11-24 00:58:34,988 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 01:59:42] 2025-11-24 00:58:34,988 | INFO     | pilot state: finished 
[2025-11-24 01:59:42] 2025-11-24 00:58:34,989 | INFO     | transexitcode: 0
[2025-11-24 01:59:42] 2025-11-24 00:58:34,989 | INFO     | exeerrorcode: 0
[2025-11-24 01:59:42] 2025-11-24 00:58:34,989 | INFO     | exeerrordiag: 
[2025-11-24 01:59:42] 2025-11-24 00:58:34,989 | INFO     | exitcode: 0
[2025-11-24 01:59:42] 2025-11-24 00:58:34,989 | INFO     | exitmsg: OK
[2025-11-24 01:59:42] 2025-11-24 00:58:34,989 | INFO     | cpuconsumptiontime: 337719 s
[2025-11-24 01:59:42] 2025-11-24 00:58:34,989 | INFO     | nevents: 1000
[2025-11-24 01:59:42] 2025-11-24 00:58:34,989 | INFO     | neventsw: 0
[2025-11-24 01:59:42] 2025-11-24 00:58:34,989 | INFO     | pid: 16527
[2025-11-24 01:59:42] 2025-11-24 00:58:34,989 | INFO     | pgrp: 16527
[2025-11-24 01:59:42] 2025-11-24 00:58:34,989 | INFO     | corecount: 8
[2025-11-24 01:59:42] 2025-11-24 00:58:34,990 | INFO     | event service: False
[2025-11-24 01:59:42] 2025-11-24 00:58:34,990 | INFO     | sizes: {0: 2297973, 1: 2298659, 2: 2298858, 13: 2298858, 24: 2298914, 34: 2298942, 45: 2299098, 56: 2299126, 67: 2299154, 77: 2299182, 88: 2299238, 94: 2299808, 99
[2025-11-24 01:59:42] 2025-11-24 00:58:34,990 | INFO     | --------------------------------------------------
[2025-11-24 01:59:42] 2025-11-24 00:58:34,990 | INFO     | 
[2025-11-24 01:59:42] 2025-11-24 00:58:34,990 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2025-11-24 01:59:42] 2025-11-24 00:58:35,036 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 01:59:42] 2025-11-24 00:58:35,037 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 01:59:42] 2025-11-24 00:58:35,037 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 01:59:42] 2025-11-24 00:58:35,037 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 01:59:42] 2025-11-24 00:58:35,037 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 01:59:42] 2025-11-24 00:58:35,037 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 01:59:42] 2025-11-24 00:58:35,037 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 01:59:42] 2025-11-24 00:58:35,037 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 01:59:42] 2025-11-24 00:58:35,038 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 01:59:42] 2025-11-24 00:58:35,038 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 01:59:42] 2025-11-24 00:58:35,038 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 01:59:42] 2025-11-24 00:58:35,038 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 01:59:42] 2025-11-24 00:58:35,038 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 01:59:42] 2025-11-24 00:58:35,038 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 01:59:42] 2025-11-24 00:58:35,038 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 01:59:42] 2025-11-24 00:58:35,038 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 01:59:42] 2025-11-24 00:58:35,039 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 01:59:42] 2025-11-24 00:58:35,039 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 01:59:42] 2025-11-24 00:58:35,039 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 01:59:42] 2025-11-24 00:58:35,039 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 01:59:42] 2025-11-24 00:58:35,039 | INFO     | job 6893841636 has completed (purged errors)
[2025-11-24 01:59:42] 2025-11-24 00:58:35,039 | INFO     | overall cleanup function is called
[2025-11-24 01:59:42] 2025-11-24 00:58:36,060 | INFO     | --- collectZombieJob: --- 10, [16527]
[2025-11-24 01:59:42] 2025-11-24 00:58:36,060 | INFO     | zombie collector waiting for pid 16527
[2025-11-24 01:59:42] 2025-11-24 00:58:36,060 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 01:59:42] 2025-11-24 00:58:36,061 | INFO     | collected zombie processes
[2025-11-24 01:59:42] 2025-11-24 00:58:36,061 | INFO     | will attempt to kill all subprocesses of pid=16527
[2025-11-24 01:59:42] 2025-11-24 00:58:36,155 | INFO     | process IDs to be killed: [16527] (in reverse order)
[2025-11-24 01:59:42] 2025-11-24 00:58:36,257 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 01:59:42] 2025-11-24 00:58:36,258 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 01:59:42] 2025-11-24 00:58:36,262 | INFO     | did not find any defunct processes belonging to 16527
[2025-11-24 01:59:42] 2025-11-24 00:58:36,265 | INFO     | did not find any defunct processes belonging to 16527
[2025-11-24 01:59:42] 2025-11-24 00:58:36,283 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 01:59:42] 2025-11-24 00:58:36,283 | INFO     | ready for new job
[2025-11-24 01:59:42] 2025-11-24 00:58:36,283 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 01:59:42] 2025-11-24 00:58:36,291 | INFO     | ***************************************
[2025-11-24 01:59:42] 2025-11-24 00:58:36,291 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 01:59:42] 2025-11-24 00:58:36,291 | INFO     | ***************************************
[2025-11-24 01:59:42] 2025-11-24 00:58:36,292 | INFO     | 
[2025-11-24 01:59:42] 2025-11-24 00:58:36,293 | INFO     | pilot is running in a VM
[2025-11-24 01:59:42] 2025-11-24 00:58:36,293 | INFO     | architecture information:
[2025-11-24 01:59:42] 2025-11-24 00:58:36,295 | INFO     | executing command: cat /etc/os-release
[2025-11-24 01:59:42] 2025-11-24 00:58:36,328 | INFO     | cat /etc/os-release:
[2025-11-24 01:59:42] NAME="CentOS Linux"
[2025-11-24 01:59:42] VERSION="7 (Core)"
[2025-11-24 01:59:42] ID="centos"
[2025-11-24 01:59:42] ID_LIKE="rhel fedora"
[2025-11-24 01:59:42] VERSION_ID="7"
[2025-11-24 01:59:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 01:59:42] ANSI_COLOR="0;31"
[2025-11-24 01:59:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 01:59:42] HOME_URL="https://www.centos.org/"
[2025-11-24 01:59:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 01:59:42] 
[2025-11-24 01:59:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 01:59:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 01:59:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 01:59:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 01:59:42] 
[2025-11-24 01:59:42] 2025-11-24 00:58:36,329 | INFO     | ***************************************
[2025-11-24 01:59:42] 2025-11-24 00:58:36,833 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2025-11-24 01:59:42] 2025-11-24 00:58:36,862 | INFO     | sufficient remaining disk space (495122907136 B)
[2025-11-24 01:59:42] 2025-11-24 00:58:36,863 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 01:59:42] 2025-11-24 00:58:36,863 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 01:59:42] 2025-11-24 00:58:36,863 | INFO     | update_server=False
[2025-11-24 01:59:42] 2025-11-24 00:58:36,863 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 01:59:42] 2025-11-24 00:58:36,864 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 01:59:42] 2025-11-24 00:58:37,015 | INFO     | all data control threads have been joined
[2025-11-24 01:59:42] 2025-11-24 00:58:37,667 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 01:59:42] 2025-11-24 00:58:37,667 | INFO     | aborting loop
[2025-11-24 01:59:42] 2025-11-24 00:58:37,747 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 01:59:42] 2025-11-24 00:58:37,869 | INFO     | [job] queue monitor thread has finished
[2025-11-24 01:59:42] 2025-11-24 00:58:37,870 | INFO     | [job] retrieve thread has finished
[2025-11-24 01:59:42] 2025-11-24 00:58:38,021 | INFO     | [data] control thread has finished
[2025-11-24 01:59:42] 2025-11-24 00:58:38,123 | INFO     | [payload] failed_post thread has finished
[2025-11-24 01:59:42] 2025-11-24 00:58:38,254 | INFO     | all payload control threads have been joined
[2025-11-24 01:59:42] 2025-11-24 00:58:38,301 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 01:59:42] 2025-11-24 00:58:38,338 | INFO     | all job control threads have been joined
[2025-11-24 01:59:42] 2025-11-24 00:58:38,673 | INFO     | [job] job monitor thread has finished
[2025-11-24 01:59:42] 2025-11-24 00:58:39,099 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 01:59:42] 2025-11-24 00:58:39,116 | INFO     | [job] validate thread has finished
[2025-11-24 01:59:42] 2025-11-24 00:58:39,260 | INFO     | [payload] control thread has finished
[2025-11-24 01:59:42] 2025-11-24 00:58:39,299 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 01:59:42] 2025-11-24 00:58:39,344 | INFO     | [job] control thread has finished
[2025-11-24 01:59:42] 2025-11-24 00:58:39,349 | INFO     | [payload] validate_post thread has finished
[2025-11-24 01:59:42] 2025-11-24 00:58:39,353 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 01:59:42] 2025-11-24 00:58:39,357 | INFO     | [data] copytool_in thread has finished
[2025-11-24 01:59:42] 2025-11-24 00:58:40,308 | INFO     | [data] copytool_out thread has finished
[2025-11-24 01:59:42] 2025-11-24 00:58:41,755 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 01:59:42] 2025-11-24 00:58:47,115 | INFO     | job.realtimelogging is not enabled
[2025-11-24 01:59:42] 2025-11-24 00:58:48,121 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 01:59:42] 2025-11-24 00:59:06,566 | INFO     | PID=9895 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-24 01:59:42] 2025-11-24 00:59:06,566 | INFO     | .. there are 8 such processes running
[2025-11-24 01:59:42] 2025-11-24 00:59:06,566 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 01:59:42] 2025-11-24 00:59:06,567 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 01:59:42] 2025-11-24 00:59:06,567 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 01:59:42] 2025-11-24 00:59:33,962 | INFO     | [monitor] cgroup control has ended
[2025-11-24 01:59:42] 2025-11-24 00:59:34,312 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140031689549632)>', '<ExcThread(monitor, started 140031100450560)>']
[2025-11-24 01:59:42] 2025-11-24 00:59:34,734 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 01:59:42] 2025-11-24 00:59:34,734 | INFO     | [monitor] control thread has ended
[2025-11-24 01:59:42] 2025-11-24 00:59:39,338 | INFO     | all workflow threads have been joined
[2025-11-24 01:59:42] 2025-11-24 00:59:39,338 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 01:59:42] 2025-11-24 00:59:39,339 | INFO     | traces error code: 0
[2025-11-24 01:59:42] 2025-11-24 00:59:39,339 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 01:59:42] 2025-11-24 00:59:39,677 [wrapper] ==== pilot stdout END ====
[2025-11-24 01:59:42] 2025-11-24 00:59:39,773 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 01:59:42] 2025-11-24 00:59:39,872 [wrapper] pilotpid: 9895
[2025-11-24 01:59:42] 2025-11-24 00:59:39,975 [wrapper] Pilot exit status: 0
[2025-11-24 01:59:42] 2025-11-24 00:59:40,308 [wrapper] pandaids: 6893841636
[2025-11-24 01:59:42] 2025-11-24 00:59:40,675 [wrapper] cleanup supervisor_pilot 17246 9896
[2025-11-24 01:59:42] 2025-11-24 00:59:40,744 [wrapper] Test setup, not cleaning
[2025-11-24 01:59:42] 2025-11-24 00:59:40,855 [wrapper] apfmon messages muted
[2025-11-24 01:59:42] 2025-11-24 00:59:40,928 [wrapper] ==== wrapper stdout END ====
[2025-11-24 01:59:42] 2025-11-24 00:59:41,004 [wrapper] ==== wrapper stderr END ====
[2025-11-24 01:59:42]  *** Error codes and diagnostics ***
[2025-11-24 01:59:42]     "exeErrorCode": 0,
[2025-11-24 01:59:42]     "exeErrorDiag": "",
[2025-11-24 01:59:42]     "pilotErrorCode": 0,
[2025-11-24 01:59:42]     "pilotErrorDiag": "",
[2025-11-24 01:59:42]  *** Listing of results directory ***
[2025-11-24 01:59:42] total 1321384
[2025-11-24 01:59:42] -rw-r--r--. 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-24 01:59:42] -rwx------. 1 boinc boinc     36292 Nov 20 11:17 runpilot2-wrapper.sh
[2025-11-24 01:59:42] -rw-r--r--. 1 boinc boinc      5112 Nov 20 11:17 queuedata.json
[2025-11-24 01:59:42] -rw-r--r--. 1 boinc boinc       100 Nov 23 00:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 01:59:42] -rwxr-xr-x. 1 boinc boinc      7986 Nov 23 00:13 run_atlas
[2025-11-24 01:59:42] -rw-r--r--. 1 boinc boinc       105 Nov 23 00:13 job.xml
[2025-11-24 01:59:42] -rw-r--r--. 2 boinc boinc 408254021 Nov 23 00:13 EVNT.47493127._000185.pool.root.1
[2025-11-24 01:59:42] -rw-r--r--. 1 boinc boinc      6393 Nov 23 00:13 init_data.xml
[2025-11-24 01:59:42] -rw-r--r--. 2 boinc boinc     15847 Nov 23 00:13 start_atlas.sh
[2025-11-24 01:59:42] drwxrwx--x. 2 boinc boinc        68 Nov 23 00:13 shared
[2025-11-24 01:59:42] -rw-r--r--. 2 boinc boinc    590100 Nov 23 00:13 input.tar.gz
[2025-11-24 01:59:42] -rw-r--r--. 1 boinc boinc         0 Nov 23 00:13 boinc_lockfile
[2025-11-24 01:59:42] -rw-r--r--. 1 boinc boinc      2783 Nov 23 00:13 pandaJob.out
[2025-11-24 01:59:42] -rw-------. 1 boinc boinc    989784 Nov 23 00:17 agis_schedconf.cvmfs.json
[2025-11-24 01:59:42] drwx------. 5 boinc boinc      4096 Nov 23 00:17 pilot3
[2025-11-24 01:59:42] -rw-r--r--. 1 boinc boinc       533 Nov 24 01:32 boinc_task_state.xml
[2025-11-24 01:59:42] -rw-------. 1 boinc boinc 911046999 Nov 24 01:57 HITS.47523449._001841.pool.root.1
[2025-11-24 01:59:42] -rw-------. 1 boinc boinc      1031 Nov 24 01:58 memory_monitor_summary.json
[2025-11-24 01:59:42] -rw-------. 1 boinc boinc   1526164 Nov 24 01:58 agis_ddmendpoints.agis.ALL.json
[2025-11-24 01:59:42] -rw-------. 1 boinc boinc   2588497 Nov 24 01:58 log.47523449._001841.job.log.tgz.1
[2025-11-24 01:59:42] -rw-------. 1 boinc boinc        95 Nov 24 01:58 pilot_heartbeat.json
[2025-11-24 01:59:42] -rw-------. 1 boinc boinc      8624 Nov 24 01:58 heartbeat.json
[2025-11-24 01:59:42] -rw-r--r--. 1 boinc boinc      8192 Nov 24 01:59 boinc_mmap_file
[2025-11-24 01:59:42] -rw-r--r--. 1 boinc boinc        29 Nov 24 01:59 wrapper_checkpoint.txt
[2025-11-24 01:59:42] -rw-------. 1 boinc boinc      4956 Nov 24 01:59 pilotlog.txt
[2025-11-24 01:59:42] -rw-------. 1 boinc boinc  12356110 Nov 24 01:59 log.47523449._001841.job.log.1
[2025-11-24 01:59:42] -rw-------. 1 boinc boinc       353 Nov 24 01:59 output.list
[2025-11-24 01:59:42] -rw-r--r--. 1 boinc boinc       620 Nov 24 01:59 runtime_log
[2025-11-24 01:59:42] -rw-------. 1 boinc boinc  14960640 Nov 24 01:59 result.tar.gz
[2025-11-24 01:59:42] -rw-r--r--. 1 boinc boinc      8833 Nov 24 01:59 runtime_log.err
[2025-11-24 01:59:42] -rw-------. 1 boinc boinc       662 Nov 24 01:59 jGbLDmhuGg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqKGKDmb8azpm.diag
[2025-11-24 01:59:42] -rw-r--r--. 1 boinc boinc     21483 Nov 24 01:59 stderr.txt
[2025-11-24 01:59:42] HITS file was successfully produced:
[2025-11-24 01:59:42] -rw-------. 1 boinc boinc 911046999 Nov 24 01:57 shared/HITS.pool.root.1
[2025-11-24 01:59:42]  *** Contents of shared directory: ***
[2025-11-24 01:59:42] total 1303592
[2025-11-24 01:59:42] -rw-r--r--. 2 boinc boinc 408254021 Nov 23 00:13 ATLAS.root_0
[2025-11-24 01:59:42] -rw-r--r--. 2 boinc boinc     15847 Nov 23 00:13 start_atlas.sh
[2025-11-24 01:59:42] -rw-r--r--. 2 boinc boinc    590100 Nov 23 00:13 input.tar.gz
[2025-11-24 01:59:42] -rw-------. 1 boinc boinc 911046999 Nov 24 01:57 HITS.pool.root.1
[2025-11-24 01:59:42] -rw-------. 1 boinc boinc  14960640 Nov 24 01:59 result.tar.gz
01:59:44 (6046): run_atlas exited; CPU time 338180.117357
01:59:44 (6046): called boinc_finish(0)

</stderr_txt>
]]>

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