Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:02:23 (2081137): wrapper (7.7.26015): starting
06:02:23 (2081137): wrapper: running run_atlas (--nthreads 12)
[2025-11-20 06:02:23] Arguments: --nthreads 12
[2025-11-20 06:02:23] Threads: 12
[2025-11-20 06:02:23] Checking for CVMFS
[2025-11-20 06:02:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 06:02:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 06:02:27] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 06:02:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 06:02:28] 2.8.1.0 2081356 0 30200 153078 3 1 3321229 4096000 0 130560 0 0 0.000 1292 563 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-20 06:02:28] CVMFS is ok
[2025-11-20 06:02:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 06:02:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 06:02:28] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-20 06:02:28] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-20 06:02:28] Further information can be found at the LHC@home message board.
[2025-11-20 06:02:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 06:02:28] Checking for apptainer binary...
[2025-11-20 06:02:28] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-11-20 06:02:28] apptainer is not installed, using version from CVMFS
[2025-11-20 06:02:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 06:02:28] farmville.blisteringsheep.pec
[2025-11-20 06:02:28] apptainer works
[2025-11-20 06:02:28] Set ATHENA_PROC_NUMBER=12
[2025-11-20 06:02:28] Set ATHENA_CORE_NUMBER=12
[2025-11-20 06:02:29] Starting ATLAS job with PandaID=6893838328
[2025-11-20 06:02:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 09:53:27]  *** The last 200 lines of the pilot log: ***
[2025-11-20 09:53:27] 2025-11-20 14:52:52,242 | INFO     | number of running child processes to parent process 2093194: 1
[2025-11-20 09:53:27] 2025-11-20 14:52:52,242 | INFO     | maximum number of monitored processes: 17
[2025-11-20 09:53:27] 2025-11-20 14:52:53,623 | INFO     | time since job start (13806s) is within the limit (172800.0s)
[2025-11-20 09:53:27] 2025-11-20 14:52:54,393 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-20 09:53:27] 2025-11-20 14:52:54,396 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2547.112229166667
[2025-11-20 09:53:27] 2025-11-20 14:52:54,400 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6893838328/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 09:53:27] 2025-11-20 14:52:54,401 | INFO     | extracted standard info from prmon json
[2025-11-20 09:53:27] 2025-11-20 14:52:54,401 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 09:53:27] 2025-11-20 14:52:54,401 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 09:53:27] 2025-11-20 14:52:54,403 | INFO     | fitting pss+swap vs Time
[2025-11-20 09:53:27] 2025-11-20 14:52:54,403 | INFO     | sum of square deviations: 3578932001.362839
[2025-11-20 09:53:27] 2025-11-20 14:52:54,404 | INFO     | sum of deviations: 135478848136.8406
[2025-11-20 09:53:27] 2025-11-20 14:52:54,404 | INFO     | mean x: 1763643453.9469028
[2025-11-20 09:53:27] 2025-11-20 14:52:54,404 | INFO     | mean y: 3466903.4867256638
[2025-11-20 09:53:27] 2025-11-20 14:52:54,404 | INFO     | intersect: -66758456366.868706
[2025-11-20 09:53:27] 2025-11-20 14:52:54,405 | INFO     | chi2: 4.555921510864952
[2025-11-20 09:53:27] 2025-11-20 14:52:54,405 | INFO     | sum of square deviations: 3346614262.841614
[2025-11-20 09:53:27] 2025-11-20 14:52:54,406 | INFO     | sum of deviations: 204924468417.3303
[2025-11-20 09:53:27] 2025-11-20 14:52:54,406 | INFO     | mean x: 1763643301.4570136
[2025-11-20 09:53:27] 2025-11-20 14:52:54,406 | INFO     | mean y: 3512251.561085973
[2025-11-20 09:53:27] 2025-11-20 14:52:54,406 | INFO     | intersect: -107990310054.6844
[2025-11-20 09:53:27] 2025-11-20 14:52:54,406 | INFO     | chi2: 2.17618849054656
[2025-11-20 09:53:27] 2025-11-20 14:52:54,406 | INFO     | current chi2=2.17618849054656 (change=52.233845878231435 %)
[2025-11-20 09:53:27] 2025-11-20 14:52:54,406 | INFO     | sum of square deviations: 3124548702.625009
[2025-11-20 09:53:27] 2025-11-20 14:52:54,407 | INFO     | sum of deviations: 196922204368.2914
[2025-11-20 09:53:27] 2025-11-20 14:52:54,407 | INFO     | mean x: 1763643148.9583333
[2025-11-20 09:53:27] 2025-11-20 14:52:54,407 | INFO     | mean y: 3506741.699074074
[2025-11-20 09:53:27] 2025-11-20 14:52:54,407 | INFO     | intersect: -111148704238.44482
[2025-11-20 09:53:27] 2025-11-20 14:52:54,407 | INFO     | chi2: 2.170865569431737
[2025-11-20 09:53:27] 2025-11-20 14:52:54,408 | INFO     | current chi2=2.170865569431737 (change=0.24459834880783946 %)
[2025-11-20 09:53:27] 2025-11-20 14:52:54,408 | INFO     | right removable region: 215
[2025-11-20 09:53:27] 2025-11-20 14:52:54,408 | INFO     | sum of square deviations: 3346566194.7511263
[2025-11-20 09:53:27] 2025-11-20 14:52:54,409 | INFO     | sum of deviations: 66160223950.86876
[2025-11-20 09:53:27] 2025-11-20 14:52:54,409 | INFO     | mean x: 1763643606.4524887
[2025-11-20 09:53:27] 2025-11-20 14:52:54,409 | INFO     | mean y: 3512107.511312217
[2025-11-20 09:53:27] 2025-11-20 14:52:54,409 | INFO     | intersect: -34862989608.61322
[2025-11-20 09:53:27] 2025-11-20 14:52:54,409 | INFO     | chi2: 2.4977972528212247
[2025-11-20 09:53:27] 2025-11-20 14:52:54,409 | INFO     | current chi2=2.4977972528212247 (change=45.17470841267824 %)
[2025-11-20 09:53:27] 2025-11-20 14:52:54,409 | INFO     | sum of square deviations: 3124506734.439825
[2025-11-20 09:53:27] 2025-11-20 14:52:54,410 | INFO     | sum of deviations: 50072998874.02315
[2025-11-20 09:53:27] 2025-11-20 14:52:54,410 | INFO     | mean x: 1763643758.949074
[2025-11-20 09:53:27] 2025-11-20 14:52:54,410 | INFO     | mean y: 3523128.3657407407
[2025-11-20 09:53:27] 2025-11-20 14:52:54,410 | INFO     | intersect: -28260436421.674305
[2025-11-20 09:53:27] 2025-11-20 14:52:54,410 | INFO     | chi2: 2.4586382546735885
[2025-11-20 09:53:27] 2025-11-20 14:52:54,410 | INFO     | current chi2=2.4586382546735885 (change=1.567741260961298 %)
[2025-11-20 09:53:27] 2025-11-20 14:52:54,411 | INFO     | left removable region: 20
[2025-11-20 09:53:27] 2025-11-20 14:52:54,411 | INFO     | sum of square deviations: 2298910098.0718055
[2025-11-20 09:53:27] 2025-11-20 14:52:54,411 | INFO     | sum of deviations: 90356462367.92303
[2025-11-20 09:53:27] 2025-11-20 14:52:54,411 | INFO     | mean x: 1763643728.4410257
[2025-11-20 09:53:27] 2025-11-20 14:52:54,411 | INFO     | mean y: 3583731.3846153845
[2025-11-20 09:53:27] 2025-11-20 14:52:54,412 | INFO     | intersect: -69314745990.58417
[2025-11-20 09:53:27] 2025-11-20 14:52:54,412 | INFO     | chi2: 0.014685197963220495
[2025-11-20 09:53:27] 2025-11-20 14:52:54,412 | INFO     | current memory leak: 39.30 B/s (using 195 data points, chi2=0.01)
[2025-11-20 09:53:27] 2025-11-20 14:52:54,412 | INFO     | could have reported an average CPU frequency of 2714 MHz (11 samples)
[2025-11-20 09:53:27] 2025-11-20 14:52:54,412 | INFO     | ..............................
[2025-11-20 09:53:27] 2025-11-20 14:52:54,412 | INFO     | . Timing measurements:
[2025-11-20 09:53:27] 2025-11-20 14:52:54,412 | INFO     | . get job = 0 s
[2025-11-20 09:53:27] 2025-11-20 14:52:54,412 | INFO     | . initial setup = 3 s
[2025-11-20 09:53:27] 2025-11-20 14:52:54,412 | INFO     | . payload setup = 5 s
[2025-11-20 09:53:27] 2025-11-20 14:52:54,412 | INFO     | . stage-in = 0 s
[2025-11-20 09:53:27] 2025-11-20 14:52:54,413 | INFO     | . payload execution = 13775 s
[2025-11-20 09:53:27] 2025-11-20 14:52:54,413 | INFO     | . stage-out = 3 s
[2025-11-20 09:53:27] 2025-11-20 14:52:54,413 | INFO     | . log creation = 0 s
[2025-11-20 09:53:27] 2025-11-20 14:52:54,413 | INFO     | ..............................
[2025-11-20 09:53:27] 2025-11-20 14:52:54,459 | INFO     | 
[2025-11-20 09:53:27] 2025-11-20 14:52:54,460 | INFO     | job summary report
[2025-11-20 09:53:27] 2025-11-20 14:52:54,460 | INFO     | --------------------------------------------------
[2025-11-20 09:53:27] 2025-11-20 14:52:54,460 | INFO     | PanDA job id: 6893838328
[2025-11-20 09:53:27] 2025-11-20 14:52:54,460 | INFO     | task id: 47523449
[2025-11-20 09:53:27] 2025-11-20 14:52:54,460 | INFO     | errors: (none)
[2025-11-20 09:53:27] 2025-11-20 14:52:54,460 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 09:53:27] 2025-11-20 14:52:54,460 | INFO     | pilot state: finished 
[2025-11-20 09:53:27] 2025-11-20 14:52:54,460 | INFO     | transexitcode: 0
[2025-11-20 09:53:27] 2025-11-20 14:52:54,460 | INFO     | exeerrorcode: 0
[2025-11-20 09:53:27] 2025-11-20 14:52:54,460 | INFO     | exeerrordiag: 
[2025-11-20 09:53:27] 2025-11-20 14:52:54,460 | INFO     | exitcode: 0
[2025-11-20 09:53:27] 2025-11-20 14:52:54,460 | INFO     | exitmsg: OK
[2025-11-20 09:53:27] 2025-11-20 14:52:54,460 | INFO     | cpuconsumptiontime: 160390 s
[2025-11-20 09:53:27] 2025-11-20 14:52:54,460 | INFO     | nevents: 1000
[2025-11-20 09:53:27] 2025-11-20 14:52:54,460 | INFO     | neventsw: 0
[2025-11-20 09:53:27] 2025-11-20 14:52:54,460 | INFO     | pid: 2093194
[2025-11-20 09:53:27] 2025-11-20 14:52:54,460 | INFO     | pgrp: 2093194
[2025-11-20 09:53:27] 2025-11-20 14:52:54,460 | INFO     | corecount: 12
[2025-11-20 09:53:27] 2025-11-20 14:52:54,461 | INFO     | event service: False
[2025-11-20 09:53:27] 2025-11-20 14:52:54,461 | INFO     | sizes: {0: 2297211, 5: 2297473, 11: 2297529, 13784: 2328826, 13788: 2339472, 13792: 2339662}
[2025-11-20 09:53:27] 2025-11-20 14:52:54,461 | INFO     | --------------------------------------------------
[2025-11-20 09:53:27] 2025-11-20 14:52:54,461 | INFO     | 
[2025-11-20 09:53:27] 2025-11-20 14:52:54,461 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-11-20 09:53:27] 2025-11-20 14:52:54,473 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 09:53:27] 2025-11-20 14:52:54,473 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 09:53:27] 2025-11-20 14:52:54,474 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 09:53:27] 2025-11-20 14:52:54,474 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 09:53:27] 2025-11-20 14:52:54,474 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 09:53:27] 2025-11-20 14:52:54,474 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 09:53:27] 2025-11-20 14:52:54,474 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 09:53:27] 2025-11-20 14:52:54,474 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 09:53:27] 2025-11-20 14:52:54,474 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 09:53:27] 2025-11-20 14:52:54,474 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 09:53:27] 2025-11-20 14:52:54,474 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 09:53:27] 2025-11-20 14:52:54,474 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 09:53:27] 2025-11-20 14:52:54,474 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 09:53:27] 2025-11-20 14:52:54,474 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 09:53:27] 2025-11-20 14:52:54,474 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 09:53:27] 2025-11-20 14:52:54,475 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 09:53:27] 2025-11-20 14:52:54,475 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 09:53:27] 2025-11-20 14:52:54,475 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 09:53:27] 2025-11-20 14:52:54,475 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 09:53:27] 2025-11-20 14:52:54,475 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 09:53:27] 2025-11-20 14:52:54,475 | INFO     | job 6893838328 has completed (purged errors)
[2025-11-20 09:53:27] 2025-11-20 14:52:54,475 | INFO     | overall cleanup function is called
[2025-11-20 09:53:27] 2025-11-20 14:52:55,488 | INFO     | --- collectZombieJob: --- 10, [2093194]
[2025-11-20 09:53:27] 2025-11-20 14:52:55,488 | INFO     | zombie collector waiting for pid 2093194
[2025-11-20 09:53:27] 2025-11-20 14:52:55,488 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 09:53:27] 2025-11-20 14:52:55,488 | INFO     | collected zombie processes
[2025-11-20 09:53:27] 2025-11-20 14:52:55,488 | INFO     | will attempt to kill all subprocesses of pid=2093194
[2025-11-20 09:53:27] 2025-11-20 14:52:55,642 | INFO     | process IDs to be killed: [2093194] (in reverse order)
[2025-11-20 09:53:27] 2025-11-20 14:52:55,680 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 09:53:27] 2025-11-20 14:52:55,680 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 09:53:27] 2025-11-20 14:52:55,684 | INFO     | did not find any defunct processes belonging to 2093194
[2025-11-20 09:53:27] 2025-11-20 14:52:55,687 | INFO     | did not find any defunct processes belonging to 2093194
[2025-11-20 09:53:27] 2025-11-20 14:52:55,688 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 09:53:27] 2025-11-20 14:52:55,688 | INFO     | ready for new job
[2025-11-20 09:53:27] 2025-11-20 14:52:55,688 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 09:53:27] 2025-11-20 14:52:55,690 | INFO     | ***************************************
[2025-11-20 09:53:27] 2025-11-20 14:52:55,690 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 09:53:27] 2025-11-20 14:52:55,690 | INFO     | ***************************************
[2025-11-20 09:53:27] 2025-11-20 14:52:55,690 | INFO     | 
[2025-11-20 09:53:27] 2025-11-20 14:52:55,692 | INFO     | architecture information:
[2025-11-20 09:53:27] 2025-11-20 14:52:55,692 | INFO     | executing command: cat /etc/os-release
[2025-11-20 09:53:27] 2025-11-20 14:52:55,702 | INFO     | cat /etc/os-release:
[2025-11-20 09:53:27] NAME="CentOS Linux"
[2025-11-20 09:53:27] VERSION="7 (Core)"
[2025-11-20 09:53:27] ID="centos"
[2025-11-20 09:53:27] ID_LIKE="rhel fedora"
[2025-11-20 09:53:27] VERSION_ID="7"
[2025-11-20 09:53:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 09:53:27] ANSI_COLOR="0;31"
[2025-11-20 09:53:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 09:53:27] HOME_URL="https://www.centos.org/"
[2025-11-20 09:53:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 09:53:27] 
[2025-11-20 09:53:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 09:53:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 09:53:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 09:53:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 09:53:27] 
[2025-11-20 09:53:27] 2025-11-20 14:52:55,702 | INFO     | ***************************************
[2025-11-20 09:53:27] 2025-11-20 14:52:56,205 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-11-20 09:53:27] 2025-11-20 14:52:56,214 | INFO     | sufficient remaining disk space (343525031936 B)
[2025-11-20 09:53:27] 2025-11-20 14:52:56,214 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 09:53:27] 2025-11-20 14:52:56,214 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 09:53:27] 2025-11-20 14:52:56,214 | INFO     | update_server=False
[2025-11-20 09:53:27] 2025-11-20 14:52:56,215 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 09:53:27] 2025-11-20 14:52:56,215 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 09:53:27] 2025-11-20 14:52:56,215 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 09:53:27] 2025-11-20 14:52:56,215 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 09:53:27] 2025-11-20 14:52:56,215 | INFO     | aborting loop
[2025-11-20 09:53:27] 2025-11-20 14:52:56,456 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 09:53:27] 2025-11-20 14:52:56,568 | INFO     | all data control threads have been joined
[2025-11-20 09:53:27] 2025-11-20 14:52:57,107 | INFO     | all payload control threads have been joined
[2025-11-20 09:53:27] 2025-11-20 14:52:57,215 | INFO     | [job] retrieve thread has finished
[2025-11-20 09:53:27] 2025-11-20 14:52:57,220 | INFO     | [job] queue monitor thread has finished
[2025-11-20 09:53:27] 2025-11-20 14:52:57,221 | INFO     | [job] job monitor thread has finished
[2025-11-20 09:53:27] 2025-11-20 14:52:57,423 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 09:53:27] 2025-11-20 14:52:57,486 | INFO     | all job control threads have been joined
[2025-11-20 09:53:27] 2025-11-20 14:52:57,574 | INFO     | [data] control thread has finished
[2025-11-20 09:53:27] 2025-11-20 14:52:57,591 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 09:53:27] 2025-11-20 14:52:57,820 | INFO     | [job] validate thread has finished
[2025-11-20 09:53:27] 2025-11-20 14:52:58,018 | INFO     | [data] copytool_in thread has finished
[2025-11-20 09:53:27] 2025-11-20 14:52:58,042 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 09:53:27] 2025-11-20 14:52:58,097 | INFO     | [payload] failed_post thread has finished
[2025-11-20 09:53:27] 2025-11-20 14:52:58,113 | INFO     | [payload] control thread has finished
[2025-11-20 09:53:27] 2025-11-20 14:52:58,220 | INFO     | [data] copytool_out thread has finished
[2025-11-20 09:53:27] 2025-11-20 14:52:58,237 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 09:53:27] 2025-11-20 14:52:58,492 | INFO     | [job] control thread has finished
[2025-11-20 09:53:27] 2025-11-20 14:52:58,724 | INFO     | [payload] validate_post thread has finished
[2025-11-20 09:53:27] 2025-11-20 14:53:00,459 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 09:53:27] 2025-11-20 14:53:07,890 | INFO     | [monitor] cgroup control has ended
[2025-11-20 09:53:27] 2025-11-20 14:53:09,442 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139798813501248)>', '<ExcThread(monitor, started 139798257837824)>']
[2025-11-20 09:53:27] 2025-11-20 14:53:14,467 | INFO     | all workflow threads have been joined
[2025-11-20 09:53:27] 2025-11-20 14:53:14,468 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 09:53:27] 2025-11-20 14:53:14,468 | INFO     | traces error code: 0
[2025-11-20 09:53:27] 2025-11-20 14:53:14,468 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 09:53:27] 2025-11-20 14:53:26,889 | INFO     | PID=2085966 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-20 09:53:27] 2025-11-20 14:53:26,890 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 09:53:27] 2025-11-20 14:53:26,890 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 09:53:27] 2025-11-20 14:53:26,890 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 09:53:27] 2025-11-20 14:53:26,890 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 09:53:27] 2025-11-20 14:53:26,890 | CRITICAL | thread 'MainThread' is not alive
[2025-11-20 09:53:27] 2025-11-20 14:53:26,890 | INFO     | [monitor] control thread has ended
[2025-11-20 09:53:27] 2025-11-20 14:53:27,003 [wrapper] ==== pilot stdout END ====
[2025-11-20 09:53:27] 2025-11-20 14:53:27,006 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 09:53:27] 2025-11-20 14:53:27,007 [wrapper] pilotpid: 2085966
[2025-11-20 09:53:27] 2025-11-20 14:53:27,009 [wrapper] Pilot exit status: 0
[2025-11-20 09:53:27] 2025-11-20 14:53:27,016 [wrapper] pandaids: 6893838328
[2025-11-20 09:53:27] 2025-11-20 14:53:27,047 [wrapper] cleanup supervisor_pilot 2384986 2085967
[2025-11-20 09:53:27] 2025-11-20 14:53:27,049 [wrapper] Test setup, not cleaning
[2025-11-20 09:53:27] 2025-11-20 14:53:27,051 [wrapper] apfmon messages muted
[2025-11-20 09:53:27] 2025-11-20 14:53:27,053 [wrapper] ==== wrapper stdout END ====
[2025-11-20 09:53:27] 2025-11-20 14:53:27,054 [wrapper] ==== wrapper stderr END ====
[2025-11-20 09:53:27]  *** Error codes and diagnostics ***
[2025-11-20 09:53:27]     "exeErrorCode": 0,
[2025-11-20 09:53:27]     "exeErrorDiag": "",
[2025-11-20 09:53:27]     "pilotErrorCode": 0,
[2025-11-20 09:53:27]     "pilotErrorDiag": "",
[2025-11-20 09:53:27]  *** Listing of results directory ***
[2025-11-20 09:53:27] total 1295956
[2025-11-20 09:53:27] -rw-r--r-- 1 boinc boinc    576529 Nov 20 05:06 pilot3.tar.gz
[2025-11-20 09:53:27] -rwx------ 1 boinc boinc     36292 Nov 20 05:17 runpilot2-wrapper.sh
[2025-11-20 09:53:27] -rw-r--r-- 1 boinc boinc      5112 Nov 20 05:17 queuedata.json
[2025-11-20 09:53:27] -rw-r--r-- 1 boinc boinc       100 Nov 20 06:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 09:53:27] -rwxr-xr-x 1 boinc boinc      7986 Nov 20 06:02 run_atlas
[2025-11-20 09:53:27] -rw-r--r-- 1 boinc boinc       105 Nov 20 06:02 job.xml
[2025-11-20 09:53:27] -rw-r--r-- 2 boinc boinc 408925233 Nov 20 06:02 EVNT.47493127._000131.pool.root.1
[2025-11-20 09:53:27] drwxrwx--x 1 boinc boinc        76 Nov 20 06:02 shared
[2025-11-20 09:53:27] -rw-r--r-- 2 boinc boinc    590101 Nov 20 06:02 input.tar.gz
[2025-11-20 09:53:27] -rw-r--r-- 2 boinc boinc     15847 Nov 20 06:02 start_atlas.sh
[2025-11-20 09:53:27] -rw-r--r-- 1 boinc boinc         0 Nov 20 06:02 boinc_setup_complete
[2025-11-20 09:53:27] -rw-r--r-- 1 boinc boinc      9256 Nov 20 06:02 init_data.xml
[2025-11-20 09:53:27] -rw-r--r-- 1 boinc boinc         0 Nov 20 06:02 boinc_lockfile
[2025-11-20 09:53:27] -rw-r--r-- 1 boinc boinc      2786 Nov 20 06:02 pandaJob.out
[2025-11-20 09:53:27] -rw------- 1 boinc boinc    989443 Nov 20 06:02 agis_schedconf.cvmfs.json
[2025-11-20 09:53:27] drwx------ 1 boinc boinc       414 Nov 20 06:02 pilot3
[2025-11-20 09:53:27] -rw-r--r-- 1 boinc boinc       532 Nov 20 09:46 boinc_task_state.xml
[2025-11-20 09:53:27] -rw------- 1 boinc boinc 906322625 Nov 20 09:52 HITS.47523449._001309.pool.root.1
[2025-11-20 09:53:27] -rw------- 1 boinc boinc      1062 Nov 20 09:52 memory_monitor_summary.json
[2025-11-20 09:53:27] -rw------- 1 boinc boinc   1526164 Nov 20 09:52 agis_ddmendpoints.agis.ALL.json
[2025-11-20 09:53:27] -rw------- 1 boinc boinc   2021122 Nov 20 09:52 log.47523449._001309.job.log.tgz.1
[2025-11-20 09:53:27] -rw------- 1 boinc boinc      8639 Nov 20 09:52 heartbeat.json
[2025-11-20 09:53:27] -rw-r--r-- 1 boinc boinc        29 Nov 20 09:53 wrapper_checkpoint.txt
[2025-11-20 09:53:27] -rw-r--r-- 1 boinc boinc      8192 Nov 20 09:53 boinc_mmap_file
[2025-11-20 09:53:27] -rw------- 1 boinc boinc       817 Nov 20 09:53 pilotlog.txt
[2025-11-20 09:53:27] -rw------- 1 boinc boinc        95 Nov 20 09:53 pilot_heartbeat.json
[2025-11-20 09:53:27] -rw------- 1 boinc boinc   1932871 Nov 20 09:53 log.47523449._001309.job.log.1
[2025-11-20 09:53:27] -rw------- 1 boinc boinc       353 Nov 20 09:53 output.list
[2025-11-20 09:53:27] -rw-r--r-- 1 boinc boinc       620 Nov 20 09:53 runtime_log
[2025-11-20 09:53:27] -rw------- 1 boinc boinc   3973120 Nov 20 09:53 result.tar.gz
[2025-11-20 09:53:27] -rw-r--r-- 1 boinc boinc      8905 Nov 20 09:53 runtime_log.err
[2025-11-20 09:53:27] -rw------- 1 boinc boinc       679 Nov 20 09:53 k54KDmhuGg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSKGKDmK4n3Yn.diag
[2025-11-20 09:53:27] -rw-r--r-- 1 boinc boinc     21567 Nov 20 09:53 stderr.txt
[2025-11-20 09:53:27] HITS file was successfully produced:
[2025-11-20 09:53:27] -rw------- 1 boinc boinc 906322625 Nov 20 09:52 shared/HITS.pool.root.1
[2025-11-20 09:53:27]  *** Contents of shared directory: ***
[2025-11-20 09:53:27] total 1288904
[2025-11-20 09:53:27] -rw-r--r-- 2 boinc boinc 408925233 Nov 20 06:02 ATLAS.root_0
[2025-11-20 09:53:27] -rw-r--r-- 2 boinc boinc    590101 Nov 20 06:02 input.tar.gz
[2025-11-20 09:53:27] -rw-r--r-- 2 boinc boinc     15847 Nov 20 06:02 start_atlas.sh
[2025-11-20 09:53:27] -rw------- 1 boinc boinc 906322625 Nov 20 09:52 HITS.pool.root.1
[2025-11-20 09:53:27] -rw------- 1 boinc boinc   3973120 Nov 20 09:53 result.tar.gz
09:53:28 (2081137): run_atlas exited; CPU time 160347.465840
09:53:28 (2081137): called boinc_finish(0)

</stderr_txt>
]]>

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