Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:54:55 (2818222): wrapper (7.7.26015): starting
03:54:55 (2818222): wrapper: running run_atlas (--nthreads 8)
[2025-11-21 03:54:55] Arguments: --nthreads 8
[2025-11-21 03:54:55] Threads: 8
[2025-11-21 03:54:55] Checking for CVMFS
[2025-11-21 03:54:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 03:54:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 03:54:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 03:54:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 03:54:57] 2.13.2.0 5745 26317 176116 153114 2 141 22021020 39288832 5118 16776704 0 13501907 99.530 14079006 35898 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 03:54:57] CVMFS is ok
[2025-11-21 03:54:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 03:54:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 03:54:57] Further information can be found at the LHC@home message board.
[2025-11-21 03:54:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 03:54:57] Checking for apptainer binary...
[2025-11-21 03:54:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 03:54:57] Running /usr/bin/apptainer --version
[2025-11-21 03:54:57] apptainer version 1.4.4-1.el9
[2025-11-21 03:54:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 03:54:58] c-211-4.aglt2.org
[2025-11-21 03:54:58] apptainer works
[2025-11-21 03:54:58] Set ATHENA_PROC_NUMBER=8
[2025-11-21 03:54:58] Set ATHENA_CORE_NUMBER=8
[2025-11-21 03:54:58] Starting ATLAS job with PandaID=6893838324
[2025-11-21 03:54:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 21:03:58]  *** The last 200 lines of the pilot log: ***
[2025-11-21 21:03:58] 2025-11-22 02:02:41,712 | INFO     | time since job start (61608s) is within the limit (172800.0s)
[2025-11-21 21:03:58] 2025-11-22 02:02:42,666 | INFO     | monitor loop #3954: job 0:6893838324 is in state 'finished'
[2025-11-21 21:03:58] 2025-11-22 02:02:42,667 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 21:03:58] 2025-11-22 02:02:43,719 | INFO     | time since job start (61610s) is within the limit (172800.0s)
[2025-11-21 21:03:58] 2025-11-22 02:02:45,281 | INFO     | monitor loop #3955: job 0:6893838324 is in state 'finished'
[2025-11-21 21:03:58] 2025-11-22 02:02:45,281 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 21:03:58] 2025-11-22 02:02:47,871 | INFO     | monitor loop #3956: job 0:6893838324 is in state 'finished'
[2025-11-21 21:03:58] 2025-11-22 02:02:47,876 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 21:03:58] 2025-11-22 02:02:49,266 | INFO     | PID=2822508 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 21:03:58] 2025-11-22 02:02:49,292 | INFO     | .. there are 9 such processes running
[2025-11-21 21:03:58] 2025-11-22 02:02:50,293 | INFO     | time since job start (61617s) is within the limit (172800.0s)
[2025-11-21 21:03:58] 2025-11-22 02:02:50,381 | INFO     | monitor loop #3957: job 0:6893838324 is in state 'finished'
[2025-11-21 21:03:58] 2025-11-22 02:02:50,381 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 21:03:58] 2025-11-22 02:02:52,300 | INFO     | time since job start (61619s) is within the limit (172800.0s)
[2025-11-21 21:03:58] 2025-11-22 02:02:52,333 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 21:03:58] 2025-11-22 02:02:52,339 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.157075
[2025-11-21 21:03:58] 2025-11-22 02:02:52,354 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893838324/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 21:03:58] 2025-11-22 02:02:52,355 | INFO     | extracted standard info from prmon json
[2025-11-21 21:03:58] 2025-11-22 02:02:52,355 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 21:03:58] 2025-11-22 02:02:52,355 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 21:03:58] 2025-11-22 02:02:52,588 | INFO     | fitting pss+swap vs Time
[2025-11-21 21:03:58] 2025-11-22 02:02:52,631 | INFO     | sum of square deviations: 316742656324.80383
[2025-11-21 21:03:58] 2025-11-22 02:02:52,865 | INFO     | sum of deviations: 495162868254.13794
[2025-11-21 21:03:58] 2025-11-22 02:02:52,916 | INFO     | mean x: 1763746159.9354517
[2025-11-21 21:03:58] 2025-11-22 02:02:52,916 | INFO     | mean y: 2943837.34061569
[2025-11-21 21:03:58] 2025-11-22 02:02:52,917 | INFO     | intersect: -2754315376.051506
[2025-11-21 21:03:58] 2025-11-22 02:02:52,918 | INFO     | chi2: 23.79469003684595
[2025-11-21 21:03:58] 2025-11-22 02:02:52,942 | INFO     | sum of square deviations: 312050651384.4792
[2025-11-21 21:03:58] 2025-11-22 02:02:53,025 | INFO     | monitor loop #3958: job 0:6893838324 is in state 'finished'
[2025-11-21 21:03:58] 2025-11-22 02:02:53,025 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 21:03:58] 2025-11-22 02:02:53,252 | INFO     | sum of deviations: 915977140148.4462
[2025-11-21 21:03:58] 2025-11-22 02:02:53,253 | INFO     | mean x: 1763746007.4550898
[2025-11-21 21:03:58] 2025-11-22 02:02:53,253 | INFO     | mean y: 2957513.343313373
[2025-11-21 21:03:58] 2025-11-22 02:02:53,287 | INFO     | intersect: -5174250150.506183
[2025-11-21 21:03:58] 2025-11-22 02:02:53,289 | INFO     | chi2: 18.891666382772673
[2025-11-21 21:03:58] 2025-11-22 02:02:53,289 | INFO     | current chi2=18.891666382772673 (change=20.605536976867405 %)
[2025-11-21 21:03:58] 2025-11-22 02:02:53,289 | INFO     | right removable region: 1001
[2025-11-21 21:03:58] 2025-11-22 02:02:53,304 | INFO     | sum of square deviations: 312048233954.4792
[2025-11-21 21:03:58] 2025-11-22 02:02:53,604 | INFO     | sum of deviations: 141352223545.3487
[2025-11-21 21:03:58] 2025-11-22 02:02:53,605 | INFO     | mean x: 1763746312.4550898
[2025-11-21 21:03:58] 2025-11-22 02:02:53,605 | INFO     | mean y: 2955327.1966067865
[2025-11-21 21:03:58] 2025-11-22 02:02:53,605 | INFO     | intersect: -795989950.833087
[2025-11-21 21:03:58] 2025-11-22 02:02:53,656 | INFO     | chi2: 20.846400419728216
[2025-11-21 21:03:58] 2025-11-22 02:02:53,657 | INFO     | current chi2=20.846400419728216 (change=12.390535924411383 %)
[2025-11-21 21:03:58] 2025-11-22 02:02:53,657 | INFO     | left removable region: 10
[2025-11-21 21:03:58] 2025-11-22 02:02:53,658 | INFO     | sum of square deviations: 301887251192.97473
[2025-11-21 21:03:58] 2025-11-22 02:02:53,981 | INFO     | sum of deviations: 505083600184.99976
[2025-11-21 21:03:58] 2025-11-22 02:02:53,982 | INFO     | mean x: 1763746281.9949546
[2025-11-21 21:03:58] 2025-11-22 02:02:53,982 | INFO     | mean y: 2975163.1997981835
[2025-11-21 21:03:58] 2025-11-22 02:02:53,982 | INFO     | intersect: -2947925606.549734
[2025-11-21 21:03:58] 2025-11-22 02:02:53,983 | INFO     | chi2: 14.989826042333753
[2025-11-21 21:03:58] 2025-11-22 02:02:53,984 | INFO     | current memory leak: 1.67 B/s (using 991 data points, chi2=14.99)
[2025-11-21 21:03:58] 2025-11-22 02:02:53,987 | INFO     | could have reported an average CPU frequency of 2600 MHz (37 samples)
[2025-11-21 21:03:58] 2025-11-22 02:02:53,987 | INFO     | ..............................
[2025-11-21 21:03:58] 2025-11-22 02:02:53,987 | INFO     | . Timing measurements:
[2025-11-21 21:03:58] 2025-11-22 02:02:53,988 | INFO     | . get job = 0 s
[2025-11-21 21:03:58] 2025-11-22 02:02:53,988 | INFO     | . initial setup = 4 s
[2025-11-21 21:03:58] 2025-11-22 02:02:53,988 | INFO     | . payload setup = 33 s
[2025-11-21 21:03:58] 2025-11-22 02:02:53,988 | INFO     | . stage-in = 0 s
[2025-11-21 21:03:58] 2025-11-22 02:02:53,988 | INFO     | . payload execution = 61436 s
[2025-11-21 21:03:58] 2025-11-22 02:02:53,988 | INFO     | . stage-out = 35 s
[2025-11-21 21:03:58] 2025-11-22 02:02:53,988 | INFO     | . log creation = 16 s
[2025-11-21 21:03:58] 2025-11-22 02:02:53,988 | INFO     | ..............................
[2025-11-21 21:03:58] 2025-11-22 02:02:54,400 | INFO     | time since job start (61621s) is within the limit (172800.0s)
[2025-11-21 21:03:58] 2025-11-22 02:02:55,528 | INFO     | 
[2025-11-21 21:03:58] 2025-11-22 02:02:55,528 | INFO     | job summary report
[2025-11-21 21:03:58] 2025-11-22 02:02:55,528 | INFO     | --------------------------------------------------
[2025-11-21 21:03:58] 2025-11-22 02:02:55,529 | INFO     | PanDA job id: 6893838324
[2025-11-21 21:03:58] 2025-11-22 02:02:55,529 | INFO     | task id: 47523449
[2025-11-21 21:03:58] 2025-11-22 02:02:55,529 | INFO     | errors: (none)
[2025-11-21 21:03:58] 2025-11-22 02:02:55,529 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 21:03:58] 2025-11-22 02:02:55,529 | INFO     | pilot state: finished 
[2025-11-21 21:03:58] 2025-11-22 02:02:55,529 | INFO     | transexitcode: 0
[2025-11-21 21:03:58] 2025-11-22 02:02:55,529 | INFO     | exeerrorcode: 0
[2025-11-21 21:03:58] 2025-11-22 02:02:55,529 | INFO     | exeerrordiag: 
[2025-11-21 21:03:58] 2025-11-22 02:02:55,529 | INFO     | exitcode: 0
[2025-11-21 21:03:58] 2025-11-22 02:02:55,529 | INFO     | exitmsg: OK
[2025-11-21 21:03:58] 2025-11-22 02:02:55,530 | INFO     | cpuconsumptiontime: 287116 s
[2025-11-21 21:03:58] 2025-11-22 02:02:55,530 | INFO     | nevents: 1000
[2025-11-21 21:03:58] 2025-11-22 02:02:55,530 | INFO     | neventsw: 0
[2025-11-21 21:03:58] 2025-11-22 02:02:55,530 | INFO     | pid: 2830474
[2025-11-21 21:03:58] 2025-11-22 02:02:55,530 | INFO     | pgrp: 2830474
[2025-11-21 21:03:58] 2025-11-22 02:02:55,530 | INFO     | corecount: 8
[2025-11-21 21:03:58] 2025-11-22 02:02:55,530 | INFO     | event service: False
[2025-11-21 21:03:58] 2025-11-22 02:02:55,530 | INFO     | sizes: {0: 2298636, 1: 2298835, 12: 2298835, 23: 2298863, 27: 2299153, 34: 2299181, 61473: 2352003, 61476: 2352002, 61516: 2361052, 61518: 2361108, 61561: 2361354}
[2025-11-21 21:03:58] 2025-11-22 02:02:55,530 | INFO     | --------------------------------------------------
[2025-11-21 21:03:58] 2025-11-22 02:02:55,531 | INFO     | 
[2025-11-21 21:03:58] 2025-11-22 02:02:55,531 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-21 21:03:58] 2025-11-22 02:02:55,892 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 21:03:58] 2025-11-22 02:02:55,893 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 21:03:58] 2025-11-22 02:02:55,893 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 21:03:58] 2025-11-22 02:02:55,893 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 21:03:58] 2025-11-22 02:02:55,893 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 21:03:58] 2025-11-22 02:02:55,893 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 21:03:58] 2025-11-22 02:02:55,893 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 21:03:58] 2025-11-22 02:02:55,893 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 21:03:58] 2025-11-22 02:02:55,893 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 21:03:58] 2025-11-22 02:02:55,894 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 21:03:58] 2025-11-22 02:02:55,894 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 21:03:58] 2025-11-22 02:02:55,894 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 21:03:58] 2025-11-22 02:02:55,894 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 21:03:58] 2025-11-22 02:02:55,894 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 21:03:58] 2025-11-22 02:02:55,894 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 21:03:58] 2025-11-22 02:02:55,894 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 21:03:58] 2025-11-22 02:02:55,894 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 21:03:58] 2025-11-22 02:02:55,894 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 21:03:58] 2025-11-22 02:02:55,894 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 21:03:58] 2025-11-22 02:02:55,895 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 21:03:58] 2025-11-22 02:02:55,895 | INFO     | job 6893838324 has completed (purged errors)
[2025-11-21 21:03:58] 2025-11-22 02:02:55,895 | INFO     | overall cleanup function is called
[2025-11-21 21:03:58] 2025-11-22 02:02:57,065 | INFO     | --- collectZombieJob: --- 10, [2830474]
[2025-11-21 21:03:58] 2025-11-22 02:02:57,065 | INFO     | zombie collector waiting for pid 2830474
[2025-11-21 21:03:58] 2025-11-22 02:02:57,065 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 21:03:58] 2025-11-22 02:02:57,065 | INFO     | collected zombie processes
[2025-11-21 21:03:58] 2025-11-22 02:02:57,066 | INFO     | will attempt to kill all subprocesses of pid=2830474
[2025-11-21 21:03:58] 2025-11-22 02:02:58,157 | INFO     | process IDs to be killed: [2830474] (in reverse order)
[2025-11-21 21:03:58] 2025-11-22 02:02:58,430 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 21:03:58] 2025-11-22 02:02:58,430 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 21:03:58] 2025-11-22 02:02:58,453 | INFO     | did not find any defunct processes belonging to 2830474
[2025-11-21 21:03:58] 2025-11-22 02:02:58,476 | INFO     | did not find any defunct processes belonging to 2830474
[2025-11-21 21:03:58] 2025-11-22 02:02:58,478 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 21:03:58] 2025-11-22 02:02:58,479 | INFO     | ready for new job
[2025-11-21 21:03:58] 2025-11-22 02:02:58,479 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 21:03:58] 2025-11-22 02:02:58,487 | INFO     | ***************************************
[2025-11-21 21:03:58] 2025-11-22 02:02:58,488 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 21:03:58] 2025-11-22 02:02:58,488 | INFO     | ***************************************
[2025-11-21 21:03:58] 2025-11-22 02:02:58,488 | INFO     | 
[2025-11-21 21:03:58] 2025-11-22 02:02:58,494 | INFO     | architecture information:
[2025-11-21 21:03:58] 2025-11-22 02:02:58,496 | INFO     | executing command: cat /etc/os-release
[2025-11-21 21:03:58] 2025-11-22 02:02:58,551 | INFO     | cat /etc/os-release:
[2025-11-21 21:03:58] NAME="CentOS Linux"
[2025-11-21 21:03:58] VERSION="7 (Core)"
[2025-11-21 21:03:58] ID="centos"
[2025-11-21 21:03:58] ID_LIKE="rhel fedora"
[2025-11-21 21:03:58] VERSION_ID="7"
[2025-11-21 21:03:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 21:03:58] ANSI_COLOR="0;31"
[2025-11-21 21:03:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 21:03:58] HOME_URL="https://www.centos.org/"
[2025-11-21 21:03:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 21:03:58] 
[2025-11-21 21:03:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 21:03:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 21:03:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 21:03:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 21:03:58] 
[2025-11-21 21:03:58] 2025-11-22 02:02:58,552 | INFO     | ***************************************
[2025-11-21 21:03:58] 2025-11-22 02:02:59,062 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-21 21:03:58] 2025-11-22 02:02:59,340 | INFO     | sufficient remaining disk space (48675946496 B)
[2025-11-21 21:03:58] 2025-11-22 02:02:59,340 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 21:03:58] 2025-11-22 02:02:59,340 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 21:03:58] 2025-11-22 02:02:59,340 | INFO     | update_server=False
[2025-11-21 21:03:58] 2025-11-22 02:02:59,340 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 21:03:58] 2025-11-22 02:02:59,353 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 21:03:58] 2025-11-22 02:02:59,362 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 21:03:58] 2025-11-22 02:02:59,362 | INFO     | aborting loop
[2025-11-21 21:03:58] 2025-11-22 02:02:59,370 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 21:03:58] 2025-11-22 02:02:59,406 | INFO     | all job control threads have been joined
[2025-11-21 21:03:58] 2025-11-22 02:03:00,220 | INFO     | all data control threads have been joined
[2025-11-21 21:03:58] 2025-11-22 02:03:00,327 | INFO     | all payload control threads have been joined
[2025-11-21 21:03:58] 2025-11-22 02:03:00,346 | INFO     | [job] retrieve thread has finished
[2025-11-21 21:03:58] 2025-11-22 02:03:00,368 | INFO     | [job] job monitor thread has finished
[2025-11-21 21:03:58] 2025-11-22 02:03:00,379 | INFO     | [data] copytool_in thread has finished
[2025-11-21 21:03:58] 2025-11-22 02:03:00,391 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 21:03:58] 2025-11-22 02:03:00,402 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 21:03:58] 2025-11-22 02:03:00,412 | INFO     | [job] control thread has finished
[2025-11-21 21:03:58] 2025-11-22 02:03:00,562 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 21:03:58] 2025-11-22 02:03:00,625 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 21:03:58] 2025-11-22 02:03:00,894 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 21:03:58] 2025-11-22 02:03:01,118 | INFO     | [payload] validate_post thread has finished
[2025-11-21 21:03:58] 2025-11-22 02:03:01,234 | INFO     | [data] control thread has finished
[2025-11-21 21:03:58] 2025-11-22 02:03:01,343 | INFO     | [payload] control thread has finished
[2025-11-21 21:03:58] 2025-11-22 02:03:01,344 | INFO     | [payload] failed_post thread has finished
[2025-11-21 21:03:58] 2025-11-22 02:03:01,386 | INFO     | [data] copytool_out thread has finished
[2025-11-21 21:03:58] 2025-11-22 02:03:01,568 | INFO     | [job] queue monitor thread has finished
[2025-11-21 21:03:58] 2025-11-22 02:03:01,696 | INFO     | [job] validate thread has finished
[2025-11-21 21:03:58] 2025-11-22 02:03:03,362 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 21:03:58] 2025-11-22 02:03:36,884 | INFO     | PID=2822508 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 21:03:58] 2025-11-22 02:03:36,884 | INFO     | .. there are 9 such processes running
[2025-11-21 21:03:58] 2025-11-22 02:03:36,884 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 21:03:58] 2025-11-22 02:03:36,884 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 21:03:58] 2025-11-22 02:03:36,884 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 21:03:58] 2025-11-22 02:03:45,265 | INFO     | [monitor] cgroup control has ended
[2025-11-21 21:03:58] 2025-11-22 02:03:46,822 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140585941616448)>', '<ExcThread(monitor, started 140585579030272)>']
[2025-11-21 21:03:58] 2025-11-22 02:03:46,982 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 21:03:58] 2025-11-22 02:03:46,982 | INFO     | [monitor] control thread has ended
[2025-11-21 21:03:58] 2025-11-22 02:03:51,848 | INFO     | all workflow threads have been joined
[2025-11-21 21:03:58] 2025-11-22 02:03:51,848 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 21:03:58] 2025-11-22 02:03:51,849 | INFO     | traces error code: 0
[2025-11-21 21:03:58] 2025-11-22 02:03:51,849 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 21:03:58] 2025-11-22 02:03:56,930 [wrapper] ==== pilot stdout END ====
[2025-11-21 21:03:58] 2025-11-22 02:03:56,961 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 21:03:58] 2025-11-22 02:03:56,967 [wrapper] pilotpid: 2822508
[2025-11-21 21:03:58] 2025-11-22 02:03:56,972 [wrapper] Pilot exit status: 0
[2025-11-21 21:03:58] 2025-11-22 02:03:57,155 [wrapper] pandaids: 6893838324
[2025-11-21 21:03:58] 2025-11-22 02:03:57,204 [wrapper] cleanup supervisor_pilot  204255 2822509
[2025-11-21 21:03:58] 2025-11-22 02:03:57,208 [wrapper] Test setup, not cleaning
[2025-11-21 21:03:58] 2025-11-22 02:03:57,212 [wrapper] apfmon messages muted
[2025-11-21 21:03:58] 2025-11-22 02:03:57,215 [wrapper] ==== wrapper stdout END ====
[2025-11-21 21:03:58] 2025-11-22 02:03:57,219 [wrapper] ==== wrapper stderr END ====
[2025-11-21 21:03:58]  *** Error codes and diagnostics ***
[2025-11-21 21:03:58]     "exeErrorCode": 0,
[2025-11-21 21:03:58]     "exeErrorDiag": "",
[2025-11-21 21:03:58]     "pilotErrorCode": 0,
[2025-11-21 21:03:58]     "pilotErrorDiag": "",
[2025-11-21 21:03:58]  *** Listing of results directory ***
[2025-11-21 21:03:58] total 1314804
[2025-11-21 21:03:58] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 05:06 pilot3.tar.gz
[2025-11-21 21:03:58] -rwx------. 1 boincer umatlas     36292 Nov 20 05:17 runpilot2-wrapper.sh
[2025-11-21 21:03:58] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 05:17 queuedata.json
[2025-11-21 21:03:58] -rw-r--r--. 1 boincer umatlas       100 Nov 21 03:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 21:03:58] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 03:54 run_atlas
[2025-11-21 21:03:58] -rw-r--r--. 1 boincer umatlas       105 Nov 21 03:54 job.xml
[2025-11-21 21:03:58] -rw-r--r--. 2 boincer umatlas 408925233 Nov 21 03:54 EVNT.47493127._000131.pool.root.1
[2025-11-21 21:03:58] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 03:54 start_atlas.sh
[2025-11-21 21:03:58] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 03:54 shared
[2025-11-21 21:03:58] -rw-r--r--. 2 boincer umatlas    590099 Nov 21 03:54 input.tar.gz
[2025-11-21 21:03:58] -rw-r--r--. 1 boincer umatlas         0 Nov 21 03:54 boinc_lockfile
[2025-11-21 21:03:58] -rw-r--r--. 1 boincer umatlas      2786 Nov 21 03:54 pandaJob.out
[2025-11-21 21:03:58] -rw-------. 1 boincer umatlas        57 Nov 21 03:54 setup.sh.local
[2025-11-21 21:03:58] -rw-------. 1 boincer umatlas    989817 Nov 21 03:55 agis_schedconf.cvmfs.json
[2025-11-21 21:03:58] drwx------. 5 boincer umatlas      4096 Nov 21 03:55 pilot3
[2025-11-21 21:03:58] -rw-r--r--. 1 boincer umatlas       533 Nov 21 20:21 boinc_task_state.xml
[2025-11-21 21:03:58] -rw-------. 1 boincer umatlas 913205181 Nov 21 20:56 HITS.47523449._001305.pool.root.1
[2025-11-21 21:03:58] -rw-------. 1 boincer umatlas      1085 Nov 21 21:01 memory_monitor_summary.json
[2025-11-21 21:03:58] -rw-------. 1 boincer umatlas   1526164 Nov 21 21:01 agis_ddmendpoints.agis.ALL.json
[2025-11-21 21:03:58] -rw-------. 1 boincer umatlas   2158648 Nov 21 21:02 log.47523449._001305.job.log.tgz.1
[2025-11-21 21:03:58] -rw-------. 1 boincer umatlas        95 Nov 21 21:02 pilot_heartbeat.json
[2025-11-21 21:03:58] -rw-------. 1 boincer umatlas      8668 Nov 21 21:02 heartbeat.json
[2025-11-21 21:03:58] -rw-r--r--. 1 boincer umatlas      6660 Nov 21 21:03 init_data.xml
[2025-11-21 21:03:58] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 21:03 boinc_mmap_file
[2025-11-21 21:03:58] -rw-r--r--. 1 boincer umatlas        29 Nov 21 21:03 wrapper_checkpoint.txt
[2025-11-21 21:03:58] -rw-------. 1 boincer umatlas      4823 Nov 21 21:03 pilotlog.txt
[2025-11-21 21:03:58] -rw-------. 1 boincer umatlas   7991910 Nov 21 21:03 log.47523449._001305.job.log.1
[2025-11-21 21:03:58] -rw-------. 1 boincer umatlas       353 Nov 21 21:03 output.list
[2025-11-21 21:03:58] -rw-r--r--. 1 boincer umatlas       620 Nov 21 21:03 runtime_log
[2025-11-21 21:03:58] -rw-------. 1 boincer umatlas  10168320 Nov 21 21:03 result.tar.gz
[2025-11-21 21:03:58] -rw-r--r--. 1 boincer umatlas      9338 Nov 21 21:03 runtime_log.err
[2025-11-21 21:03:58] -rw-------. 1 boincer umatlas       665 Nov 21 21:03 cizKDmhuGg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmOKGKDm2HX38m.diag
[2025-11-21 21:03:58] -rw-r--r--. 1 boincer umatlas     21887 Nov 21 21:03 stderr.txt
[2025-11-21 21:03:58] HITS file was successfully produced:
[2025-11-21 21:03:58] -rw-------. 1 boincer umatlas 913205181 Nov 21 20:56 shared/HITS.pool.root.1
[2025-11-21 21:03:58]  *** Contents of shared directory: ***
[2025-11-21 21:03:58] total 1301680
[2025-11-21 21:03:58] -rw-r--r--. 2 boincer umatlas 408925233 Nov 21 03:54 ATLAS.root_0
[2025-11-21 21:03:58] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 03:54 start_atlas.sh
[2025-11-21 21:03:58] -rw-r--r--. 2 boincer umatlas    590099 Nov 21 03:54 input.tar.gz
[2025-11-21 21:03:58] -rw-------. 1 boincer umatlas 913205181 Nov 21 20:56 HITS.pool.root.1
[2025-11-21 21:03:58] -rw-------. 1 boincer umatlas  10168320 Nov 21 21:03 result.tar.gz
21:03:59 (2818222): run_atlas exited; CPU time 287935.220095
21:03:59 (2818222): called boinc_finish(0)

</stderr_txt>
]]>

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