Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
20:29:35 (3745063): wrapper (7.7.26015): starting
20:29:35 (3745063): wrapper: running run_atlas (--nthreads 3)
[2025-11-22 20:29:35] Arguments: --nthreads 3
[2025-11-22 20:29:35] Threads: 3
[2025-11-22 20:29:35] Checking for CVMFS
[2025-11-22 20:29:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 20:29:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 20:29:35] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 20:29:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 20:29:35] 2.9.2.0 2923852 6075 84920 153183 2 81 35691627 36864000 0 130560 0 2286954 99.894 381406 5325 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-22 20:29:35] CVMFS is ok
[2025-11-22 20:29:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 20:29:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 20:29:35] Further information can be found at the LHC@home message board.
[2025-11-22 20:29:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 20:29:35] Checking for apptainer binary...
[2025-11-22 20:29:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 20:29:35] Running /usr/bin/apptainer --version
[2025-11-22 20:29:35] apptainer version 1.4.1-1.1
[2025-11-22 20:29:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 20:29:35] magicA161a
[2025-11-22 20:29:35] apptainer works
[2025-11-22 20:29:36] Set ATHENA_PROC_NUMBER=3
[2025-11-22 20:29:36] Set ATHENA_CORE_NUMBER=3
[2025-11-22 20:29:36] Starting ATLAS job with PandaID=6893835458
[2025-11-22 20:29:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 04:29:45]  *** The last 200 lines of the pilot log: ***
[2025-11-23 04:29:45] 2025-11-23 03:29:14,343 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 04:29:45] 2025-11-23 03:29:14,343 | INFO     | update_server=False
[2025-11-23 04:29:45] 2025-11-23 03:29:14,343 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 04:29:45] 2025-11-23 03:29:14,343 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 04:29:45] 2025-11-23 03:29:14,343 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 04:29:45] 2025-11-23 03:29:14,343 | INFO     | aborting loop
[2025-11-23 04:29:45] 2025-11-23 03:29:14,420 | INFO     | all data control threads have been joined
[2025-11-23 04:29:45] 2025-11-23 03:29:14,614 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 04:29:45] 2025-11-23 03:29:14,646 | INFO     | all job control threads have been joined
[2025-11-23 04:29:45] 2025-11-23 03:29:14,868 | INFO     | [monitor] cgroup control has ended
[2025-11-23 04:29:45] 2025-11-23 03:29:15,087 | INFO     | all payload control threads have been joined
[2025-11-23 04:29:45] 2025-11-23 03:29:15,349 | INFO     | [job] retrieve thread has finished
[2025-11-23 04:29:45] 2025-11-23 03:29:15,349 | INFO     | [job] job monitor thread has finished
[2025-11-23 04:29:45] 2025-11-23 03:29:15,426 | INFO     | [data] control thread has finished
[2025-11-23 04:29:45] 2025-11-23 03:29:15,570 | INFO     | [payload] failed_post thread has finished
[2025-11-23 04:29:45] 2025-11-23 03:29:15,652 | INFO     | [job] control thread has finished
[2025-11-23 04:29:45] 2025-11-23 03:29:16,059 | INFO     | [payload] validate_post thread has finished
[2025-11-23 04:29:45] 2025-11-23 03:29:16,093 | INFO     | [payload] control thread has finished
[2025-11-23 04:29:45] 2025-11-23 03:29:16,342 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 04:29:45] 2025-11-23 03:29:16,396 | INFO     | [data] copytool_in thread has finished
[2025-11-23 04:29:45] 2025-11-23 03:29:16,612 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 04:29:45] 2025-11-23 03:29:16,620 | INFO     | [data] copytool_out thread has finished
[2025-11-23 04:29:45] 2025-11-23 03:29:16,628 | INFO     | [job] validate thread has finished
[2025-11-23 04:29:45] 2025-11-23 03:29:16,629 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 04:29:45] 2025-11-23 03:29:17,266 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 04:29:45] 2025-11-23 03:29:18,272 | INFO     | [job] queue monitor thread has finished
[2025-11-23 04:29:45] 2025-11-23 03:29:18,350 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 04:29:45] 2025-11-23 03:29:25,276 | INFO     | job.realtimelogging is not enabled
[2025-11-23 04:29:45] 2025-11-23 03:29:26,282 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 04:29:45] 2025-11-23 03:29:27,598 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140292636677952)>', '<ExcThread(monitor, started 140292011321088)>']
[2025-11-23 04:29:45] 2025-11-23 03:29:32,624 | INFO     | all workflow threads have been joined
[2025-11-23 04:29:45] 2025-11-23 03:29:32,624 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 04:29:45] 2025-11-23 03:29:32,624 | INFO     | traces error code: 0
[2025-11-23 04:29:45] 2025-11-23 03:29:32,625 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 04:29:45] 2025-11-23 03:29:40,560 [wrapper] supervise_pilot (15 min periods counter: 33)
[2025-11-23 04:29:45] 2025-11-23 03:29:45,054 | INFO     | PID=3748783 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 04:29:45] 2025-11-23 03:29:45,055 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 04:29:45] 2025-11-23 03:29:45,055 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 04:29:45] 2025-11-23 03:29:45,055 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 04:29:45] 2025-11-23 03:29:45,055 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 04:29:45] 2025-11-23 03:29:45,055 | INFO     | [monitor] control thread has ended
[2025-11-23 04:29:45] 2025-11-23 03:29:45,101 [wrapper] ==== pilot stdout END ====
[2025-11-23 04:29:45] 2025-11-23 03:29:45,103 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 04:29:45] 2025-11-23 03:29:45,105 [wrapper] pilotpid: 3748783
[2025-11-23 04:29:45] 2025-11-23 03:29:45,108 [wrapper] Pilot exit status: 0
[2025-11-23 04:29:45] 2025-11-23 03:29:45,115 [wrapper] pandaids: 6893835458
[2025-11-23 04:29:45] 2025-11-23 03:29:45,131 [wrapper] cleanup supervisor_pilot 3812911 3748784
[2025-11-23 04:29:45] 2025-11-23 03:29:45,133 [wrapper] Test setup, not cleaning
[2025-11-23 04:29:45] 2025-11-23 03:29:45,135 [wrapper] apfmon messages muted
[2025-11-23 04:29:45] 2025-11-23 03:29:45,137 [wrapper] ==== wrapper stdout END ====
[2025-11-23 04:29:45] 2025-11-23 03:29:45,140 [wrapper] ==== wrapper stderr END ====
[2025-11-23 04:29:45]  *** Error codes and diagnostics ***
[2025-11-23 04:29:45]     "exeErrorCode": 0,
[2025-11-23 04:29:45]     "exeErrorDiag": "",
[2025-11-23 04:29:45]     "pilotErrorCode": 0,
[2025-11-23 04:29:45]     "pilotErrorDiag": "",
[2025-11-23 04:29:45]  *** Listing of results directory ***
[2025-11-23 04:29:45] total 1327440
[2025-11-23 04:29:45] -rw-r--r-- 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-23 04:29:45] -rw-r--r-- 1 boinc boinc      5112 Nov 20 11:14 queuedata.json
[2025-11-23 04:29:45] -rwx------ 1 boinc boinc     36292 Nov 20 11:14 runpilot2-wrapper.sh
[2025-11-23 04:29:45] -rw-r--r-- 1 boinc boinc       100 Nov 22 20:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 04:29:45] -rwxr-xr-x 1 boinc boinc      7986 Nov 22 20:29 run_atlas
[2025-11-23 04:29:45] -rw-r--r-- 1 boinc boinc       105 Nov 22 20:29 job.xml
[2025-11-23 04:29:45] -rw-r--r-- 2 boinc boinc 411915111 Nov 22 20:29 EVNT.47493127._000093.pool.root.1
[2025-11-23 04:29:45] -rw-r--r-- 2 boinc boinc    590101 Nov 22 20:29 input.tar.gz
[2025-11-23 04:29:45] -rw-r--r-- 2 boinc boinc     15847 Nov 22 20:29 start_atlas.sh
[2025-11-23 04:29:45] drwxrwx--x 2 boinc boinc      4096 Nov 22 20:29 shared
[2025-11-23 04:29:45] -rw-r--r-- 1 boinc boinc         0 Nov 22 20:29 boinc_setup_complete
[2025-11-23 04:29:45] -rw-r--r-- 1 boinc boinc      6448 Nov 22 20:29 init_data.xml
[2025-11-23 04:29:45] -rw-r--r-- 1 boinc boinc         0 Nov 22 20:29 boinc_lockfile
[2025-11-23 04:29:45] -rw-r--r-- 1 boinc boinc      2784 Nov 22 20:29 pandaJob.out
[2025-11-23 04:29:45] -rw------- 1 boinc boinc    989768 Nov 22 20:29 agis_schedconf.cvmfs.json
[2025-11-23 04:29:45] drwx------ 5 boinc boinc      4096 Nov 22 20:29 pilot3
[2025-11-23 04:29:45] -rw-r--r-- 1 boinc boinc       531 Nov 23 04:24 boinc_task_state.xml
[2025-11-23 04:29:45] -rw------- 1 boinc boinc 933035494 Nov 23 04:28 HITS.47523449._000930.pool.root.1
[2025-11-23 04:29:45] -rw------- 1 boinc boinc        95 Nov 23 04:29 pilot_heartbeat.json
[2025-11-23 04:29:45] -rw------- 1 boinc boinc      1021 Nov 23 04:29 memory_monitor_summary.json
[2025-11-23 04:29:45] -rw------- 1 boinc boinc   1526164 Nov 23 04:29 agis_ddmendpoints.agis.ALL.json
[2025-11-23 04:29:45] -rw------- 1 boinc boinc   1173508 Nov 23 04:29 log.47523449._000930.job.log.tgz.1
[2025-11-23 04:29:45] -rw------- 1 boinc boinc      8566 Nov 23 04:29 heartbeat.json
[2025-11-23 04:29:45] -rw-r--r-- 1 boinc boinc      8192 Nov 23 04:29 boinc_mmap_file
[2025-11-23 04:29:45] -rw-r--r-- 1 boinc boinc        28 Nov 23 04:29 wrapper_checkpoint.txt
[2025-11-23 04:29:45] -rw------- 1 boinc boinc       747 Nov 23 04:29 pilotlog.txt
[2025-11-23 04:29:45] -rw------- 1 boinc boinc   4050340 Nov 23 04:29 log.47523449._000930.job.log.1
[2025-11-23 04:29:45] -rw------- 1 boinc boinc       353 Nov 23 04:29 output.list
[2025-11-23 04:29:45] -rw-r--r-- 1 boinc boinc       620 Nov 23 04:29 runtime_log
[2025-11-23 04:29:45] -rw------- 1 boinc boinc   5242880 Nov 23 04:29 result.tar.gz
[2025-11-23 04:29:45] -rw------- 1 boinc boinc       669 Nov 23 04:29 xx9NDmlrGg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqHGKDmPspaUn.diag
[2025-11-23 04:29:45] -rw-r--r-- 1 boinc boinc      8918 Nov 23 04:29 runtime_log.err
[2025-11-23 04:29:45] -rw-r--r-- 1 boinc boinc      7717 Nov 23 04:29 stderr.txt
[2025-11-23 04:29:45] HITS file was successfully produced:
[2025-11-23 04:29:45] -rw------- 1 boinc boinc 933035494 Nov 23 04:28 shared/HITS.pool.root.1
[2025-11-23 04:29:45]  *** Contents of shared directory: ***
[2025-11-23 04:29:45] total 1319156
[2025-11-23 04:29:45] -rw-r--r-- 2 boinc boinc 411915111 Nov 22 20:29 ATLAS.root_0
[2025-11-23 04:29:45] -rw-r--r-- 2 boinc boinc    590101 Nov 22 20:29 input.tar.gz
[2025-11-23 04:29:45] -rw-r--r-- 2 boinc boinc     15847 Nov 22 20:29 start_atlas.sh
[2025-11-23 04:29:45] -rw------- 1 boinc boinc 933035494 Nov 23 04:28 HITS.pool.root.1
[2025-11-23 04:29:45] -rw------- 1 boinc boinc   5242880 Nov 23 04:29 result.tar.gz
04:29:46 (3745063): run_atlas exited; CPU time 84806.270144
04:29:46 (3745063): called boinc_finish(0)

</stderr_txt>
]]>

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