Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:08:32 (11144): wrapper (7.7.26015): starting
01:08:32 (11144): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 01:08:32] Arguments: --nthreads 8
[2025-11-23 01:08:32] Threads: 8
[2025-11-23 01:08:32] Checking for CVMFS
[2025-11-23 01:08:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 01:08:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 01:08:33] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 01:08:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 01:08:35] 2.11.2.0 22643 141216 138476 153190 1 128 18202431 25165824 3960 130560 2 43157530 99.871 23722468 2224 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-23 01:08:35] CVMFS is ok
[2025-11-23 01:08:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 01:08:35] Checking for apptainer binary...
[2025-11-23 01:08:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 01:08:35] Running /usr/bin/apptainer --version
[2025-11-23 01:08:35] apptainer version 1.3.2-1.el7
[2025-11-23 01:08:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 01:08:38] cg-vwn227.simple-grid.lan
[2025-11-23 01:08:38] apptainer works
[2025-11-23 01:08:38] Set ATHENA_PROC_NUMBER=8
[2025-11-23 01:08:38] Set ATHENA_CORE_NUMBER=8
[2025-11-23 01:08:38] Starting ATLAS job with PandaID=6893835386
[2025-11-23 01:08:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 02:43:27]  *** The last 200 lines of the pilot log: ***
[2025-11-24 02:43:27] 2025-11-24 01:42:24,357 | INFO     | monitor loop #6156: job 0:6893835386 is in state 'finished'
[2025-11-24 02:43:27] 2025-11-24 01:42:24,357 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 02:43:27] 2025-11-24 01:42:24,664 | INFO     | time since job start (91847s) is within the limit (172800.0s)
[2025-11-24 02:43:27] 2025-11-24 01:42:25,724 [wrapper] supervise_pilot (15 min periods counter: 103)
[2025-11-24 02:43:27] 2025-11-24 01:42:26,671 | INFO     | time since job start (91849s) is within the limit (172800.0s)
[2025-11-24 02:43:27] 2025-11-24 01:42:26,870 | INFO     | monitor loop #6157: job 0:6893835386 is in state 'finished'
[2025-11-24 02:43:27] 2025-11-24 01:42:26,870 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 02:43:27] 2025-11-24 01:42:28,678 | INFO     | time since job start (91851s) is within the limit (172800.0s)
[2025-11-24 02:43:27] 2025-11-24 01:42:29,377 | INFO     | monitor loop #6158: job 0:6893835386 is in state 'finished'
[2025-11-24 02:43:27] 2025-11-24 01:42:29,377 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 02:43:27] 2025-11-24 01:42:29,910 | INFO     | PID=15179 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 02:43:27] 2025-11-24 01:42:29,911 | INFO     | .. there are 9 such processes running
[2025-11-24 02:43:27] 2025-11-24 01:42:30,912 | INFO     | time since job start (91853s) is within the limit (172800.0s)
[2025-11-24 02:43:27] 2025-11-24 01:42:31,883 | INFO     | monitor loop #6159: job 0:6893835386 is in state 'finished'
[2025-11-24 02:43:27] 2025-11-24 01:42:31,883 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 02:43:27] 2025-11-24 01:42:32,065 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 02:43:27] 2025-11-24 01:42:32,066 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-24 02:43:27] 2025-11-24 01:42:32,068 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6893835386/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 02:43:27] 2025-11-24 01:42:32,069 | INFO     | extracted standard info from prmon json
[2025-11-24 02:43:27] 2025-11-24 01:42:32,069 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 02:43:27] 2025-11-24 01:42:32,069 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 02:43:27] 2025-11-24 01:42:32,101 | INFO     | fitting pss+swap vs Time
[2025-11-24 02:43:27] 2025-11-24 01:42:32,104 | INFO     | sum of square deviations: 1042346187534.9847
[2025-11-24 02:43:27] 2025-11-24 01:42:32,173 | INFO     | sum of deviations: 2340977862644.694
[2025-11-24 02:43:27] 2025-11-24 01:42:32,174 | INFO     | mean x: 1763902753.853805
[2025-11-24 02:43:27] 2025-11-24 01:42:32,174 | INFO     | mean y: 2858802.3411214952
[2025-11-24 02:43:27] 2025-11-24 01:42:32,174 | INFO     | intersect: -3958643957.5000544
[2025-11-24 02:43:27] 2025-11-24 01:42:32,176 | INFO     | chi2: 18.44951313675095
[2025-11-24 02:43:27] 2025-11-24 01:42:32,178 | INFO     | sum of square deviations: 1031944183113.2897
[2025-11-24 02:43:27] 2025-11-24 01:42:32,249 | INFO     | sum of deviations: 2834788637471.652
[2025-11-24 02:43:27] 2025-11-24 01:42:32,249 | INFO     | mean x: 1763902601.3583388
[2025-11-24 02:43:27] 2025-11-24 01:42:32,250 | INFO     | mean y: 2866040.9109176155
[2025-11-24 02:43:27] 2025-11-24 01:42:32,250 | INFO     | intersect: -4842639301.104623
[2025-11-24 02:43:27] 2025-11-24 01:42:32,252 | INFO     | chi2: 15.232390299130977
[2025-11-24 02:43:27] 2025-11-24 01:42:32,252 | INFO     | current chi2=15.232390299130977 (change=17.43744029327012 %)
[2025-11-24 02:43:27] 2025-11-24 01:42:32,252 | INFO     | right removable region: 1492
[2025-11-24 02:43:27] 2025-11-24 01:42:32,254 | INFO     | sum of square deviations: 1031942946033.2898
[2025-11-24 02:43:27] 2025-11-24 01:42:32,329 | INFO     | sum of deviations: 1845888095450.1272
[2025-11-24 02:43:27] 2025-11-24 01:42:32,329 | INFO     | mean x: 1763902906.3583388
[2025-11-24 02:43:27] 2025-11-24 01:42:32,330 | INFO     | mean y: 2866057.4072337574
[2025-11-24 02:43:27] 2025-11-24 01:42:32,330 | INFO     | intersect: -3152315523.9897118
[2025-11-24 02:43:27] 2025-11-24 01:42:32,331 | INFO     | chi2: 15.624589645005035
[2025-11-24 02:43:27] 2025-11-24 01:42:32,332 | INFO     | current chi2=15.624589645005035 (change=15.311642485127386 %)
[2025-11-24 02:43:27] 2025-11-24 01:42:32,332 | INFO     | left removable region: 10
[2025-11-24 02:43:27] 2025-11-24 01:42:32,334 | INFO     | sum of square deviations: 1009301955591.7384
[2025-11-24 02:43:27] 2025-11-24 01:42:32,422 | INFO     | sum of deviations: 2295680796452.0254
[2025-11-24 02:43:27] 2025-11-24 01:42:32,422 | INFO     | mean x: 1763902875.8643725
[2025-11-24 02:43:27] 2025-11-24 01:42:32,422 | INFO     | mean y: 2877215.1842105263
[2025-11-24 02:43:27] 2025-11-24 01:42:32,422 | INFO     | intersect: -4009160942.9646697
[2025-11-24 02:43:27] 2025-11-24 01:42:32,424 | INFO     | chi2: 11.359898163513002
[2025-11-24 02:43:27] 2025-11-24 01:42:32,424 | INFO     | current memory leak: 2.27 B/s (using 1482 data points, chi2=11.36)
[2025-11-24 02:43:27] 2025-11-24 01:42:32,426 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-24 02:43:27] 2025-11-24 01:42:32,427 | INFO     | ..............................
[2025-11-24 02:43:27] 2025-11-24 01:42:32,427 | INFO     | . Timing measurements:
[2025-11-24 02:43:27] 2025-11-24 01:42:32,427 | INFO     | . get job = 0 s
[2025-11-24 02:43:27] 2025-11-24 01:42:32,427 | INFO     | . initial setup = 13 s
[2025-11-24 02:43:27] 2025-11-24 01:42:32,427 | INFO     | . payload setup = 115 s
[2025-11-24 02:43:27] 2025-11-24 01:42:32,427 | INFO     | . stage-in = 0 s
[2025-11-24 02:43:27] 2025-11-24 01:42:32,427 | INFO     | . payload execution = 91454 s
[2025-11-24 02:43:27] 2025-11-24 01:42:32,427 | INFO     | . stage-out = 5 s
[2025-11-24 02:43:27] 2025-11-24 01:42:32,427 | INFO     | . log creation = 2 s
[2025-11-24 02:43:27] 2025-11-24 01:42:32,428 | INFO     | ..............................
[2025-11-24 02:43:27] 2025-11-24 01:42:32,576 | INFO     | 
[2025-11-24 02:43:27] 2025-11-24 01:42:32,576 | INFO     | job summary report
[2025-11-24 02:43:27] 2025-11-24 01:42:32,577 | INFO     | --------------------------------------------------
[2025-11-24 02:43:27] 2025-11-24 01:42:32,577 | INFO     | PanDA job id: 6893835386
[2025-11-24 02:43:27] 2025-11-24 01:42:32,577 | INFO     | task id: 47523449
[2025-11-24 02:43:27] 2025-11-24 01:42:32,577 | INFO     | errors: (none)
[2025-11-24 02:43:27] 2025-11-24 01:42:32,577 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 02:43:27] 2025-11-24 01:42:32,577 | INFO     | pilot state: finished 
[2025-11-24 02:43:27] 2025-11-24 01:42:32,577 | INFO     | transexitcode: 0
[2025-11-24 02:43:27] 2025-11-24 01:42:32,577 | INFO     | exeerrorcode: 0
[2025-11-24 02:43:27] 2025-11-24 01:42:32,577 | INFO     | exeerrordiag: 
[2025-11-24 02:43:27] 2025-11-24 01:42:32,577 | INFO     | exitcode: 0
[2025-11-24 02:43:27] 2025-11-24 01:42:32,577 | INFO     | exitmsg: OK
[2025-11-24 02:43:27] 2025-11-24 01:42:32,578 | INFO     | cpuconsumptiontime: 340676 s
[2025-11-24 02:43:27] 2025-11-24 01:42:32,578 | INFO     | nevents: 1000
[2025-11-24 02:43:27] 2025-11-24 01:42:32,578 | INFO     | neventsw: 0
[2025-11-24 02:43:27] 2025-11-24 01:42:32,578 | INFO     | pid: 21796
[2025-11-24 02:43:27] 2025-11-24 01:42:32,578 | INFO     | pgrp: 21796
[2025-11-24 02:43:27] 2025-11-24 01:42:32,578 | INFO     | corecount: 8
[2025-11-24 02:43:27] 2025-11-24 01:42:32,578 | INFO     | event service: False
[2025-11-24 02:43:27] 2025-11-24 01:42:32,578 | INFO     | sizes: {0: 2298576, 1: 2298831, 12: 2298831, 23: 2298859, 34: 2298887, 44: 2298915, 55: 2299071, 66: 2299099, 77: 2299127, 87: 2299473, 91573: 2362455, 91580: 2371
[2025-11-24 02:43:27] 2025-11-24 01:42:32,578 | INFO     | --------------------------------------------------
[2025-11-24 02:43:27] 2025-11-24 01:42:32,578 | INFO     | 
[2025-11-24 02:43:27] 2025-11-24 01:42:32,578 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-11-24 02:43:27] 2025-11-24 01:42:32,922 | INFO     | time since job start (91855s) is within the limit (172800.0s)
[2025-11-24 02:43:27] 2025-11-24 01:42:33,043 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 02:43:27] 2025-11-24 01:42:33,043 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 02:43:27] 2025-11-24 01:42:33,043 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 02:43:27] 2025-11-24 01:42:33,043 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 02:43:27] 2025-11-24 01:42:33,043 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 02:43:27] 2025-11-24 01:42:33,043 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 02:43:27] 2025-11-24 01:42:33,043 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 02:43:27] 2025-11-24 01:42:33,044 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 02:43:27] 2025-11-24 01:42:33,044 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 02:43:27] 2025-11-24 01:42:33,044 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 02:43:27] 2025-11-24 01:42:33,044 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 02:43:27] 2025-11-24 01:42:33,044 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 02:43:27] 2025-11-24 01:42:33,044 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 02:43:27] 2025-11-24 01:42:33,044 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 02:43:27] 2025-11-24 01:42:33,044 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 02:43:27] 2025-11-24 01:42:33,044 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 02:43:27] 2025-11-24 01:42:33,044 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 02:43:27] 2025-11-24 01:42:33,045 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 02:43:27] 2025-11-24 01:42:33,045 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 02:43:27] 2025-11-24 01:42:33,045 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 02:43:27] 2025-11-24 01:42:33,045 | INFO     | job 6893835386 has completed (purged errors)
[2025-11-24 02:43:27] 2025-11-24 01:42:33,045 | INFO     | overall cleanup function is called
[2025-11-24 02:43:27] 2025-11-24 01:42:34,067 | INFO     | --- collectZombieJob: --- 10, [21796]
[2025-11-24 02:43:27] 2025-11-24 01:42:34,068 | INFO     | zombie collector waiting for pid 21796
[2025-11-24 02:43:27] 2025-11-24 01:42:34,068 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 02:43:27] 2025-11-24 01:42:34,068 | INFO     | collected zombie processes
[2025-11-24 02:43:27] 2025-11-24 01:42:34,068 | INFO     | will attempt to kill all subprocesses of pid=21796
[2025-11-24 02:43:27] 2025-11-24 01:42:34,202 | INFO     | process IDs to be killed: [21796] (in reverse order)
[2025-11-24 02:43:27] 2025-11-24 01:42:35,167 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 02:43:27] 2025-11-24 01:42:35,168 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 02:43:27] 2025-11-24 01:42:35,171 | INFO     | did not find any defunct processes belonging to 21796
[2025-11-24 02:43:27] 2025-11-24 01:42:35,176 | INFO     | did not find any defunct processes belonging to 21796
[2025-11-24 02:43:27] 2025-11-24 01:42:35,242 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 02:43:27] 2025-11-24 01:42:35,242 | INFO     | ready for new job
[2025-11-24 02:43:27] 2025-11-24 01:42:35,243 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 02:43:27] 2025-11-24 01:42:35,250 | INFO     | ***************************************
[2025-11-24 02:43:27] 2025-11-24 01:42:35,250 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 02:43:27] 2025-11-24 01:42:35,250 | INFO     | ***************************************
[2025-11-24 02:43:27] 2025-11-24 01:42:35,250 | INFO     | 
[2025-11-24 02:43:27] 2025-11-24 01:42:35,251 | INFO     | pilot is running in a VM
[2025-11-24 02:43:27] 2025-11-24 01:42:35,251 | INFO     | architecture information:
[2025-11-24 02:43:27] 2025-11-24 01:42:35,260 | INFO     | executing command: cat /etc/os-release
[2025-11-24 02:43:27] 2025-11-24 01:42:35,459 | INFO     | cat /etc/os-release:
[2025-11-24 02:43:27] NAME="CentOS Linux"
[2025-11-24 02:43:27] VERSION="7 (Core)"
[2025-11-24 02:43:27] ID="centos"
[2025-11-24 02:43:27] ID_LIKE="rhel fedora"
[2025-11-24 02:43:27] VERSION_ID="7"
[2025-11-24 02:43:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 02:43:27] ANSI_COLOR="0;31"
[2025-11-24 02:43:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 02:43:27] HOME_URL="https://www.centos.org/"
[2025-11-24 02:43:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 02:43:27] 
[2025-11-24 02:43:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 02:43:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 02:43:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 02:43:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 02:43:27] 
[2025-11-24 02:43:27] 2025-11-24 01:42:35,460 | INFO     | ***************************************
[2025-11-24 02:43:27] 2025-11-24 01:42:35,963 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-11-24 02:43:27] 2025-11-24 01:42:36,058 | INFO     | sufficient remaining disk space (494998126592 B)
[2025-11-24 02:43:27] 2025-11-24 01:42:36,059 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 02:43:27] 2025-11-24 01:42:36,059 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 02:43:27] 2025-11-24 01:42:36,059 | INFO     | update_server=False
[2025-11-24 02:43:27] 2025-11-24 01:42:36,059 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 02:43:27] 2025-11-24 01:42:36,060 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 02:43:27] 2025-11-24 01:42:36,064 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 02:43:27] 2025-11-24 01:42:36,064 | INFO     | aborting loop
[2025-11-24 02:43:27] 2025-11-24 01:42:36,298 | INFO     | all data control threads have been joined
[2025-11-24 02:43:27] 2025-11-24 01:42:36,723 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 02:43:27] 2025-11-24 01:42:36,735 | INFO     | all payload control threads have been joined
[2025-11-24 02:43:27] 2025-11-24 01:42:37,066 | INFO     | [job] retrieve thread has finished
[2025-11-24 02:43:27] 2025-11-24 01:42:37,070 | INFO     | [job] job monitor thread has finished
[2025-11-24 02:43:27] 2025-11-24 01:42:37,251 | INFO     | [payload] validate_post thread has finished
[2025-11-24 02:43:27] 2025-11-24 01:42:37,304 | INFO     | [data] control thread has finished
[2025-11-24 02:43:27] 2025-11-24 01:42:37,334 | INFO     | all job control threads have been joined
[2025-11-24 02:43:27] 2025-11-24 01:42:37,452 | INFO     | [job] validate thread has finished
[2025-11-24 02:43:27] 2025-11-24 01:42:37,486 | INFO     | [data] copytool_in thread has finished
[2025-11-24 02:43:27] 2025-11-24 01:42:37,560 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 02:43:27] 2025-11-24 01:42:37,593 | INFO     | [payload] failed_post thread has finished
[2025-11-24 02:43:27] 2025-11-24 01:42:37,596 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 02:43:27] 2025-11-24 01:42:37,741 | INFO     | [payload] control thread has finished
[2025-11-24 02:43:27] 2025-11-24 01:42:37,806 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 02:43:27] 2025-11-24 01:42:38,298 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 02:43:27] 2025-11-24 01:42:38,341 | INFO     | [job] control thread has finished
[2025-11-24 02:43:27] 2025-11-24 01:42:38,508 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 02:43:27] 2025-11-24 01:42:38,603 | INFO     | [job] queue monitor thread has finished
[2025-11-24 02:43:27] 2025-11-24 01:42:38,730 | INFO     | [data] copytool_out thread has finished
[2025-11-24 02:43:27] 2025-11-24 01:42:40,069 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 02:43:27] 2025-11-24 01:43:06,176 | INFO     | PID=15179 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 02:43:27] 2025-11-24 01:43:06,177 | INFO     | .. there are 9 such processes running
[2025-11-24 02:43:27] 2025-11-24 01:43:06,177 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 02:43:27] 2025-11-24 01:43:06,177 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 02:43:27] 2025-11-24 01:43:06,177 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 02:43:27] 2025-11-24 01:43:16,791 | INFO     | [monitor] cgroup control has ended
[2025-11-24 02:43:27] 2025-11-24 01:43:18,506 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140609460045632)>', '<ExcThread(monitor, started 140609016809216)>']
[2025-11-24 02:43:27] 2025-11-24 01:43:19,254 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 02:43:27] 2025-11-24 01:43:19,255 | INFO     | [monitor] control thread has ended
[2025-11-24 02:43:27] 2025-11-24 01:43:23,531 | INFO     | all workflow threads have been joined
[2025-11-24 02:43:27] 2025-11-24 01:43:23,532 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 02:43:27] 2025-11-24 01:43:23,532 | INFO     | traces error code: 0
[2025-11-24 02:43:27] 2025-11-24 01:43:23,532 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 02:43:27] 2025-11-24 01:43:23,879 [wrapper] ==== pilot stdout END ====
[2025-11-24 02:43:27] 2025-11-24 01:43:23,922 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 02:43:27] 2025-11-24 01:43:23,981 [wrapper] pilotpid: 15179
[2025-11-24 02:43:27] 2025-11-24 01:43:24,027 [wrapper] Pilot exit status: 0
[2025-11-24 02:43:27] 2025-11-24 01:43:24,367 [wrapper] pandaids: 6893835386
[2025-11-24 02:43:27] 2025-11-24 01:43:24,767 [wrapper] cleanup supervisor_pilot  6489 15180
[2025-11-24 02:43:27] 2025-11-24 01:43:24,810 [wrapper] Test setup, not cleaning
[2025-11-24 02:43:27] 2025-11-24 01:43:24,871 [wrapper] apfmon messages muted
[2025-11-24 02:43:27] 2025-11-24 01:43:24,920 [wrapper] ==== wrapper stdout END ====
[2025-11-24 02:43:27] 2025-11-24 01:43:24,967 [wrapper] ==== wrapper stderr END ====
[2025-11-24 02:43:27]  *** Error codes and diagnostics ***
[2025-11-24 02:43:27]     "exeErrorCode": 0,
[2025-11-24 02:43:27]     "exeErrorDiag": "",
[2025-11-24 02:43:27]     "pilotErrorCode": 0,
[2025-11-24 02:43:27]     "pilotErrorDiag": "",
[2025-11-24 02:43:27]  *** Listing of results directory ***
[2025-11-24 02:43:27] total 1334720
[2025-11-24 02:43:27] -rw-r--r--. 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-24 02:43:27] -rw-r--r--. 1 boinc boinc      5112 Nov 20 11:14 queuedata.json
[2025-11-24 02:43:27] -rwx------. 1 boinc boinc     36292 Nov 20 11:14 runpilot2-wrapper.sh
[2025-11-24 02:43:27] -rw-r--r--. 1 boinc boinc       100 Nov 23 01:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 02:43:27] -rwxr-xr-x. 1 boinc boinc      7986 Nov 23 01:08 run_atlas
[2025-11-24 02:43:27] -rw-r--r--. 1 boinc boinc       105 Nov 23 01:08 job.xml
[2025-11-24 02:43:27] -rw-r--r--. 2 boinc boinc 412318887 Nov 23 01:08 EVNT.47493127._000088.pool.root.1
[2025-11-24 02:43:27] -rw-r--r--. 1 boinc boinc      6392 Nov 23 01:08 init_data.xml
[2025-11-24 02:43:27] -rw-r--r--. 2 boinc boinc     15847 Nov 23 01:08 start_atlas.sh
[2025-11-24 02:43:27] drwxrwx--x. 2 boinc boinc        68 Nov 23 01:08 shared
[2025-11-24 02:43:27] -rw-r--r--. 2 boinc boinc    590103 Nov 23 01:08 input.tar.gz
[2025-11-24 02:43:27] -rw-r--r--. 1 boinc boinc         0 Nov 23 01:08 boinc_lockfile
[2025-11-24 02:43:27] -rw-r--r--. 1 boinc boinc      2784 Nov 23 01:08 pandaJob.out
[2025-11-24 02:43:27] -rw-------. 1 boinc boinc    989784 Nov 23 01:11 agis_schedconf.cvmfs.json
[2025-11-24 02:43:27] drwx------. 5 boinc boinc      4096 Nov 23 01:11 pilot3
[2025-11-24 02:43:27] -rw-r--r--. 1 boinc boinc       533 Nov 24 02:12 boinc_task_state.xml
[2025-11-24 02:43:27] -rw-------. 1 boinc boinc 920992436 Nov 24 02:39 HITS.47523449._000880.pool.root.1
[2025-11-24 02:43:27] -rw-------. 1 boinc boinc      1030 Nov 24 02:40 memory_monitor_summary.json
[2025-11-24 02:43:27] -rw-------. 1 boinc boinc   1526164 Nov 24 02:40 agis_ddmendpoints.agis.ALL.json
[2025-11-24 02:43:27] -rw-------. 1 boinc boinc   2564512 Nov 24 02:40 log.47523449._000880.job.log.tgz.1
[2025-11-24 02:43:27] -rw-------. 1 boinc boinc        95 Nov 24 02:42 pilot_heartbeat.json
[2025-11-24 02:43:27] -rw-------. 1 boinc boinc      7948 Nov 24 02:42 heartbeat.json
[2025-11-24 02:43:27] -rw-r--r--. 1 boinc boinc      8192 Nov 24 02:43 boinc_mmap_file
[2025-11-24 02:43:27] -rw-r--r--. 1 boinc boinc        29 Nov 24 02:43 wrapper_checkpoint.txt
[2025-11-24 02:43:27] -rw-------. 1 boinc boinc      4884 Nov 24 02:43 pilotlog.txt
[2025-11-24 02:43:27] -rw-------. 1 boinc boinc  12205013 Nov 24 02:43 log.47523449._000880.job.log.1
[2025-11-24 02:43:27] -rw-------. 1 boinc boinc       353 Nov 24 02:43 output.list
[2025-11-24 02:43:27] -rw-r--r--. 1 boinc boinc       620 Nov 24 02:43 runtime_log
[2025-11-24 02:43:27] -rw-------. 1 boinc boinc  14786560 Nov 24 02:43 result.tar.gz
[2025-11-24 02:43:27] -rw-r--r--. 1 boinc boinc      8817 Nov 24 02:43 runtime_log.err
[2025-11-24 02:43:27] -rw-------. 1 boinc boinc       662 Nov 24 02:43 GS9LDmlrGg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmFHGKDmoyy6rm.diag
[2025-11-24 02:43:27] -rw-r--r--. 1 boinc boinc     21495 Nov 24 02:43 stderr.txt
[2025-11-24 02:43:27] HITS file was successfully produced:
[2025-11-24 02:43:27] -rw-------. 1 boinc boinc 920992436 Nov 24 02:39 shared/HITS.pool.root.1
[2025-11-24 02:43:27]  *** Contents of shared directory: ***
[2025-11-24 02:43:27] total 1317100
[2025-11-24 02:43:27] -rw-r--r--. 2 boinc boinc 412318887 Nov 23 01:08 ATLAS.root_0
[2025-11-24 02:43:27] -rw-r--r--. 2 boinc boinc     15847 Nov 23 01:08 start_atlas.sh
[2025-11-24 02:43:27] -rw-r--r--. 2 boinc boinc    590103 Nov 23 01:08 input.tar.gz
[2025-11-24 02:43:27] -rw-------. 1 boinc boinc 920992436 Nov 24 02:39 HITS.pool.root.1
[2025-11-24 02:43:27] -rw-------. 1 boinc boinc  14786560 Nov 24 02:43 result.tar.gz
02:43:29 (11144): run_atlas exited; CPU time 341176.451446
02:43:29 (11144): called boinc_finish(0)

</stderr_txt>
]]>

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