Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:22:29 (966156): wrapper (7.7.26015): starting
22:22:29 (966156): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 22:22:29] Arguments: --nthreads 8
[2025-11-20 22:22:29] Threads: 8
[2025-11-20 22:22:29] Checking for CVMFS
[2025-11-20 22:22:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 22:22:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 22:22:30] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 22:22:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 22:22:30] 2.13.2.0 6867 26096 254436 153106 1 106 22007343 40960001 6423 16776704 0 19667252 99.585 18769869 29159 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 22:22:30] CVMFS is ok
[2025-11-20 22:22:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 22:22:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 22:22:30] Further information can be found at the LHC@home message board.
[2025-11-20 22:22:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 22:22:30] Checking for apptainer binary...
[2025-11-20 22:22:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 22:22:30] Running /usr/bin/apptainer --version
[2025-11-20 22:22:30] apptainer version 1.4.4-1.el9
[2025-11-20 22:22:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 22:22:30] c-211-11.aglt2.org
[2025-11-20 22:22:30] apptainer works
[2025-11-20 22:22:30] Set ATHENA_PROC_NUMBER=8
[2025-11-20 22:22:30] Set ATHENA_CORE_NUMBER=8
[2025-11-20 22:22:30] Starting ATLAS job with PandaID=6893835383
[2025-11-20 22:22:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 10:35:00]  *** The last 200 lines of the pilot log: ***
[2025-11-21 10:35:00] 2025-11-21 15:34:11,994 | INFO     | time since job start (43890s) is within the limit (172800.0s)
[2025-11-21 10:35:00] 2025-11-21 15:34:12,391 | INFO     | monitor loop #3130: job 0:6893835383 is in state 'finished'
[2025-11-21 10:35:00] 2025-11-21 15:34:12,392 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 10:35:00] 2025-11-21 15:34:13,536 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 10:35:00] 2025-11-21 15:34:13,545 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2755.655604166666
[2025-11-21 10:35:00] 2025-11-21 15:34:13,554 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6893835383/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 10:35:00] 2025-11-21 15:34:13,554 | INFO     | extracted standard info from prmon json
[2025-11-21 10:35:00] 2025-11-21 15:34:13,555 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 10:35:00] 2025-11-21 15:34:13,555 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 10:35:00] 2025-11-21 15:34:13,569 | INFO     | fitting pss+swap vs Time
[2025-11-21 10:35:00] 2025-11-21 15:34:13,570 | INFO     | sum of square deviations: 115252228031.39653
[2025-11-21 10:35:00] 2025-11-21 15:34:13,584 | INFO     | sum of deviations: 917022935080.5018
[2025-11-21 10:35:00] 2025-11-21 15:34:13,584 | INFO     | mean x: 1763717286.3922114
[2025-11-21 10:35:00] 2025-11-21 15:34:13,584 | INFO     | mean y: 2940678.2322670375
[2025-11-21 10:35:00] 2025-11-21 15:34:13,584 | INFO     | intersect: -14030360284.75655
[2025-11-21 10:35:00] 2025-11-21 15:34:13,585 | INFO     | chi2: 5.491787859387665
[2025-11-21 10:35:00] 2025-11-21 15:34:13,586 | INFO     | sum of square deviations: 112864483223.12164
[2025-11-21 10:35:00] 2025-11-21 15:34:13,600 | INFO     | sum of deviations: 1129590962015.4927
[2025-11-21 10:35:00] 2025-11-21 15:34:13,600 | INFO     | mean x: 1763717133.894958
[2025-11-21 10:35:00] 2025-11-21 15:34:13,600 | INFO     | mean y: 2954248.8865546216
[2025-11-21 10:35:00] 2025-11-21 15:34:13,601 | INFO     | intersect: -17649002124.856632
[2025-11-21 10:35:00] 2025-11-21 15:34:13,602 | INFO     | chi2: 3.0349054388855987
[2025-11-21 10:35:00] 2025-11-21 15:34:13,602 | INFO     | current chi2=3.0349054388855987 (change=44.73738759413786 %)
[2025-11-21 10:35:00] 2025-11-21 15:34:13,603 | INFO     | sum of square deviations: 110509948339.83846
[2025-11-21 10:35:00] 2025-11-21 15:34:13,616 | INFO     | sum of deviations: 1237903088688.752
[2025-11-21 10:35:00] 2025-11-21 15:34:13,617 | INFO     | mean x: 1763716981.3977432
[2025-11-21 10:35:00] 2025-11-21 15:34:13,617 | INFO     | mean y: 2961260.9689703807
[2025-11-21 10:35:00] 2025-11-21 15:34:13,617 | INFO     | intersect: -19753727902.71596
[2025-11-21 10:35:00] 2025-11-21 15:34:13,618 | INFO     | chi2: 2.287856630893225
[2025-11-21 10:35:00] 2025-11-21 15:34:13,618 | INFO     | current chi2=2.287856630893225 (change=24.615225186939803 %)
[2025-11-21 10:35:00] 2025-11-21 15:34:13,618 | INFO     | right removable region: 708
[2025-11-21 10:35:00] 2025-11-21 15:34:13,619 | INFO     | sum of square deviations: 112864354817.91019
[2025-11-21 10:35:00] 2025-11-21 15:34:13,633 | INFO     | sum of deviations: 726327154050.5902
[2025-11-21 10:35:00] 2025-11-21 15:34:13,633 | INFO     | mean x: 1763717438.8935573
[2025-11-21 10:35:00] 2025-11-21 15:34:13,633 | INFO     | mean y: 2952834.8893557424
[2025-11-21 10:35:00] 2025-11-21 15:34:13,633 | INFO     | intersect: -11347272575.14124
[2025-11-21 10:35:00] 2025-11-21 15:34:13,634 | INFO     | chi2: 3.473013798068128
[2025-11-21 10:35:00] 2025-11-21 15:34:13,635 | INFO     | current chi2=3.473013798068128 (change=36.75986970014954 %)
[2025-11-21 10:35:00] 2025-11-21 15:34:13,636 | INFO     | sum of square deviations: 110509909662.33582
[2025-11-21 10:35:00] 2025-11-21 15:34:13,649 | INFO     | sum of deviations: 679865716692.7635
[2025-11-21 10:35:00] 2025-11-21 15:34:13,649 | INFO     | mean x: 1763717591.3878703
[2025-11-21 10:35:00] 2025-11-21 15:34:13,649 | INFO     | mean y: 2955843.1354019744
[2025-11-21 10:35:00] 2025-11-21 15:34:13,649 | INFO     | intersect: -10847574466.557045
[2025-11-21 10:35:00] 2025-11-21 15:34:13,650 | INFO     | chi2: 3.428171464913721
[2025-11-21 10:35:00] 2025-11-21 15:34:13,651 | INFO     | current chi2=3.428171464913721 (change=1.2911648430349003 %)
[2025-11-21 10:35:00] 2025-11-21 15:34:13,651 | INFO     | left removable region: 20
[2025-11-21 10:35:00] 2025-11-21 15:34:13,652 | INFO     | sum of square deviations: 100978220941.60449
[2025-11-21 10:35:00] 2025-11-21 15:34:13,665 | INFO     | sum of deviations: 950336390724.7085
[2025-11-21 10:35:00] 2025-11-21 15:34:13,665 | INFO     | mean x: 1763717560.889535
[2025-11-21 10:35:00] 2025-11-21 15:34:13,665 | INFO     | mean y: 2981521.1540697673
[2025-11-21 10:35:00] 2025-11-21 15:34:13,665 | INFO     | intersect: -16595894607.22263
[2025-11-21 10:35:00] 2025-11-21 15:34:13,666 | INFO     | chi2: 0.16020839066093123
[2025-11-21 10:35:00] 2025-11-21 15:34:13,666 | INFO     | current memory leak: 9.41 B/s (using 688 data points, chi2=0.16)
[2025-11-21 10:35:00] 2025-11-21 15:34:13,667 | INFO     | could have reported an average CPU frequency of 2717 MHz (28 samples)
[2025-11-21 10:35:00] 2025-11-21 15:34:13,668 | INFO     | ..............................
[2025-11-21 10:35:00] 2025-11-21 15:34:13,668 | INFO     | . Timing measurements:
[2025-11-21 10:35:00] 2025-11-21 15:34:13,668 | INFO     | . get job = 0 s
[2025-11-21 10:35:00] 2025-11-21 15:34:13,668 | INFO     | . initial setup = 2 s
[2025-11-21 10:35:00] 2025-11-21 15:34:13,668 | INFO     | . payload setup = 5 s
[2025-11-21 10:35:00] 2025-11-21 15:34:13,668 | INFO     | . stage-in = 0 s
[2025-11-21 10:35:00] 2025-11-21 15:34:13,668 | INFO     | . payload execution = 43856 s
[2025-11-21 10:35:00] 2025-11-21 15:34:13,668 | INFO     | . stage-out = 3 s
[2025-11-21 10:35:00] 2025-11-21 15:34:13,669 | INFO     | . log creation = 0 s
[2025-11-21 10:35:00] 2025-11-21 15:34:13,669 | INFO     | ..............................
[2025-11-21 10:35:00] 2025-11-21 15:34:13,774 | INFO     | 
[2025-11-21 10:35:00] 2025-11-21 15:34:13,775 | INFO     | job summary report
[2025-11-21 10:35:00] 2025-11-21 15:34:13,775 | INFO     | --------------------------------------------------
[2025-11-21 10:35:00] 2025-11-21 15:34:13,775 | INFO     | PanDA job id: 6893835383
[2025-11-21 10:35:00] 2025-11-21 15:34:13,775 | INFO     | task id: 47523449
[2025-11-21 10:35:00] 2025-11-21 15:34:13,775 | INFO     | errors: (none)
[2025-11-21 10:35:00] 2025-11-21 15:34:13,775 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 10:35:00] 2025-11-21 15:34:13,775 | INFO     | pilot state: finished 
[2025-11-21 10:35:00] 2025-11-21 15:34:13,776 | INFO     | transexitcode: 0
[2025-11-21 10:35:00] 2025-11-21 15:34:13,776 | INFO     | exeerrorcode: 0
[2025-11-21 10:35:00] 2025-11-21 15:34:13,776 | INFO     | exeerrordiag: 
[2025-11-21 10:35:00] 2025-11-21 15:34:13,776 | INFO     | exitcode: 0
[2025-11-21 10:35:00] 2025-11-21 15:34:13,776 | INFO     | exitmsg: OK
[2025-11-21 10:35:00] 2025-11-21 15:34:13,776 | INFO     | cpuconsumptiontime: 325407 s
[2025-11-21 10:35:00] 2025-11-21 15:34:13,776 | INFO     | nevents: 1000
[2025-11-21 10:35:00] 2025-11-21 15:34:13,776 | INFO     | neventsw: 0
[2025-11-21 10:35:00] 2025-11-21 15:34:13,777 | INFO     | pid: 976233
[2025-11-21 10:35:00] 2025-11-21 15:34:13,777 | INFO     | pgrp: 976233
[2025-11-21 10:35:00] 2025-11-21 15:34:13,777 | INFO     | corecount: 8
[2025-11-21 10:35:00] 2025-11-21 15:34:13,777 | INFO     | event service: False
[2025-11-21 10:35:00] 2025-11-21 15:34:13,777 | INFO     | sizes: {0: 2297975, 1: 2298831, 5: 2299093, 12: 2299149, 43865: 2344449, 43866: 2344448, 43870: 2353626, 43873: 2353682, 43878: 2353928}
[2025-11-21 10:35:00] 2025-11-21 15:34:13,777 | INFO     | --------------------------------------------------
[2025-11-21 10:35:00] 2025-11-21 15:34:13,777 | INFO     | 
[2025-11-21 10:35:00] 2025-11-21 15:34:13,778 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-21 10:35:00] 2025-11-21 15:34:13,796 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 10:35:00] 2025-11-21 15:34:13,796 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 10:35:00] 2025-11-21 15:34:13,796 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 10:35:00] 2025-11-21 15:34:13,796 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 10:35:00] 2025-11-21 15:34:13,796 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 10:35:00] 2025-11-21 15:34:13,797 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 10:35:00] 2025-11-21 15:34:13,797 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 10:35:00] 2025-11-21 15:34:13,797 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 10:35:00] 2025-11-21 15:34:13,797 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 10:35:00] 2025-11-21 15:34:13,797 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 10:35:00] 2025-11-21 15:34:13,797 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 10:35:00] 2025-11-21 15:34:13,797 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 10:35:00] 2025-11-21 15:34:13,798 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 10:35:00] 2025-11-21 15:34:13,798 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 10:35:00] 2025-11-21 15:34:13,798 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 10:35:00] 2025-11-21 15:34:13,798 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 10:35:00] 2025-11-21 15:34:13,798 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 10:35:00] 2025-11-21 15:34:13,798 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 10:35:00] 2025-11-21 15:34:13,799 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 10:35:00] 2025-11-21 15:34:13,799 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 10:35:00] 2025-11-21 15:34:13,799 | INFO     | job 6893835383 has completed (purged errors)
[2025-11-21 10:35:00] 2025-11-21 15:34:13,799 | INFO     | overall cleanup function is called
[2025-11-21 10:35:00] 2025-11-21 15:34:14,816 | INFO     | --- collectZombieJob: --- 10, [976233]
[2025-11-21 10:35:00] 2025-11-21 15:34:14,816 | INFO     | zombie collector waiting for pid 976233
[2025-11-21 10:35:00] 2025-11-21 15:34:14,840 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 10:35:00] 2025-11-21 15:34:14,841 | INFO     | collected zombie processes
[2025-11-21 10:35:00] 2025-11-21 15:34:14,841 | INFO     | will attempt to kill all subprocesses of pid=976233
[2025-11-21 10:35:00] 2025-11-21 15:34:15,127 | INFO     | process IDs to be killed: [976233] (in reverse order)
[2025-11-21 10:35:00] 2025-11-21 15:34:15,201 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 10:35:00] 2025-11-21 15:34:15,202 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 10:35:00] 2025-11-21 15:34:15,210 | INFO     | did not find any defunct processes belonging to 976233
[2025-11-21 10:35:00] 2025-11-21 15:34:15,216 | INFO     | did not find any defunct processes belonging to 976233
[2025-11-21 10:35:00] 2025-11-21 15:34:15,217 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 10:35:00] 2025-11-21 15:34:15,218 | INFO     | ready for new job
[2025-11-21 10:35:00] 2025-11-21 15:34:15,218 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 10:35:00] 2025-11-21 15:34:15,222 | INFO     | ***************************************
[2025-11-21 10:35:00] 2025-11-21 15:34:15,222 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 10:35:00] 2025-11-21 15:34:15,222 | INFO     | ***************************************
[2025-11-21 10:35:00] 2025-11-21 15:34:15,222 | INFO     | 
[2025-11-21 10:35:00] 2025-11-21 15:34:15,225 | INFO     | architecture information:
[2025-11-21 10:35:00] 2025-11-21 15:34:15,226 | INFO     | executing command: cat /etc/os-release
[2025-11-21 10:35:00] 2025-11-21 15:34:15,239 | INFO     | cat /etc/os-release:
[2025-11-21 10:35:00] NAME="CentOS Linux"
[2025-11-21 10:35:00] VERSION="7 (Core)"
[2025-11-21 10:35:00] ID="centos"
[2025-11-21 10:35:00] ID_LIKE="rhel fedora"
[2025-11-21 10:35:00] VERSION_ID="7"
[2025-11-21 10:35:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 10:35:00] ANSI_COLOR="0;31"
[2025-11-21 10:35:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 10:35:00] HOME_URL="https://www.centos.org/"
[2025-11-21 10:35:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 10:35:00] 
[2025-11-21 10:35:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 10:35:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 10:35:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 10:35:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 10:35:00] 
[2025-11-21 10:35:00] 2025-11-21 15:34:15,240 | INFO     | ***************************************
[2025-11-21 10:35:00] 2025-11-21 15:34:15,742 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-21 10:35:00] 2025-11-21 15:34:15,757 | INFO     | sufficient remaining disk space (56909365248 B)
[2025-11-21 10:35:00] 2025-11-21 15:34:15,757 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 10:35:00] 2025-11-21 15:34:15,757 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 10:35:00] 2025-11-21 15:34:15,757 | INFO     | update_server=False
[2025-11-21 10:35:00] 2025-11-21 15:34:15,758 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 10:35:00] 2025-11-21 15:34:15,758 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 10:35:00] 2025-11-21 15:34:15,758 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 10:35:00] 2025-11-21 15:34:15,900 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 10:35:00] 2025-11-21 15:34:15,900 | INFO     | aborting loop
[2025-11-21 10:35:00] 2025-11-21 15:34:16,535 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 10:35:00] 2025-11-21 15:34:16,724 | INFO     | all data control threads have been joined
[2025-11-21 10:35:00] 2025-11-21 15:34:16,762 | INFO     | [job] queue monitor thread has finished
[2025-11-21 10:35:00] 2025-11-21 15:34:16,763 | INFO     | [job] retrieve thread has finished
[2025-11-21 10:35:00] 2025-11-21 15:34:16,906 | INFO     | [job] job monitor thread has finished
[2025-11-21 10:35:00] 2025-11-21 15:34:16,913 | INFO     | all payload control threads have been joined
[2025-11-21 10:35:00] 2025-11-21 15:34:16,955 | INFO     | [data] copytool_in thread has finished
[2025-11-21 10:35:00] 2025-11-21 15:34:17,214 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 10:35:00] 2025-11-21 15:34:17,219 | INFO     | all job control threads have been joined
[2025-11-21 10:35:00] 2025-11-21 15:34:17,505 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 10:35:00] 2025-11-21 15:34:17,690 | INFO     | [payload] validate_post thread has finished
[2025-11-21 10:35:00] 2025-11-21 15:34:17,716 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 10:35:00] 2025-11-21 15:34:17,725 | INFO     | [data] control thread has finished
[2025-11-21 10:35:00] 2025-11-21 15:34:17,781 | INFO     | [job] validate thread has finished
[2025-11-21 10:35:00] 2025-11-21 15:34:17,918 | INFO     | [payload] control thread has finished
[2025-11-21 10:35:00] 2025-11-21 15:34:18,005 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 10:35:00] 2025-11-21 15:34:18,094 | INFO     | [payload] failed_post thread has finished
[2025-11-21 10:35:00] 2025-11-21 15:34:18,224 | INFO     | [job] control thread has finished
[2025-11-21 10:35:00] 2025-11-21 15:34:18,540 | INFO     | [data] copytool_out thread has finished
[2025-11-21 10:35:00] 2025-11-21 15:34:19,764 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 10:35:00] 2025-11-21 15:34:45,403 | INFO     | PID=969827 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-21 10:35:00] 2025-11-21 15:34:45,403 | INFO     | .. there are 6 such processes running
[2025-11-21 10:35:00] 2025-11-21 15:34:45,404 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 10:35:00] 2025-11-21 15:34:45,404 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 10:35:00] 2025-11-21 15:34:45,404 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 10:35:00] 2025-11-21 15:34:54,770 | INFO     | [monitor] cgroup control has ended
[2025-11-21 10:35:00] 2025-11-21 15:34:55,620 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139660096833344)>', '<ExcThread(monitor, started 139659384452864)>']
[2025-11-21 10:35:00] 2025-11-21 15:34:56,442 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 10:35:00] 2025-11-21 15:34:56,465 | INFO     | [monitor] control thread has ended
[2025-11-21 10:35:00] 2025-11-21 15:35:00,645 | INFO     | all workflow threads have been joined
[2025-11-21 10:35:00] 2025-11-21 15:35:00,645 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 10:35:00] 2025-11-21 15:35:00,646 | INFO     | traces error code: 0
[2025-11-21 10:35:00] 2025-11-21 15:35:00,646 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 10:35:00] 2025-11-21 15:35:00,749 [wrapper] ==== pilot stdout END ====
[2025-11-21 10:35:00] 2025-11-21 15:35:00,752 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 10:35:00] 2025-11-21 15:35:00,754 [wrapper] pilotpid: 969827
[2025-11-21 10:35:00] 2025-11-21 15:35:00,757 [wrapper] Pilot exit status: 0
[2025-11-21 10:35:00] 2025-11-21 15:35:00,766 [wrapper] pandaids: 6893835383
[2025-11-21 10:35:00] 2025-11-21 15:35:00,814 [wrapper] cleanup supervisor_pilot 1993050 969828
[2025-11-21 10:35:00] 2025-11-21 15:35:00,817 [wrapper] Test setup, not cleaning
[2025-11-21 10:35:00] 2025-11-21 15:35:00,820 [wrapper] apfmon messages muted
[2025-11-21 10:35:00] 2025-11-21 15:35:00,822 [wrapper] ==== wrapper stdout END ====
[2025-11-21 10:35:00] 2025-11-21 15:35:00,824 [wrapper] ==== wrapper stderr END ====
[2025-11-21 10:35:00]  *** Error codes and diagnostics ***
[2025-11-21 10:35:00]     "exeErrorCode": 0,
[2025-11-21 10:35:00]     "exeErrorDiag": "",
[2025-11-21 10:35:00]     "pilotErrorCode": 0,
[2025-11-21 10:35:00]     "pilotErrorDiag": "",
[2025-11-21 10:35:00]  *** Listing of results directory ***
[2025-11-21 10:35:00] total 1332476
[2025-11-21 10:35:00] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 05:06 pilot3.tar.gz
[2025-11-21 10:35:00] -rwx------. 1 boincer umatlas     36292 Nov 20 05:14 runpilot2-wrapper.sh
[2025-11-21 10:35:00] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 05:14 queuedata.json
[2025-11-21 10:35:00] -rw-r--r--. 1 boincer umatlas       100 Nov 20 22:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 10:35:00] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 20 22:22 run_atlas
[2025-11-21 10:35:00] -rw-r--r--. 1 boincer umatlas       105 Nov 20 22:22 job.xml
[2025-11-21 10:35:00] -rw-r--r--. 2 boincer umatlas 412318887 Nov 20 22:22 EVNT.47493127._000088.pool.root.1
[2025-11-21 10:35:00] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 22:22 start_atlas.sh
[2025-11-21 10:35:00] drwxrwx--x. 2 boincer umatlas      4096 Nov 20 22:22 shared
[2025-11-21 10:35:00] -rw-r--r--. 2 boincer umatlas    590100 Nov 20 22:22 input.tar.gz
[2025-11-21 10:35:00] -rw-r--r--. 1 boincer umatlas         0 Nov 20 22:22 boinc_lockfile
[2025-11-21 10:35:00] -rw-r--r--. 1 boincer umatlas      2784 Nov 20 22:22 pandaJob.out
[2025-11-21 10:35:00] -rw-------. 1 boincer umatlas        57 Nov 20 22:22 setup.sh.local
[2025-11-21 10:35:00] -rw-------. 1 boincer umatlas    989817 Nov 20 22:22 agis_schedconf.cvmfs.json
[2025-11-21 10:35:00] drwx------. 5 boincer umatlas      4096 Nov 20 22:22 pilot3
[2025-11-21 10:35:00] -rw-r--r--. 1 boincer umatlas       533 Nov 21 10:19 boinc_task_state.xml
[2025-11-21 10:35:00] -rw-r--r--. 1 boincer umatlas      6618 Nov 21 10:27 init_data.xml
[2025-11-21 10:35:00] -rw-------. 1 boincer umatlas 932075793 Nov 21 10:33 HITS.47523449._000877.pool.root.1
[2025-11-21 10:35:00] -rw-------. 1 boincer umatlas      1049 Nov 21 10:33 memory_monitor_summary.json
[2025-11-21 10:35:00] -rw-------. 1 boincer umatlas   1526164 Nov 21 10:34 agis_ddmendpoints.agis.ALL.json
[2025-11-21 10:35:00] -rw-------. 1 boincer umatlas   1974938 Nov 21 10:34 log.47523449._000877.job.log.tgz.1
[2025-11-21 10:35:00] -rw-------. 1 boincer umatlas      8619 Nov 21 10:34 heartbeat.json
[2025-11-21 10:35:00] -rw-------. 1 boincer umatlas        95 Nov 21 10:34 pilot_heartbeat.json
[2025-11-21 10:35:00] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 10:34 boinc_mmap_file
[2025-11-21 10:35:00] -rw-r--r--. 1 boincer umatlas        29 Nov 21 10:34 wrapper_checkpoint.txt
[2025-11-21 10:35:00] -rw-------. 1 boincer umatlas      4822 Nov 21 10:35 pilotlog.txt
[2025-11-21 10:35:00] -rw-------. 1 boincer umatlas   6094173 Nov 21 10:35 log.47523449._000877.job.log.1
[2025-11-21 10:35:00] -rw-------. 1 boincer umatlas       353 Nov 21 10:35 output.list
[2025-11-21 10:35:00] -rw-r--r--. 1 boincer umatlas       620 Nov 21 10:35 runtime_log
[2025-11-21 10:35:00] -rw-------. 1 boincer umatlas   8089600 Nov 21 10:35 result.tar.gz
[2025-11-21 10:35:00] -rw-------. 1 boincer umatlas       660 Nov 21 10:35 umFLDmcrGg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmCHGKDmUsweQo.diag
[2025-11-21 10:35:00] -rw-r--r--. 1 boincer umatlas      9343 Nov 21 10:35 runtime_log.err
[2025-11-21 10:35:00] -rw-r--r--. 1 boincer umatlas     21344 Nov 21 10:35 stderr.txt
[2025-11-21 10:35:00] HITS file was successfully produced:
[2025-11-21 10:35:00] -rw-------. 1 boincer umatlas 932075793 Nov 21 10:33 shared/HITS.pool.root.1
[2025-11-21 10:35:00]  *** Contents of shared directory: ***
[2025-11-21 10:35:00] total 1321388
[2025-11-21 10:35:00] -rw-r--r--. 2 boincer umatlas 412318887 Nov 20 22:22 ATLAS.root_0
[2025-11-21 10:35:00] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 22:22 start_atlas.sh
[2025-11-21 10:35:00] -rw-r--r--. 2 boincer umatlas    590100 Nov 20 22:22 input.tar.gz
[2025-11-21 10:35:00] -rw-------. 1 boincer umatlas 932075793 Nov 21 10:33 HITS.pool.root.1
[2025-11-21 10:35:00] -rw-------. 1 boincer umatlas   8089600 Nov 21 10:35 result.tar.gz
10:35:22 (966156): run_atlas exited; CPU time 326076.134221
10:35:22 (966156): called boinc_finish(0)

</stderr_txt>
]]>

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