Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:16:01 (16989): wrapper (7.7.26015): starting
03:16:01 (16989): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 03:16:01] Arguments: --nthreads 8
[2025-11-23 03:16:01] Threads: 8
[2025-11-23 03:16:01] Checking for CVMFS
[2025-11-23 03:16:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 03:16:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 03:16:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 03:16:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 03:16:04] 2.11.2.0 12000 217598 137896 153193 3 47 17318641 25165825 4462 130560 2 105315739 99.908 41351456 3239 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-23 03:16:04] CVMFS is ok
[2025-11-23 03:16:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 03:16:04] Checking for apptainer binary...
[2025-11-23 03:16:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 03:16:04] Running /usr/bin/apptainer --version
[2025-11-23 03:16:04] apptainer version 1.3.2-1.el7
[2025-11-23 03:16:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 03:16:14] cg-vwn246.simple-grid.lan
[2025-11-23 03:16:14] apptainer works
[2025-11-23 03:16:14] Set ATHENA_PROC_NUMBER=8
[2025-11-23 03:16:14] Set ATHENA_CORE_NUMBER=8
[2025-11-23 03:16:14] Starting ATLAS job with PandaID=6893835342
[2025-11-23 03:16:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 05:05:47]  *** The last 200 lines of the pilot log: ***
[2025-11-24 05:05:48] 2025-11-24 04:04:52,143 | INFO     | monitor loop #6225: job 0:6893835342 is in state 'finished'
[2025-11-24 05:05:48] 2025-11-24 04:04:52,143 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 05:05:48] 2025-11-24 04:04:52,403 | INFO     | time since job start (92695s) is within the limit (172800.0s)
[2025-11-24 05:05:48] 2025-11-24 04:04:54,410 | INFO     | time since job start (92697s) is within the limit (172800.0s)
[2025-11-24 05:05:48] 2025-11-24 04:04:54,655 | INFO     | monitor loop #6226: job 0:6893835342 is in state 'finished'
[2025-11-24 05:05:48] 2025-11-24 04:04:54,655 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 05:05:48] 2025-11-24 04:04:56,419 | INFO     | time since job start (92699s) is within the limit (172800.0s)
[2025-11-24 05:05:48] 2025-11-24 04:04:56,419 | INFO     | 92704s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-24 05:05:48] 2025-11-24 04:04:57,168 | INFO     | monitor loop #6227: job 0:6893835342 is in state 'finished'
[2025-11-24 05:05:48] 2025-11-24 04:04:57,168 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 05:05:48] 2025-11-24 04:04:58,426 | INFO     | time since job start (92701s) is within the limit (172800.0s)
[2025-11-24 05:05:48] 2025-11-24 04:04:59,672 | INFO     | monitor loop #6228: job 0:6893835342 is in state 'finished'
[2025-11-24 05:05:48] 2025-11-24 04:04:59,672 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 05:05:48] 2025-11-24 04:05:00,433 | INFO     | time since job start (92703s) is within the limit (172800.0s)
[2025-11-24 05:05:48] 2025-11-24 04:05:00,730 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 05:05:48] 2025-11-24 04:05:00,732 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-24 05:05:48] 2025-11-24 04:05:00,734 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6893835342/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 05:05:48] 2025-11-24 04:05:00,735 | INFO     | extracted standard info from prmon json
[2025-11-24 05:05:48] 2025-11-24 04:05:00,735 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 05:05:48] 2025-11-24 04:05:00,735 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 05:05:48] 2025-11-24 04:05:00,796 | INFO     | fitting pss+swap vs Time
[2025-11-24 05:05:48] 2025-11-24 04:05:00,799 | INFO     | sum of square deviations: 1069724972986.9614
[2025-11-24 05:05:48] 2025-11-24 04:05:00,888 | INFO     | sum of deviations: 3569537848267.6514
[2025-11-24 05:05:48] 2025-11-24 04:05:00,889 | INFO     | mean x: 1763910937.3884845
[2025-11-24 05:05:48] 2025-11-24 04:05:00,889 | INFO     | mean y: 2843673.888153541
[2025-11-24 05:05:48] 2025-11-24 04:05:00,889 | INFO     | intersect: -5883105528.924569
[2025-11-24 05:05:48] 2025-11-24 04:05:00,891 | INFO     | chi2: 23.04856590714853
[2025-11-24 05:05:48] 2025-11-24 04:05:00,893 | INFO     | sum of square deviations: 1059141349299.7874
[2025-11-24 05:05:48] 2025-11-24 04:05:00,957 | INFO     | sum of deviations: 4067589893236.9907
[2025-11-24 05:05:48] 2025-11-24 04:05:00,957 | INFO     | mean x: 1763910784.8930943
[2025-11-24 05:05:48] 2025-11-24 04:05:00,957 | INFO     | mean y: 2850849.2981407703
[2025-11-24 05:05:48] 2025-11-24 04:05:00,958 | INFO     | intersect: -6771377808.610721
[2025-11-24 05:05:48] 2025-11-24 04:05:00,959 | INFO     | chi2: 19.862428184029767
[2025-11-24 05:05:48] 2025-11-24 04:05:00,960 | INFO     | current chi2=19.862428184029767 (change=13.823583367200207 %)
[2025-11-24 05:05:48] 2025-11-24 04:05:00,960 | INFO     | right removable region: 1505
[2025-11-24 05:05:48] 2025-11-24 04:05:00,962 | INFO     | sum of square deviations: 1059140069519.7885
[2025-11-24 05:05:48] 2025-11-24 04:05:01,033 | INFO     | sum of deviations: 2932216949850.988
[2025-11-24 05:05:48] 2025-11-24 04:05:01,034 | INFO     | mean x: 1763911089.8930943
[2025-11-24 05:05:48] 2025-11-24 04:05:01,034 | INFO     | mean y: 2852855.7576361224
[2025-11-24 05:05:48] 2025-11-24 04:05:01,034 | INFO     | intersect: -4880514457.651355
[2025-11-24 05:05:48] 2025-11-24 04:05:01,036 | INFO     | chi2: 18.312388604701756
[2025-11-24 05:05:48] 2025-11-24 04:05:01,036 | INFO     | current chi2=18.312388604701756 (change=20.548685421585578 %)
[2025-11-24 05:05:48] 2025-11-24 04:05:01,036 | INFO     | left removable region: 10
[2025-11-24 05:05:48] 2025-11-24 04:05:01,038 | INFO     | sum of square deviations: 1036101058523.7852
[2025-11-24 05:05:48] 2025-11-24 04:05:01,118 | INFO     | sum of deviations: 3024036719499.0083
[2025-11-24 05:05:48] 2025-11-24 04:05:01,119 | INFO     | mean x: 1763911059.4033444
[2025-11-24 05:05:48] 2025-11-24 04:05:01,119 | INFO     | mean y: 2869201.958528428
[2025-11-24 05:05:48] 2025-11-24 04:05:01,119 | INFO     | intersect: -5145404482.04491
[2025-11-24 05:05:48] 2025-11-24 04:05:01,121 | INFO     | chi2: 11.34412878483785
[2025-11-24 05:05:48] 2025-11-24 04:05:01,122 | INFO     | current memory leak: 2.92 B/s (using 1495 data points, chi2=11.34)
[2025-11-24 05:05:48] 2025-11-24 04:05:01,124 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-24 05:05:48] 2025-11-24 04:05:01,124 | INFO     | ..............................
[2025-11-24 05:05:48] 2025-11-24 04:05:01,124 | INFO     | . Timing measurements:
[2025-11-24 05:05:48] 2025-11-24 04:05:01,124 | INFO     | . get job = 0 s
[2025-11-24 05:05:48] 2025-11-24 04:05:01,125 | INFO     | . initial setup = 4 s
[2025-11-24 05:05:48] 2025-11-24 04:05:01,125 | INFO     | . payload setup = 134 s
[2025-11-24 05:05:48] 2025-11-24 04:05:01,125 | INFO     | . stage-in = 0 s
[2025-11-24 05:05:48] 2025-11-24 04:05:01,125 | INFO     | . payload execution = 92273 s
[2025-11-24 05:05:48] 2025-11-24 04:05:01,125 | INFO     | . stage-out = 5 s
[2025-11-24 05:05:48] 2025-11-24 04:05:01,125 | INFO     | . log creation = 2 s
[2025-11-24 05:05:48] 2025-11-24 04:05:01,125 | INFO     | ..............................
[2025-11-24 05:05:48] 2025-11-24 04:05:01,641 | INFO     | 
[2025-11-24 05:05:48] 2025-11-24 04:05:01,641 | INFO     | job summary report
[2025-11-24 05:05:48] 2025-11-24 04:05:01,641 | INFO     | --------------------------------------------------
[2025-11-24 05:05:48] 2025-11-24 04:05:01,641 | INFO     | PanDA job id: 6893835342
[2025-11-24 05:05:48] 2025-11-24 04:05:01,642 | INFO     | task id: 47523449
[2025-11-24 05:05:48] 2025-11-24 04:05:01,642 | INFO     | errors: (none)
[2025-11-24 05:05:48] 2025-11-24 04:05:01,642 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 05:05:48] 2025-11-24 04:05:01,642 | INFO     | pilot state: finished 
[2025-11-24 05:05:48] 2025-11-24 04:05:01,642 | INFO     | transexitcode: 0
[2025-11-24 05:05:48] 2025-11-24 04:05:01,642 | INFO     | exeerrorcode: 0
[2025-11-24 05:05:48] 2025-11-24 04:05:01,642 | INFO     | exeerrordiag: 
[2025-11-24 05:05:48] 2025-11-24 04:05:01,642 | INFO     | exitcode: 0
[2025-11-24 05:05:48] 2025-11-24 04:05:01,642 | INFO     | exitmsg: OK
[2025-11-24 05:05:48] 2025-11-24 04:05:01,642 | INFO     | cpuconsumptiontime: 333881 s
[2025-11-24 05:05:48] 2025-11-24 04:05:01,643 | INFO     | nevents: 1000
[2025-11-24 05:05:48] 2025-11-24 04:05:01,643 | INFO     | neventsw: 0
[2025-11-24 05:05:48] 2025-11-24 04:05:01,643 | INFO     | pid: 27437
[2025-11-24 05:05:48] 2025-11-24 04:05:01,643 | INFO     | pgrp: 27437
[2025-11-24 05:05:48] 2025-11-24 04:05:01,643 | INFO     | corecount: 8
[2025-11-24 05:05:48] 2025-11-24 04:05:01,643 | INFO     | event service: False
[2025-11-24 05:05:48] 2025-11-24 04:05:01,643 | INFO     | sizes: {0: 2297975, 1: 2298660, 2: 2298859, 13: 2298859, 23: 2298915, 34: 2298943, 45: 2299099, 56: 2299127, 66: 2299155, 77: 2299183, 88: 2299239, 96: 2299809, 98
[2025-11-24 05:05:48] 2025-11-24 04:05:01,643 | INFO     | --------------------------------------------------
[2025-11-24 05:05:48] 2025-11-24 04:05:01,643 | INFO     | 
[2025-11-24 05:05:48] 2025-11-24 04:05:01,644 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-11-24 05:05:48] 2025-11-24 04:05:02,085 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 05:05:48] 2025-11-24 04:05:02,085 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 05:05:48] 2025-11-24 04:05:02,085 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 05:05:48] 2025-11-24 04:05:02,085 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 05:05:48] 2025-11-24 04:05:02,085 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 05:05:48] 2025-11-24 04:05:02,085 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 05:05:48] 2025-11-24 04:05:02,086 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 05:05:48] 2025-11-24 04:05:02,086 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 05:05:48] 2025-11-24 04:05:02,086 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 05:05:48] 2025-11-24 04:05:02,086 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 05:05:48] 2025-11-24 04:05:02,086 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 05:05:48] 2025-11-24 04:05:02,086 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 05:05:48] 2025-11-24 04:05:02,086 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 05:05:48] 2025-11-24 04:05:02,086 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 05:05:48] 2025-11-24 04:05:02,086 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 05:05:48] 2025-11-24 04:05:02,086 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 05:05:48] 2025-11-24 04:05:02,087 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 05:05:48] 2025-11-24 04:05:02,087 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 05:05:48] 2025-11-24 04:05:02,087 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 05:05:48] 2025-11-24 04:05:02,087 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 05:05:48] 2025-11-24 04:05:02,087 | INFO     | job 6893835342 has completed (purged errors)
[2025-11-24 05:05:48] 2025-11-24 04:05:02,087 | INFO     | overall cleanup function is called
[2025-11-24 05:05:48] 2025-11-24 04:05:03,106 | INFO     | --- collectZombieJob: --- 10, [27437]
[2025-11-24 05:05:48] 2025-11-24 04:05:03,106 | INFO     | zombie collector waiting for pid 27437
[2025-11-24 05:05:48] 2025-11-24 04:05:03,107 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 05:05:48] 2025-11-24 04:05:03,107 | INFO     | collected zombie processes
[2025-11-24 05:05:48] 2025-11-24 04:05:03,107 | INFO     | will attempt to kill all subprocesses of pid=27437
[2025-11-24 05:05:48] 2025-11-24 04:05:03,236 | INFO     | process IDs to be killed: [27437] (in reverse order)
[2025-11-24 05:05:48] 2025-11-24 04:05:03,589 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 05:05:48] 2025-11-24 04:05:03,589 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 05:05:48] 2025-11-24 04:05:03,593 | INFO     | did not find any defunct processes belonging to 27437
[2025-11-24 05:05:48] 2025-11-24 04:05:03,600 | INFO     | did not find any defunct processes belonging to 27437
[2025-11-24 05:05:48] 2025-11-24 04:05:03,641 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 05:05:48] 2025-11-24 04:05:03,642 | INFO     | ready for new job
[2025-11-24 05:05:48] 2025-11-24 04:05:03,642 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 05:05:48] 2025-11-24 04:05:03,649 | INFO     | ***************************************
[2025-11-24 05:05:48] 2025-11-24 04:05:03,649 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 05:05:48] 2025-11-24 04:05:03,649 | INFO     | ***************************************
[2025-11-24 05:05:48] 2025-11-24 04:05:03,650 | INFO     | 
[2025-11-24 05:05:48] 2025-11-24 04:05:03,650 | INFO     | pilot is running in a VM
[2025-11-24 05:05:48] 2025-11-24 04:05:03,650 | INFO     | architecture information:
[2025-11-24 05:05:48] 2025-11-24 04:05:03,657 | INFO     | executing command: cat /etc/os-release
[2025-11-24 05:05:48] 2025-11-24 04:05:03,822 | INFO     | cat /etc/os-release:
[2025-11-24 05:05:48] NAME="CentOS Linux"
[2025-11-24 05:05:48] VERSION="7 (Core)"
[2025-11-24 05:05:48] ID="centos"
[2025-11-24 05:05:48] ID_LIKE="rhel fedora"
[2025-11-24 05:05:48] VERSION_ID="7"
[2025-11-24 05:05:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 05:05:48] ANSI_COLOR="0;31"
[2025-11-24 05:05:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 05:05:48] HOME_URL="https://www.centos.org/"
[2025-11-24 05:05:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 05:05:48] 
[2025-11-24 05:05:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 05:05:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 05:05:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 05:05:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 05:05:48] 
[2025-11-24 05:05:48] 2025-11-24 04:05:03,823 | INFO     | ***************************************
[2025-11-24 05:05:48] 2025-11-24 04:05:04,325 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-11-24 05:05:48] 2025-11-24 04:05:04,465 | INFO     | sufficient remaining disk space (495049506816 B)
[2025-11-24 05:05:48] 2025-11-24 04:05:04,465 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 05:05:48] 2025-11-24 04:05:04,465 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 05:05:48] 2025-11-24 04:05:04,465 | INFO     | update_server=False
[2025-11-24 05:05:48] 2025-11-24 04:05:04,466 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 05:05:48] 2025-11-24 04:05:04,467 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 05:05:48] 2025-11-24 04:05:04,545 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 05:05:48] 2025-11-24 04:05:04,674 | INFO     | all job control threads have been joined
[2025-11-24 05:05:48] 2025-11-24 04:05:04,690 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-24 05:05:48] 2025-11-24 04:05:04,690 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-24 05:05:48] 2025-11-24 04:05:04,690 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 05:05:48] 2025-11-24 04:05:04,691 | INFO     | will abort loop
[2025-11-24 05:05:48] 2025-11-24 04:05:04,709 | INFO     | all payload control threads have been joined
[2025-11-24 05:05:48] 2025-11-24 04:05:05,211 | INFO     | all data control threads have been joined
[2025-11-24 05:05:48] 2025-11-24 04:05:05,472 | INFO     | [job] retrieve thread has finished
[2025-11-24 05:05:48] 2025-11-24 04:05:05,680 | INFO     | [job] control thread has finished
[2025-11-24 05:05:48] 2025-11-24 04:05:05,696 | INFO     | [job] job monitor thread has finished
[2025-11-24 05:05:48] 2025-11-24 04:05:05,715 | INFO     | [payload] control thread has finished
[2025-11-24 05:05:48] 2025-11-24 04:05:05,982 | INFO     | [payload] validate_post thread has finished
[2025-11-24 05:05:48] 2025-11-24 04:05:06,082 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 05:05:48] 2025-11-24 04:05:06,158 | INFO     | [job] validate thread has finished
[2025-11-24 05:05:48] 2025-11-24 04:05:06,217 | INFO     | [data] control thread has finished
[2025-11-24 05:05:48] 2025-11-24 04:05:06,295 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 05:05:48] 2025-11-24 04:05:06,382 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 05:05:48] 2025-11-24 04:05:06,420 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 05:05:48] 2025-11-24 04:05:06,552 | INFO     | [data] copytool_out thread has finished
[2025-11-24 05:05:48] 2025-11-24 04:05:06,685 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 05:05:48] 2025-11-24 04:05:06,744 | INFO     | [data] copytool_in thread has finished
[2025-11-24 05:05:48] 2025-11-24 04:05:06,942 | INFO     | [payload] failed_post thread has finished
[2025-11-24 05:05:48] 2025-11-24 04:05:07,301 | INFO     | [job] queue monitor thread has finished
[2025-11-24 05:05:48] 2025-11-24 04:05:08,476 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 05:05:48] 2025-11-24 04:05:33,653 | INFO     | PID=20803 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 05:05:48] 2025-11-24 04:05:33,653 | INFO     | .. there are 9 such processes running
[2025-11-24 05:05:48] 2025-11-24 04:05:33,654 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 05:05:48] 2025-11-24 04:05:33,654 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 05:05:48] 2025-11-24 04:05:33,654 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 05:05:48] 2025-11-24 04:05:37,846 | INFO     | [monitor] cgroup control has ended
[2025-11-24 05:05:48] 2025-11-24 04:05:38,028 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139784246662976)>', '<ExcThread(monitor, started 139783519065856)>']
[2025-11-24 05:05:48] 2025-11-24 04:05:38,684 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 05:05:48] 2025-11-24 04:05:38,684 | INFO     | [monitor] control thread has ended
[2025-11-24 05:05:48] 2025-11-24 04:05:43,054 | INFO     | all workflow threads have been joined
[2025-11-24 05:05:48] 2025-11-24 04:05:43,054 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 05:05:48] 2025-11-24 04:05:43,055 | INFO     | traces error code: 0
[2025-11-24 05:05:48] 2025-11-24 04:05:43,055 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 05:05:48] 2025-11-24 04:05:43,463 [wrapper] ==== pilot stdout END ====
[2025-11-24 05:05:48] 2025-11-24 04:05:43,553 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 05:05:48] 2025-11-24 04:05:43,607 [wrapper] pilotpid: 20803
[2025-11-24 05:05:48] 2025-11-24 04:05:43,688 [wrapper] Pilot exit status: 0
[2025-11-24 05:05:48] 2025-11-24 04:05:44,060 [wrapper] pandaids: 6893835342
[2025-11-24 05:05:48] 2025-11-24 04:05:45,117 [wrapper] cleanup supervisor_pilot 22434 20804
[2025-11-24 05:05:48] 2025-11-24 04:05:45,173 [wrapper] Test setup, not cleaning
[2025-11-24 05:05:48] 2025-11-24 04:05:45,222 [wrapper] apfmon messages muted
[2025-11-24 05:05:48] 2025-11-24 04:05:45,325 [wrapper] ==== wrapper stdout END ====
[2025-11-24 05:05:48] 2025-11-24 04:05:45,426 [wrapper] ==== wrapper stderr END ====
[2025-11-24 05:05:48]  *** Error codes and diagnostics ***
[2025-11-24 05:05:48]     "exeErrorCode": 0,
[2025-11-24 05:05:48]     "exeErrorDiag": "",
[2025-11-24 05:05:48]     "pilotErrorCode": 0,
[2025-11-24 05:05:48]     "pilotErrorDiag": "",
[2025-11-24 05:05:48]  *** Listing of results directory ***
[2025-11-24 05:05:48] total 1313388
[2025-11-24 05:05:48] -rw-r--r--. 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-24 05:05:48] -rwx------. 1 boinc boinc     36292 Nov 20 11:11 runpilot2-wrapper.sh
[2025-11-24 05:05:48] -rw-r--r--. 1 boinc boinc      5112 Nov 20 11:12 queuedata.json
[2025-11-24 05:05:48] -rw-r--r--. 1 boinc boinc       100 Nov 23 03:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 05:05:48] -rwxr-xr-x. 1 boinc boinc      7986 Nov 23 03:16 run_atlas
[2025-11-24 05:05:48] -rw-r--r--. 1 boinc boinc       105 Nov 23 03:16 job.xml
[2025-11-24 05:05:48] -rw-r--r--. 1 boinc boinc      6391 Nov 23 03:16 init_data.xml
[2025-11-24 05:05:48] -rw-r--r--. 2 boinc boinc 407671387 Nov 23 03:16 EVNT.47493127._000084.pool.root.1
[2025-11-24 05:05:48] -rw-r--r--. 2 boinc boinc     15847 Nov 23 03:16 start_atlas.sh
[2025-11-24 05:05:48] drwxrwx--x. 2 boinc boinc        68 Nov 23 03:16 shared
[2025-11-24 05:05:48] -rw-r--r--. 2 boinc boinc    590100 Nov 23 03:16 input.tar.gz
[2025-11-24 05:05:48] -rw-r--r--. 1 boinc boinc         0 Nov 23 03:16 boinc_lockfile
[2025-11-24 05:05:48] -rw-r--r--. 1 boinc boinc      2784 Nov 23 03:16 pandaJob.out
[2025-11-24 05:05:48] -rw-------. 1 boinc boinc    989784 Nov 23 03:19 agis_schedconf.cvmfs.json
[2025-11-24 05:05:48] drwx------. 5 boinc boinc      4096 Nov 23 03:19 pilot3
[2025-11-24 05:05:48] -rw-r--r--. 1 boinc boinc       533 Nov 24 04:37 boinc_task_state.xml
[2025-11-24 05:05:48] -rw-------. 1 boinc boinc 903479103 Nov 24 05:02 HITS.47523449._000836.pool.root.1
[2025-11-24 05:05:48] -rw-------. 1 boinc boinc      1031 Nov 24 05:03 memory_monitor_summary.json
[2025-11-24 05:05:48] -rw-------. 1 boinc boinc   1526164 Nov 24 05:03 agis_ddmendpoints.agis.ALL.json
[2025-11-24 05:05:48] -rw-------. 1 boinc boinc   2574283 Nov 24 05:03 log.47523449._000836.job.log.tgz.1
[2025-11-24 05:05:48] -rw-------. 1 boinc boinc      8625 Nov 24 05:05 heartbeat.json
[2025-11-24 05:05:48] -rw-r--r--. 1 boinc boinc      8192 Nov 24 05:05 boinc_mmap_file
[2025-11-24 05:05:48] -rw-r--r--. 1 boinc boinc        29 Nov 24 05:05 wrapper_checkpoint.txt
[2025-11-24 05:05:48] -rw-------. 1 boinc boinc        95 Nov 24 05:05 pilot_heartbeat.json
[2025-11-24 05:05:48] -rw-------. 1 boinc boinc      5070 Nov 24 05:05 pilotlog.txt
[2025-11-24 05:05:48] -rw-------. 1 boinc boinc  12350525 Nov 24 05:05 log.47523449._000836.job.log.1
[2025-11-24 05:05:48] -rw-------. 1 boinc boinc       353 Nov 24 05:05 output.list
[2025-11-24 05:05:48] -rw-r--r--. 1 boinc boinc       620 Nov 24 05:05 runtime_log
[2025-11-24 05:05:48] -rw-------. 1 boinc boinc  14940160 Nov 24 05:05 result.tar.gz
[2025-11-24 05:05:48] -rw-------. 1 boinc boinc       662 Nov 24 05:05 ZEKODmmoGg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmzEGKDmCKLOTn.diag
[2025-11-24 05:05:48] -rw-r--r--. 1 boinc boinc      8817 Nov 24 05:05 runtime_log.err
[2025-11-24 05:05:48] -rw-r--r--. 1 boinc boinc     21436 Nov 24 05:05 stderr.txt
[2025-11-24 05:05:48] HITS file was successfully produced:
[2025-11-24 05:05:48] -rw-------. 1 boinc boinc 903479103 Nov 24 05:02 shared/HITS.pool.root.1
[2025-11-24 05:05:48]  *** Contents of shared directory: ***
[2025-11-24 05:05:48] total 1295612
[2025-11-24 05:05:48] -rw-r--r--. 2 boinc boinc 407671387 Nov 23 03:16 ATLAS.root_0
[2025-11-24 05:05:48] -rw-r--r--. 2 boinc boinc     15847 Nov 23 03:16 start_atlas.sh
[2025-11-24 05:05:48] -rw-r--r--. 2 boinc boinc    590100 Nov 23 03:16 input.tar.gz
[2025-11-24 05:05:48] -rw-------. 1 boinc boinc 903479103 Nov 24 05:02 HITS.pool.root.1
[2025-11-24 05:05:48] -rw-------. 1 boinc boinc  14940160 Nov 24 05:05 result.tar.gz
05:05:49 (16989): run_atlas exited; CPU time 334353.457347
05:05:49 (16989): called boinc_finish(0)

</stderr_txt>
]]>

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