Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:12:53 (28207): wrapper (7.7.26015): starting
05:12:53 (28207): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 05:12:53] Arguments: --nthreads 8
[2025-11-20 05:12:53] Threads: 8
[2025-11-20 05:12:53] Checking for CVMFS
[2025-11-20 05:12:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 05:12:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 05:12:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 05:12:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 05:12:53] 2.11.2.0 2873 51624 85008 153076 1 82 16823706 20275201 1 130560 0 12243907 99.844 2782304 32993 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 05:12:53] CVMFS is ok
[2025-11-20 05:12:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 05:12:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 05:12:53] Further information can be found at the LHC@home message board.
[2025-11-20 05:12:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 05:12:53] Checking for apptainer binary...
[2025-11-20 05:12:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 05:12:53] Running /usr/bin/apptainer --version
[2025-11-20 05:12:53] apptainer version 1.3.2-1.el7
[2025-11-20 05:12:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 05:12:55] c-115-13.aglt2.org
[2025-11-20 05:12:55] apptainer works
[2025-11-20 05:12:55] Set ATHENA_PROC_NUMBER=8
[2025-11-20 05:12:55] Set ATHENA_CORE_NUMBER=8
[2025-11-20 05:12:55] Starting ATLAS job with PandaID=6893833023
[2025-11-20 05:12:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 16:28:25]  *** The last 200 lines of the pilot log: ***
[2025-11-20 16:28:25] 2025-11-20 21:27:38,470 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 16:28:25] 2025-11-20 21:27:38,482 | INFO     | fitting pss+swap vs Time
[2025-11-20 16:28:25] 2025-11-20 21:27:38,483 | INFO     | sum of square deviations: 90368925599.15244
[2025-11-20 16:28:25] 2025-11-20 21:27:38,492 | INFO     | sum of deviations: 573034255599.539
[2025-11-20 16:28:25] 2025-11-20 21:27:38,492 | INFO     | mean x: 1763653814.5625942
[2025-11-20 16:28:25] 2025-11-20 21:27:38,492 | INFO     | mean y: 3054122.3846153845
[2025-11-20 16:28:25] 2025-11-20 21:27:38,492 | INFO     | intersect: -11180370313.200819
[2025-11-20 16:28:25] 2025-11-20 21:27:38,493 | INFO     | chi2: 6.284743984683736
[2025-11-20 16:28:25] 2025-11-20 21:27:38,494 | INFO     | sum of square deviations: 88339875735.05759
[2025-11-20 16:28:25] 2025-11-20 21:27:38,502 | INFO     | sum of deviations: 795428812138.763
[2025-11-20 16:28:25] 2025-11-20 21:27:38,503 | INFO     | mean x: 1763653662.0668693
[2025-11-20 16:28:25] 2025-11-20 21:27:38,503 | INFO     | mean y: 3070830.7781155016
[2025-11-20 16:28:25] 2025-11-20 21:27:38,503 | INFO     | intersect: -15877197573.146128
[2025-11-20 16:28:25] 2025-11-20 21:27:38,503 | INFO     | chi2: 3.393968663102944
[2025-11-20 16:28:25] 2025-11-20 21:27:38,504 | INFO     | current chi2=3.393968663102944 (change=45.99670771992891 %)
[2025-11-20 16:28:25] 2025-11-20 21:27:38,504 | INFO     | sum of square deviations: 86341431095.93921
[2025-11-20 16:28:25] 2025-11-20 21:27:38,513 | INFO     | sum of deviations: 913390547021.917
[2025-11-20 16:28:25] 2025-11-20 21:27:38,513 | INFO     | mean x: 1763653509.57121
[2025-11-20 16:28:25] 2025-11-20 21:27:38,513 | INFO     | mean y: 3079829.4211332314
[2025-11-20 16:28:25] 2025-11-20 21:27:38,513 | INFO     | intersect: -18654295006.935207
[2025-11-20 16:28:25] 2025-11-20 21:27:38,514 | INFO     | chi2: 2.5123176225385766
[2025-11-20 16:28:25] 2025-11-20 21:27:38,514 | INFO     | current chi2=2.5123176225385766 (change=25.97699413518792 %)
[2025-11-20 16:28:25] 2025-11-20 21:27:38,515 | INFO     | sum of square deviations: 84373319408.44444
[2025-11-20 16:28:25] 2025-11-20 21:27:38,522 | INFO     | sum of deviations: 931916777537.6665
[2025-11-20 16:28:25] 2025-11-20 21:27:38,523 | INFO     | mean x: 1763653357.074074
[2025-11-20 16:28:25] 2025-11-20 21:27:38,523 | INFO     | mean y: 3081255.111111111
[2025-11-20 16:28:25] 2025-11-20 21:27:38,523 | INFO     | intersect: -19476751525.45699
[2025-11-20 16:28:25] 2025-11-20 21:27:38,524 | INFO     | chi2: 2.399932261405388
[2025-11-20 16:28:25] 2025-11-20 21:27:38,524 | INFO     | current chi2=2.399932261405388 (change=4.473373912794848 %)
[2025-11-20 16:28:25] 2025-11-20 21:27:38,524 | INFO     | right removable region: 647
[2025-11-20 16:28:25] 2025-11-20 21:27:38,524 | INFO     | sum of square deviations: 88339648205.05772
[2025-11-20 16:28:25] 2025-11-20 21:27:38,534 | INFO     | sum of deviations: 377914190955.24963
[2025-11-20 16:28:25] 2025-11-20 21:27:38,534 | INFO     | mean x: 1763653967.0668693
[2025-11-20 16:28:25] 2025-11-20 21:27:38,534 | INFO     | mean y: 3068761.1306990883
[2025-11-20 16:28:25] 2025-11-20 21:27:38,534 | INFO     | intersect: -7541786529.009935
[2025-11-20 16:28:25] 2025-11-20 21:27:38,535 | INFO     | chi2: 4.0341379758696885
[2025-11-20 16:28:25] 2025-11-20 21:27:38,535 | INFO     | current chi2=4.0341379758696885 (change=35.81062354009801 %)
[2025-11-20 16:28:25] 2025-11-20 21:27:38,535 | INFO     | sum of square deviations: 86341016174.0791
[2025-11-20 16:28:25] 2025-11-20 21:27:38,544 | INFO     | sum of deviations: 331386446407.6966
[2025-11-20 16:28:25] 2025-11-20 21:27:38,544 | INFO     | mean x: 1763654119.5696783
[2025-11-20 16:28:25] 2025-11-20 21:27:38,544 | INFO     | mean y: 3072308.9846860645
[2025-11-20 16:28:25] 2025-11-20 21:27:38,544 | INFO     | intersect: -6766028835.228529
[2025-11-20 16:28:25] 2025-11-20 21:27:38,545 | INFO     | chi2: 3.9629088082971404
[2025-11-20 16:28:25] 2025-11-20 21:27:38,545 | INFO     | current chi2=3.9629088082971404 (change=1.7656601732168642 %)
[2025-11-20 16:28:25] 2025-11-20 21:27:38,545 | INFO     | left removable region: 20
[2025-11-20 16:28:25] 2025-11-20 21:27:38,546 | INFO     | sum of square deviations: 76433163512.68251
[2025-11-20 16:28:25] 2025-11-20 21:27:38,553 | INFO     | sum of deviations: 637155995158.6436
[2025-11-20 16:28:25] 2025-11-20 21:27:38,554 | INFO     | mean x: 1763653936.5805423
[2025-11-20 16:28:25] 2025-11-20 21:27:38,554 | INFO     | mean y: 3104261.4625199363
[2025-11-20 16:28:25] 2025-11-20 21:27:38,554 | INFO     | intersect: -14698925949.428543
[2025-11-20 16:28:25] 2025-11-20 21:27:38,555 | INFO     | chi2: 0.04139821455534078
[2025-11-20 16:28:25] 2025-11-20 21:27:38,555 | INFO     | current memory leak: 8.34 B/s (using 627 data points, chi2=0.04)
[2025-11-20 16:28:25] 2025-11-20 21:27:38,555 | INFO     | could have reported an average CPU frequency of 2345 MHz (26 samples)
[2025-11-20 16:28:25] 2025-11-20 21:27:38,555 | INFO     | ..............................
[2025-11-20 16:28:25] 2025-11-20 21:27:38,556 | INFO     | . Timing measurements:
[2025-11-20 16:28:25] 2025-11-20 21:27:38,556 | INFO     | . get job = 0 s
[2025-11-20 16:28:25] 2025-11-20 21:27:38,556 | INFO     | . initial setup = 2 s
[2025-11-20 16:28:25] 2025-11-20 21:27:38,556 | INFO     | . payload setup = 8 s
[2025-11-20 16:28:25] 2025-11-20 21:27:38,556 | INFO     | . stage-in = 0 s
[2025-11-20 16:28:25] 2025-11-20 21:27:38,556 | INFO     | . payload execution = 40423 s
[2025-11-20 16:28:25] 2025-11-20 21:27:38,556 | INFO     | . stage-out = 3 s
[2025-11-20 16:28:25] 2025-11-20 21:27:38,556 | INFO     | . log creation = 0 s
[2025-11-20 16:28:25] 2025-11-20 21:27:38,557 | INFO     | ..............................
[2025-11-20 16:28:25] 2025-11-20 21:27:38,645 | INFO     | 
[2025-11-20 16:28:25] 2025-11-20 21:27:38,645 | INFO     | job summary report
[2025-11-20 16:28:25] 2025-11-20 21:27:38,646 | INFO     | --------------------------------------------------
[2025-11-20 16:28:25] 2025-11-20 21:27:38,646 | INFO     | PanDA job id: 6893833023
[2025-11-20 16:28:25] 2025-11-20 21:27:38,648 | INFO     | task id: 47523449
[2025-11-20 16:28:25] 2025-11-20 21:27:38,648 | INFO     | errors: (none)
[2025-11-20 16:28:25] 2025-11-20 21:27:38,648 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 16:28:25] 2025-11-20 21:27:38,649 | INFO     | pilot state: finished 
[2025-11-20 16:28:25] 2025-11-20 21:27:38,649 | INFO     | transexitcode: 0
[2025-11-20 16:28:25] 2025-11-20 21:27:38,649 | INFO     | exeerrorcode: 0
[2025-11-20 16:28:25] 2025-11-20 21:27:38,649 | INFO     | exeerrordiag: 
[2025-11-20 16:28:25] 2025-11-20 21:27:38,649 | INFO     | exitcode: 0
[2025-11-20 16:28:25] 2025-11-20 21:27:38,650 | INFO     | exitmsg: OK
[2025-11-20 16:28:25] 2025-11-20 21:27:38,650 | INFO     | cpuconsumptiontime: 312222 s
[2025-11-20 16:28:25] 2025-11-20 21:27:38,650 | INFO     | nevents: 1000
[2025-11-20 16:28:25] 2025-11-20 21:27:38,650 | INFO     | neventsw: 0
[2025-11-20 16:28:25] 2025-11-20 21:27:38,650 | INFO     | pid: 6015
[2025-11-20 16:28:25] 2025-11-20 21:27:38,650 | INFO     | pgrp: 6015
[2025-11-20 16:28:25] 2025-11-20 21:27:38,651 | INFO     | corecount: 8
[2025-11-20 16:28:25] 2025-11-20 21:27:38,651 | INFO     | event service: False
[2025-11-20 16:28:25] 2025-11-20 21:27:38,651 | INFO     | sizes: {0: 2297207, 6: 2297469, 11: 2297497, 40436: 2341312, 40440: 2351902, 40442: 2351958, 40450: 2352332}
[2025-11-20 16:28:25] 2025-11-20 21:27:38,651 | INFO     | --------------------------------------------------
[2025-11-20 16:28:25] 2025-11-20 21:27:38,651 | INFO     | 
[2025-11-20 16:28:25] 2025-11-20 21:27:38,652 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-20 16:28:25] 2025-11-20 21:27:38,679 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 16:28:25] 2025-11-20 21:27:38,679 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 16:28:25] 2025-11-20 21:27:38,679 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 16:28:25] 2025-11-20 21:27:38,680 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 16:28:25] 2025-11-20 21:27:38,680 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 16:28:25] 2025-11-20 21:27:38,680 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 16:28:25] 2025-11-20 21:27:38,680 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 16:28:25] 2025-11-20 21:27:38,680 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 16:28:25] 2025-11-20 21:27:38,681 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 16:28:25] 2025-11-20 21:27:38,681 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 16:28:25] 2025-11-20 21:27:38,681 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 16:28:25] 2025-11-20 21:27:38,681 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 16:28:25] 2025-11-20 21:27:38,681 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 16:28:25] 2025-11-20 21:27:38,682 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 16:28:25] 2025-11-20 21:27:38,682 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 16:28:25] 2025-11-20 21:27:38,682 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 16:28:25] 2025-11-20 21:27:38,682 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 16:28:25] 2025-11-20 21:27:38,682 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 16:28:25] 2025-11-20 21:27:38,683 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 16:28:25] 2025-11-20 21:27:38,683 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 16:28:25] 2025-11-20 21:27:38,683 | INFO     | job 6893833023 has completed (purged errors)
[2025-11-20 16:28:25] 2025-11-20 21:27:38,683 | INFO     | overall cleanup function is called
[2025-11-20 16:28:25] 2025-11-20 21:27:39,697 | INFO     | --- collectZombieJob: --- 10, [6015]
[2025-11-20 16:28:25] 2025-11-20 21:27:39,697 | INFO     | zombie collector waiting for pid 6015
[2025-11-20 16:28:25] 2025-11-20 21:27:39,697 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 16:28:25] 2025-11-20 21:27:39,698 | INFO     | collected zombie processes
[2025-11-20 16:28:25] 2025-11-20 21:27:39,698 | INFO     | will attempt to kill all subprocesses of pid=6015
[2025-11-20 16:28:25] 2025-11-20 21:27:39,782 | INFO     | process IDs to be killed: [6015] (in reverse order)
[2025-11-20 16:28:25] 2025-11-20 21:27:39,838 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 16:28:25] 2025-11-20 21:27:39,838 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 16:28:25] 2025-11-20 21:27:39,843 | INFO     | did not find any defunct processes belonging to 6015
[2025-11-20 16:28:25] 2025-11-20 21:27:39,845 | INFO     | did not find any defunct processes belonging to 6015
[2025-11-20 16:28:25] 2025-11-20 21:27:39,848 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 16:28:25] 2025-11-20 21:27:39,848 | INFO     | ready for new job
[2025-11-20 16:28:25] 2025-11-20 21:27:39,848 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 16:28:25] 2025-11-20 21:27:39,852 | INFO     | ***************************************
[2025-11-20 16:28:25] 2025-11-20 21:27:39,852 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 16:28:25] 2025-11-20 21:27:39,852 | INFO     | ***************************************
[2025-11-20 16:28:25] 2025-11-20 21:27:39,852 | INFO     | 
[2025-11-20 16:28:25] 2025-11-20 21:27:39,852 | INFO     | architecture information:
[2025-11-20 16:28:25] 2025-11-20 21:27:39,853 | INFO     | executing command: cat /etc/os-release
[2025-11-20 16:28:25] 2025-11-20 21:27:39,871 | INFO     | cat /etc/os-release:
[2025-11-20 16:28:25] NAME="CentOS Linux"
[2025-11-20 16:28:25] VERSION="7 (Core)"
[2025-11-20 16:28:25] ID="centos"
[2025-11-20 16:28:25] ID_LIKE="rhel fedora"
[2025-11-20 16:28:25] VERSION_ID="7"
[2025-11-20 16:28:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 16:28:25] ANSI_COLOR="0;31"
[2025-11-20 16:28:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 16:28:25] HOME_URL="https://www.centos.org/"
[2025-11-20 16:28:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 16:28:25] 
[2025-11-20 16:28:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 16:28:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 16:28:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 16:28:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 16:28:25] 
[2025-11-20 16:28:25] 2025-11-20 21:27:39,871 | INFO     | ***************************************
[2025-11-20 16:28:25] 2025-11-20 21:27:40,374 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-20 16:28:25] 2025-11-20 21:27:40,393 | INFO     | sufficient remaining disk space (17486053376 B)
[2025-11-20 16:28:25] 2025-11-20 21:27:40,393 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 16:28:25] 2025-11-20 21:27:40,394 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 16:28:25] 2025-11-20 21:27:40,394 | INFO     | update_server=False
[2025-11-20 16:28:25] 2025-11-20 21:27:40,394 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 16:28:25] 2025-11-20 21:27:40,394 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 16:28:25] 2025-11-20 21:27:40,599 | INFO     | all data control threads have been joined
[2025-11-20 16:28:25] 2025-11-20 21:27:40,832 | INFO     | all job control threads have been joined
[2025-11-20 16:28:25] 2025-11-20 21:27:41,388 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 16:28:25] 2025-11-20 21:27:41,389 | INFO     | aborting loop
[2025-11-20 16:28:25] 2025-11-20 21:27:41,395 | INFO     | [job] retrieve thread has finished
[2025-11-20 16:28:25] 2025-11-20 21:27:41,398 | INFO     | [job] queue monitor thread has finished
[2025-11-20 16:28:25] 2025-11-20 21:27:41,561 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 16:28:25] 2025-11-20 21:27:41,601 | INFO     | [job] validate thread has finished
[2025-11-20 16:28:25] 2025-11-20 21:27:41,605 | INFO     | [data] control thread has finished
[2025-11-20 16:28:25] 2025-11-20 21:27:41,793 | INFO     | all payload control threads have been joined
[2025-11-20 16:28:25] 2025-11-20 21:27:41,838 | INFO     | [job] control thread has finished
[2025-11-20 16:28:25] 2025-11-20 21:27:41,841 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 16:28:25] 2025-11-20 21:27:41,978 | INFO     | [payload] validate_post thread has finished
[2025-11-20 16:28:25] 2025-11-20 21:27:42,385 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 16:28:25] 2025-11-20 21:27:42,394 | INFO     | [job] job monitor thread has finished
[2025-11-20 16:28:25] 2025-11-20 21:27:42,432 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 16:28:25] 2025-11-20 21:27:42,494 | INFO     | [payload] failed_post thread has finished
[2025-11-20 16:28:25] 2025-11-20 21:27:42,514 | INFO     | [data] copytool_in thread has finished
[2025-11-20 16:28:25] 2025-11-20 21:27:42,520 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 16:28:25] 2025-11-20 21:27:42,798 | INFO     | [payload] control thread has finished
[2025-11-20 16:28:25] 2025-11-20 21:27:43,567 | INFO     | [data] copytool_out thread has finished
[2025-11-20 16:28:25] 2025-11-20 21:27:45,847 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 16:28:25] 2025-11-20 21:27:51,077 | INFO     | job.realtimelogging is not enabled
[2025-11-20 16:28:25] 2025-11-20 21:27:52,082 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 16:28:25] 2025-11-20 21:28:11,370 | INFO     | PID=31944 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-20 16:28:25] 2025-11-20 21:28:11,370 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 16:28:25] 2025-11-20 21:28:11,370 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 16:28:25] 2025-11-20 21:28:11,370 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 16:28:25] 2025-11-20 21:28:16,186 [wrapper] supervise_pilot (15 min periods counter: 46)
[2025-11-20 16:28:25] 2025-11-20 21:28:18,917 | INFO     | [monitor] cgroup control has ended
[2025-11-20 16:28:25] 2025-11-20 21:28:20,576 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140187405113152)>', '<ExcThread(monitor, started 140186516186880)>']
[2025-11-20 16:28:25] 2025-11-20 21:28:21,413 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 16:28:25] 2025-11-20 21:28:21,414 | INFO     | [monitor] control thread has ended
[2025-11-20 16:28:25] 2025-11-20 21:28:25,596 | INFO     | all workflow threads have been joined
[2025-11-20 16:28:25] 2025-11-20 21:28:25,597 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 16:28:25] 2025-11-20 21:28:25,599 | INFO     | traces error code: 0
[2025-11-20 16:28:25] 2025-11-20 21:28:25,601 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 16:28:25] 2025-11-20 21:28:25,726 [wrapper] ==== pilot stdout END ====
[2025-11-20 16:28:25] 2025-11-20 21:28:25,731 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 16:28:25] 2025-11-20 21:28:25,736 [wrapper] pilotpid: 31944
[2025-11-20 16:28:25] 2025-11-20 21:28:25,740 [wrapper] Pilot exit status: 0
[2025-11-20 16:28:25] 2025-11-20 21:28:25,757 [wrapper] pandaids: 6893833023
[2025-11-20 16:28:25] 2025-11-20 21:28:25,807 [wrapper] cleanup supervisor_pilot  1558 31945
[2025-11-20 16:28:25] 2025-11-20 21:28:25,811 [wrapper] Test setup, not cleaning
[2025-11-20 16:28:25] 2025-11-20 21:28:25,816 [wrapper] apfmon messages muted
[2025-11-20 16:28:25] 2025-11-20 21:28:25,820 [wrapper] ==== wrapper stdout END ====
[2025-11-20 16:28:25] 2025-11-20 21:28:25,825 [wrapper] ==== wrapper stderr END ====
[2025-11-20 16:28:25]  *** Error codes and diagnostics ***
[2025-11-20 16:28:25]     "exeErrorCode": 0,
[2025-11-20 16:28:25]     "exeErrorDiag": "",
[2025-11-20 16:28:25]     "pilotErrorCode": 0,
[2025-11-20 16:28:25]     "pilotErrorDiag": "",
[2025-11-20 16:28:25]  *** Listing of results directory ***
[2025-11-20 16:28:25] total 1301172
[2025-11-20 16:28:25] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 05:06 pilot3.tar.gz
[2025-11-20 16:28:25] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 05:11 queuedata.json
[2025-11-20 16:28:25] -rwx------ 1 boincer umatlas     36292 Nov 20 05:11 runpilot2-wrapper.sh
[2025-11-20 16:28:25] -rw-r--r-- 1 boincer umatlas       100 Nov 20 05:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 16:28:25] -rwxr-xr-x 1 boincer umatlas      7986 Nov 20 05:12 run_atlas
[2025-11-20 16:28:25] -rw-r--r-- 1 boincer umatlas       105 Nov 20 05:12 job.xml
[2025-11-20 16:28:25] -rw-r--r-- 2 boincer umatlas 409584985 Nov 20 05:12 EVNT.47493127._000028.pool.root.1
[2025-11-20 16:28:25] -rw-r--r-- 2 boincer umatlas     15847 Nov 20 05:12 start_atlas.sh
[2025-11-20 16:28:25] drwxrwx--x 2 boincer umatlas      4096 Nov 20 05:12 shared
[2025-11-20 16:28:25] -rw-r--r-- 2 boincer umatlas    590098 Nov 20 05:12 input.tar.gz
[2025-11-20 16:28:25] -rw-r--r-- 1 boincer umatlas         0 Nov 20 05:12 boinc_lockfile
[2025-11-20 16:28:25] -rw-r--r-- 1 boincer umatlas      2784 Nov 20 05:12 pandaJob.out
[2025-11-20 16:28:25] -rw------- 1 boincer umatlas        57 Nov 20 05:12 setup.sh.local
[2025-11-20 16:28:25] -rw------- 1 boincer umatlas    989435 Nov 20 05:13 agis_schedconf.cvmfs.json
[2025-11-20 16:28:25] drwx------ 5 boincer umatlas      4096 Nov 20 05:13 pilot3
[2025-11-20 16:28:25] -rw-r--r-- 1 boincer umatlas       532 Nov 20 16:14 boinc_task_state.xml
[2025-11-20 16:28:25] -rw------- 1 boincer umatlas 903862994 Nov 20 16:26 HITS.47523449._000272.pool.root.1
[2025-11-20 16:28:25] -rw------- 1 boincer umatlas      1060 Nov 20 16:27 memory_monitor_summary.json
[2025-11-20 16:28:25] -rw------- 1 boincer umatlas        95 Nov 20 16:27 pilot_heartbeat.json
[2025-11-20 16:28:25] -rw------- 1 boincer umatlas   1526164 Nov 20 16:27 agis_ddmendpoints.agis.ALL.json
[2025-11-20 16:28:25] -rw------- 1 boincer umatlas   1924298 Nov 20 16:27 log.47523449._000272.job.log.tgz.1
[2025-11-20 16:28:25] -rw------- 1 boincer umatlas      8657 Nov 20 16:27 heartbeat.json
[2025-11-20 16:28:25] -rw-r--r-- 1 boincer umatlas      5912 Nov 20 16:27 init_data.xml
[2025-11-20 16:28:25] -rw-r--r-- 1 boincer umatlas        29 Nov 20 16:28 wrapper_checkpoint.txt
[2025-11-20 16:28:25] -rw-r--r-- 1 boincer umatlas      8192 Nov 20 16:28 boinc_mmap_file
[2025-11-20 16:28:25] -rw------- 1 boincer umatlas      4818 Nov 20 16:28 pilotlog.txt
[2025-11-20 16:28:25] -rw------- 1 boincer umatlas   5589690 Nov 20 16:28 log.47523449._000272.job.log.1
[2025-11-20 16:28:25] -rw------- 1 boincer umatlas       353 Nov 20 16:28 output.list
[2025-11-20 16:28:25] -rw-r--r-- 1 boincer umatlas       620 Nov 20 16:28 runtime_log
[2025-11-20 16:28:25] -rw------- 1 boincer umatlas   7536640 Nov 20 16:28 result.tar.gz
[2025-11-20 16:28:25] -rw------- 1 boincer umatlas       668 Nov 20 16:28 z1RMDmeoGg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZ9GKDmztuvrn.diag
[2025-11-20 16:28:25] -rw-r--r-- 1 boincer umatlas      9343 Nov 20 16:28 runtime_log.err
[2025-11-20 16:28:25] -rw-r--r-- 1 boincer umatlas     21058 Nov 20 16:28 stderr.txt
[2025-11-20 16:28:26] HITS file was successfully produced:
[2025-11-20 16:28:26] -rw------- 1 boincer umatlas 903862994 Nov 20 16:26 shared/HITS.pool.root.1
[2025-11-20 16:28:26]  *** Contents of shared directory: ***
[2025-11-20 16:28:26] total 1290628
[2025-11-20 16:28:26] -rw-r--r-- 2 boincer umatlas 409584985 Nov 20 05:12 ATLAS.root_0
[2025-11-20 16:28:26] -rw-r--r-- 2 boincer umatlas     15847 Nov 20 05:12 start_atlas.sh
[2025-11-20 16:28:26] -rw-r--r-- 2 boincer umatlas    590098 Nov 20 05:12 input.tar.gz
[2025-11-20 16:28:26] -rw------- 1 boincer umatlas 903862994 Nov 20 16:26 HITS.pool.root.1
[2025-11-20 16:28:26] -rw------- 1 boincer umatlas   7536640 Nov 20 16:28 result.tar.gz
16:28:27 (28207): run_atlas exited; CPU time 309385.531980
16:28:27 (28207): called boinc_finish(0)

</stderr_txt>
]]>

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