Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:13:08 (5747): wrapper (7.7.26015): starting
05:13:08 (5747): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 05:13:08] Arguments: --nthreads 8
[2025-11-20 05:13:08] Threads: 8
[2025-11-20 05:13:08] Checking for CVMFS
[2025-11-20 05:13:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 05:13:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 05:13:08] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 05:13:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 05:13:09] 2.11.2.0 2877 50263 88236 153076 0 1 16447167 20275201 1 130560 0 11021236 99.871 2402759 31017 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 05:13:09] CVMFS is ok
[2025-11-20 05:13:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 05:13:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 05:13:09] Further information can be found at the LHC@home message board.
[2025-11-20 05:13:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 05:13:09] Checking for apptainer binary...
[2025-11-20 05:13:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 05:13:09] Running /usr/bin/apptainer --version
[2025-11-20 05:13:09] apptainer version 1.3.2-1.el7
[2025-11-20 05:13:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 05:13:11] c-204-32.aglt2.org
[2025-11-20 05:13:11] apptainer works
[2025-11-20 05:13:11] Set ATHENA_PROC_NUMBER=8
[2025-11-20 05:13:11] Set ATHENA_CORE_NUMBER=8
[2025-11-20 05:13:11] Starting ATLAS job with PandaID=6893831447
[2025-11-20 05:13:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 17:36:01]  *** The last 200 lines of the pilot log: ***
[2025-11-20 17:36:01] 2025-11-20 22:35:25,834 | INFO     | time since job start (44516s) is within the limit (172800.0s)
[2025-11-20 17:36:01] 2025-11-20 22:35:27,153 | INFO     | monitor loop #3270: job 0:6893831447 is in state 'finished'
[2025-11-20 17:36:01] 2025-11-20 22:35:27,154 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 17:36:01] 2025-11-20 22:35:27,840 | INFO     | time since job start (44518s) is within the limit (172800.0s)
[2025-11-20 17:36:01] 2025-11-20 22:35:28,451 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-20 17:36:01] 2025-11-20 22:35:28,456 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-11-20 17:36:01] 2025-11-20 22:35:28,459 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893831447/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 17:36:01] 2025-11-20 22:35:28,460 | INFO     | extracted standard info from prmon json
[2025-11-20 17:36:01] 2025-11-20 22:35:28,461 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 17:36:01] 2025-11-20 22:35:28,461 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 17:36:01] 2025-11-20 22:35:28,476 | INFO     | fitting pss+swap vs Time
[2025-11-20 17:36:01] 2025-11-20 22:35:28,477 | INFO     | sum of square deviations: 120627433659.34775
[2025-11-20 17:36:01] 2025-11-20 22:35:28,488 | INFO     | sum of deviations: 717402462444.3901
[2025-11-20 17:36:01] 2025-11-20 22:35:28,488 | INFO     | mean x: 1763655877.060274
[2025-11-20 17:36:01] 2025-11-20 22:35:28,488 | INFO     | mean y: 3100102.8547945204
[2025-11-20 17:36:01] 2025-11-20 22:35:28,488 | INFO     | intersect: -10485816312.963467
[2025-11-20 17:36:01] 2025-11-20 22:35:28,489 | INFO     | chi2: 6.271741847815727
[2025-11-20 17:36:01] 2025-11-20 22:35:28,490 | INFO     | sum of square deviations: 118165847130.2677
[2025-11-20 17:36:01] 2025-11-20 22:35:28,501 | INFO     | sum of deviations: 1011676363421.4076
[2025-11-20 17:36:01] 2025-11-20 22:35:28,502 | INFO     | mean x: 1763655724.564138
[2025-11-20 17:36:01] 2025-11-20 22:35:28,502 | INFO     | mean y: 3118336.023448276
[2025-11-20 17:36:01] 2025-11-20 22:35:28,502 | INFO     | intersect: -15096412138.187206
[2025-11-20 17:36:01] 2025-11-20 22:35:28,503 | INFO     | chi2: 2.462142570713155
[2025-11-20 17:36:01] 2025-11-20 22:35:28,503 | INFO     | current chi2=2.462142570713155 (change=60.74228451270438 %)
[2025-11-20 17:36:01] 2025-11-20 22:35:28,504 | INFO     | sum of square deviations: 115737938060.8004
[2025-11-20 17:36:01] 2025-11-20 22:35:28,515 | INFO     | sum of deviations: 1029621713158.7338
[2025-11-20 17:36:01] 2025-11-20 22:35:28,515 | INFO     | mean x: 1763655572.0666666
[2025-11-20 17:36:01] 2025-11-20 22:35:28,515 | INFO     | mean y: 3119454.5055555557
[2025-11-20 17:36:01] 2025-11-20 22:35:28,515 | INFO     | intersect: -15686619813.004856
[2025-11-20 17:36:01] 2025-11-20 22:35:28,516 | INFO     | chi2: 2.342686098310478
[2025-11-20 17:36:01] 2025-11-20 22:35:28,516 | INFO     | current chi2=2.342686098310478 (change=4.851728483297238 %)
[2025-11-20 17:36:01] 2025-11-20 22:35:28,516 | INFO     | right removable region: 719
[2025-11-20 17:36:01] 2025-11-20 22:35:28,517 | INFO     | sum of square deviations: 118165597640.26755
[2025-11-20 17:36:01] 2025-11-20 22:35:28,528 | INFO     | sum of deviations: 503897541352.02203
[2025-11-20 17:36:01] 2025-11-20 22:35:28,528 | INFO     | mean x: 1763656029.564138
[2025-11-20 17:36:01] 2025-11-20 22:35:28,529 | INFO     | mean y: 3113307.139310345
[2025-11-20 17:36:01] 2025-11-20 22:35:28,529 | INFO     | intersect: -7517704552.162858
[2025-11-20 17:36:01] 2025-11-20 22:35:28,529 | INFO     | chi2: 4.073253030317742
[2025-11-20 17:36:01] 2025-11-20 22:35:28,530 | INFO     | current chi2=4.073253030317742 (change=35.05387930250441 %)
[2025-11-20 17:36:01] 2025-11-20 22:35:28,530 | INFO     | sum of square deviations: 115737483183.6653
[2025-11-20 17:36:01] 2025-11-20 22:35:28,541 | INFO     | sum of deviations: 460469259305.43744
[2025-11-20 17:36:01] 2025-11-20 22:35:28,541 | INFO     | mean x: 1763656182.0680556
[2025-11-20 17:36:01] 2025-11-20 22:35:28,542 | INFO     | mean y: 3116033.5625
[2025-11-20 17:36:01] 2025-11-20 22:35:28,542 | INFO     | intersect: -7013707155.322525
[2025-11-20 17:36:01] 2025-11-20 22:35:28,543 | INFO     | chi2: 4.032396989860619
[2025-11-20 17:36:01] 2025-11-20 22:35:28,543 | INFO     | current chi2=4.032396989860619 (change=1.0030322239504132 %)
[2025-11-20 17:36:01] 2025-11-20 22:35:28,543 | INFO     | left removable region: 20
[2025-11-20 17:36:01] 2025-11-20 22:35:28,544 | INFO     | sum of square deviations: 105903072632.49988
[2025-11-20 17:36:01] 2025-11-20 22:35:28,554 | INFO     | sum of deviations: 717820051939.8364
[2025-11-20 17:36:01] 2025-11-20 22:35:28,555 | INFO     | mean x: 1763656151.5779686
[2025-11-20 17:36:01] 2025-11-20 22:35:28,555 | INFO     | mean y: 3139142.067238913
[2025-11-20 17:36:01] 2025-11-20 22:35:28,555 | INFO     | intersect: -11951072561.712912
[2025-11-20 17:36:01] 2025-11-20 22:35:28,556 | INFO     | chi2: 0.05623985869965988
[2025-11-20 17:36:01] 2025-11-20 22:35:28,556 | INFO     | current memory leak: 6.78 B/s (using 699 data points, chi2=0.06)
[2025-11-20 17:36:01] 2025-11-20 22:35:28,556 | INFO     | could have reported an average CPU frequency of 2167 MHz (28 samples)
[2025-11-20 17:36:01] 2025-11-20 22:35:28,557 | INFO     | ..............................
[2025-11-20 17:36:01] 2025-11-20 22:35:28,557 | INFO     | . Timing measurements:
[2025-11-20 17:36:01] 2025-11-20 22:35:28,557 | INFO     | . get job = 0 s
[2025-11-20 17:36:01] 2025-11-20 22:35:28,557 | INFO     | . initial setup = 2 s
[2025-11-20 17:36:01] 2025-11-20 22:35:28,557 | INFO     | . payload setup = 9 s
[2025-11-20 17:36:01] 2025-11-20 22:35:28,557 | INFO     | . stage-in = 0 s
[2025-11-20 17:36:01] 2025-11-20 22:35:28,557 | INFO     | . payload execution = 44475 s
[2025-11-20 17:36:01] 2025-11-20 22:35:28,558 | INFO     | . stage-out = 3 s
[2025-11-20 17:36:01] 2025-11-20 22:35:28,558 | INFO     | . log creation = 0 s
[2025-11-20 17:36:01] 2025-11-20 22:35:28,558 | INFO     | ..............................
[2025-11-20 17:36:01] 2025-11-20 22:35:28,664 | INFO     | 
[2025-11-20 17:36:01] 2025-11-20 22:35:28,664 | INFO     | job summary report
[2025-11-20 17:36:01] 2025-11-20 22:35:28,664 | INFO     | --------------------------------------------------
[2025-11-20 17:36:01] 2025-11-20 22:35:28,664 | INFO     | PanDA job id: 6893831447
[2025-11-20 17:36:01] 2025-11-20 22:35:28,665 | INFO     | task id: 47523449
[2025-11-20 17:36:01] 2025-11-20 22:35:28,665 | INFO     | errors: (none)
[2025-11-20 17:36:01] 2025-11-20 22:35:28,665 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 17:36:01] 2025-11-20 22:35:28,665 | INFO     | pilot state: finished 
[2025-11-20 17:36:01] 2025-11-20 22:35:28,665 | INFO     | transexitcode: 0
[2025-11-20 17:36:01] 2025-11-20 22:35:28,665 | INFO     | exeerrorcode: 0
[2025-11-20 17:36:01] 2025-11-20 22:35:28,665 | INFO     | exeerrordiag: 
[2025-11-20 17:36:01] 2025-11-20 22:35:28,665 | INFO     | exitcode: 0
[2025-11-20 17:36:01] 2025-11-20 22:35:28,665 | INFO     | exitmsg: OK
[2025-11-20 17:36:01] 2025-11-20 22:35:28,666 | INFO     | cpuconsumptiontime: 346505 s
[2025-11-20 17:36:01] 2025-11-20 22:35:28,666 | INFO     | nevents: 1000
[2025-11-20 17:36:01] 2025-11-20 22:35:28,666 | INFO     | neventsw: 0
[2025-11-20 17:36:01] 2025-11-20 22:35:28,666 | INFO     | pid: 15915
[2025-11-20 17:36:01] 2025-11-20 22:35:28,666 | INFO     | pgrp: 15915
[2025-11-20 17:36:01] 2025-11-20 22:35:28,666 | INFO     | corecount: 8
[2025-11-20 17:36:01] 2025-11-20 22:35:28,667 | INFO     | event service: False
[2025-11-20 17:36:01] 2025-11-20 22:35:28,667 | INFO     | sizes: {0: 2297036, 1: 2297235, 7: 2297497, 11: 2297525, 44489: 2343253, 44493: 2353843, 44496: 2354027, 44502: 2354273}
[2025-11-20 17:36:01] 2025-11-20 22:35:28,667 | INFO     | --------------------------------------------------
[2025-11-20 17:36:01] 2025-11-20 22:35:28,667 | INFO     | 
[2025-11-20 17:36:01] 2025-11-20 22:35:28,667 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-20 17:36:01] 2025-11-20 22:35:28,697 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 17:36:01] 2025-11-20 22:35:28,698 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 17:36:01] 2025-11-20 22:35:28,698 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 17:36:01] 2025-11-20 22:35:28,698 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 17:36:01] 2025-11-20 22:35:28,698 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 17:36:01] 2025-11-20 22:35:28,698 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 17:36:01] 2025-11-20 22:35:28,699 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 17:36:01] 2025-11-20 22:35:28,699 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 17:36:01] 2025-11-20 22:35:28,699 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 17:36:01] 2025-11-20 22:35:28,699 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 17:36:01] 2025-11-20 22:35:28,699 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 17:36:01] 2025-11-20 22:35:28,700 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 17:36:01] 2025-11-20 22:35:28,700 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 17:36:01] 2025-11-20 22:35:28,700 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 17:36:01] 2025-11-20 22:35:28,700 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 17:36:01] 2025-11-20 22:35:28,700 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 17:36:01] 2025-11-20 22:35:28,701 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 17:36:01] 2025-11-20 22:35:28,701 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 17:36:01] 2025-11-20 22:35:28,701 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 17:36:01] 2025-11-20 22:35:28,701 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 17:36:01] 2025-11-20 22:35:28,701 | INFO     | job 6893831447 has completed (purged errors)
[2025-11-20 17:36:01] 2025-11-20 22:35:28,702 | INFO     | overall cleanup function is called
[2025-11-20 17:36:01] 2025-11-20 22:35:29,717 | INFO     | --- collectZombieJob: --- 10, [15915]
[2025-11-20 17:36:01] 2025-11-20 22:35:29,717 | INFO     | zombie collector waiting for pid 15915
[2025-11-20 17:36:01] 2025-11-20 22:35:29,718 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 17:36:01] 2025-11-20 22:35:29,718 | INFO     | collected zombie processes
[2025-11-20 17:36:01] 2025-11-20 22:35:29,718 | INFO     | will attempt to kill all subprocesses of pid=15915
[2025-11-20 17:36:01] 2025-11-20 22:35:29,811 | INFO     | process IDs to be killed: [15915] (in reverse order)
[2025-11-20 17:36:01] 2025-11-20 22:35:29,869 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 17:36:01] 2025-11-20 22:35:29,869 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 17:36:01] 2025-11-20 22:35:29,874 | INFO     | did not find any defunct processes belonging to 15915
[2025-11-20 17:36:01] 2025-11-20 22:35:29,877 | INFO     | did not find any defunct processes belonging to 15915
[2025-11-20 17:36:01] 2025-11-20 22:35:29,880 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 17:36:01] 2025-11-20 22:35:29,880 | INFO     | ready for new job
[2025-11-20 17:36:01] 2025-11-20 22:35:29,881 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 17:36:01] 2025-11-20 22:35:29,885 | INFO     | ***************************************
[2025-11-20 17:36:01] 2025-11-20 22:35:29,885 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 17:36:01] 2025-11-20 22:35:29,885 | INFO     | ***************************************
[2025-11-20 17:36:01] 2025-11-20 22:35:29,885 | INFO     | 
[2025-11-20 17:36:01] 2025-11-20 22:35:29,886 | INFO     | architecture information:
[2025-11-20 17:36:01] 2025-11-20 22:35:29,887 | INFO     | executing command: cat /etc/os-release
[2025-11-20 17:36:01] 2025-11-20 22:35:29,905 | INFO     | cat /etc/os-release:
[2025-11-20 17:36:01] NAME="CentOS Linux"
[2025-11-20 17:36:01] VERSION="7 (Core)"
[2025-11-20 17:36:01] ID="centos"
[2025-11-20 17:36:01] ID_LIKE="rhel fedora"
[2025-11-20 17:36:01] VERSION_ID="7"
[2025-11-20 17:36:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 17:36:01] ANSI_COLOR="0;31"
[2025-11-20 17:36:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 17:36:01] HOME_URL="https://www.centos.org/"
[2025-11-20 17:36:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 17:36:01] 
[2025-11-20 17:36:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 17:36:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 17:36:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 17:36:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 17:36:01] 
[2025-11-20 17:36:01] 2025-11-20 22:35:29,906 | INFO     | ***************************************
[2025-11-20 17:36:01] 2025-11-20 22:35:30,408 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-20 17:36:01] 2025-11-20 22:35:30,429 | INFO     | sufficient remaining disk space (17429430272 B)
[2025-11-20 17:36:01] 2025-11-20 22:35:30,429 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 17:36:01] 2025-11-20 22:35:30,429 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 17:36:01] 2025-11-20 22:35:30,429 | INFO     | update_server=False
[2025-11-20 17:36:01] 2025-11-20 22:35:30,430 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 17:36:01] 2025-11-20 22:35:30,430 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 17:36:01] 2025-11-20 22:35:30,431 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 17:36:01] 2025-11-20 22:35:30,662 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 17:36:01] 2025-11-20 22:35:30,663 | INFO     | aborting loop
[2025-11-20 17:36:01] 2025-11-20 22:35:30,951 | INFO     | all data control threads have been joined
[2025-11-20 17:36:01] 2025-11-20 22:35:31,072 | INFO     | all job control threads have been joined
[2025-11-20 17:36:01] 2025-11-20 22:35:31,266 | INFO     | all payload control threads have been joined
[2025-11-20 17:36:01] 2025-11-20 22:35:31,431 | INFO     | [job] queue monitor thread has finished
[2025-11-20 17:36:01] 2025-11-20 22:35:31,435 | INFO     | [job] retrieve thread has finished
[2025-11-20 17:36:01] 2025-11-20 22:35:31,504 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 17:36:01] 2025-11-20 22:35:31,659 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 17:36:01] 2025-11-20 22:35:31,668 | INFO     | [job] job monitor thread has finished
[2025-11-20 17:36:01] 2025-11-20 22:35:31,924 | INFO     | [payload] failed_post thread has finished
[2025-11-20 17:36:01] 2025-11-20 22:35:31,957 | INFO     | [data] control thread has finished
[2025-11-20 17:36:01] 2025-11-20 22:35:32,078 | INFO     | [job] control thread has finished
[2025-11-20 17:36:01] 2025-11-20 22:35:32,257 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 17:36:01] 2025-11-20 22:35:32,270 | INFO     | [data] copytool_in thread has finished
[2025-11-20 17:36:01] 2025-11-20 22:35:32,272 | INFO     | [payload] control thread has finished
[2025-11-20 17:36:01] 2025-11-20 22:35:32,302 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 17:36:01] 2025-11-20 22:35:32,437 | INFO     | [data] copytool_out thread has finished
[2025-11-20 17:36:01] 2025-11-20 22:35:32,704 | INFO     | [job] validate thread has finished
[2025-11-20 17:36:01] 2025-11-20 22:35:32,793 | INFO     | [payload] validate_post thread has finished
[2025-11-20 17:36:01] 2025-11-20 22:35:33,045 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 17:36:01] 2025-11-20 22:35:37,051 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 17:36:01] 2025-11-20 22:35:43,385 | INFO     | [monitor] cgroup control has ended
[2025-11-20 17:36:01] 2025-11-20 22:35:43,917 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140708180621120)>', '<ExcThread(monitor, started 140707725555456)>']
[2025-11-20 17:36:01] 2025-11-20 22:35:48,943 | INFO     | all workflow threads have been joined
[2025-11-20 17:36:01] 2025-11-20 22:35:48,943 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 17:36:01] 2025-11-20 22:35:48,944 | INFO     | traces error code: 0
[2025-11-20 17:36:01] 2025-11-20 22:35:48,944 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 17:36:01] 2025-11-20 22:36:01,048 | INFO     | PID=9435 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-20 17:36:01] 2025-11-20 22:36:01,049 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 17:36:01] 2025-11-20 22:36:01,049 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 17:36:01] 2025-11-20 22:36:01,049 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 17:36:01] 2025-11-20 22:36:01,049 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 17:36:01] 2025-11-20 22:36:01,049 | INFO     | [monitor] control thread has ended
[2025-11-20 17:36:01] 2025-11-20 22:36:01,163 [wrapper] ==== pilot stdout END ====
[2025-11-20 17:36:01] 2025-11-20 22:36:01,169 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 17:36:01] 2025-11-20 22:36:01,174 [wrapper] pilotpid: 9435
[2025-11-20 17:36:01] 2025-11-20 22:36:01,178 [wrapper] Pilot exit status: 0
[2025-11-20 17:36:01] 2025-11-20 22:36:01,196 [wrapper] pandaids: 6893831447
[2025-11-20 17:36:01] 2025-11-20 22:36:01,247 [wrapper] cleanup supervisor_pilot   604 9436
[2025-11-20 17:36:01] 2025-11-20 22:36:01,252 [wrapper] Test setup, not cleaning
[2025-11-20 17:36:01] 2025-11-20 22:36:01,257 [wrapper] apfmon messages muted
[2025-11-20 17:36:01] 2025-11-20 22:36:01,261 [wrapper] ==== wrapper stdout END ====
[2025-11-20 17:36:01] 2025-11-20 22:36:01,267 [wrapper] ==== wrapper stderr END ====
[2025-11-20 17:36:01]  *** Error codes and diagnostics ***
[2025-11-20 17:36:01]     "exeErrorCode": 0,
[2025-11-20 17:36:01]     "exeErrorDiag": "",
[2025-11-20 17:36:01]     "pilotErrorCode": 0,
[2025-11-20 17:36:01]     "pilotErrorDiag": "",
[2025-11-20 17:36:01]  *** Listing of results directory ***
[2025-11-20 17:36:01] total 1316240
[2025-11-20 17:36:01] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 05:06 pilot3.tar.gz
[2025-11-20 17:36:01] -rwx------ 1 boincer umatlas     36292 Nov 20 05:10 runpilot2-wrapper.sh
[2025-11-20 17:36:01] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 05:11 queuedata.json
[2025-11-20 17:36:01] -rw-r--r-- 1 boincer umatlas       100 Nov 20 05:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 17:36:01] -rwxr-xr-x 1 boincer umatlas      7986 Nov 20 05:13 run_atlas
[2025-11-20 17:36:01] -rw-r--r-- 1 boincer umatlas       105 Nov 20 05:13 job.xml
[2025-11-20 17:36:01] -rw-r--r-- 2 boincer umatlas 410071561 Nov 20 05:13 EVNT.47493127._000017.pool.root.1
[2025-11-20 17:36:01] -rw-r--r-- 2 boincer umatlas     15847 Nov 20 05:13 start_atlas.sh
[2025-11-20 17:36:01] drwxrwx--x 2 boincer umatlas      4096 Nov 20 05:13 shared
[2025-11-20 17:36:01] -rw-r--r-- 2 boincer umatlas    590098 Nov 20 05:13 input.tar.gz
[2025-11-20 17:36:01] -rw-r--r-- 1 boincer umatlas         0 Nov 20 05:13 boinc_lockfile
[2025-11-20 17:36:01] -rw-r--r-- 1 boincer umatlas      2784 Nov 20 05:13 pandaJob.out
[2025-11-20 17:36:01] -rw------- 1 boincer umatlas        57 Nov 20 05:13 setup.sh.local
[2025-11-20 17:36:01] -rw------- 1 boincer umatlas    989435 Nov 20 05:13 agis_schedconf.cvmfs.json
[2025-11-20 17:36:01] drwx------ 5 boincer umatlas      4096 Nov 20 05:13 pilot3
[2025-11-20 17:36:01] -rw-r--r-- 1 boincer umatlas      5912 Nov 20 17:27 init_data.xml
[2025-11-20 17:36:01] -rw-r--r-- 1 boincer umatlas       532 Nov 20 17:27 boinc_task_state.xml
[2025-11-20 17:36:01] -rw------- 1 boincer umatlas 917628323 Nov 20 17:34 HITS.47523449._000169.pool.root.1
[2025-11-20 17:36:01] -rw------- 1 boincer umatlas      1062 Nov 20 17:35 memory_monitor_summary.json
[2025-11-20 17:36:01] -rw------- 1 boincer umatlas   1526164 Nov 20 17:35 agis_ddmendpoints.agis.ALL.json
[2025-11-20 17:36:01] -rw------- 1 boincer umatlas   1980437 Nov 20 17:35 log.47523449._000169.job.log.tgz.1
[2025-11-20 17:36:01] -rw------- 1 boincer umatlas      8657 Nov 20 17:35 heartbeat.json
[2025-11-20 17:36:01] -rw-r--r-- 1 boincer umatlas      8192 Nov 20 17:35 boinc_mmap_file
[2025-11-20 17:36:01] -rw-r--r-- 1 boincer umatlas        29 Nov 20 17:36 wrapper_checkpoint.txt
[2025-11-20 17:36:01] -rw------- 1 boincer umatlas        95 Nov 20 17:36 pilot_heartbeat.json
[2025-11-20 17:36:01] -rw------- 1 boincer umatlas       744 Nov 20 17:36 pilotlog.txt
[2025-11-20 17:36:01] -rw------- 1 boincer umatlas   6121063 Nov 20 17:36 log.47523449._000169.job.log.1
[2025-11-20 17:36:01] -rw------- 1 boincer umatlas       353 Nov 20 17:36 output.list
[2025-11-20 17:36:01] -rw-r--r-- 1 boincer umatlas       620 Nov 20 17:36 runtime_log
[2025-11-20 17:36:01] -rw------- 1 boincer umatlas   8120320 Nov 20 17:36 result.tar.gz
[2025-11-20 17:36:01] -rw-r--r-- 1 boincer umatlas      9343 Nov 20 17:36 runtime_log.err
[2025-11-20 17:36:01] -rw------- 1 boincer umatlas       668 Nov 20 17:36 FIvMDmfnGg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmVDGKDmwcfTtn.diag
[2025-11-20 17:36:01] -rw-r--r-- 1 boincer umatlas     21301 Nov 20 17:36 stderr.txt
[2025-11-20 17:36:01] HITS file was successfully produced:
[2025-11-20 17:36:01] -rw------- 1 boincer umatlas 917628323 Nov 20 17:34 shared/HITS.pool.root.1
[2025-11-20 17:36:01]  *** Contents of shared directory: ***
[2025-11-20 17:36:01] total 1305124
[2025-11-20 17:36:01] -rw-r--r-- 2 boincer umatlas 410071561 Nov 20 05:13 ATLAS.root_0
[2025-11-20 17:36:01] -rw-r--r-- 2 boincer umatlas     15847 Nov 20 05:13 start_atlas.sh
[2025-11-20 17:36:01] -rw-r--r-- 2 boincer umatlas    590098 Nov 20 05:13 input.tar.gz
[2025-11-20 17:36:01] -rw------- 1 boincer umatlas 917628323 Nov 20 17:34 HITS.pool.root.1
[2025-11-20 17:36:01] -rw------- 1 boincer umatlas   8120320 Nov 20 17:36 result.tar.gz
17:36:03 (5747): run_atlas exited; CPU time 344140.529104
17:36:03 (5747): called boinc_finish(0)

</stderr_txt>
]]>

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