Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:12:20 (9457): wrapper (7.7.26015): starting
05:12:20 (9457): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 05:12:20] Arguments: --nthreads 8
[2025-11-20 05:12:20] Threads: 8
[2025-11-20 05:12:20] Checking for CVMFS
[2025-11-20 05:12:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 05:12:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 05:12:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 05:12:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 05:12:21] 2.11.2.0 2860 56938 81052 153076 2 1 17098204 20275200 1 130560 0 13096321 99.804 3667051 32055 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 05:12:21] CVMFS is ok
[2025-11-20 05:12:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 05:12:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 05:12:21] Further information can be found at the LHC@home message board.
[2025-11-20 05:12:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 05:12:21] Checking for apptainer binary...
[2025-11-20 05:12:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 05:12:21] Running /usr/bin/apptainer --version
[2025-11-20 05:12:21] apptainer version 1.3.2-1.el7
[2025-11-20 05:12:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 05:12:23] c-204-9.aglt2.org
[2025-11-20 05:12:23] apptainer works
[2025-11-20 05:12:23] Set ATHENA_PROC_NUMBER=8
[2025-11-20 05:12:23] Set ATHENA_CORE_NUMBER=8
[2025-11-20 05:12:23] Starting ATLAS job with PandaID=6893829621
[2025-11-20 05:12:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 19:00:14]  *** The last 200 lines of the pilot log: ***
[2025-11-20 19:00:14] 2025-11-20 23:59:40,046 | INFO     | PID=13611 has CPU usage=14.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-20 19:00:14] 2025-11-20 23:59:41,046 | INFO     | time since job start (49618s) is within the limit (172800.0s)
[2025-11-20 19:00:14] 2025-11-20 23:59:41,599 | INFO     | monitor loop #3670: job 0:6893829621 is in state 'finished'
[2025-11-20 19:00:14] 2025-11-20 23:59:41,599 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 19:00:14] 2025-11-20 23:59:42,147 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-20 19:00:14] 2025-11-20 23:59:42,150 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-11-20 19:00:14] 2025-11-20 23:59:42,152 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893829621/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 19:00:14] 2025-11-20 23:59:42,153 | INFO     | extracted standard info from prmon json
[2025-11-20 19:00:14] 2025-11-20 23:59:42,153 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 19:00:14] 2025-11-20 23:59:42,154 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 19:00:14] 2025-11-20 23:59:42,166 | INFO     | fitting pss+swap vs Time
[2025-11-20 19:00:14] 2025-11-20 23:59:42,167 | INFO     | sum of square deviations: 166628593573.956
[2025-11-20 19:00:14] 2025-11-20 23:59:42,181 | INFO     | sum of deviations: 1018714595202.6339
[2025-11-20 19:00:14] 2025-11-20 23:59:42,181 | INFO     | mean x: 1763658362.00738
[2025-11-20 19:00:14] 2025-11-20 23:59:42,181 | INFO     | mean y: 2870840.894218942
[2025-11-20 19:00:14] 2025-11-20 23:59:42,182 | INFO     | intersect: -10779579372.434034
[2025-11-20 19:00:14] 2025-11-20 23:59:42,182 | INFO     | chi2: 5.529511488607506
[2025-11-20 19:00:14] 2025-11-20 23:59:42,183 | INFO     | sum of square deviations: 163573133463.95557
[2025-11-20 19:00:14] 2025-11-20 23:59:42,197 | INFO     | sum of deviations: 1254655401728.0002
[2025-11-20 19:00:14] 2025-11-20 23:59:42,197 | INFO     | mean x: 1763658209.5074258
[2025-11-20 19:00:14] 2025-11-20 23:59:42,197 | INFO     | mean y: 2882612.0
[2025-11-20 19:00:14] 2025-11-20 23:59:42,197 | INFO     | intersect: -13524909223.375134
[2025-11-20 19:00:14] 2025-11-20 23:59:42,198 | INFO     | chi2: 3.0748111751699145
[2025-11-20 19:00:14] 2025-11-20 23:59:42,198 | INFO     | current chi2=3.0748111751699145 (change=44.39271567651191 %)
[2025-11-20 19:00:14] 2025-11-20 23:59:42,199 | INFO     | sum of square deviations: 160555255453.95554
[2025-11-20 19:00:14] 2025-11-20 23:59:42,213 | INFO     | sum of deviations: 1358093630694.9895
[2025-11-20 19:00:14] 2025-11-20 23:59:42,213 | INFO     | mean x: 1763658057.007472
[2025-11-20 19:00:14] 2025-11-20 23:59:42,213 | INFO     | mean y: 2887831.6687422167
[2025-11-20 19:00:14] 2025-11-20 23:59:42,213 | INFO     | intersect: -14915420305.76033
[2025-11-20 19:00:14] 2025-11-20 23:59:42,214 | INFO     | chi2: 2.4373622989598966
[2025-11-20 19:00:14] 2025-11-20 23:59:42,214 | INFO     | current chi2=2.4373622989598966 (change=20.731317791402017 %)
[2025-11-20 19:00:14] 2025-11-20 23:59:42,214 | INFO     | right removable region: 802
[2025-11-20 19:00:14] 2025-11-20 23:59:42,215 | INFO     | sum of square deviations: 163573129803.95557
[2025-11-20 19:00:14] 2025-11-20 23:59:42,228 | INFO     | sum of deviations: 795436064552.7844
[2025-11-20 19:00:14] 2025-11-20 23:59:42,229 | INFO     | mean x: 1763658514.5074258
[2025-11-20 19:00:14] 2025-11-20 23:59:42,229 | INFO     | mean y: 2881969.785891089
[2025-11-20 19:00:14] 2025-11-20 23:59:42,229 | INFO     | intersect: -8573573036.462156
[2025-11-20 19:00:14] 2025-11-20 23:59:42,230 | INFO     | chi2: 3.3325375115736224
[2025-11-20 19:00:14] 2025-11-20 23:59:42,230 | INFO     | current chi2=3.3325375115736224 (change=39.731791525532145 %)
[2025-11-20 19:00:14] 2025-11-20 23:59:42,231 | INFO     | sum of square deviations: 160555248133.95554
[2025-11-20 19:00:14] 2025-11-20 23:59:42,244 | INFO     | sum of deviations: 734386745513.3372
[2025-11-20 19:00:14] 2025-11-20 23:59:42,244 | INFO     | mean x: 1763658667.007472
[2025-11-20 19:00:14] 2025-11-20 23:59:42,244 | INFO     | mean y: 2885053.777085928
[2025-11-20 19:00:14] 2025-11-20 23:59:42,244 | INFO     | intersect: -8064167027.755505
[2025-11-20 19:00:14] 2025-11-20 23:59:42,245 | INFO     | chi2: 3.2470418830848837
[2025-11-20 19:00:14] 2025-11-20 23:59:42,245 | INFO     | current chi2=3.2470418830848837 (change=2.5654813544279573 %)
[2025-11-20 19:00:14] 2025-11-20 23:59:42,245 | INFO     | left removable region: 20
[2025-11-20 19:00:14] 2025-11-20 23:59:42,246 | INFO     | sum of square deviations: 148285301233.45383
[2025-11-20 19:00:14] 2025-11-20 23:59:42,259 | INFO     | sum of deviations: 994455241811.1145
[2025-11-20 19:00:14] 2025-11-20 23:59:42,259 | INFO     | mean x: 1763658636.5076725
[2025-11-20 19:00:14] 2025-11-20 23:59:42,259 | INFO     | mean y: 2906743.3976982096
[2025-11-20 19:00:14] 2025-11-20 23:59:42,259 | INFO     | intersect: -11824830471.629889
[2025-11-20 19:00:14] 2025-11-20 23:59:42,260 | INFO     | chi2: 0.09748035344787348
[2025-11-20 19:00:14] 2025-11-20 23:59:42,260 | INFO     | current memory leak: 6.71 B/s (using 782 data points, chi2=0.10)
[2025-11-20 19:00:14] 2025-11-20 23:59:42,261 | INFO     | could have reported an average CPU frequency of 2159 MHz (31 samples)
[2025-11-20 19:00:14] 2025-11-20 23:59:42,261 | INFO     | ..............................
[2025-11-20 19:00:14] 2025-11-20 23:59:42,261 | INFO     | . Timing measurements:
[2025-11-20 19:00:14] 2025-11-20 23:59:42,261 | INFO     | . get job = 0 s
[2025-11-20 19:00:14] 2025-11-20 23:59:42,261 | INFO     | . initial setup = 2 s
[2025-11-20 19:00:14] 2025-11-20 23:59:42,261 | INFO     | . payload setup = 9 s
[2025-11-20 19:00:14] 2025-11-20 23:59:42,262 | INFO     | . stage-in = 0 s
[2025-11-20 19:00:14] 2025-11-20 23:59:42,262 | INFO     | . payload execution = 49575 s
[2025-11-20 19:00:14] 2025-11-20 23:59:42,262 | INFO     | . stage-out = 3 s
[2025-11-20 19:00:14] 2025-11-20 23:59:42,262 | INFO     | . log creation = 0 s
[2025-11-20 19:00:14] 2025-11-20 23:59:42,262 | INFO     | ..............................
[2025-11-20 19:00:14] 2025-11-20 23:59:42,696 | INFO     | 
[2025-11-20 19:00:14] 2025-11-20 23:59:42,696 | INFO     | job summary report
[2025-11-20 19:00:14] 2025-11-20 23:59:42,696 | INFO     | --------------------------------------------------
[2025-11-20 19:00:14] 2025-11-20 23:59:42,697 | INFO     | PanDA job id: 6893829621
[2025-11-20 19:00:14] 2025-11-20 23:59:42,697 | INFO     | task id: 47523449
[2025-11-20 19:00:14] 2025-11-20 23:59:42,697 | INFO     | errors: (none)
[2025-11-20 19:00:14] 2025-11-20 23:59:42,697 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 19:00:14] 2025-11-20 23:59:42,697 | INFO     | pilot state: finished 
[2025-11-20 19:00:14] 2025-11-20 23:59:42,697 | INFO     | transexitcode: 0
[2025-11-20 19:00:14] 2025-11-20 23:59:42,698 | INFO     | exeerrorcode: 0
[2025-11-20 19:00:14] 2025-11-20 23:59:42,698 | INFO     | exeerrordiag: 
[2025-11-20 19:00:14] 2025-11-20 23:59:42,698 | INFO     | exitcode: 0
[2025-11-20 19:00:14] 2025-11-20 23:59:42,698 | INFO     | exitmsg: OK
[2025-11-20 19:00:14] 2025-11-20 23:59:42,698 | INFO     | cpuconsumptiontime: 365095 s
[2025-11-20 19:00:14] 2025-11-20 23:59:42,699 | INFO     | nevents: 1000
[2025-11-20 19:00:14] 2025-11-20 23:59:42,699 | INFO     | neventsw: 0
[2025-11-20 19:00:14] 2025-11-20 23:59:42,699 | INFO     | pid: 20020
[2025-11-20 19:00:14] 2025-11-20 23:59:42,699 | INFO     | pgrp: 20020
[2025-11-20 19:00:14] 2025-11-20 23:59:42,699 | INFO     | corecount: 8
[2025-11-20 19:00:14] 2025-11-20 23:59:42,699 | INFO     | event service: False
[2025-11-20 19:00:14] 2025-11-20 23:59:42,700 | INFO     | sizes: {0: 2297207, 6: 2297469, 11: 2297497, 49588: 2345868, 49594: 2356514, 49601: 2356704}
[2025-11-20 19:00:14] 2025-11-20 23:59:42,700 | INFO     | --------------------------------------------------
[2025-11-20 19:00:14] 2025-11-20 23:59:42,700 | INFO     | 
[2025-11-20 19:00:14] 2025-11-20 23:59:42,700 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-20 19:00:14] 2025-11-20 23:59:42,731 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 19:00:14] 2025-11-20 23:59:42,731 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 19:00:14] 2025-11-20 23:59:42,732 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 19:00:14] 2025-11-20 23:59:42,732 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 19:00:14] 2025-11-20 23:59:42,732 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 19:00:14] 2025-11-20 23:59:42,732 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 19:00:14] 2025-11-20 23:59:42,733 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 19:00:14] 2025-11-20 23:59:42,733 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 19:00:14] 2025-11-20 23:59:42,733 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 19:00:14] 2025-11-20 23:59:42,733 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 19:00:14] 2025-11-20 23:59:42,734 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 19:00:14] 2025-11-20 23:59:42,734 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 19:00:14] 2025-11-20 23:59:42,734 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 19:00:14] 2025-11-20 23:59:42,734 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 19:00:14] 2025-11-20 23:59:42,734 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 19:00:14] 2025-11-20 23:59:42,735 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 19:00:14] 2025-11-20 23:59:42,735 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 19:00:14] 2025-11-20 23:59:42,735 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 19:00:14] 2025-11-20 23:59:42,735 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 19:00:14] 2025-11-20 23:59:42,735 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 19:00:14] 2025-11-20 23:59:42,736 | INFO     | job 6893829621 has completed (purged errors)
[2025-11-20 19:00:14] 2025-11-20 23:59:42,736 | INFO     | overall cleanup function is called
[2025-11-20 19:00:14] 2025-11-20 23:59:43,752 | INFO     | --- collectZombieJob: --- 10, [20020]
[2025-11-20 19:00:14] 2025-11-20 23:59:43,752 | INFO     | zombie collector waiting for pid 20020
[2025-11-20 19:00:14] 2025-11-20 23:59:43,753 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 19:00:14] 2025-11-20 23:59:43,753 | INFO     | collected zombie processes
[2025-11-20 19:00:14] 2025-11-20 23:59:43,753 | INFO     | will attempt to kill all subprocesses of pid=20020
[2025-11-20 19:00:14] 2025-11-20 23:59:43,848 | INFO     | process IDs to be killed: [20020] (in reverse order)
[2025-11-20 19:00:14] 2025-11-20 23:59:43,983 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 19:00:14] 2025-11-20 23:59:43,989 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 19:00:14] 2025-11-20 23:59:43,994 | INFO     | did not find any defunct processes belonging to 20020
[2025-11-20 19:00:14] 2025-11-20 23:59:43,997 | INFO     | did not find any defunct processes belonging to 20020
[2025-11-20 19:00:14] 2025-11-20 23:59:44,000 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 19:00:14] 2025-11-20 23:59:44,001 | INFO     | ready for new job
[2025-11-20 19:00:14] 2025-11-20 23:59:44,001 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 19:00:14] 2025-11-20 23:59:44,006 | INFO     | ***************************************
[2025-11-20 19:00:14] 2025-11-20 23:59:44,006 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 19:00:14] 2025-11-20 23:59:44,006 | INFO     | ***************************************
[2025-11-20 19:00:14] 2025-11-20 23:59:44,006 | INFO     | 
[2025-11-20 19:00:14] 2025-11-20 23:59:44,007 | INFO     | architecture information:
[2025-11-20 19:00:14] 2025-11-20 23:59:44,008 | INFO     | executing command: cat /etc/os-release
[2025-11-20 19:00:14] 2025-11-20 23:59:44,028 | INFO     | cat /etc/os-release:
[2025-11-20 19:00:14] NAME="CentOS Linux"
[2025-11-20 19:00:14] VERSION="7 (Core)"
[2025-11-20 19:00:14] ID="centos"
[2025-11-20 19:00:14] ID_LIKE="rhel fedora"
[2025-11-20 19:00:14] VERSION_ID="7"
[2025-11-20 19:00:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 19:00:14] ANSI_COLOR="0;31"
[2025-11-20 19:00:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 19:00:14] HOME_URL="https://www.centos.org/"
[2025-11-20 19:00:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 19:00:14] 
[2025-11-20 19:00:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 19:00:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 19:00:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 19:00:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 19:00:14] 
[2025-11-20 19:00:14] 2025-11-20 23:59:44,028 | INFO     | ***************************************
[2025-11-20 19:00:14] 2025-11-20 23:59:44,532 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-20 19:00:14] 2025-11-20 23:59:44,551 | INFO     | sufficient remaining disk space (17466130432 B)
[2025-11-20 19:00:14] 2025-11-20 23:59:44,552 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 19:00:14] 2025-11-20 23:59:44,552 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 19:00:14] 2025-11-20 23:59:44,552 | INFO     | update_server=False
[2025-11-20 19:00:14] 2025-11-20 23:59:44,552 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 19:00:14] 2025-11-20 23:59:44,794 | INFO     | all payload control threads have been joined
[2025-11-20 19:00:14] 2025-11-20 23:59:45,079 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 19:00:14] 2025-11-20 23:59:45,105 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 19:00:14] 2025-11-20 23:59:45,105 | INFO     | aborting loop
[2025-11-20 19:00:14] 2025-11-20 23:59:45,392 | INFO     | all job control threads have been joined
[2025-11-20 19:00:14] 2025-11-20 23:59:45,558 | INFO     | [job] retrieve thread has finished
[2025-11-20 19:00:14] 2025-11-20 23:59:45,601 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 19:00:14] 2025-11-20 23:59:45,646 | INFO     | all data control threads have been joined
[2025-11-20 19:00:14] 2025-11-20 23:59:45,798 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 19:00:14] 2025-11-20 23:59:45,800 | INFO     | [payload] control thread has finished
[2025-11-20 19:00:14] 2025-11-20 23:59:46,107 | INFO     | [job] job monitor thread has finished
[2025-11-20 19:00:14] 2025-11-20 23:59:46,363 | INFO     | [payload] validate_post thread has finished
[2025-11-20 19:00:14] 2025-11-20 23:59:46,398 | INFO     | [job] control thread has finished
[2025-11-20 19:00:14] 2025-11-20 23:59:46,530 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 19:00:14] 2025-11-20 23:59:46,645 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 19:00:14] 2025-11-20 23:59:46,651 | INFO     | [data] control thread has finished
[2025-11-20 19:00:14] 2025-11-20 23:59:46,805 | INFO     | [payload] failed_post thread has finished
[2025-11-20 19:00:14] 2025-11-20 23:59:46,979 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 19:00:14] 2025-11-20 23:59:46,979 | INFO     | [data] copytool_in thread has finished
[2025-11-20 19:00:14] 2025-11-20 23:59:47,060 | INFO     | [job] validate thread has finished
[2025-11-20 19:00:14] 2025-11-20 23:59:47,086 | INFO     | [data] copytool_out thread has finished
[2025-11-20 19:00:14] 2025-11-20 23:59:47,363 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 19:00:14] 2025-11-20 23:59:48,369 | INFO     | [job] queue monitor thread has finished
[2025-11-20 19:00:14] 2025-11-20 23:59:49,804 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 19:00:14] 2025-11-21 00:00:03,077 | INFO     | [monitor] cgroup control has ended
[2025-11-20 19:00:14] 2025-11-21 00:00:03,177 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140539737851712)>', '<ExcThread(monitor, started 140539282306816)>']
[2025-11-20 19:00:14] 2025-11-21 00:00:08,203 | INFO     | all workflow threads have been joined
[2025-11-20 19:00:14] 2025-11-21 00:00:08,203 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 19:00:14] 2025-11-21 00:00:08,212 | INFO     | traces error code: 0
[2025-11-20 19:00:14] 2025-11-21 00:00:08,212 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 19:00:14] 2025-11-21 00:00:14,271 | INFO     | PID=13611 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-20 19:00:14] 2025-11-21 00:00:14,271 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 19:00:14] 2025-11-21 00:00:14,272 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 19:00:14] 2025-11-21 00:00:14,272 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 19:00:14] 2025-11-21 00:00:14,272 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 19:00:14] 2025-11-21 00:00:14,272 | INFO     | [monitor] control thread has ended
[2025-11-20 19:00:14] 2025-11-21 00:00:14,401 [wrapper] ==== pilot stdout END ====
[2025-11-20 19:00:14] 2025-11-21 00:00:14,406 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 19:00:14] 2025-11-21 00:00:14,410 [wrapper] pilotpid: 13611
[2025-11-20 19:00:14] 2025-11-21 00:00:14,414 [wrapper] Pilot exit status: 0
[2025-11-20 19:00:14] 2025-11-21 00:00:14,429 [wrapper] pandaids: 6893829621
[2025-11-20 19:00:14] 2025-11-21 00:00:14,468 [wrapper] cleanup supervisor_pilot 18345 13612
[2025-11-20 19:00:14] 2025-11-21 00:00:14,472 [wrapper] Test setup, not cleaning
[2025-11-20 19:00:14] 2025-11-21 00:00:14,477 [wrapper] apfmon messages muted
[2025-11-20 19:00:14] 2025-11-21 00:00:14,480 [wrapper] ==== wrapper stdout END ====
[2025-11-20 19:00:14] 2025-11-21 00:00:14,485 [wrapper] ==== wrapper stderr END ====
[2025-11-20 19:00:14]  *** Error codes and diagnostics ***
[2025-11-20 19:00:14]     "exeErrorCode": 0,
[2025-11-20 19:00:14]     "exeErrorDiag": "",
[2025-11-20 19:00:14]     "pilotErrorCode": 0,
[2025-11-20 19:00:14]     "pilotErrorDiag": "",
[2025-11-20 19:00:14]  *** Listing of results directory ***
[2025-11-20 19:00:14] total 1319612
[2025-11-20 19:00:14] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 05:06 pilot3.tar.gz
[2025-11-20 19:00:14] -rwx------ 1 boincer umatlas     36292 Nov 20 05:10 runpilot2-wrapper.sh
[2025-11-20 19:00:14] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 05:11 queuedata.json
[2025-11-20 19:00:14] -rw-r--r-- 1 boincer umatlas       100 Nov 20 05:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 19:00:14] -rwxr-xr-x 1 boincer umatlas      7986 Nov 20 05:12 run_atlas
[2025-11-20 19:00:14] -rw-r--r-- 1 boincer umatlas       105 Nov 20 05:12 job.xml
[2025-11-20 19:00:14] -rw-r--r-- 2 boincer umatlas 411516262 Nov 20 05:12 EVNT.47493127._000013.pool.root.1
[2025-11-20 19:00:14] -rw-r--r-- 2 boincer umatlas     15847 Nov 20 05:12 start_atlas.sh
[2025-11-20 19:00:14] drwxrwx--x 2 boincer umatlas      4096 Nov 20 05:12 shared
[2025-11-20 19:00:14] -rw-r--r-- 2 boincer umatlas    590098 Nov 20 05:12 input.tar.gz
[2025-11-20 19:00:14] -rw-r--r-- 1 boincer umatlas         0 Nov 20 05:12 boinc_lockfile
[2025-11-20 19:00:14] -rw-r--r-- 1 boincer umatlas      2784 Nov 20 05:12 pandaJob.out
[2025-11-20 19:00:14] -rw------- 1 boincer umatlas        57 Nov 20 05:12 setup.sh.local
[2025-11-20 19:00:14] -rw------- 1 boincer umatlas    989435 Nov 20 05:12 agis_schedconf.cvmfs.json
[2025-11-20 19:00:14] drwx------ 5 boincer umatlas      4096 Nov 20 05:12 pilot3
[2025-11-20 19:00:14] -rw-r--r-- 1 boincer umatlas       532 Nov 20 18:47 boinc_task_state.xml
[2025-11-20 19:00:14] -rw-r--r-- 1 boincer umatlas      5911 Nov 20 18:56 init_data.xml
[2025-11-20 19:00:14] -rw------- 1 boincer umatlas 917984165 Nov 20 18:58 HITS.47523449._000125.pool.root.1
[2025-11-20 19:00:14] -rw------- 1 boincer umatlas        95 Nov 20 18:59 pilot_heartbeat.json
[2025-11-20 19:00:14] -rw------- 1 boincer umatlas      1061 Nov 20 18:59 memory_monitor_summary.json
[2025-11-20 19:00:14] -rw------- 1 boincer umatlas   1526164 Nov 20 18:59 agis_ddmendpoints.agis.ALL.json
[2025-11-20 19:00:14] -rw------- 1 boincer umatlas   2057807 Nov 20 18:59 log.47523449._000125.job.log.tgz.1
[2025-11-20 19:00:14] -rw------- 1 boincer umatlas      8657 Nov 20 18:59 heartbeat.json
[2025-11-20 19:00:14] -rw-r--r-- 1 boincer umatlas      8192 Nov 20 18:59 boinc_mmap_file
[2025-11-20 19:00:14] -rw-r--r-- 1 boincer umatlas        29 Nov 20 18:59 wrapper_checkpoint.txt
[2025-11-20 19:00:14] -rw------- 1 boincer umatlas       745 Nov 20 19:00 pilotlog.txt
[2025-11-20 19:00:14] -rw------- 1 boincer umatlas   6875661 Nov 20 19:00 log.47523449._000125.job.log.1
[2025-11-20 19:00:14] -rw------- 1 boincer umatlas       353 Nov 20 19:00 output.list
[2025-11-20 19:00:14] -rw-r--r-- 1 boincer umatlas       620 Nov 20 19:00 runtime_log
[2025-11-20 19:00:14] -rw------- 1 boincer umatlas   8949760 Nov 20 19:00 result.tar.gz
[2025-11-20 19:00:14] -rw-r--r-- 1 boincer umatlas      9338 Nov 20 19:00 runtime_log.err
[2025-11-20 19:00:14] -rw------- 1 boincer umatlas       669 Nov 20 19:00 Iz8LDmfnGg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmuCGKDmk3P7An.diag
[2025-11-20 19:00:14] -rw-r--r-- 1 boincer umatlas     21380 Nov 20 19:00 stderr.txt
[2025-11-20 19:00:14] HITS file was successfully produced:
[2025-11-20 19:00:14] -rw------- 1 boincer umatlas 917984165 Nov 20 18:58 shared/HITS.pool.root.1
[2025-11-20 19:00:14]  *** Contents of shared directory: ***
[2025-11-20 19:00:14] total 1307684
[2025-11-20 19:00:14] -rw-r--r-- 2 boincer umatlas 411516262 Nov 20 05:12 ATLAS.root_0
[2025-11-20 19:00:14] -rw-r--r-- 2 boincer umatlas     15847 Nov 20 05:12 start_atlas.sh
[2025-11-20 19:00:14] -rw-r--r-- 2 boincer umatlas    590098 Nov 20 05:12 input.tar.gz
[2025-11-20 19:00:14] -rw------- 1 boincer umatlas 917984165 Nov 20 18:58 HITS.pool.root.1
[2025-11-20 19:00:14] -rw------- 1 boincer umatlas   8949760 Nov 20 19:00 result.tar.gz
19:00:16 (9457): run_atlas exited; CPU time 354848.550853
19:00:16 (9457): called boinc_finish(0)

</stderr_txt>
]]>

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