Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:11:19 (32489): wrapper (7.7.26015): starting
05:11:19 (32489): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 05:11:19] Arguments: --nthreads 8
[2025-11-20 05:11:19] Threads: 8
[2025-11-20 05:11:19] Checking for CVMFS
[2025-11-20 05:11:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 05:11:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 05:11:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 05:11:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 05:11:20] 2.11.2.0 2888 40087 80700 153076 3 1 16497149 20275200 1 130560 0 6092172 99.697 2409140 32042 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 05:11:20] CVMFS is ok
[2025-11-20 05:11:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 05:11:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 05:11:20] Further information can be found at the LHC@home message board.
[2025-11-20 05:11:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 05:11:20] Checking for apptainer binary...
[2025-11-20 05:11:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 05:11:20] Running /usr/bin/apptainer --version
[2025-11-20 05:11:20] apptainer version 1.3.2-1.el7
[2025-11-20 05:11:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 05:11:21] c-204-6.aglt2.org
[2025-11-20 05:11:21] apptainer works
[2025-11-20 05:11:21] Set ATHENA_PROC_NUMBER=8
[2025-11-20 05:11:21] Set ATHENA_CORE_NUMBER=8
[2025-11-20 05:11:22] Starting ATLAS job with PandaID=6893833743
[2025-11-20 05:11:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 17:40:00]  *** The last 200 lines of the pilot log: ***
[2025-11-20 17:40:00] 2025-11-20 22:39:16,053 | INFO     | monitor loop #3293: job 0:6893833743 is in state 'finished'
[2025-11-20 17:40:00] 2025-11-20 22:39:16,053 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 17:40:00] 2025-11-20 22:39:16,533 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-20 17:40:00] 2025-11-20 22:39:16,539 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-11-20 17:40:00] 2025-11-20 22:39:16,541 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893833743/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 17:40:00] 2025-11-20 22:39:16,542 | INFO     | extracted standard info from prmon json
[2025-11-20 17:40:00] 2025-11-20 22:39:16,542 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 17:40:00] 2025-11-20 22:39:16,542 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 17:40:00] 2025-11-20 22:39:16,555 | INFO     | fitting pss+swap vs Time
[2025-11-20 17:40:00] 2025-11-20 22:39:16,556 | INFO     | sum of square deviations: 123123371293.09357
[2025-11-20 17:40:00] 2025-11-20 22:39:16,568 | INFO     | sum of deviations: 939511156563.5315
[2025-11-20 17:40:00] 2025-11-20 22:39:16,568 | INFO     | mean x: 1763655920.620408
[2025-11-20 17:40:00] 2025-11-20 22:39:16,568 | INFO     | mean y: 3172101.5646258504
[2025-11-20 17:40:00] 2025-11-20 22:39:16,568 | INFO     | intersect: -13454666133.044735
[2025-11-20 17:40:00] 2025-11-20 22:39:16,569 | INFO     | chi2: 5.475562693540692
[2025-11-20 17:40:00] 2025-11-20 22:39:16,570 | INFO     | sum of square deviations: 120627844973.65656
[2025-11-20 17:40:00] 2025-11-20 22:39:16,581 | INFO     | sum of deviations: 1180765519891.1016
[2025-11-20 17:40:00] 2025-11-20 22:39:16,581 | INFO     | mean x: 1763655768.1246576
[2025-11-20 17:40:00] 2025-11-20 22:39:16,581 | INFO     | mean y: 3186836.9109589043
[2025-11-20 17:40:00] 2025-11-20 22:39:16,581 | INFO     | intersect: -17260355593.225574
[2025-11-20 17:40:00] 2025-11-20 22:39:16,582 | INFO     | chi2: 2.9571291018839787
[2025-11-20 17:40:00] 2025-11-20 22:39:16,582 | INFO     | current chi2=2.9571291018839787 (change=45.994060019212476 %)
[2025-11-20 17:40:00] 2025-11-20 22:39:16,583 | INFO     | sum of square deviations: 118166228493.44832
[2025-11-20 17:40:00] 2025-11-20 22:39:16,593 | INFO     | sum of deviations: 1208958499518.8079
[2025-11-20 17:40:00] 2025-11-20 22:39:16,594 | INFO     | mean x: 1763655615.6275861
[2025-11-20 17:40:00] 2025-11-20 22:39:16,594 | INFO     | mean y: 3188574.1696551726
[2025-11-20 17:40:00] 2025-11-20 22:39:16,594 | INFO     | intersect: -18040769280.12764
[2025-11-20 17:40:00] 2025-11-20 22:39:16,595 | INFO     | chi2: 2.801113775458038
[2025-11-20 17:40:00] 2025-11-20 22:39:16,595 | INFO     | current chi2=2.801113775458038 (change=5.2759051448428 %)
[2025-11-20 17:40:00] 2025-11-20 22:39:16,595 | INFO     | right removable region: 724
[2025-11-20 17:40:00] 2025-11-20 22:39:16,596 | INFO     | sum of square deviations: 120627566813.65659
[2025-11-20 17:40:00] 2025-11-20 22:39:16,607 | INFO     | sum of deviations: 699734096616.7664
[2025-11-20 17:40:00] 2025-11-20 22:39:16,607 | INFO     | mean x: 1763656073.1246576
[2025-11-20 17:40:00] 2025-11-20 22:39:16,607 | INFO     | mean y: 3186731.0684931506
[2025-11-20 17:40:00] 2025-11-20 22:39:16,607 | INFO     | intersect: -10227395893.357296
[2025-11-20 17:40:00] 2025-11-20 22:39:16,608 | INFO     | chi2: 2.9040166395366214
[2025-11-20 17:40:00] 2025-11-20 22:39:16,608 | INFO     | current chi2=2.9040166395366214 (change=46.964050964800805 %)
[2025-11-20 17:40:00] 2025-11-20 22:39:16,609 | INFO     | sum of square deviations: 118165805397.7021
[2025-11-20 17:40:00] 2025-11-20 22:39:16,620 | INFO     | sum of deviations: 639046973008.1796
[2025-11-20 17:40:00] 2025-11-20 22:39:16,620 | INFO     | mean x: 1763656225.6262069
[2025-11-20 17:40:00] 2025-11-20 22:39:16,620 | INFO     | mean y: 3190488.9379310347
[2025-11-20 17:40:00] 2025-11-20 22:39:16,620 | INFO     | intersect: -9534756369.886387
[2025-11-20 17:40:00] 2025-11-20 22:39:16,621 | INFO     | chi2: 2.8170041829456656
[2025-11-20 17:40:00] 2025-11-20 22:39:16,621 | INFO     | current chi2=2.8170041829456656 (change=2.996279546278355 %)
[2025-11-20 17:40:00] 2025-11-20 22:39:16,621 | INFO     | left removable region: 20
[2025-11-20 17:40:00] 2025-11-20 22:39:16,622 | INFO     | sum of square deviations: 108192393536.18047
[2025-11-20 17:40:00] 2025-11-20 22:39:16,632 | INFO     | sum of deviations: 828090781961.3363
[2025-11-20 17:40:00] 2025-11-20 22:39:16,632 | INFO     | mean x: 1763656195.1349432
[2025-11-20 17:40:00] 2025-11-20 22:39:16,633 | INFO     | mean y: 3212363.2911931816
[2025-11-20 17:40:00] 2025-11-20 22:39:16,633 | INFO     | intersect: -13495587228.861813
[2025-11-20 17:40:00] 2025-11-20 22:39:16,634 | INFO     | chi2: 0.08100967360926496
[2025-11-20 17:40:00] 2025-11-20 22:39:16,634 | INFO     | current memory leak: 7.65 B/s (using 704 data points, chi2=0.08)
[2025-11-20 17:40:00] 2025-11-20 22:39:16,634 | INFO     | could have reported an average CPU frequency of 2169 MHz (28 samples)
[2025-11-20 17:40:00] 2025-11-20 22:39:16,634 | INFO     | ..............................
[2025-11-20 17:40:00] 2025-11-20 22:39:16,634 | INFO     | . Timing measurements:
[2025-11-20 17:40:00] 2025-11-20 22:39:16,635 | INFO     | . get job = 0 s
[2025-11-20 17:40:00] 2025-11-20 22:39:16,635 | INFO     | . initial setup = 3 s
[2025-11-20 17:40:00] 2025-11-20 22:39:16,635 | INFO     | . payload setup = 9 s
[2025-11-20 17:40:00] 2025-11-20 22:39:16,635 | INFO     | . stage-in = 0 s
[2025-11-20 17:40:00] 2025-11-20 22:39:16,635 | INFO     | . payload execution = 44812 s
[2025-11-20 17:40:00] 2025-11-20 22:39:16,635 | INFO     | . stage-out = 4 s
[2025-11-20 17:40:00] 2025-11-20 22:39:16,635 | INFO     | . log creation = 0 s
[2025-11-20 17:40:00] 2025-11-20 22:39:16,635 | INFO     | ..............................
[2025-11-20 17:40:00] 2025-11-20 22:39:16,726 | INFO     | 
[2025-11-20 17:40:00] 2025-11-20 22:39:16,726 | INFO     | job summary report
[2025-11-20 17:40:00] 2025-11-20 22:39:16,726 | INFO     | --------------------------------------------------
[2025-11-20 17:40:00] 2025-11-20 22:39:16,726 | INFO     | PanDA job id: 6893833743
[2025-11-20 17:40:00] 2025-11-20 22:39:16,726 | INFO     | task id: 47523449
[2025-11-20 17:40:00] 2025-11-20 22:39:16,726 | INFO     | errors: (none)
[2025-11-20 17:40:00] 2025-11-20 22:39:16,726 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 17:40:00] 2025-11-20 22:39:16,727 | INFO     | pilot state: finished 
[2025-11-20 17:40:00] 2025-11-20 22:39:16,727 | INFO     | transexitcode: 0
[2025-11-20 17:40:00] 2025-11-20 22:39:16,727 | INFO     | exeerrorcode: 0
[2025-11-20 17:40:00] 2025-11-20 22:39:16,727 | INFO     | exeerrordiag: 
[2025-11-20 17:40:00] 2025-11-20 22:39:16,727 | INFO     | exitcode: 0
[2025-11-20 17:40:00] 2025-11-20 22:39:16,727 | INFO     | exitmsg: OK
[2025-11-20 17:40:00] 2025-11-20 22:39:16,727 | INFO     | cpuconsumptiontime: 348610 s
[2025-11-20 17:40:00] 2025-11-20 22:39:16,727 | INFO     | nevents: 1000
[2025-11-20 17:40:00] 2025-11-20 22:39:16,728 | INFO     | neventsw: 0
[2025-11-20 17:40:00] 2025-11-20 22:39:16,728 | INFO     | pid: 10398
[2025-11-20 17:40:00] 2025-11-20 22:39:16,728 | INFO     | pgrp: 10398
[2025-11-20 17:40:00] 2025-11-20 22:39:16,728 | INFO     | corecount: 8
[2025-11-20 17:40:00] 2025-11-20 22:39:16,728 | INFO     | event service: False
[2025-11-20 17:40:00] 2025-11-20 22:39:16,728 | INFO     | sizes: {0: 2297030, 1: 2297229, 7: 2297491, 12: 2297519, 44825: 2343356, 44826: 2343355, 44831: 2354213, 44839: 2354403}
[2025-11-20 17:40:00] 2025-11-20 22:39:16,728 | INFO     | --------------------------------------------------
[2025-11-20 17:40:00] 2025-11-20 22:39:16,729 | INFO     | 
[2025-11-20 17:40:00] 2025-11-20 22:39:16,729 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-20 17:40:00] 2025-11-20 22:39:16,757 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 17:40:00] 2025-11-20 22:39:16,757 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 17:40:00] 2025-11-20 22:39:16,757 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 17:40:00] 2025-11-20 22:39:16,758 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 17:40:00] 2025-11-20 22:39:16,758 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 17:40:00] 2025-11-20 22:39:16,758 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 17:40:00] 2025-11-20 22:39:16,758 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 17:40:00] 2025-11-20 22:39:16,758 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 17:40:00] 2025-11-20 22:39:16,759 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 17:40:00] 2025-11-20 22:39:16,759 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 17:40:00] 2025-11-20 22:39:16,759 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 17:40:00] 2025-11-20 22:39:16,759 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 17:40:00] 2025-11-20 22:39:16,759 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 17:40:00] 2025-11-20 22:39:16,759 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 17:40:00] 2025-11-20 22:39:16,760 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 17:40:00] 2025-11-20 22:39:16,760 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 17:40:00] 2025-11-20 22:39:16,760 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 17:40:00] 2025-11-20 22:39:16,760 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 17:40:00] 2025-11-20 22:39:16,760 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 17:40:00] 2025-11-20 22:39:16,760 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 17:40:00] 2025-11-20 22:39:16,761 | INFO     | job 6893833743 has completed (purged errors)
[2025-11-20 17:40:00] 2025-11-20 22:39:16,761 | INFO     | overall cleanup function is called
[2025-11-20 17:40:00] 2025-11-20 22:39:17,776 | INFO     | --- collectZombieJob: --- 10, [10398]
[2025-11-20 17:40:00] 2025-11-20 22:39:17,777 | INFO     | zombie collector waiting for pid 10398
[2025-11-20 17:40:00] 2025-11-20 22:39:17,784 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 17:40:00] 2025-11-20 22:39:17,784 | INFO     | collected zombie processes
[2025-11-20 17:40:00] 2025-11-20 22:39:17,784 | INFO     | will attempt to kill all subprocesses of pid=10398
[2025-11-20 17:40:00] 2025-11-20 22:39:17,877 | INFO     | process IDs to be killed: [10398] (in reverse order)
[2025-11-20 17:40:00] 2025-11-20 22:39:17,941 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 17:40:00] 2025-11-20 22:39:17,941 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 17:40:00] 2025-11-20 22:39:17,946 | INFO     | did not find any defunct processes belonging to 10398
[2025-11-20 17:40:00] 2025-11-20 22:39:17,949 | INFO     | did not find any defunct processes belonging to 10398
[2025-11-20 17:40:00] 2025-11-20 22:39:17,952 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 17:40:00] 2025-11-20 22:39:17,952 | INFO     | ready for new job
[2025-11-20 17:40:00] 2025-11-20 22:39:17,952 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 17:40:00] 2025-11-20 22:39:17,955 | INFO     | ***************************************
[2025-11-20 17:40:00] 2025-11-20 22:39:17,956 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 17:40:00] 2025-11-20 22:39:17,956 | INFO     | ***************************************
[2025-11-20 17:40:00] 2025-11-20 22:39:17,956 | INFO     | 
[2025-11-20 17:40:00] 2025-11-20 22:39:17,956 | INFO     | architecture information:
[2025-11-20 17:40:00] 2025-11-20 22:39:17,957 | INFO     | executing command: cat /etc/os-release
[2025-11-20 17:40:00] 2025-11-20 22:39:17,978 | INFO     | cat /etc/os-release:
[2025-11-20 17:40:00] NAME="CentOS Linux"
[2025-11-20 17:40:00] VERSION="7 (Core)"
[2025-11-20 17:40:00] ID="centos"
[2025-11-20 17:40:00] ID_LIKE="rhel fedora"
[2025-11-20 17:40:00] VERSION_ID="7"
[2025-11-20 17:40:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 17:40:00] ANSI_COLOR="0;31"
[2025-11-20 17:40:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 17:40:00] HOME_URL="https://www.centos.org/"
[2025-11-20 17:40:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 17:40:00] 
[2025-11-20 17:40:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 17:40:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 17:40:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 17:40:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 17:40:00] 
[2025-11-20 17:40:00] 2025-11-20 22:39:17,978 | INFO     | ***************************************
[2025-11-20 17:40:00] 2025-11-20 22:39:18,482 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-20 17:40:00] 2025-11-20 22:39:18,502 | INFO     | sufficient remaining disk space (17445158912 B)
[2025-11-20 17:40:00] 2025-11-20 22:39:18,503 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 17:40:00] 2025-11-20 22:39:18,503 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 17:40:00] 2025-11-20 22:39:18,503 | INFO     | update_server=False
[2025-11-20 17:40:00] 2025-11-20 22:39:18,503 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 17:40:00] 2025-11-20 22:39:18,504 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 17:40:00] 2025-11-20 22:39:18,557 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-20 17:40:00] 2025-11-20 22:39:18,557 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-20 17:40:00] 2025-11-20 22:39:18,558 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 17:40:00] 2025-11-20 22:39:18,558 | INFO     | will abort loop
[2025-11-20 17:40:00] 2025-11-20 22:39:18,579 | INFO     | all data control threads have been joined
[2025-11-20 17:40:00] 2025-11-20 22:39:19,248 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 17:40:00] 2025-11-20 22:39:19,349 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 17:40:00] 2025-11-20 22:39:19,506 | INFO     | [job] queue monitor thread has finished
[2025-11-20 17:40:00] 2025-11-20 22:39:19,509 | INFO     | [job] retrieve thread has finished
[2025-11-20 17:40:00] 2025-11-20 22:39:19,564 | INFO     | [job] job monitor thread has finished
[2025-11-20 17:40:00] 2025-11-20 22:39:19,584 | INFO     | [data] control thread has finished
[2025-11-20 17:40:00] 2025-11-20 22:39:19,611 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 17:40:00] 2025-11-20 22:39:19,645 | INFO     | all job control threads have been joined
[2025-11-20 17:40:00] 2025-11-20 22:39:19,656 | INFO     | all payload control threads have been joined
[2025-11-20 17:40:00] 2025-11-20 22:39:20,060 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 17:40:00] 2025-11-20 22:39:20,510 | INFO     | [payload] failed_post thread has finished
[2025-11-20 17:40:00] 2025-11-20 22:39:20,565 | INFO     | [payload] validate_post thread has finished
[2025-11-20 17:40:00] 2025-11-20 22:39:20,650 | INFO     | [job] control thread has finished
[2025-11-20 17:40:00] 2025-11-20 22:39:20,658 | INFO     | [payload] control thread has finished
[2025-11-20 17:40:00] 2025-11-20 22:39:20,842 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 17:40:00] 2025-11-20 22:39:20,932 | INFO     | [job] validate thread has finished
[2025-11-20 17:40:00] 2025-11-20 22:39:20,946 | INFO     | [data] copytool_in thread has finished
[2025-11-20 17:40:00] 2025-11-20 22:39:21,009 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 17:40:00] 2025-11-20 22:39:21,254 | INFO     | [data] copytool_out thread has finished
[2025-11-20 17:40:00] 2025-11-20 22:39:23,355 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 17:40:00] 2025-11-20 22:39:48,725 | INFO     | PID=3846 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-20 17:40:00] 2025-11-20 22:39:48,725 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 17:40:00] 2025-11-20 22:39:48,725 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 17:40:00] 2025-11-20 22:39:48,725 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 17:40:00] 2025-11-20 22:39:55,055 | INFO     | [monitor] cgroup control has ended
[2025-11-20 17:40:00] 2025-11-20 22:39:55,334 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139914079971136)>', '<ExcThread(monitor, started 139912972064512)>']
[2025-11-20 17:40:00] 2025-11-20 22:39:55,761 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 17:40:00] 2025-11-20 22:39:55,762 | INFO     | [monitor] control thread has ended
[2025-11-20 17:40:00] 2025-11-20 22:40:00,359 | INFO     | all workflow threads have been joined
[2025-11-20 17:40:00] 2025-11-20 22:40:00,364 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 17:40:00] 2025-11-20 22:40:00,364 | INFO     | traces error code: 0
[2025-11-20 17:40:00] 2025-11-20 22:40:00,365 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 17:40:00] 2025-11-20 22:40:00,469 [wrapper] ==== pilot stdout END ====
[2025-11-20 17:40:00] 2025-11-20 22:40:00,474 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 17:40:00] 2025-11-20 22:40:00,478 [wrapper] pilotpid: 3846
[2025-11-20 17:40:00] 2025-11-20 22:40:00,483 [wrapper] Pilot exit status: 0
[2025-11-20 17:40:00] 2025-11-20 22:40:00,501 [wrapper] pandaids: 6893833743
[2025-11-20 17:40:00] 2025-11-20 22:40:00,548 [wrapper] cleanup supervisor_pilot  1562 3847
[2025-11-20 17:40:00] 2025-11-20 22:40:00,553 [wrapper] Test setup, not cleaning
[2025-11-20 17:40:00] 2025-11-20 22:40:00,558 [wrapper] apfmon messages muted
[2025-11-20 17:40:00] 2025-11-20 22:40:00,563 [wrapper] ==== wrapper stdout END ====
[2025-11-20 17:40:00] 2025-11-20 22:40:00,567 [wrapper] ==== wrapper stderr END ====
[2025-11-20 17:40:00]  *** Error codes and diagnostics ***
[2025-11-20 17:40:00]     "exeErrorCode": 0,
[2025-11-20 17:40:00]     "exeErrorDiag": "",
[2025-11-20 17:40:00]     "pilotErrorCode": 0,
[2025-11-20 17:40:00]     "pilotErrorDiag": "",
[2025-11-20 17:40:00]  *** Listing of results directory ***
[2025-11-20 17:40:00] total 1337780
[2025-11-20 17:40:00] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 05:06 pilot3.tar.gz
[2025-11-20 17:40:00] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 05:08 queuedata.json
[2025-11-20 17:40:00] -rwx------ 1 boincer umatlas     36292 Nov 20 05:09 runpilot2-wrapper.sh
[2025-11-20 17:40:00] -rw-r--r-- 1 boincer umatlas       100 Nov 20 05:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 17:40:00] -rwxr-xr-x 1 boincer umatlas      7986 Nov 20 05:11 run_atlas
[2025-11-20 17:40:00] -rw-r--r-- 1 boincer umatlas       105 Nov 20 05:11 job.xml
[2025-11-20 17:40:00] -rw-r--r-- 2 boincer umatlas 412439845 Nov 20 05:11 EVNT.47493127._000041.pool.root.1
[2025-11-20 17:40:00] -rw-r--r-- 2 boincer umatlas     15847 Nov 20 05:11 start_atlas.sh
[2025-11-20 17:40:00] drwxrwx--x 2 boincer umatlas      4096 Nov 20 05:11 shared
[2025-11-20 17:40:00] -rw-r--r-- 2 boincer umatlas    590104 Nov 20 05:11 input.tar.gz
[2025-11-20 17:40:00] -rw-r--r-- 1 boincer umatlas         0 Nov 20 05:11 boinc_lockfile
[2025-11-20 17:40:00] -rw-r--r-- 1 boincer umatlas      2781 Nov 20 05:11 pandaJob.out
[2025-11-20 17:40:00] -rw------- 1 boincer umatlas        57 Nov 20 05:11 setup.sh.local
[2025-11-20 17:40:00] -rw------- 1 boincer umatlas    989435 Nov 20 05:11 agis_schedconf.cvmfs.json
[2025-11-20 17:40:00] drwx------ 5 boincer umatlas      4096 Nov 20 05:11 pilot3
[2025-11-20 17:40:00] -rw-r--r-- 1 boincer umatlas       532 Nov 20 17:30 boinc_task_state.xml
[2025-11-20 17:40:00] -rw-r--r-- 1 boincer umatlas      5911 Nov 20 17:30 init_data.xml
[2025-11-20 17:40:00] -rw------- 1 boincer umatlas 937210142 Nov 20 17:38 HITS.47523449._000401.pool.root.1
[2025-11-20 17:40:00] -rw------- 1 boincer umatlas        95 Nov 20 17:38 pilot_heartbeat.json
[2025-11-20 17:40:00] -rw------- 1 boincer umatlas      1061 Nov 20 17:39 memory_monitor_summary.json
[2025-11-20 17:40:00] -rw------- 1 boincer umatlas   1526164 Nov 20 17:39 agis_ddmendpoints.agis.ALL.json
[2025-11-20 17:40:00] -rw------- 1 boincer umatlas   1977121 Nov 20 17:39 log.47523449._000401.job.log.tgz.1
[2025-11-20 17:40:00] -rw------- 1 boincer umatlas      8655 Nov 20 17:39 heartbeat.json
[2025-11-20 17:40:00] -rw-r--r-- 1 boincer umatlas        29 Nov 20 17:39 wrapper_checkpoint.txt
[2025-11-20 17:40:00] -rw-r--r-- 1 boincer umatlas      8192 Nov 20 17:39 boinc_mmap_file
[2025-11-20 17:40:00] -rw------- 1 boincer umatlas      4931 Nov 20 17:40 pilotlog.txt
[2025-11-20 17:40:00] -rw------- 1 boincer umatlas   6179697 Nov 20 17:40 log.47523449._000401.job.log.1
[2025-11-20 17:40:00] -rw------- 1 boincer umatlas       353 Nov 20 17:40 output.list
[2025-11-20 17:40:00] -rw-r--r-- 1 boincer umatlas       620 Nov 20 17:40 runtime_log
[2025-11-20 17:40:00] -rw------- 1 boincer umatlas   8171520 Nov 20 17:40 result.tar.gz
[2025-11-20 17:40:00] -rw-r--r-- 1 boincer umatlas      9338 Nov 20 17:40 runtime_log.err
[2025-11-20 17:40:00] -rw------- 1 boincer umatlas       667 Nov 20 17:40 eanKDmgmGg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmaBGKDmRHX95n.diag
[2025-11-20 17:40:00] -rw-r--r-- 1 boincer umatlas     21305 Nov 20 17:40 stderr.txt
[2025-11-20 17:40:00] HITS file was successfully produced:
[2025-11-20 17:40:00] -rw------- 1 boincer umatlas 937210142 Nov 20 17:38 shared/HITS.pool.root.1
[2025-11-20 17:40:00]  *** Contents of shared directory: ***
[2025-11-20 17:40:00] total 1326608
[2025-11-20 17:40:00] -rw-r--r-- 2 boincer umatlas 412439845 Nov 20 05:11 ATLAS.root_0
[2025-11-20 17:40:00] -rw-r--r-- 2 boincer umatlas     15847 Nov 20 05:11 start_atlas.sh
[2025-11-20 17:40:00] -rw-r--r-- 2 boincer umatlas    590104 Nov 20 05:11 input.tar.gz
[2025-11-20 17:40:00] -rw------- 1 boincer umatlas 937210142 Nov 20 17:38 HITS.pool.root.1
[2025-11-20 17:40:00] -rw------- 1 boincer umatlas   8171520 Nov 20 17:40 result.tar.gz
17:40:01 (32489): run_atlas exited; CPU time 346166.015459
17:40:01 (32489): called boinc_finish(0)

</stderr_txt>
]]>

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