Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:10:20 (31486): wrapper (7.7.26015): starting
05:10:20 (31486): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 05:10:20] Arguments: --nthreads 8
[2025-11-20 05:10:20] Threads: 8
[2025-11-20 05:10:20] Checking for CVMFS
[2025-11-20 05:10:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 05:10:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 05:10:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 05:10:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 05:10:21] 2.11.2.0 2831 34276 82136 153076 3 1 15395476 20275201 1 130560 0 2890781 99.326 2457818 26831 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 05:10:21] CVMFS is ok
[2025-11-20 05:10:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 05:10:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 05:10:21] Further information can be found at the LHC@home message board.
[2025-11-20 05:10:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 05:10:21] Checking for apptainer binary...
[2025-11-20 05:10:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 05:10:21] Running /usr/bin/apptainer --version
[2025-11-20 05:10:21] apptainer version 1.3.2-1.el7
[2025-11-20 05:10:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 05:10:23] c-204-31.aglt2.org
[2025-11-20 05:10:23] apptainer works
[2025-11-20 05:10:23] Set ATHENA_PROC_NUMBER=8
[2025-11-20 05:10:23] Set ATHENA_CORE_NUMBER=8
[2025-11-20 05:10:23] Starting ATLAS job with PandaID=6893827714
[2025-11-20 05:10:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 17:34:01]  *** The last 200 lines of the pilot log: ***
[2025-11-20 17:34:01] 2025-11-20 22:33:25,099 | INFO     | time since job start (44563s) is within the limit (172800.0s)
[2025-11-20 17:34:01] 2025-11-20 22:33:26,948 | INFO     | monitor loop #3274: job 0:6893827714 is in state 'finished'
[2025-11-20 17:34:01] 2025-11-20 22:33:26,948 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 17:34:01] 2025-11-20 22:33:27,104 | INFO     | time since job start (44565s) is within the limit (172800.0s)
[2025-11-20 17:34:01] 2025-11-20 22:33:27,923 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-20 17:34:01] 2025-11-20 22:33:27,929 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-11-20 17:34:01] 2025-11-20 22:33:27,931 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893827714/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 17:34:01] 2025-11-20 22:33:27,932 | INFO     | extracted standard info from prmon json
[2025-11-20 17:34:01] 2025-11-20 22:33:27,932 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 17:34:01] 2025-11-20 22:33:27,932 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 17:34:01] 2025-11-20 22:33:27,944 | INFO     | fitting pss+swap vs Time
[2025-11-20 17:34:01] 2025-11-20 22:33:27,945 | INFO     | sum of square deviations: 120628207989.28764
[2025-11-20 17:34:01] 2025-11-20 22:33:27,956 | INFO     | sum of deviations: 902488459977.1083
[2025-11-20 17:34:01] 2025-11-20 22:33:27,956 | INFO     | mean x: 1763655710.0958905
[2025-11-20 17:34:01] 2025-11-20 22:33:27,956 | INFO     | mean y: 3236507.3698630137
[2025-11-20 17:34:01] 2025-11-20 22:33:27,956 | INFO     | intersect: -13191678283.005056
[2025-11-20 17:34:01] 2025-11-20 22:33:27,957 | INFO     | chi2: 5.676127405982
[2025-11-20 17:34:01] 2025-11-20 22:33:27,958 | INFO     | sum of square deviations: 118166629390.00026
[2025-11-20 17:34:01] 2025-11-20 22:33:27,968 | INFO     | sum of deviations: 1160931668260.6006
[2025-11-20 17:34:01] 2025-11-20 22:33:27,969 | INFO     | mean x: 1763655557.6
[2025-11-20 17:34:01] 2025-11-20 22:33:27,969 | INFO     | mean y: 3252512.4675862067
[2025-11-20 17:34:01] 2025-11-20 22:33:27,969 | INFO     | intersect: -17323835509.685257
[2025-11-20 17:34:01] 2025-11-20 22:33:27,970 | INFO     | chi2: 2.8501699829827913
[2025-11-20 17:34:01] 2025-11-20 22:33:27,970 | INFO     | current chi2=2.8501699829827913 (change=49.78671585174369 %)
[2025-11-20 17:34:01] 2025-11-20 22:33:27,971 | INFO     | sum of square deviations: 115738772353.18744
[2025-11-20 17:34:01] 2025-11-20 22:33:27,981 | INFO     | sum of deviations: 1230379566634.875
[2025-11-20 17:34:01] 2025-11-20 22:33:27,981 | INFO     | mean x: 1763655405.1041667
[2025-11-20 17:34:01] 2025-11-20 22:33:27,982 | INFO     | mean y: 3256864.0416666665
[2025-11-20 17:34:01] 2025-11-20 22:33:27,982 | INFO     | intersect: -18745564545.636597
[2025-11-20 17:34:01] 2025-11-20 22:33:27,983 | INFO     | chi2: 2.4717107858650893
[2025-11-20 17:34:01] 2025-11-20 22:33:27,983 | INFO     | current chi2=2.4717107858650893 (change=13.278478104019353 %)
[2025-11-20 17:34:01] 2025-11-20 22:33:27,983 | INFO     | right removable region: 719
[2025-11-20 17:34:01] 2025-11-20 22:33:27,984 | INFO     | sum of square deviations: 118166364040.0001
[2025-11-20 17:34:01] 2025-11-20 22:33:27,994 | INFO     | sum of deviations: 675720465552.3995
[2025-11-20 17:34:01] 2025-11-20 22:33:27,995 | INFO     | mean x: 1763655862.6
[2025-11-20 17:34:01] 2025-11-20 22:33:27,995 | INFO     | mean y: 3250532.787586207
[2025-11-20 17:34:01] 2025-11-20 22:33:27,995 | INFO     | intersect: -10082008248.18734
[2025-11-20 17:34:01] 2025-11-20 22:33:27,996 | INFO     | chi2: 3.4275936423615745
[2025-11-20 17:34:01] 2025-11-20 22:33:27,996 | INFO     | current chi2=3.4275936423615745 (change=39.61387056341836 %)
[2025-11-20 17:34:01] 2025-11-20 22:33:27,997 | INFO     | sum of square deviations: 115738285634.39438
[2025-11-20 17:34:01] 2025-11-20 22:33:28,007 | INFO     | sum of deviations: 618173629904.7189
[2025-11-20 17:34:01] 2025-11-20 22:33:28,007 | INFO     | mean x: 1763656015.1027777
[2025-11-20 17:34:01] 2025-11-20 22:33:28,008 | INFO     | mean y: 3254146.990277778
[2025-11-20 17:34:01] 2025-11-20 22:33:28,008 | INFO     | intersect: -9416668005.678825
[2025-11-20 17:34:01] 2025-11-20 22:33:28,008 | INFO     | chi2: 3.3562557083037854
[2025-11-20 17:34:01] 2025-11-20 22:33:28,009 | INFO     | current chi2=3.3562557083037854 (change=2.081283299634027 %)
[2025-11-20 17:34:01] 2025-11-20 22:33:28,009 | INFO     | left removable region: 20
[2025-11-20 17:34:01] 2025-11-20 22:33:28,010 | INFO     | sum of square deviations: 105903962496.15742
[2025-11-20 17:34:01] 2025-11-20 22:33:28,020 | INFO     | sum of deviations: 861359109926.785
[2025-11-20 17:34:01] 2025-11-20 22:33:28,020 | INFO     | mean x: 1763655984.6108727
[2025-11-20 17:34:01] 2025-11-20 22:33:28,020 | INFO     | mean y: 3280252.712446352
[2025-11-20 17:34:01] 2025-11-20 22:33:28,020 | INFO     | intersect: -14341236357.575756
[2025-11-20 17:34:01] 2025-11-20 22:33:28,021 | INFO     | chi2: 0.0903740478147432
[2025-11-20 17:34:01] 2025-11-20 22:33:28,021 | INFO     | current memory leak: 8.13 B/s (using 699 data points, chi2=0.09)
[2025-11-20 17:34:01] 2025-11-20 22:33:28,022 | INFO     | could have reported an average CPU frequency of 2180 MHz (28 samples)
[2025-11-20 17:34:01] 2025-11-20 22:33:28,022 | INFO     | ..............................
[2025-11-20 17:34:01] 2025-11-20 22:33:28,022 | INFO     | . Timing measurements:
[2025-11-20 17:34:01] 2025-11-20 22:33:28,022 | INFO     | . get job = 0 s
[2025-11-20 17:34:01] 2025-11-20 22:33:28,022 | INFO     | . initial setup = 2 s
[2025-11-20 17:34:01] 2025-11-20 22:33:28,022 | INFO     | . payload setup = 9 s
[2025-11-20 17:34:01] 2025-11-20 22:33:28,022 | INFO     | . stage-in = 0 s
[2025-11-20 17:34:01] 2025-11-20 22:33:28,023 | INFO     | . payload execution = 44521 s
[2025-11-20 17:34:01] 2025-11-20 22:33:28,023 | INFO     | . stage-out = 3 s
[2025-11-20 17:34:01] 2025-11-20 22:33:28,023 | INFO     | . log creation = 0 s
[2025-11-20 17:34:01] 2025-11-20 22:33:28,023 | INFO     | ..............................
[2025-11-20 17:34:01] 2025-11-20 22:33:28,112 | INFO     | 
[2025-11-20 17:34:01] 2025-11-20 22:33:28,112 | INFO     | job summary report
[2025-11-20 17:34:01] 2025-11-20 22:33:28,112 | INFO     | --------------------------------------------------
[2025-11-20 17:34:01] 2025-11-20 22:33:28,112 | INFO     | PanDA job id: 6893827714
[2025-11-20 17:34:01] 2025-11-20 22:33:28,112 | INFO     | task id: 47523449
[2025-11-20 17:34:01] 2025-11-20 22:33:28,113 | INFO     | errors: (none)
[2025-11-20 17:34:01] 2025-11-20 22:33:28,113 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 17:34:01] 2025-11-20 22:33:28,113 | INFO     | pilot state: finished 
[2025-11-20 17:34:01] 2025-11-20 22:33:28,113 | INFO     | transexitcode: 0
[2025-11-20 17:34:01] 2025-11-20 22:33:28,113 | INFO     | exeerrorcode: 0
[2025-11-20 17:34:01] 2025-11-20 22:33:28,113 | INFO     | exeerrordiag: 
[2025-11-20 17:34:01] 2025-11-20 22:33:28,114 | INFO     | exitcode: 0
[2025-11-20 17:34:01] 2025-11-20 22:33:28,114 | INFO     | exitmsg: OK
[2025-11-20 17:34:01] 2025-11-20 22:33:28,114 | INFO     | cpuconsumptiontime: 345807 s
[2025-11-20 17:34:01] 2025-11-20 22:33:28,114 | INFO     | nevents: 1000
[2025-11-20 17:34:01] 2025-11-20 22:33:28,114 | INFO     | neventsw: 0
[2025-11-20 17:34:01] 2025-11-20 22:33:28,114 | INFO     | pid: 9446
[2025-11-20 17:34:01] 2025-11-20 22:33:28,115 | INFO     | pgrp: 9446
[2025-11-20 17:34:01] 2025-11-20 22:33:28,115 | INFO     | corecount: 8
[2025-11-20 17:34:01] 2025-11-20 22:33:28,115 | INFO     | event service: False
[2025-11-20 17:34:01] 2025-11-20 22:33:28,115 | INFO     | sizes: {0: 2296972, 1: 2297227, 7: 2297489, 12: 2297517, 44533: 2343296, 44537: 2353886, 44540: 2354070, 44548: 2354316}
[2025-11-20 17:34:01] 2025-11-20 22:33:28,115 | INFO     | --------------------------------------------------
[2025-11-20 17:34:01] 2025-11-20 22:33:28,116 | INFO     | 
[2025-11-20 17:34:01] 2025-11-20 22:33:28,116 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-20 17:34:01] 2025-11-20 22:33:28,146 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 17:34:01] 2025-11-20 22:33:28,147 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 17:34:01] 2025-11-20 22:33:28,147 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 17:34:01] 2025-11-20 22:33:28,147 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 17:34:01] 2025-11-20 22:33:28,147 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 17:34:01] 2025-11-20 22:33:28,147 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 17:34:01] 2025-11-20 22:33:28,148 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 17:34:01] 2025-11-20 22:33:28,148 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 17:34:01] 2025-11-20 22:33:28,148 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 17:34:01] 2025-11-20 22:33:28,148 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 17:34:01] 2025-11-20 22:33:28,148 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 17:34:01] 2025-11-20 22:33:28,148 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 17:34:01] 2025-11-20 22:33:28,149 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 17:34:01] 2025-11-20 22:33:28,149 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 17:34:01] 2025-11-20 22:33:28,149 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 17:34:01] 2025-11-20 22:33:28,149 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 17:34:01] 2025-11-20 22:33:28,150 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 17:34:01] 2025-11-20 22:33:28,150 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 17:34:01] 2025-11-20 22:33:28,150 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 17:34:01] 2025-11-20 22:33:28,150 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 17:34:01] 2025-11-20 22:33:28,150 | INFO     | job 6893827714 has completed (purged errors)
[2025-11-20 17:34:01] 2025-11-20 22:33:28,151 | INFO     | overall cleanup function is called
[2025-11-20 17:34:01] 2025-11-20 22:33:29,163 | INFO     | --- collectZombieJob: --- 10, [9446]
[2025-11-20 17:34:01] 2025-11-20 22:33:29,163 | INFO     | zombie collector waiting for pid 9446
[2025-11-20 17:34:01] 2025-11-20 22:33:29,164 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 17:34:01] 2025-11-20 22:33:29,164 | INFO     | collected zombie processes
[2025-11-20 17:34:01] 2025-11-20 22:33:29,164 | INFO     | will attempt to kill all subprocesses of pid=9446
[2025-11-20 17:34:01] 2025-11-20 22:33:29,255 | INFO     | process IDs to be killed: [9446] (in reverse order)
[2025-11-20 17:34:01] 2025-11-20 22:33:29,319 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 17:34:01] 2025-11-20 22:33:29,320 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 17:34:01] 2025-11-20 22:33:29,324 | INFO     | did not find any defunct processes belonging to 9446
[2025-11-20 17:34:01] 2025-11-20 22:33:29,328 | INFO     | did not find any defunct processes belonging to 9446
[2025-11-20 17:34:01] 2025-11-20 22:33:29,331 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 17:34:01] 2025-11-20 22:33:29,331 | INFO     | ready for new job
[2025-11-20 17:34:01] 2025-11-20 22:33:29,331 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 17:34:01] 2025-11-20 22:33:29,335 | INFO     | ***************************************
[2025-11-20 17:34:01] 2025-11-20 22:33:29,335 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 17:34:01] 2025-11-20 22:33:29,335 | INFO     | ***************************************
[2025-11-20 17:34:01] 2025-11-20 22:33:29,335 | INFO     | 
[2025-11-20 17:34:01] 2025-11-20 22:33:29,336 | INFO     | architecture information:
[2025-11-20 17:34:01] 2025-11-20 22:33:29,336 | INFO     | executing command: cat /etc/os-release
[2025-11-20 17:34:01] 2025-11-20 22:33:29,356 | INFO     | cat /etc/os-release:
[2025-11-20 17:34:01] NAME="CentOS Linux"
[2025-11-20 17:34:01] VERSION="7 (Core)"
[2025-11-20 17:34:01] ID="centos"
[2025-11-20 17:34:01] ID_LIKE="rhel fedora"
[2025-11-20 17:34:01] VERSION_ID="7"
[2025-11-20 17:34:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 17:34:01] ANSI_COLOR="0;31"
[2025-11-20 17:34:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 17:34:01] HOME_URL="https://www.centos.org/"
[2025-11-20 17:34:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 17:34:01] 
[2025-11-20 17:34:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 17:34:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 17:34:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 17:34:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 17:34:01] 
[2025-11-20 17:34:01] 2025-11-20 22:33:29,357 | INFO     | ***************************************
[2025-11-20 17:34:01] 2025-11-20 22:33:29,860 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-20 17:34:01] 2025-11-20 22:33:29,883 | INFO     | sufficient remaining disk space (17431527424 B)
[2025-11-20 17:34:01] 2025-11-20 22:33:29,884 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 17:34:01] 2025-11-20 22:33:29,884 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 17:34:01] 2025-11-20 22:33:29,885 | INFO     | update_server=False
[2025-11-20 17:34:01] 2025-11-20 22:33:29,885 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 17:34:01] 2025-11-20 22:33:29,885 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 17:34:01] 2025-11-20 22:33:30,100 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 17:34:01] 2025-11-20 22:33:30,208 | INFO     | all payload control threads have been joined
[2025-11-20 17:34:01] 2025-11-20 22:33:30,211 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 17:34:01] 2025-11-20 22:33:30,528 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 17:34:01] 2025-11-20 22:33:30,528 | INFO     | aborting loop
[2025-11-20 17:34:01] 2025-11-20 22:33:30,886 | INFO     | [job] queue monitor thread has finished
[2025-11-20 17:34:01] 2025-11-20 22:33:30,890 | INFO     | [job] retrieve thread has finished
[2025-11-20 17:34:01] 2025-11-20 22:33:30,897 | INFO     | all data control threads have been joined
[2025-11-20 17:34:01] 2025-11-20 22:33:30,910 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 17:34:01] 2025-11-20 22:33:31,076 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 17:34:01] 2025-11-20 22:33:31,087 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 17:34:01] 2025-11-20 22:33:31,091 | INFO     | all job control threads have been joined
[2025-11-20 17:34:01] 2025-11-20 22:33:31,210 | INFO     | [payload] control thread has finished
[2025-11-20 17:34:01] 2025-11-20 22:33:31,534 | INFO     | [job] job monitor thread has finished
[2025-11-20 17:34:01] 2025-11-20 22:33:31,595 | INFO     | [job] validate thread has finished
[2025-11-20 17:34:01] 2025-11-20 22:33:31,885 | INFO     | [payload] validate_post thread has finished
[2025-11-20 17:34:01] 2025-11-20 22:33:31,900 | INFO     | [data] control thread has finished
[2025-11-20 17:34:01] 2025-11-20 22:33:31,952 | INFO     | [data] copytool_in thread has finished
[2025-11-20 17:34:01] 2025-11-20 22:33:32,092 | INFO     | [job] control thread has finished
[2025-11-20 17:34:01] 2025-11-20 22:33:32,106 | INFO     | [data] copytool_out thread has finished
[2025-11-20 17:34:01] 2025-11-20 22:33:32,198 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 17:34:01] 2025-11-20 22:33:32,230 | INFO     | [payload] failed_post thread has finished
[2025-11-20 17:34:01] 2025-11-20 22:33:34,217 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 17:34:01] 2025-11-20 22:33:55,431 | INFO     | [monitor] cgroup control has ended
[2025-11-20 17:34:01] 2025-11-20 22:33:56,437 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140024978401088)>', '<ExcThread(monitor, started 140024683144960)>']
[2025-11-20 17:34:01] 2025-11-20 22:34:00,312 | INFO     | PID=2847 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-20 17:34:01] 2025-11-20 22:34:00,313 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 17:34:01] 2025-11-20 22:34:00,313 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 17:34:01] 2025-11-20 22:34:00,313 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 17:34:01] 2025-11-20 22:34:00,314 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 17:34:01] 2025-11-20 22:34:00,314 | INFO     | [monitor] control thread has ended
[2025-11-20 17:34:01] 2025-11-20 22:34:01,455 | INFO     | all workflow threads have been joined
[2025-11-20 17:34:01] 2025-11-20 22:34:01,455 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 17:34:01] 2025-11-20 22:34:01,456 | INFO     | traces error code: 0
[2025-11-20 17:34:01] 2025-11-20 22:34:01,456 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 17:34:01] 2025-11-20 22:34:01,561 [wrapper] ==== pilot stdout END ====
[2025-11-20 17:34:01] 2025-11-20 22:34:01,566 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 17:34:01] 2025-11-20 22:34:01,571 [wrapper] pilotpid: 2847
[2025-11-20 17:34:01] 2025-11-20 22:34:01,576 [wrapper] Pilot exit status: 0
[2025-11-20 17:34:01] 2025-11-20 22:34:01,588 [wrapper] pandaids: 6893827714
[2025-11-20 17:34:01] 2025-11-20 22:34:01,631 [wrapper] cleanup supervisor_pilot 29664 2848
[2025-11-20 17:34:01] 2025-11-20 22:34:01,635 [wrapper] Test setup, not cleaning
[2025-11-20 17:34:01] 2025-11-20 22:34:01,639 [wrapper] apfmon messages muted
[2025-11-20 17:34:01] 2025-11-20 22:34:01,643 [wrapper] ==== wrapper stdout END ====
[2025-11-20 17:34:01] 2025-11-20 22:34:01,647 [wrapper] ==== wrapper stderr END ====
[2025-11-20 17:34:01]  *** Error codes and diagnostics ***
[2025-11-20 17:34:01]     "exeErrorCode": 0,
[2025-11-20 17:34:01]     "exeErrorDiag": "",
[2025-11-20 17:34:01]     "pilotErrorCode": 0,
[2025-11-20 17:34:01]     "pilotErrorDiag": "",
[2025-11-20 17:34:01]  *** Listing of results directory ***
[2025-11-20 17:34:01] total 1320844
[2025-11-20 17:34:01] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 05:06 pilot3.tar.gz
[2025-11-20 17:34:01] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 05:08 queuedata.json
[2025-11-20 17:34:01] -rwx------ 1 boincer umatlas     36292 Nov 20 05:09 runpilot2-wrapper.sh
[2025-11-20 17:34:01] -rw-r--r-- 1 boincer umatlas       100 Nov 20 05:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 17:34:01] -rwxr-xr-x 1 boincer umatlas      7986 Nov 20 05:10 run_atlas
[2025-11-20 17:34:01] -rw-r--r-- 1 boincer umatlas       105 Nov 20 05:10 job.xml
[2025-11-20 17:34:01] -rw-r--r-- 2 boincer umatlas 411066350 Nov 20 05:10 EVNT.47493127._000001.pool.root.1
[2025-11-20 17:34:01] -rw-r--r-- 2 boincer umatlas     15847 Nov 20 05:10 start_atlas.sh
[2025-11-20 17:34:01] drwxrwx--x 2 boincer umatlas      4096 Nov 20 05:10 shared
[2025-11-20 17:34:01] -rw-r--r-- 2 boincer umatlas    590091 Nov 20 05:10 input.tar.gz
[2025-11-20 17:34:01] -rw-r--r-- 1 boincer umatlas         0 Nov 20 05:10 boinc_lockfile
[2025-11-20 17:34:01] -rw-r--r-- 1 boincer umatlas      2780 Nov 20 05:10 pandaJob.out
[2025-11-20 17:34:01] -rw------- 1 boincer umatlas        57 Nov 20 05:10 setup.sh.local
[2025-11-20 17:34:01] -rw------- 1 boincer umatlas    989435 Nov 20 05:10 agis_schedconf.cvmfs.json
[2025-11-20 17:34:01] drwx------ 5 boincer umatlas      4096 Nov 20 05:10 pilot3
[2025-11-20 17:34:01] -rw-r--r-- 1 boincer umatlas       533 Nov 20 17:23 boinc_task_state.xml
[2025-11-20 17:34:01] -rw-r--r-- 1 boincer umatlas      5911 Nov 20 17:27 init_data.xml
[2025-11-20 17:34:01] -rw------- 1 boincer umatlas 921310261 Nov 20 17:32 HITS.47523449._000004.pool.root.1
[2025-11-20 17:34:01] -rw------- 1 boincer umatlas      1062 Nov 20 17:33 memory_monitor_summary.json
[2025-11-20 17:34:01] -rw------- 1 boincer umatlas   1526164 Nov 20 17:33 agis_ddmendpoints.agis.ALL.json
[2025-11-20 17:34:01] -rw------- 1 boincer umatlas   1975777 Nov 20 17:33 log.47523449._000004.job.log.tgz.1
[2025-11-20 17:34:01] -rw------- 1 boincer umatlas      8656 Nov 20 17:33 heartbeat.json
[2025-11-20 17:34:01] -rw-r--r-- 1 boincer umatlas      8192 Nov 20 17:33 boinc_mmap_file
[2025-11-20 17:34:01] -rw-r--r-- 1 boincer umatlas        29 Nov 20 17:33 wrapper_checkpoint.txt
[2025-11-20 17:34:01] -rw------- 1 boincer umatlas        95 Nov 20 17:34 pilot_heartbeat.json
[2025-11-20 17:34:01] -rw------- 1 boincer umatlas      4745 Nov 20 17:34 pilotlog.txt
[2025-11-20 17:34:01] -rw------- 1 boincer umatlas   6142507 Nov 20 17:34 log.47523449._000004.job.log.1
[2025-11-20 17:34:01] -rw------- 1 boincer umatlas       353 Nov 20 17:34 output.list
[2025-11-20 17:34:01] -rw-r--r-- 1 boincer umatlas       620 Nov 20 17:34 runtime_log
[2025-11-20 17:34:01] -rw------- 1 boincer umatlas   8140800 Nov 20 17:34 result.tar.gz
[2025-11-20 17:34:01] -rw------- 1 boincer umatlas       668 Nov 20 17:34 X5RNDmjmGg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDme8GKDmqytBhn.diag
[2025-11-20 17:34:01] -rw-r--r-- 1 boincer umatlas      9343 Nov 20 17:34 runtime_log.err
[2025-11-20 17:34:01] -rw-r--r-- 1 boincer umatlas     21293 Nov 20 17:34 stderr.txt
[2025-11-20 17:34:01] HITS file was successfully produced:
[2025-11-20 17:34:01] -rw------- 1 boincer umatlas 921310261 Nov 20 17:32 shared/HITS.pool.root.1
[2025-11-20 17:34:01]  *** Contents of shared directory: ***
[2025-11-20 17:34:01] total 1309708
[2025-11-20 17:34:01] -rw-r--r-- 2 boincer umatlas 411066350 Nov 20 05:10 ATLAS.root_0
[2025-11-20 17:34:01] -rw-r--r-- 2 boincer umatlas     15847 Nov 20 05:10 start_atlas.sh
[2025-11-20 17:34:01] -rw-r--r-- 2 boincer umatlas    590091 Nov 20 05:10 input.tar.gz
[2025-11-20 17:34:01] -rw------- 1 boincer umatlas 921310261 Nov 20 17:32 HITS.pool.root.1
[2025-11-20 17:34:01] -rw------- 1 boincer umatlas   8140800 Nov 20 17:34 result.tar.gz
17:34:03 (31486): run_atlas exited; CPU time 343424.925444
17:34:03 (31486): called boinc_finish(0)

</stderr_txt>
]]>

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