Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:43:18 (25925): wrapper (7.7.26015): starting
04:43:18 (25925): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 04:43:18] Arguments: --nthreads 8
[2025-11-20 04:43:18] Threads: 8
[2025-11-20 04:43:18] Checking for CVMFS
[2025-11-20 04:43:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 04:43:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 04:43:18] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 04:43:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 04:43:18] 2.11.2.0 2830 45664 85476 153076 1 1 17371148 20275201 1 130560 0 8368497 99.713 2991776 30294 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 04:43:18] CVMFS is ok
[2025-11-20 04:43:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 04:43:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 04:43:18] Further information can be found at the LHC@home message board.
[2025-11-20 04:43:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 04:43:18] Checking for apptainer binary...
[2025-11-20 04:43:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 04:43:18] Running /usr/bin/apptainer --version
[2025-11-20 04:43:18] apptainer version 1.3.2-1.el7
[2025-11-20 04:43:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 04:43:20] c-204-14.aglt2.org
[2025-11-20 04:43:20] apptainer works
[2025-11-20 04:43:20] Set ATHENA_PROC_NUMBER=8
[2025-11-20 04:43:20] Set ATHENA_CORE_NUMBER=8
[2025-11-20 04:43:20] Starting ATLAS job with PandaID=6891565703
[2025-11-20 04:43:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 17:11:59]  *** The last 200 lines of the pilot log: ***
[2025-11-20 17:11:59] 2025-11-20 22:11:19,349 | INFO     | time since job start (44861s) is within the limit (172800.0s)
[2025-11-20 17:11:59] 2025-11-20 22:11:19,927 | INFO     | monitor loop #3298: job 0:6891565703 is in state 'finished'
[2025-11-20 17:11:59] 2025-11-20 22:11:19,927 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 17:11:59] 2025-11-20 22:11:21,328 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-20 17:11:59] 2025-11-20 22:11:21,330 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1795.75
[2025-11-20 17:11:59] 2025-11-20 22:11:21,332 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6891565703/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 17:11:59] 2025-11-20 22:11:21,333 | INFO     | extracted standard info from prmon json
[2025-11-20 17:11:59] 2025-11-20 22:11:21,333 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 17:11:59] 2025-11-20 22:11:21,333 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 17:11:59] 2025-11-20 22:11:21,346 | INFO     | fitting pss+swap vs Time
[2025-11-20 17:11:59] 2025-11-20 22:11:21,347 | INFO     | sum of square deviations: 123123435467.36609
[2025-11-20 17:11:59] 2025-11-20 22:11:21,358 | INFO     | sum of deviations: 859717407683.831
[2025-11-20 17:11:59] 2025-11-20 22:11:21,359 | INFO     | time since job start (44863s) is within the limit (172800.0s)
[2025-11-20 17:11:59] 2025-11-20 22:11:21,359 | INFO     | mean x: 1763654238.6068027
[2025-11-20 17:11:59] 2025-11-20 22:11:21,359 | INFO     | mean y: 3054076.4734693877
[2025-11-20 17:11:59] 2025-11-20 22:11:21,360 | INFO     | intersect: -12311776518.612732
[2025-11-20 17:11:59] 2025-11-20 22:11:21,360 | INFO     | chi2: 5.762329818766286
[2025-11-20 17:11:59] 2025-11-20 22:11:21,361 | INFO     | sum of square deviations: 120627906098.01215
[2025-11-20 17:11:59] 2025-11-20 22:11:21,373 | INFO     | sum of deviations: 1092140301772.5696
[2025-11-20 17:11:59] 2025-11-20 22:11:21,373 | INFO     | mean x: 1763654086.1109588
[2025-11-20 17:11:59] 2025-11-20 22:11:21,373 | INFO     | mean y: 3068273.1287671234
[2025-11-20 17:11:59] 2025-11-20 22:11:21,374 | INFO     | intersect: -15964693815.5426
[2025-11-20 17:11:59] 2025-11-20 22:11:21,374 | INFO     | chi2: 3.2125088892607505
[2025-11-20 17:11:59] 2025-11-20 22:11:21,375 | INFO     | current chi2=3.2125088892607505 (change=44.24982619359077 %)
[2025-11-20 17:11:59] 2025-11-20 22:11:21,375 | INFO     | sum of square deviations: 118166330853.63358
[2025-11-20 17:11:59] 2025-11-20 22:11:21,387 | INFO     | sum of deviations: 1188997006925.2317
[2025-11-20 17:11:59] 2025-11-20 22:11:21,387 | INFO     | mean x: 1763653933.6151724
[2025-11-20 17:11:59] 2025-11-20 22:11:21,387 | INFO     | mean y: 3074266.5062068966
[2025-11-20 17:11:59] 2025-11-20 22:11:21,387 | INFO     | intersect: -17742921849.06896
[2025-11-20 17:11:59] 2025-11-20 22:11:21,388 | INFO     | chi2: 2.629573314289953
[2025-11-20 17:11:59] 2025-11-20 22:11:21,388 | INFO     | current chi2=2.629573314289953 (change=18.145804262815297 %)
[2025-11-20 17:11:59] 2025-11-20 22:11:21,388 | INFO     | right removable region: 724
[2025-11-20 17:11:59] 2025-11-20 22:11:21,389 | INFO     | sum of square deviations: 120627634038.0122
[2025-11-20 17:11:59] 2025-11-20 22:11:21,400 | INFO     | sum of deviations: 637120288706.6002
[2025-11-20 17:11:59] 2025-11-20 22:11:21,400 | INFO     | mean x: 1763654391.1109588
[2025-11-20 17:11:59] 2025-11-20 22:11:21,400 | INFO     | mean y: 3067655.4
[2025-11-20 17:11:59] 2025-11-20 22:11:21,401 | INFO     | intersect: -9312044953.781982
[2025-11-20 17:11:59] 2025-11-20 22:11:21,401 | INFO     | chi2: 3.309858720558936
[2025-11-20 17:11:59] 2025-11-20 22:11:21,401 | INFO     | current chi2=3.309858720558936 (change=42.56040829562276 %)
[2025-11-20 17:11:59] 2025-11-20 22:11:21,402 | INFO     | sum of square deviations: 118165831263.86215
[2025-11-20 17:11:59] 2025-11-20 22:11:21,413 | INFO     | sum of deviations: 589134499733.7173
[2025-11-20 17:11:59] 2025-11-20 22:11:21,413 | INFO     | mean x: 1763654543.6137931
[2025-11-20 17:11:59] 2025-11-20 22:11:21,414 | INFO     | mean y: 3070626.688275862
[2025-11-20 17:11:59] 2025-11-20 22:11:21,414 | INFO     | intersect: -8789908918.599016
[2025-11-20 17:11:59] 2025-11-20 22:11:21,414 | INFO     | chi2: 3.259591703272222
[2025-11-20 17:11:59] 2025-11-20 22:11:21,415 | INFO     | current chi2=3.259591703272222 (change=1.5187058279703578 %)
[2025-11-20 17:11:59] 2025-11-20 22:11:21,415 | INFO     | left removable region: 20
[2025-11-20 17:11:59] 2025-11-20 22:11:21,416 | INFO     | sum of square deviations: 108192417999.0
[2025-11-20 17:11:59] 2025-11-20 22:11:21,426 | INFO     | sum of deviations: 864444853180.0002
[2025-11-20 17:11:59] 2025-11-20 22:11:21,426 | INFO     | mean x: 1763654513.125
[2025-11-20 17:11:59] 2025-11-20 22:11:21,426 | INFO     | mean y: 3094985.034090909
[2025-11-20 17:11:59] 2025-11-20 22:11:21,426 | INFO     | intersect: -14088299725.015526
[2025-11-20 17:11:59] 2025-11-20 22:11:21,427 | INFO     | chi2: 0.09009259033658981
[2025-11-20 17:11:59] 2025-11-20 22:11:21,427 | INFO     | current memory leak: 7.99 B/s (using 704 data points, chi2=0.09)
[2025-11-20 17:11:59] 2025-11-20 22:11:21,428 | INFO     | could have reported an average CPU frequency of 2169 MHz (28 samples)
[2025-11-20 17:11:59] 2025-11-20 22:11:21,428 | INFO     | ..............................
[2025-11-20 17:11:59] 2025-11-20 22:11:21,428 | INFO     | . Timing measurements:
[2025-11-20 17:11:59] 2025-11-20 22:11:21,429 | INFO     | . get job = 0 s
[2025-11-20 17:11:59] 2025-11-20 22:11:21,429 | INFO     | . initial setup = 2 s
[2025-11-20 17:11:59] 2025-11-20 22:11:21,429 | INFO     | . payload setup = 9 s
[2025-11-20 17:11:59] 2025-11-20 22:11:21,429 | INFO     | . stage-in = 0 s
[2025-11-20 17:11:59] 2025-11-20 22:11:21,429 | INFO     | . payload execution = 44819 s
[2025-11-20 17:11:59] 2025-11-20 22:11:21,429 | INFO     | . stage-out = 4 s
[2025-11-20 17:11:59] 2025-11-20 22:11:21,429 | INFO     | . log creation = 0 s
[2025-11-20 17:11:59] 2025-11-20 22:11:21,429 | INFO     | ..............................
[2025-11-20 17:11:59] 2025-11-20 22:11:21,520 | INFO     | 
[2025-11-20 17:11:59] 2025-11-20 22:11:21,520 | INFO     | job summary report
[2025-11-20 17:11:59] 2025-11-20 22:11:21,520 | INFO     | --------------------------------------------------
[2025-11-20 17:11:59] 2025-11-20 22:11:21,520 | INFO     | PanDA job id: 6891565703
[2025-11-20 17:11:59] 2025-11-20 22:11:21,521 | INFO     | task id: 47493068
[2025-11-20 17:11:59] 2025-11-20 22:11:21,521 | INFO     | errors: (none)
[2025-11-20 17:11:59] 2025-11-20 22:11:21,521 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 17:11:59] 2025-11-20 22:11:21,521 | INFO     | pilot state: finished 
[2025-11-20 17:11:59] 2025-11-20 22:11:21,521 | INFO     | transexitcode: 0
[2025-11-20 17:11:59] 2025-11-20 22:11:21,521 | INFO     | exeerrorcode: 0
[2025-11-20 17:11:59] 2025-11-20 22:11:21,521 | INFO     | exeerrordiag: 
[2025-11-20 17:11:59] 2025-11-20 22:11:21,521 | INFO     | exitcode: 0
[2025-11-20 17:11:59] 2025-11-20 22:11:21,521 | INFO     | exitmsg: OK
[2025-11-20 17:11:59] 2025-11-20 22:11:21,522 | INFO     | cpuconsumptiontime: 347386 s
[2025-11-20 17:11:59] 2025-11-20 22:11:21,522 | INFO     | nevents: 1000
[2025-11-20 17:11:59] 2025-11-20 22:11:21,522 | INFO     | neventsw: 0
[2025-11-20 17:11:59] 2025-11-20 22:11:21,522 | INFO     | pid: 4583
[2025-11-20 17:11:59] 2025-11-20 22:11:21,522 | INFO     | pgrp: 4583
[2025-11-20 17:11:59] 2025-11-20 22:11:21,522 | INFO     | corecount: 8
[2025-11-20 17:11:59] 2025-11-20 22:11:21,522 | INFO     | event service: False
[2025-11-20 17:11:59] 2025-11-20 22:11:21,522 | INFO     | sizes: {0: 2297194, 6: 2297456, 11: 2297484, 44832: 2343339, 44836: 2353929, 44837: 2353985, 44846: 2354359}
[2025-11-20 17:11:59] 2025-11-20 22:11:21,523 | INFO     | --------------------------------------------------
[2025-11-20 17:11:59] 2025-11-20 22:11:21,523 | INFO     | 
[2025-11-20 17:11:59] 2025-11-20 22:11:21,523 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-20 17:11:59] 2025-11-20 22:11:21,550 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 17:11:59] 2025-11-20 22:11:21,551 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 17:11:59] 2025-11-20 22:11:21,551 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 17:11:59] 2025-11-20 22:11:21,551 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 17:11:59] 2025-11-20 22:11:21,551 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 17:11:59] 2025-11-20 22:11:21,551 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 17:11:59] 2025-11-20 22:11:21,552 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 17:11:59] 2025-11-20 22:11:21,552 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 17:11:59] 2025-11-20 22:11:21,552 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 17:11:59] 2025-11-20 22:11:21,552 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 17:11:59] 2025-11-20 22:11:21,552 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 17:11:59] 2025-11-20 22:11:21,552 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 17:11:59] 2025-11-20 22:11:21,553 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 17:11:59] 2025-11-20 22:11:21,553 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 17:11:59] 2025-11-20 22:11:21,553 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 17:11:59] 2025-11-20 22:11:21,553 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 17:11:59] 2025-11-20 22:11:21,553 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 17:11:59] 2025-11-20 22:11:21,553 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 17:11:59] 2025-11-20 22:11:21,554 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 17:11:59] 2025-11-20 22:11:21,554 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 17:11:59] 2025-11-20 22:11:21,554 | INFO     | job 6891565703 has completed (purged errors)
[2025-11-20 17:11:59] 2025-11-20 22:11:21,554 | INFO     | overall cleanup function is called
[2025-11-20 17:11:59] 2025-11-20 22:11:22,570 | INFO     | --- collectZombieJob: --- 10, [4583]
[2025-11-20 17:11:59] 2025-11-20 22:11:22,571 | INFO     | zombie collector waiting for pid 4583
[2025-11-20 17:11:59] 2025-11-20 22:11:22,577 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 17:11:59] 2025-11-20 22:11:22,577 | INFO     | collected zombie processes
[2025-11-20 17:11:59] 2025-11-20 22:11:22,578 | INFO     | will attempt to kill all subprocesses of pid=4583
[2025-11-20 17:11:59] 2025-11-20 22:11:22,679 | INFO     | process IDs to be killed: [4583] (in reverse order)
[2025-11-20 17:11:59] 2025-11-20 22:11:22,724 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 17:11:59] 2025-11-20 22:11:22,725 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 17:11:59] 2025-11-20 22:11:22,730 | INFO     | did not find any defunct processes belonging to 4583
[2025-11-20 17:11:59] 2025-11-20 22:11:22,734 | INFO     | did not find any defunct processes belonging to 4583
[2025-11-20 17:11:59] 2025-11-20 22:11:22,737 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 17:11:59] 2025-11-20 22:11:22,738 | INFO     | ready for new job
[2025-11-20 17:11:59] 2025-11-20 22:11:22,738 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 17:11:59] 2025-11-20 22:11:22,742 | INFO     | ***************************************
[2025-11-20 17:11:59] 2025-11-20 22:11:22,742 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 17:11:59] 2025-11-20 22:11:22,743 | INFO     | ***************************************
[2025-11-20 17:11:59] 2025-11-20 22:11:22,743 | INFO     | 
[2025-11-20 17:11:59] 2025-11-20 22:11:22,743 | INFO     | architecture information:
[2025-11-20 17:11:59] 2025-11-20 22:11:22,744 | INFO     | executing command: cat /etc/os-release
[2025-11-20 17:11:59] 2025-11-20 22:11:22,764 | INFO     | cat /etc/os-release:
[2025-11-20 17:11:59] NAME="CentOS Linux"
[2025-11-20 17:11:59] VERSION="7 (Core)"
[2025-11-20 17:11:59] ID="centos"
[2025-11-20 17:11:59] ID_LIKE="rhel fedora"
[2025-11-20 17:11:59] VERSION_ID="7"
[2025-11-20 17:11:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 17:11:59] ANSI_COLOR="0;31"
[2025-11-20 17:11:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 17:11:59] HOME_URL="https://www.centos.org/"
[2025-11-20 17:11:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 17:11:59] 
[2025-11-20 17:11:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 17:11:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 17:11:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 17:11:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 17:11:59] 
[2025-11-20 17:11:59] 2025-11-20 22:11:22,764 | INFO     | ***************************************
[2025-11-20 17:11:59] 2025-11-20 22:11:23,268 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-20 17:11:59] 2025-11-20 22:11:23,288 | INFO     | sufficient remaining disk space (17469276160 B)
[2025-11-20 17:11:59] 2025-11-20 22:11:23,288 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 17:11:59] 2025-11-20 22:11:23,289 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 17:11:59] 2025-11-20 22:11:23,289 | INFO     | update_server=False
[2025-11-20 17:11:59] 2025-11-20 22:11:23,289 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 17:11:59] 2025-11-20 22:11:23,290 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-20 17:11:59] 2025-11-20 22:11:23,290 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 17:11:59] 2025-11-20 22:11:23,291 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 17:11:59] 2025-11-20 22:11:23,291 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 17:11:59] 2025-11-20 22:11:23,291 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 17:11:59] 2025-11-20 22:11:23,292 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 17:11:59] 2025-11-20 22:11:23,411 | INFO     | all payload control threads have been joined
[2025-11-20 17:11:59] 2025-11-20 22:11:23,436 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 17:11:59] 2025-11-20 22:11:23,436 | INFO     | aborting loop
[2025-11-20 17:11:59] 2025-11-20 22:11:23,753 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 17:11:59] 2025-11-20 22:11:24,106 | INFO     | all job control threads have been joined
[2025-11-20 17:11:59] 2025-11-20 22:11:24,243 | INFO     | all data control threads have been joined
[2025-11-20 17:11:59] 2025-11-20 22:11:24,295 | INFO     | [job] retrieve thread has finished
[2025-11-20 17:11:59] 2025-11-20 22:11:24,297 | INFO     | [job] queue monitor thread has finished
[2025-11-20 17:11:59] 2025-11-20 22:11:24,298 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 17:11:59] 2025-11-20 22:11:24,417 | INFO     | [payload] control thread has finished
[2025-11-20 17:11:59] 2025-11-20 22:11:24,442 | INFO     | [job] job monitor thread has finished
[2025-11-20 17:11:59] 2025-11-20 22:11:24,453 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 17:11:59] 2025-11-20 22:11:24,491 | INFO     | [payload] failed_post thread has finished
[2025-11-20 17:11:59] 2025-11-20 22:11:24,559 | INFO     | [job] validate thread has finished
[2025-11-20 17:11:59] 2025-11-20 22:11:24,755 | INFO     | [payload] validate_post thread has finished
[2025-11-20 17:11:59] 2025-11-20 22:11:24,968 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 17:11:59] 2025-11-20 22:11:25,112 | INFO     | [job] control thread has finished
[2025-11-20 17:11:59] 2025-11-20 22:11:25,249 | INFO     | [data] control thread has finished
[2025-11-20 17:11:59] 2025-11-20 22:11:25,297 | INFO     | [data] copytool_out thread has finished
[2025-11-20 17:11:59] 2025-11-20 22:11:25,564 | INFO     | [data] copytool_in thread has finished
[2025-11-20 17:11:59] 2025-11-20 22:11:25,656 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 17:11:59] 2025-11-20 22:11:27,759 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 17:11:59] 2025-11-20 22:11:52,486 | INFO     | [monitor] cgroup control has ended
[2025-11-20 17:11:59] 2025-11-20 22:11:53,973 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140198719821632)>', '<ExcThread(monitor, started 140197396215552)>']
[2025-11-20 17:11:59] 2025-11-20 22:11:54,450 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 17:11:59] 2025-11-20 22:11:54,450 | INFO     | [monitor] control thread has ended
[2025-11-20 17:11:59] 2025-11-20 22:11:58,974 | INFO     | all workflow threads have been joined
[2025-11-20 17:11:59] 2025-11-20 22:11:58,974 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 17:11:59] 2025-11-20 22:11:58,975 | INFO     | traces error code: 0
[2025-11-20 17:11:59] 2025-11-20 22:11:58,976 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 17:11:59] 2025-11-20 22:11:59,095 [wrapper] ==== pilot stdout END ====
[2025-11-20 17:11:59] 2025-11-20 22:11:59,100 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 17:11:59] 2025-11-20 22:11:59,105 [wrapper] pilotpid: 29624
[2025-11-20 17:11:59] 2025-11-20 22:11:59,110 [wrapper] Pilot exit status: 0
[2025-11-20 17:11:59] 2025-11-20 22:11:59,129 [wrapper] pandaids: 6891565703
[2025-11-20 17:11:59] 2025-11-20 22:11:59,174 [wrapper] cleanup supervisor_pilot 28870 29625
[2025-11-20 17:11:59] 2025-11-20 22:11:59,179 [wrapper] Test setup, not cleaning
[2025-11-20 17:11:59] 2025-11-20 22:11:59,183 [wrapper] apfmon messages muted
[2025-11-20 17:11:59] 2025-11-20 22:11:59,188 [wrapper] ==== wrapper stdout END ====
[2025-11-20 17:11:59] 2025-11-20 22:11:59,193 [wrapper] ==== wrapper stderr END ====
[2025-11-20 17:11:59]  *** Error codes and diagnostics ***
[2025-11-20 17:11:59]     "exeErrorCode": 0,
[2025-11-20 17:11:59]     "exeErrorDiag": "",
[2025-11-20 17:11:59]     "pilotErrorCode": 0,
[2025-11-20 17:11:59]     "pilotErrorDiag": "",
[2025-11-20 17:11:59]  *** Listing of results directory ***
[2025-11-20 17:11:59] total 1316656
[2025-11-20 17:11:59] -rw-r--r-- 1 boincer umatlas    576529 Nov 18 10:15 pilot3.tar.gz
[2025-11-20 17:11:59] -rw-r--r-- 1 boincer umatlas      5112 Nov 18 10:27 queuedata.json
[2025-11-20 17:11:59] -rwx------ 1 boincer umatlas     36292 Nov 18 10:27 runpilot2-wrapper.sh
[2025-11-20 17:11:59] -rw-r--r-- 1 boincer umatlas       100 Nov 20 04:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 17:11:59] -rwxr-xr-x 1 boincer umatlas      7986 Nov 20 04:43 run_atlas
[2025-11-20 17:11:59] -rw-r--r-- 1 boincer umatlas       105 Nov 20 04:43 job.xml
[2025-11-20 17:11:59] -rw-r--r-- 2 boincer umatlas 409480155 Nov 20 04:43 EVNT.47493065._000150.pool.root.1
[2025-11-20 17:11:59] -rw-r--r-- 2 boincer umatlas     15120 Nov 20 04:43 start_atlas.sh
[2025-11-20 17:11:59] drwxrwx--x 2 boincer umatlas      4096 Nov 20 04:43 shared
[2025-11-20 17:11:59] -rw-r--r-- 2 boincer umatlas    590105 Nov 20 04:43 input.tar.gz
[2025-11-20 17:11:59] -rw-r--r-- 1 boincer umatlas         0 Nov 20 04:43 boinc_lockfile
[2025-11-20 17:11:59] -rw-r--r-- 1 boincer umatlas      2770 Nov 20 04:43 pandaJob.out
[2025-11-20 17:11:59] -rw------- 1 boincer umatlas    989435 Nov 20 04:43 agis_schedconf.cvmfs.json
[2025-11-20 17:11:59] drwx------ 5 boincer umatlas      4096 Nov 20 04:43 pilot3
[2025-11-20 17:11:59] -rw-r--r-- 1 boincer umatlas       533 Nov 20 16:59 boinc_task_state.xml
[2025-11-20 17:11:59] -rw-r--r-- 1 boincer umatlas      5912 Nov 20 17:09 init_data.xml
[2025-11-20 17:11:59] -rw------- 1 boincer umatlas 918551338 Nov 20 17:10 HITS.47493068._001491.pool.root.1
[2025-11-20 17:11:59] -rw------- 1 boincer umatlas        95 Nov 20 17:10 pilot_heartbeat.json
[2025-11-20 17:11:59] -rw------- 1 boincer umatlas      1060 Nov 20 17:11 memory_monitor_summary.json
[2025-11-20 17:11:59] -rw------- 1 boincer umatlas   1526164 Nov 20 17:11 agis_ddmendpoints.agis.ALL.json
[2025-11-20 17:11:59] -rw------- 1 boincer umatlas   1989795 Nov 20 17:11 log.47493068._001491.job.log.tgz.1
[2025-11-20 17:11:59] -rw------- 1 boincer umatlas      8659 Nov 20 17:11 heartbeat.json
[2025-11-20 17:11:59] -rw-r--r-- 1 boincer umatlas      8192 Nov 20 17:11 boinc_mmap_file
[2025-11-20 17:11:59] -rw-r--r-- 1 boincer umatlas        29 Nov 20 17:11 wrapper_checkpoint.txt
[2025-11-20 17:11:59] -rw------- 1 boincer umatlas      4552 Nov 20 17:11 pilotlog.txt
[2025-11-20 17:11:59] -rw------- 1 boincer umatlas   6164558 Nov 20 17:11 log.47493068._001491.job.log.1
[2025-11-20 17:11:59] -rw------- 1 boincer umatlas       353 Nov 20 17:11 output.list
[2025-11-20 17:11:59] -rw-r--r-- 1 boincer umatlas       620 Nov 20 17:11 runtime_log
[2025-11-20 17:11:59] -rw------- 1 boincer umatlas   8171520 Nov 20 17:11 result.tar.gz
[2025-11-20 17:11:59] -rw------- 1 boincer umatlas       668 Nov 20 17:11 s42NDmYncf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmAEFKDm6NvY4m.diag
[2025-11-20 17:11:59] -rw-r--r-- 1 boincer umatlas      8704 Nov 20 17:11 runtime_log.err
[2025-11-20 17:11:59] -rw-r--r-- 1 boincer umatlas     21197 Nov 20 17:11 stderr.txt
[2025-11-20 17:11:59] HITS file was successfully produced:
[2025-11-20 17:11:59] -rw------- 1 boincer umatlas 918551338 Nov 20 17:10 shared/HITS.pool.root.1
[2025-11-20 17:11:59]  *** Contents of shared directory: ***
[2025-11-20 17:11:59] total 1305488
[2025-11-20 17:11:59] -rw-r--r-- 2 boincer umatlas 409480155 Nov 20 04:43 ATLAS.root_0
[2025-11-20 17:11:59] -rw-r--r-- 2 boincer umatlas     15120 Nov 20 04:43 start_atlas.sh
[2025-11-20 17:11:59] -rw-r--r-- 2 boincer umatlas    590105 Nov 20 04:43 input.tar.gz
[2025-11-20 17:11:59] -rw------- 1 boincer umatlas 918551338 Nov 20 17:10 HITS.pool.root.1
[2025-11-20 17:11:59] -rw------- 1 boincer umatlas   8171520 Nov 20 17:11 result.tar.gz
17:12:00 (25925): run_atlas exited; CPU time 344426.230300
17:12:00 (25925): called boinc_finish(0)

</stderr_txt>
]]>

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