Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:29:43 (4565): wrapper (7.7.26015): starting
04:29:43 (4565): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 04:29:43] Arguments: --nthreads 8
[2025-11-20 04:29:43] Threads: 8
[2025-11-20 04:29:43] Checking for CVMFS
[2025-11-20 04:29:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 04:29:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 04:29:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 04:29:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 04:29:44] 2.11.2.0 2822 64480 85540 153076 0 1 18248945 20275201 1 130560 0 17709532 99.852 3919152 33373 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 04:29:44] CVMFS is ok
[2025-11-20 04:29:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 04:29:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 04:29:44] Further information can be found at the LHC@home message board.
[2025-11-20 04:29:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 04:29:44] Checking for apptainer binary...
[2025-11-20 04:29:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 04:29:44] Running /usr/bin/apptainer --version
[2025-11-20 04:29:44] apptainer version 1.3.2-1.el7
[2025-11-20 04:29:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 04:29:46] c-204-37.aglt2.org
[2025-11-20 04:29:46] apptainer works
[2025-11-20 04:29:46] Set ATHENA_PROC_NUMBER=8
[2025-11-20 04:29:46] Set ATHENA_CORE_NUMBER=8
[2025-11-20 04:29:46] Starting ATLAS job with PandaID=6891564444
[2025-11-20 04:29:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 17:03:47]  *** The last 200 lines of the pilot log: ***
[2025-11-20 17:03:47] 2025-11-20 22:03:11,913 | INFO     | time since job start (45187s) is within the limit (172800.0s)
[2025-11-20 17:03:47] 2025-11-20 22:03:13,306 | INFO     | monitor loop #3295: job 0:6891564444 is in state 'finished'
[2025-11-20 17:03:47] 2025-11-20 22:03:13,307 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 17:03:47] 2025-11-20 22:03:13,919 | INFO     | time since job start (45189s) is within the limit (172800.0s)
[2025-11-20 17:03:47] 2025-11-20 22:03:14,072 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-20 17:03:47] 2025-11-20 22:03:14,075 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-11-20 17:03:47] 2025-11-20 22:03:14,077 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6891564444/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 17:03:47] 2025-11-20 22:03:14,078 | INFO     | extracted standard info from prmon json
[2025-11-20 17:03:47] 2025-11-20 22:03:14,078 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 17:03:47] 2025-11-20 22:03:14,078 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 17:03:47] 2025-11-20 22:03:14,090 | INFO     | fitting pss+swap vs Time
[2025-11-20 17:03:47] 2025-11-20 22:03:14,091 | INFO     | sum of square deviations: 125653500319.0542
[2025-11-20 17:03:47] 2025-11-20 22:03:14,102 | INFO     | sum of deviations: 791773619465.4188
[2025-11-20 17:03:47] 2025-11-20 22:03:14,102 | INFO     | mean x: 1763653577.1216216
[2025-11-20 17:03:47] 2025-11-20 22:03:14,102 | INFO     | mean y: 2865443.8175675673
[2025-11-20 17:03:47] 2025-11-20 22:03:14,103 | INFO     | intersect: -11110349649.235962
[2025-11-20 17:03:47] 2025-11-20 22:03:14,103 | INFO     | chi2: 5.489941494651905
[2025-11-20 17:03:47] 2025-11-20 22:03:14,104 | INFO     | sum of square deviations: 123123788532.1086
[2025-11-20 17:03:47] 2025-11-20 22:03:14,115 | INFO     | sum of deviations: 1024062068193.2733
[2025-11-20 17:03:47] 2025-11-20 22:03:14,116 | INFO     | mean x: 1763653424.6258504
[2025-11-20 17:03:47] 2025-11-20 22:03:14,116 | INFO     | mean y: 2879442.1646258505
[2025-11-20 17:03:47] 2025-11-20 22:03:14,116 | INFO     | intersect: -14666020817.73519
[2025-11-20 17:03:47] 2025-11-20 22:03:14,117 | INFO     | chi2: 2.590914054256741
[2025-11-20 17:03:47] 2025-11-20 22:03:14,117 | INFO     | current chi2=2.590914054256741 (change=52.806162747258554 %)
[2025-11-20 17:03:47] 2025-11-20 22:03:14,118 | INFO     | sum of square deviations: 120628263432.63713
[2025-11-20 17:03:47] 2025-11-20 22:03:14,129 | INFO     | sum of deviations: 1089078798464.2322
[2025-11-20 17:03:47] 2025-11-20 22:03:14,129 | INFO     | mean x: 1763653272.130137
[2025-11-20 17:03:47] 2025-11-20 22:03:14,129 | INFO     | mean y: 2883406.4712328766
[2025-11-20 17:03:47] 2025-11-20 22:03:14,129 | INFO     | intersect: -15920063105.907404
[2025-11-20 17:03:47] 2025-11-20 22:03:14,130 | INFO     | chi2: 2.218201110975651
[2025-11-20 17:03:47] 2025-11-20 22:03:14,130 | INFO     | current chi2=2.218201110975651 (change=14.385384288172027 %)
[2025-11-20 17:03:47] 2025-11-20 22:03:14,130 | INFO     | right removable region: 729
[2025-11-20 17:03:47] 2025-11-20 22:03:14,131 | INFO     | sum of square deviations: 123123507932.10858
[2025-11-20 17:03:47] 2025-11-20 22:03:14,142 | INFO     | sum of deviations: 597750228630.7277
[2025-11-20 17:03:47] 2025-11-20 22:03:14,142 | INFO     | mean x: 1763653729.6258504
[2025-11-20 17:03:47] 2025-11-20 22:03:14,142 | INFO     | mean y: 2877119.8353741495
[2025-11-20 17:03:47] 2025-11-20 22:03:14,142 | INFO     | intersect: -8559455433.998266
[2025-11-20 17:03:47] 2025-11-20 22:03:14,143 | INFO     | chi2: 3.4260189656049596
[2025-11-20 17:03:47] 2025-11-20 22:03:14,143 | INFO     | current chi2=3.4260189656049596 (change=37.59461792184018 %)
[2025-11-20 17:03:47] 2025-11-20 22:03:14,144 | INFO     | sum of square deviations: 120627702232.6371
[2025-11-20 17:03:47] 2025-11-20 22:03:14,155 | INFO     | sum of deviations: 555025032758.4176
[2025-11-20 17:03:47] 2025-11-20 22:03:14,155 | INFO     | mean x: 1763653882.130137
[2025-11-20 17:03:47] 2025-11-20 22:03:14,155 | INFO     | mean y: 2879729.1219178084
[2025-11-20 17:03:47] 2025-11-20 22:03:14,155 | INFO     | intersect: -8111939964.748911
[2025-11-20 17:03:47] 2025-11-20 22:03:14,156 | INFO     | chi2: 3.383206894522813
[2025-11-20 17:03:47] 2025-11-20 22:03:14,156 | INFO     | current chi2=3.383206894522813 (change=1.249615705924348 %)
[2025-11-20 17:03:47] 2025-11-20 22:03:14,156 | INFO     | left removable region: 20
[2025-11-20 17:03:47] 2025-11-20 22:03:14,157 | INFO     | sum of square deviations: 110514268439.28659
[2025-11-20 17:03:47] 2025-11-20 22:03:14,167 | INFO     | sum of deviations: 808517034143.7521
[2025-11-20 17:03:47] 2025-11-20 22:03:14,167 | INFO     | mean x: 1763653851.6403384
[2025-11-20 17:03:47] 2025-11-20 22:03:14,167 | INFO     | mean y: 2901570.700987306
[2025-11-20 17:03:47] 2025-11-20 22:03:14,168 | INFO     | intersect: -12899904569.375168
[2025-11-20 17:03:47] 2025-11-20 22:03:14,168 | INFO     | chi2: 0.06867378988707004
[2025-11-20 17:03:47] 2025-11-20 22:03:14,168 | INFO     | current memory leak: 7.32 B/s (using 709 data points, chi2=0.07)
[2025-11-20 17:03:47] 2025-11-20 22:03:14,169 | INFO     | could have reported an average CPU frequency of 2183 MHz (28 samples)
[2025-11-20 17:03:47] 2025-11-20 22:03:14,169 | INFO     | ..............................
[2025-11-20 17:03:47] 2025-11-20 22:03:14,169 | INFO     | . Timing measurements:
[2025-11-20 17:03:47] 2025-11-20 22:03:14,169 | INFO     | . get job = 0 s
[2025-11-20 17:03:47] 2025-11-20 22:03:14,169 | INFO     | . initial setup = 2 s
[2025-11-20 17:03:47] 2025-11-20 22:03:14,170 | INFO     | . payload setup = 9 s
[2025-11-20 17:03:47] 2025-11-20 22:03:14,170 | INFO     | . stage-in = 0 s
[2025-11-20 17:03:47] 2025-11-20 22:03:14,170 | INFO     | . payload execution = 45145 s
[2025-11-20 17:03:47] 2025-11-20 22:03:14,170 | INFO     | . stage-out = 4 s
[2025-11-20 17:03:47] 2025-11-20 22:03:14,170 | INFO     | . log creation = 0 s
[2025-11-20 17:03:47] 2025-11-20 22:03:14,170 | INFO     | ..............................
[2025-11-20 17:03:47] 2025-11-20 22:03:14,714 | INFO     | 
[2025-11-20 17:03:47] 2025-11-20 22:03:14,714 | INFO     | job summary report
[2025-11-20 17:03:47] 2025-11-20 22:03:14,717 | INFO     | --------------------------------------------------
[2025-11-20 17:03:47] 2025-11-20 22:03:14,717 | INFO     | PanDA job id: 6891564444
[2025-11-20 17:03:47] 2025-11-20 22:03:14,717 | INFO     | task id: 47493068
[2025-11-20 17:03:47] 2025-11-20 22:03:14,717 | INFO     | errors: (none)
[2025-11-20 17:03:47] 2025-11-20 22:03:14,718 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 17:03:47] 2025-11-20 22:03:14,718 | INFO     | pilot state: finished 
[2025-11-20 17:03:47] 2025-11-20 22:03:14,718 | INFO     | transexitcode: 0
[2025-11-20 17:03:47] 2025-11-20 22:03:14,718 | INFO     | exeerrorcode: 0
[2025-11-20 17:03:47] 2025-11-20 22:03:14,718 | INFO     | exeerrordiag: 
[2025-11-20 17:03:47] 2025-11-20 22:03:14,718 | INFO     | exitcode: 0
[2025-11-20 17:03:47] 2025-11-20 22:03:14,718 | INFO     | exitmsg: OK
[2025-11-20 17:03:47] 2025-11-20 22:03:14,719 | INFO     | cpuconsumptiontime: 351100 s
[2025-11-20 17:03:47] 2025-11-20 22:03:14,719 | INFO     | nevents: 1000
[2025-11-20 17:03:47] 2025-11-20 22:03:14,719 | INFO     | neventsw: 0
[2025-11-20 17:03:47] 2025-11-20 22:03:14,719 | INFO     | pid: 15962
[2025-11-20 17:03:47] 2025-11-20 22:03:14,719 | INFO     | pgrp: 15962
[2025-11-20 17:03:47] 2025-11-20 22:03:14,719 | INFO     | corecount: 8
[2025-11-20 17:03:47] 2025-11-20 22:03:14,720 | INFO     | event service: False
[2025-11-20 17:03:47] 2025-11-20 22:03:14,720 | INFO     | sizes: {0: 2297200, 6: 2297462, 11: 2297490, 45158: 2343433, 45163: 2354023, 45165: 2354079, 45172: 2354453}
[2025-11-20 17:03:47] 2025-11-20 22:03:14,720 | INFO     | --------------------------------------------------
[2025-11-20 17:03:47] 2025-11-20 22:03:14,720 | INFO     | 
[2025-11-20 17:03:47] 2025-11-20 22:03:14,720 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-20 17:03:47] 2025-11-20 22:03:14,750 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 17:03:47] 2025-11-20 22:03:14,750 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 17:03:47] 2025-11-20 22:03:14,751 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 17:03:47] 2025-11-20 22:03:14,751 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 17:03:47] 2025-11-20 22:03:14,751 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 17:03:47] 2025-11-20 22:03:14,751 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 17:03:47] 2025-11-20 22:03:14,751 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 17:03:47] 2025-11-20 22:03:14,752 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 17:03:47] 2025-11-20 22:03:14,752 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 17:03:47] 2025-11-20 22:03:14,752 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 17:03:47] 2025-11-20 22:03:14,752 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 17:03:47] 2025-11-20 22:03:14,752 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 17:03:47] 2025-11-20 22:03:14,752 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 17:03:47] 2025-11-20 22:03:14,753 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 17:03:47] 2025-11-20 22:03:14,753 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 17:03:47] 2025-11-20 22:03:14,753 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 17:03:47] 2025-11-20 22:03:14,753 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 17:03:47] 2025-11-20 22:03:14,753 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 17:03:47] 2025-11-20 22:03:14,754 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 17:03:47] 2025-11-20 22:03:14,754 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 17:03:47] 2025-11-20 22:03:14,754 | INFO     | job 6891564444 has completed (purged errors)
[2025-11-20 17:03:47] 2025-11-20 22:03:14,754 | INFO     | overall cleanup function is called
[2025-11-20 17:03:47] 2025-11-20 22:03:15,770 | INFO     | --- collectZombieJob: --- 10, [15962]
[2025-11-20 17:03:47] 2025-11-20 22:03:15,770 | INFO     | zombie collector waiting for pid 15962
[2025-11-20 17:03:47] 2025-11-20 22:03:15,770 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 17:03:47] 2025-11-20 22:03:15,770 | INFO     | collected zombie processes
[2025-11-20 17:03:47] 2025-11-20 22:03:15,771 | INFO     | will attempt to kill all subprocesses of pid=15962
[2025-11-20 17:03:47] 2025-11-20 22:03:15,864 | INFO     | process IDs to be killed: [15962] (in reverse order)
[2025-11-20 17:03:47] 2025-11-20 22:03:15,922 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 17:03:47] 2025-11-20 22:03:15,923 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 17:03:47] 2025-11-20 22:03:15,928 | INFO     | did not find any defunct processes belonging to 15962
[2025-11-20 17:03:47] 2025-11-20 22:03:15,931 | INFO     | did not find any defunct processes belonging to 15962
[2025-11-20 17:03:47] 2025-11-20 22:03:15,933 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 17:03:47] 2025-11-20 22:03:15,934 | INFO     | ready for new job
[2025-11-20 17:03:47] 2025-11-20 22:03:15,934 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 17:03:47] 2025-11-20 22:03:15,937 | INFO     | ***************************************
[2025-11-20 17:03:47] 2025-11-20 22:03:15,937 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 17:03:47] 2025-11-20 22:03:15,938 | INFO     | ***************************************
[2025-11-20 17:03:47] 2025-11-20 22:03:15,938 | INFO     | 
[2025-11-20 17:03:47] 2025-11-20 22:03:15,938 | INFO     | architecture information:
[2025-11-20 17:03:47] 2025-11-20 22:03:15,939 | INFO     | executing command: cat /etc/os-release
[2025-11-20 17:03:47] 2025-11-20 22:03:15,959 | INFO     | cat /etc/os-release:
[2025-11-20 17:03:47] NAME="CentOS Linux"
[2025-11-20 17:03:47] VERSION="7 (Core)"
[2025-11-20 17:03:47] ID="centos"
[2025-11-20 17:03:47] ID_LIKE="rhel fedora"
[2025-11-20 17:03:47] VERSION_ID="7"
[2025-11-20 17:03:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 17:03:47] ANSI_COLOR="0;31"
[2025-11-20 17:03:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 17:03:47] HOME_URL="https://www.centos.org/"
[2025-11-20 17:03:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 17:03:47] 
[2025-11-20 17:03:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 17:03:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 17:03:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 17:03:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 17:03:47] 
[2025-11-20 17:03:47] 2025-11-20 22:03:15,959 | INFO     | ***************************************
[2025-11-20 17:03:47] 2025-11-20 22:03:16,460 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-20 17:03:47] 2025-11-20 22:03:16,480 | INFO     | sufficient remaining disk space (17424187392 B)
[2025-11-20 17:03:47] 2025-11-20 22:03:16,481 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 17:03:47] 2025-11-20 22:03:16,481 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 17:03:47] 2025-11-20 22:03:16,481 | INFO     | update_server=False
[2025-11-20 17:03:47] 2025-11-20 22:03:16,481 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 17:03:47] 2025-11-20 22:03:16,482 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 17:03:47] 2025-11-20 22:03:16,715 | INFO     | all job control threads have been joined
[2025-11-20 17:03:47] 2025-11-20 22:03:16,816 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 17:03:47] 2025-11-20 22:03:16,816 | INFO     | aborting loop
[2025-11-20 17:03:47] 2025-11-20 22:03:17,135 | INFO     | all data control threads have been joined
[2025-11-20 17:03:47] 2025-11-20 22:03:17,269 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 17:03:47] 2025-11-20 22:03:17,487 | INFO     | [job] retrieve thread has finished
[2025-11-20 17:03:47] 2025-11-20 22:03:17,720 | INFO     | [job] control thread has finished
[2025-11-20 17:03:47] 2025-11-20 22:03:17,822 | INFO     | [job] job monitor thread has finished
[2025-11-20 17:03:47] 2025-11-20 22:03:17,851 | INFO     | [job] validate thread has finished
[2025-11-20 17:03:47] 2025-11-20 22:03:17,947 | INFO     | all payload control threads have been joined
[2025-11-20 17:03:47] 2025-11-20 22:03:18,061 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 17:03:47] 2025-11-20 22:03:18,072 | INFO     | [data] copytool_in thread has finished
[2025-11-20 17:03:47] 2025-11-20 22:03:18,141 | INFO     | [data] control thread has finished
[2025-11-20 17:03:47] 2025-11-20 22:03:18,202 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 17:03:47] 2025-11-20 22:03:18,240 | INFO     | [payload] failed_post thread has finished
[2025-11-20 17:03:47] 2025-11-20 22:03:18,488 | INFO     | [data] copytool_out thread has finished
[2025-11-20 17:03:47] 2025-11-20 22:03:18,798 | INFO     | [monitor] cgroup control has ended
[2025-11-20 17:03:47] 2025-11-20 22:03:18,857 | INFO     | [payload] validate_post thread has finished
[2025-11-20 17:03:47] 2025-11-20 22:03:18,871 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 17:03:47] 2025-11-20 22:03:18,874 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 17:03:47] 2025-11-20 22:03:18,953 | INFO     | [payload] control thread has finished
[2025-11-20 17:03:47] 2025-11-20 22:03:19,270 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 17:03:47] 2025-11-20 22:03:20,275 | INFO     | [job] queue monitor thread has finished
[2025-11-20 17:03:47] 2025-11-20 22:03:21,270 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 17:03:47] 2025-11-20 22:03:23,102 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140289562285888)>', '<ExcThread(monitor, started 140288974636800)>']
[2025-11-20 17:03:47] 2025-11-20 22:03:28,118 | INFO     | all workflow threads have been joined
[2025-11-20 17:03:47] 2025-11-20 22:03:28,118 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 17:03:47] 2025-11-20 22:03:28,118 | INFO     | traces error code: 0
[2025-11-20 17:03:47] 2025-11-20 22:03:28,119 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 17:03:47] 2025-11-20 22:03:47,119 | INFO     | PID=8480 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-20 17:03:47] 2025-11-20 22:03:47,120 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 17:03:47] 2025-11-20 22:03:47,120 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 17:03:47] 2025-11-20 22:03:47,120 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 17:03:47] 2025-11-20 22:03:47,120 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 17:03:47] 2025-11-20 22:03:47,120 | INFO     | [monitor] control thread has ended
[2025-11-20 17:03:47] 2025-11-20 22:03:47,230 [wrapper] ==== pilot stdout END ====
[2025-11-20 17:03:47] 2025-11-20 22:03:47,234 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 17:03:47] 2025-11-20 22:03:47,238 [wrapper] pilotpid: 8480
[2025-11-20 17:03:47] 2025-11-20 22:03:47,243 [wrapper] Pilot exit status: 0
[2025-11-20 17:03:47] 2025-11-20 22:03:47,260 [wrapper] pandaids: 6891564444
[2025-11-20 17:03:47] 2025-11-20 22:03:47,302 [wrapper] cleanup supervisor_pilot 15882 8481
[2025-11-20 17:03:47] 2025-11-20 22:03:47,307 [wrapper] Test setup, not cleaning
[2025-11-20 17:03:47] 2025-11-20 22:03:47,311 [wrapper] apfmon messages muted
[2025-11-20 17:03:47] 2025-11-20 22:03:47,317 [wrapper] ==== wrapper stdout END ====
[2025-11-20 17:03:47] 2025-11-20 22:03:47,321 [wrapper] ==== wrapper stderr END ====
[2025-11-20 17:03:47]  *** Error codes and diagnostics ***
[2025-11-20 17:03:47]     "exeErrorCode": 0,
[2025-11-20 17:03:47]     "exeErrorDiag": "",
[2025-11-20 17:03:47]     "pilotErrorCode": 0,
[2025-11-20 17:03:47]     "pilotErrorDiag": "",
[2025-11-20 17:03:47]  *** Listing of results directory ***
[2025-11-20 17:03:47] total 1322400
[2025-11-20 17:03:47] -rw-r--r-- 1 boincer umatlas    576529 Nov 18 10:15 pilot3.tar.gz
[2025-11-20 17:03:47] -rw-r--r-- 1 boincer umatlas      5112 Nov 18 10:29 queuedata.json
[2025-11-20 17:03:47] -rwx------ 1 boincer umatlas     36292 Nov 18 10:29 runpilot2-wrapper.sh
[2025-11-20 17:03:47] -rw-r--r-- 1 boincer umatlas       100 Nov 20 04:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 17:03:47] -rwxr-xr-x 1 boincer umatlas      7986 Nov 20 04:29 run_atlas
[2025-11-20 17:03:47] -rw-r--r-- 1 boincer umatlas       105 Nov 20 04:29 job.xml
[2025-11-20 17:03:47] -rw-r--r-- 2 boincer umatlas 412040309 Nov 20 04:29 EVNT.47493065._000119.pool.root.1
[2025-11-20 17:03:47] -rw-r--r-- 2 boincer umatlas     15120 Nov 20 04:29 start_atlas.sh
[2025-11-20 17:03:47] drwxrwx--x 2 boincer umatlas      4096 Nov 20 04:29 shared
[2025-11-20 17:03:47] -rw-r--r-- 2 boincer umatlas    590104 Nov 20 04:29 input.tar.gz
[2025-11-20 17:03:47] -rw-r--r-- 1 boincer umatlas         0 Nov 20 04:29 boinc_lockfile
[2025-11-20 17:03:47] -rw-r--r-- 1 boincer umatlas      2773 Nov 20 04:29 pandaJob.out
[2025-11-20 17:03:47] -rw------- 1 boincer umatlas    989435 Nov 20 04:30 agis_schedconf.cvmfs.json
[2025-11-20 17:03:47] drwx------ 5 boincer umatlas      4096 Nov 20 04:30 pilot3
[2025-11-20 17:03:47] -rw-r--r-- 1 boincer umatlas       533 Nov 20 16:51 boinc_task_state.xml
[2025-11-20 17:03:47] -rw-r--r-- 1 boincer umatlas      5912 Nov 20 16:57 init_data.xml
[2025-11-20 17:03:47] -rw------- 1 boincer umatlas 921836591 Nov 20 17:02 HITS.47493068._001186.pool.root.1
[2025-11-20 17:03:47] -rw------- 1 boincer umatlas      1062 Nov 20 17:02 memory_monitor_summary.json
[2025-11-20 17:03:47] -rw------- 1 boincer umatlas   1526164 Nov 20 17:03 agis_ddmendpoints.agis.ALL.json
[2025-11-20 17:03:47] -rw------- 1 boincer umatlas   1980721 Nov 20 17:03 log.47493068._001186.job.log.tgz.1
[2025-11-20 17:03:47] -rw------- 1 boincer umatlas      8660 Nov 20 17:03 heartbeat.json
[2025-11-20 17:03:47] -rw-r--r-- 1 boincer umatlas        29 Nov 20 17:03 wrapper_checkpoint.txt
[2025-11-20 17:03:47] -rw-r--r-- 1 boincer umatlas      8192 Nov 20 17:03 boinc_mmap_file
[2025-11-20 17:03:47] -rw------- 1 boincer umatlas        95 Nov 20 17:03 pilot_heartbeat.json
[2025-11-20 17:03:47] -rw------- 1 boincer umatlas       744 Nov 20 17:03 pilotlog.txt
[2025-11-20 17:03:47] -rw------- 1 boincer umatlas   6191067 Nov 20 17:03 log.47493068._001186.job.log.1
[2025-11-20 17:03:47] -rw------- 1 boincer umatlas       353 Nov 20 17:03 output.list
[2025-11-20 17:03:47] -rw-r--r-- 1 boincer umatlas       620 Nov 20 17:03 runtime_log
[2025-11-20 17:03:47] -rw------- 1 boincer umatlas   8192000 Nov 20 17:03 result.tar.gz
[2025-11-20 17:03:47] -rw-r--r-- 1 boincer umatlas      8704 Nov 20 17:03 runtime_log.err
[2025-11-20 17:03:47] -rw------- 1 boincer umatlas       668 Nov 20 17:03 NyDODmXpcf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmeFFKDmLFV96n.diag
[2025-11-20 17:03:47] -rw-r--r-- 1 boincer umatlas     21297 Nov 20 17:03 stderr.txt
[2025-11-20 17:03:47] HITS file was successfully produced:
[2025-11-20 17:03:47] -rw------- 1 boincer umatlas 921836591 Nov 20 17:02 shared/HITS.pool.root.1
[2025-11-20 17:03:47]  *** Contents of shared directory: ***
[2025-11-20 17:03:47] total 1311220
[2025-11-20 17:03:47] -rw-r--r-- 2 boincer umatlas 412040309 Nov 20 04:29 ATLAS.root_0
[2025-11-20 17:03:47] -rw-r--r-- 2 boincer umatlas     15120 Nov 20 04:29 start_atlas.sh
[2025-11-20 17:03:47] -rw-r--r-- 2 boincer umatlas    590104 Nov 20 04:29 input.tar.gz
[2025-11-20 17:03:47] -rw------- 1 boincer umatlas 921836591 Nov 20 17:02 HITS.pool.root.1
[2025-11-20 17:03:47] -rw------- 1 boincer umatlas   8192000 Nov 20 17:03 result.tar.gz
17:03:49 (4565): run_atlas exited; CPU time 348271.145574
17:03:49 (4565): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN