Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:47:54 (8037): wrapper (7.7.26015): starting
03:47:54 (8037): wrapper: running run_atlas (--nthreads 4)
[2025-11-20 03:47:54] Arguments: --nthreads 4
[2025-11-20 03:47:54] Threads: 4
[2025-11-20 03:47:54] Checking for CVMFS
[2025-11-20 03:47:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 03:47:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 03:47:55] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 03:47:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 03:47:55] 2.11.2.0 2311 98583 90568 153075 3 1 15839650 20275201 1 130560 0 37592846 99.937 4371622 43816 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 03:47:55] CVMFS is ok
[2025-11-20 03:47:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 03:47:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 03:47:55] Further information can be found at the LHC@home message board.
[2025-11-20 03:47:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 03:47:55] Checking for apptainer binary...
[2025-11-20 03:47:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 03:47:55] Running /usr/bin/apptainer --version
[2025-11-20 03:47:55] apptainer version 1.3.2-1.el7
[2025-11-20 03:47:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 03:47:55] c-205-34.aglt2.org
[2025-11-20 03:47:55] apptainer works
[2025-11-20 03:47:56] Set ATHENA_PROC_NUMBER=4
[2025-11-20 03:47:56] Set ATHENA_CORE_NUMBER=4
[2025-11-20 03:47:56] Starting ATLAS job with PandaID=6886167176
[2025-11-20 03:47:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 09:19:45]  *** The last 200 lines of the pilot log: ***
[2025-11-20 09:19:45] 2025-11-20 14:19:10,494 | INFO     | time since job start (19864s) is within the limit (172800.0s)
[2025-11-20 09:19:45] 2025-11-20 14:19:10,669 | INFO     | monitor loop #1488: job 0:6886167176 is in state 'finished'
[2025-11-20 09:19:45] 2025-11-20 14:19:10,669 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 09:19:45] 2025-11-20 14:19:12,009 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-20 09:19:45] 2025-11-20 14:19:12,010 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3300.4754999999996
[2025-11-20 09:19:45] 2025-11-20 14:19:12,011 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6886167176/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 09:19:45] 2025-11-20 14:19:12,011 | INFO     | extracted standard info from prmon json
[2025-11-20 09:19:45] 2025-11-20 14:19:12,011 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 09:19:45] 2025-11-20 14:19:12,011 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 09:19:45] 2025-11-20 14:19:12,014 | INFO     | fitting pss+swap vs Time
[2025-11-20 09:19:45] 2025-11-20 14:19:12,014 | INFO     | sum of square deviations: 10743038637.5
[2025-11-20 09:19:45] 2025-11-20 14:19:12,015 | INFO     | sum of deviations: 55747332456.000015
[2025-11-20 09:19:45] 2025-11-20 14:19:12,015 | INFO     | mean x: 1763638422.5
[2025-11-20 09:19:45] 2025-11-20 14:19:12,016 | INFO     | mean y: 2803452.8282208587
[2025-11-20 09:19:45] 2025-11-20 14:19:12,016 | INFO     | intersect: -9148996218.457558
[2025-11-20 09:19:45] 2025-11-20 14:19:12,016 | INFO     | chi2: 2.8015362590548047
[2025-11-20 09:19:45] 2025-11-20 14:19:12,016 | INFO     | sum of square deviations: 10256266720.0
[2025-11-20 09:19:45] 2025-11-20 14:19:12,017 | INFO     | sum of deviations: 107463066637.0
[2025-11-20 09:19:45] 2025-11-20 14:19:12,017 | INFO     | mean x: 1763638270.0
[2025-11-20 09:19:45] 2025-11-20 14:19:12,017 | INFO     | mean y: 2819507.5732087228
[2025-11-20 09:19:45] 2025-11-20 14:19:12,017 | INFO     | intersect: -18476221853.840744
[2025-11-20 09:19:45] 2025-11-20 14:19:12,018 | INFO     | chi2: 1.2102919811444595
[2025-11-20 09:19:45] 2025-11-20 14:19:12,018 | INFO     | current chi2=1.2102919811444595 (change=56.79898922483362 %)
[2025-11-20 09:19:45] 2025-11-20 14:19:12,018 | INFO     | sum of square deviations: 9784425315.0
[2025-11-20 09:19:45] 2025-11-20 14:19:12,019 | INFO     | sum of deviations: 104135130812.0
[2025-11-20 09:19:45] 2025-11-20 14:19:12,019 | INFO     | mean x: 1763638117.5
[2025-11-20 09:19:45] 2025-11-20 14:19:12,019 | INFO     | mean y: 2818432.075949367
[2025-11-20 09:19:45] 2025-11-20 14:19:12,019 | INFO     | intersect: -18767490518.960476
[2025-11-20 09:19:45] 2025-11-20 14:19:12,019 | INFO     | chi2: 1.210465374779448
[2025-11-20 09:19:45] 2025-11-20 14:19:12,020 | INFO     | current chi2=1.210465374779448 (change=-0.01432659537449974 %)
[2025-11-20 09:19:45] 2025-11-20 14:19:12,020 | INFO     | right removable region: 315
[2025-11-20 09:19:45] 2025-11-20 14:19:12,020 | INFO     | sum of square deviations: 10256266720.0
[2025-11-20 09:19:45] 2025-11-20 14:19:12,021 | INFO     | sum of deviations: 12219463330.999996
[2025-11-20 09:19:45] 2025-11-20 14:19:12,021 | INFO     | mean x: 1763638575.0
[2025-11-20 09:19:45] 2025-11-20 14:19:12,021 | INFO     | mean y: 2816965.1152647976
[2025-11-20 09:19:45] 2025-11-20 14:19:12,021 | INFO     | intersect: -2098407338.4927042
[2025-11-20 09:19:45] 2025-11-20 14:19:12,021 | INFO     | chi2: 1.6389708949974284
[2025-11-20 09:19:45] 2025-11-20 14:19:12,022 | INFO     | current chi2=1.6389708949974284 (change=41.497423433298984 %)
[2025-11-20 09:19:45] 2025-11-20 14:19:12,022 | INFO     | sum of square deviations: 9784425315.0
[2025-11-20 09:19:45] 2025-11-20 14:19:12,023 | INFO     | sum of deviations: 11433655566.5
[2025-11-20 09:19:45] 2025-11-20 14:19:12,023 | INFO     | mean x: 1763638727.5
[2025-11-20 09:19:45] 2025-11-20 14:19:12,023 | INFO     | mean y: 2817217.003164557
[2025-11-20 09:19:45] 2025-11-20 14:19:12,023 | INFO     | intersect: -2058094599.9700482
[2025-11-20 09:19:45] 2025-11-20 14:19:12,023 | INFO     | chi2: 1.638974016131883
[2025-11-20 09:19:45] 2025-11-20 14:19:12,023 | INFO     | current chi2=1.638974016131883 (change=-0.0001904325735247019 %)
[2025-11-20 09:19:45] 2025-11-20 14:19:12,023 | INFO     | left removable region: 20
[2025-11-20 09:19:45] 2025-11-20 14:19:12,024 | INFO     | sum of square deviations: 7960484140.0
[2025-11-20 09:19:45] 2025-11-20 14:19:12,025 | INFO     | sum of deviations: 60587477435.00003
[2025-11-20 09:19:45] 2025-11-20 14:19:12,025 | INFO     | mean x: 1763638697.0
[2025-11-20 09:19:45] 2025-11-20 14:19:12,025 | INFO     | mean y: 2832445.606779661
[2025-11-20 09:19:45] 2025-11-20 14:19:12,025 | INFO     | intersect: -13420273219.670052
[2025-11-20 09:19:45] 2025-11-20 14:19:12,025 | INFO     | chi2: 0.01748638613373211
[2025-11-20 09:19:45] 2025-11-20 14:19:12,025 | INFO     | current memory leak: 7.61 B/s (using 295 data points, chi2=0.02)
[2025-11-20 09:19:45] 2025-11-20 14:19:12,025 | INFO     | could have reported an average CPU frequency of 3284 MHz (14 samples)
[2025-11-20 09:19:45] 2025-11-20 14:19:12,025 | INFO     | ..............................
[2025-11-20 09:19:45] 2025-11-20 14:19:12,025 | INFO     | . Timing measurements:
[2025-11-20 09:19:45] 2025-11-20 14:19:12,025 | INFO     | . get job = 0 s
[2025-11-20 09:19:45] 2025-11-20 14:19:12,025 | INFO     | . initial setup = 2 s
[2025-11-20 09:19:45] 2025-11-20 14:19:12,025 | INFO     | . payload setup = 6 s
[2025-11-20 09:19:45] 2025-11-20 14:19:12,025 | INFO     | . stage-in = 0 s
[2025-11-20 09:19:45] 2025-11-20 14:19:12,025 | INFO     | . payload execution = 19833 s
[2025-11-20 09:19:45] 2025-11-20 14:19:12,026 | INFO     | . stage-out = 2 s
[2025-11-20 09:19:45] 2025-11-20 14:19:12,026 | INFO     | . log creation = 0 s
[2025-11-20 09:19:45] 2025-11-20 14:19:12,026 | INFO     | ..............................
[2025-11-20 09:19:45] 2025-11-20 14:19:12,063 | INFO     | 
[2025-11-20 09:19:45] 2025-11-20 14:19:12,063 | INFO     | job summary report
[2025-11-20 09:19:45] 2025-11-20 14:19:12,063 | INFO     | --------------------------------------------------
[2025-11-20 09:19:45] 2025-11-20 14:19:12,063 | INFO     | PanDA job id: 6886167176
[2025-11-20 09:19:45] 2025-11-20 14:19:12,063 | INFO     | task id: 47450870
[2025-11-20 09:19:45] 2025-11-20 14:19:12,063 | INFO     | errors: (none)
[2025-11-20 09:19:45] 2025-11-20 14:19:12,063 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 09:19:45] 2025-11-20 14:19:12,063 | INFO     | pilot state: finished 
[2025-11-20 09:19:45] 2025-11-20 14:19:12,063 | INFO     | transexitcode: 0
[2025-11-20 09:19:45] 2025-11-20 14:19:12,063 | INFO     | exeerrorcode: 0
[2025-11-20 09:19:45] 2025-11-20 14:19:12,063 | INFO     | exeerrordiag: 
[2025-11-20 09:19:45] 2025-11-20 14:19:12,063 | INFO     | exitcode: 0
[2025-11-20 09:19:45] 2025-11-20 14:19:12,063 | INFO     | exitmsg: OK
[2025-11-20 09:19:45] 2025-11-20 14:19:12,064 | INFO     | cpuconsumptiontime: 78056 s
[2025-11-20 09:19:45] 2025-11-20 14:19:12,064 | INFO     | nevents: 1000
[2025-11-20 09:19:45] 2025-11-20 14:19:12,064 | INFO     | neventsw: 0
[2025-11-20 09:19:45] 2025-11-20 14:19:12,064 | INFO     | pid: 19119
[2025-11-20 09:19:45] 2025-11-20 14:19:12,064 | INFO     | pgrp: 19119
[2025-11-20 09:19:45] 2025-11-20 14:19:12,064 | INFO     | corecount: 4
[2025-11-20 09:19:45] 2025-11-20 14:19:12,064 | INFO     | event service: False
[2025-11-20 09:19:45] 2025-11-20 14:19:12,064 | INFO     | sizes: {0: 2297409, 2: 2297671, 10: 2297699, 19844: 2350336, 19846: 2360982, 19852: 2361172}
[2025-11-20 09:19:45] 2025-11-20 14:19:12,064 | INFO     | --------------------------------------------------
[2025-11-20 09:19:45] 2025-11-20 14:19:12,064 | INFO     | 
[2025-11-20 09:19:45] 2025-11-20 14:19:12,064 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-20 09:19:45] 2025-11-20 14:19:12,075 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 09:19:45] 2025-11-20 14:19:12,076 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 09:19:45] 2025-11-20 14:19:12,076 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 09:19:45] 2025-11-20 14:19:12,076 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 09:19:45] 2025-11-20 14:19:12,076 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 09:19:45] 2025-11-20 14:19:12,076 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 09:19:45] 2025-11-20 14:19:12,076 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 09:19:45] 2025-11-20 14:19:12,076 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 09:19:45] 2025-11-20 14:19:12,076 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 09:19:45] 2025-11-20 14:19:12,076 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 09:19:45] 2025-11-20 14:19:12,076 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 09:19:45] 2025-11-20 14:19:12,076 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 09:19:45] 2025-11-20 14:19:12,076 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 09:19:45] 2025-11-20 14:19:12,076 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 09:19:45] 2025-11-20 14:19:12,076 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 09:19:45] 2025-11-20 14:19:12,076 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 09:19:45] 2025-11-20 14:19:12,076 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 09:19:45] 2025-11-20 14:19:12,077 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 09:19:45] 2025-11-20 14:19:12,077 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 09:19:45] 2025-11-20 14:19:12,077 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 09:19:45] 2025-11-20 14:19:12,077 | INFO     | job 6886167176 has completed (purged errors)
[2025-11-20 09:19:45] 2025-11-20 14:19:12,077 | INFO     | overall cleanup function is called
[2025-11-20 09:19:45] 2025-11-20 14:19:13,083 | INFO     | --- collectZombieJob: --- 10, [19119]
[2025-11-20 09:19:45] 2025-11-20 14:19:13,083 | INFO     | zombie collector waiting for pid 19119
[2025-11-20 09:19:45] 2025-11-20 14:19:13,083 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 09:19:45] 2025-11-20 14:19:13,083 | INFO     | collected zombie processes
[2025-11-20 09:19:45] 2025-11-20 14:19:13,083 | INFO     | will attempt to kill all subprocesses of pid=19119
[2025-11-20 09:19:45] 2025-11-20 14:19:13,132 | INFO     | process IDs to be killed: [19119] (in reverse order)
[2025-11-20 09:19:45] 2025-11-20 14:19:13,154 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 09:19:45] 2025-11-20 14:19:13,154 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 09:19:45] 2025-11-20 14:19:13,155 | INFO     | did not find any defunct processes belonging to 19119
[2025-11-20 09:19:45] 2025-11-20 14:19:13,156 | INFO     | did not find any defunct processes belonging to 19119
[2025-11-20 09:19:45] 2025-11-20 14:19:13,157 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 09:19:45] 2025-11-20 14:19:13,157 | INFO     | ready for new job
[2025-11-20 09:19:45] 2025-11-20 14:19:13,157 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 09:19:45] 2025-11-20 14:19:13,159 | INFO     | ***************************************
[2025-11-20 09:19:45] 2025-11-20 14:19:13,159 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 09:19:45] 2025-11-20 14:19:13,159 | INFO     | ***************************************
[2025-11-20 09:19:45] 2025-11-20 14:19:13,159 | INFO     | 
[2025-11-20 09:19:45] 2025-11-20 14:19:13,159 | INFO     | architecture information:
[2025-11-20 09:19:45] 2025-11-20 14:19:13,159 | INFO     | executing command: cat /etc/os-release
[2025-11-20 09:19:45] 2025-11-20 14:19:13,167 | INFO     | cat /etc/os-release:
[2025-11-20 09:19:45] NAME="CentOS Linux"
[2025-11-20 09:19:45] VERSION="7 (Core)"
[2025-11-20 09:19:45] ID="centos"
[2025-11-20 09:19:45] ID_LIKE="rhel fedora"
[2025-11-20 09:19:45] VERSION_ID="7"
[2025-11-20 09:19:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 09:19:45] ANSI_COLOR="0;31"
[2025-11-20 09:19:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 09:19:45] HOME_URL="https://www.centos.org/"
[2025-11-20 09:19:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 09:19:45] 
[2025-11-20 09:19:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 09:19:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 09:19:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 09:19:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 09:19:45] 
[2025-11-20 09:19:45] 2025-11-20 14:19:13,167 | INFO     | ***************************************
[2025-11-20 09:19:45] 2025-11-20 14:19:13,670 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-20 09:19:45] 2025-11-20 14:19:13,685 | INFO     | sufficient remaining disk space (28682747904 B)
[2025-11-20 09:19:45] 2025-11-20 14:19:13,686 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 09:19:45] 2025-11-20 14:19:13,686 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 09:19:45] 2025-11-20 14:19:13,686 | INFO     | update_server=False
[2025-11-20 09:19:45] 2025-11-20 14:19:13,686 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 09:19:45] 2025-11-20 14:19:13,687 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 09:19:45] 2025-11-20 14:19:13,687 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 09:19:45] 2025-11-20 14:19:14,174 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 09:19:45] 2025-11-20 14:19:14,175 | INFO     | aborting loop
[2025-11-20 09:19:45] 2025-11-20 14:19:14,230 | INFO     | all payload control threads have been joined
[2025-11-20 09:19:45] 2025-11-20 14:19:14,442 | INFO     | all job control threads have been joined
[2025-11-20 09:19:45] 2025-11-20 14:19:14,692 | INFO     | [job] retrieve thread has finished
[2025-11-20 09:19:45] 2025-11-20 14:19:14,692 | INFO     | [job] queue monitor thread has finished
[2025-11-20 09:19:45] 2025-11-20 14:19:14,716 | INFO     | all data control threads have been joined
[2025-11-20 09:19:45] 2025-11-20 14:19:14,749 | INFO     | [data] copytool_in thread has finished
[2025-11-20 09:19:45] 2025-11-20 14:19:14,861 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 09:19:45] 2025-11-20 14:19:15,180 | INFO     | [job] job monitor thread has finished
[2025-11-20 09:19:45] 2025-11-20 14:19:15,236 | INFO     | [payload] control thread has finished
[2025-11-20 09:19:45] 2025-11-20 14:19:15,252 | INFO     | [job] validate thread has finished
[2025-11-20 09:19:45] 2025-11-20 14:19:15,252 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 09:19:45] 2025-11-20 14:19:15,263 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 09:19:45] 2025-11-20 14:19:15,398 | INFO     | [payload] failed_post thread has finished
[2025-11-20 09:19:45] 2025-11-20 14:19:15,448 | INFO     | [job] control thread has finished
[2025-11-20 09:19:45] 2025-11-20 14:19:15,601 | INFO     | [payload] validate_post thread has finished
[2025-11-20 09:19:45] 2025-11-20 14:19:15,692 | INFO     | [data] copytool_out thread has finished
[2025-11-20 09:19:45] 2025-11-20 14:19:15,721 | INFO     | [data] control thread has finished
[2025-11-20 09:19:45] 2025-11-20 14:19:16,179 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 09:19:45] 2025-11-20 14:19:20,185 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 09:19:45] 2025-11-20 14:19:24,013 | INFO     | job.realtimelogging is not enabled
[2025-11-20 09:19:45] 2025-11-20 14:19:25,018 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 09:19:45] 2025-11-20 14:19:39,063 | INFO     | [monitor] cgroup control has ended
[2025-11-20 09:19:45] 2025-11-20 14:19:40,582 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139832151656256)>', '<ExcThread(monitor, started 139831116035840)>']
[2025-11-20 09:19:45] 2025-11-20 14:19:43,608 | INFO     | PID=12100 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-20 09:19:45] 2025-11-20 14:19:43,609 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 09:19:45] 2025-11-20 14:19:43,609 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 09:19:45] 2025-11-20 14:19:43,609 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 09:19:45] 2025-11-20 14:19:43,609 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 09:19:45] 2025-11-20 14:19:43,609 | INFO     | [monitor] control thread has ended
[2025-11-20 09:19:45] 2025-11-20 14:19:45,607 | INFO     | all workflow threads have been joined
[2025-11-20 09:19:45] 2025-11-20 14:19:45,607 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 09:19:45] 2025-11-20 14:19:45,608 | INFO     | traces error code: 0
[2025-11-20 09:19:45] 2025-11-20 14:19:45,608 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 09:19:45] 2025-11-20 14:19:45,666 [wrapper] ==== pilot stdout END ====
[2025-11-20 09:19:45] 2025-11-20 14:19:45,668 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 09:19:45] 2025-11-20 14:19:45,670 [wrapper] pilotpid: 12100
[2025-11-20 09:19:45] 2025-11-20 14:19:45,672 [wrapper] Pilot exit status: 0
[2025-11-20 09:19:45] 2025-11-20 14:19:45,678 [wrapper] pandaids: 6886167176
[2025-11-20 09:19:45] 2025-11-20 14:19:45,693 [wrapper] cleanup supervisor_pilot 28466 12101
[2025-11-20 09:19:45] 2025-11-20 14:19:45,695 [wrapper] Test setup, not cleaning
[2025-11-20 09:19:45] 2025-11-20 14:19:45,697 [wrapper] apfmon messages muted
[2025-11-20 09:19:45] 2025-11-20 14:19:45,699 [wrapper] ==== wrapper stdout END ====
[2025-11-20 09:19:45] 2025-11-20 14:19:45,701 [wrapper] ==== wrapper stderr END ====
[2025-11-20 09:19:45]  *** Error codes and diagnostics ***
[2025-11-20 09:19:45]     "exeErrorCode": 0,
[2025-11-20 09:19:45]     "exeErrorDiag": "",
[2025-11-20 09:19:45]     "pilotErrorCode": 0,
[2025-11-20 09:19:45]     "pilotErrorDiag": "",
[2025-11-20 09:19:45]  *** Listing of results directory ***
[2025-11-20 09:19:45] total 918788
[2025-11-20 09:19:45] -rw-r--r-- 1 boincer umatlas    576529 Nov 14 09:24 pilot3.tar.gz
[2025-11-20 09:19:45] -rwx------ 1 boincer umatlas     36292 Nov 14 09:33 runpilot2-wrapper.sh
[2025-11-20 09:19:45] -rw-r--r-- 1 boincer umatlas      5112 Nov 14 09:33 queuedata.json
[2025-11-20 09:19:45] -rw-r--r-- 1 boincer umatlas       100 Nov 20 03:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 09:19:45] -rwxr-xr-x 1 boincer umatlas      7986 Nov 20 03:47 run_atlas
[2025-11-20 09:19:45] -rw-r--r-- 1 boincer umatlas       105 Nov 20 03:47 job.xml
[2025-11-20 09:19:45] -rw-r--r-- 2 boincer umatlas 378844641 Nov 20 03:47 EVNT.14545720._000123.pool.root.1
[2025-11-20 09:19:45] -rw-r--r-- 2 boincer umatlas     15120 Nov 20 03:47 start_atlas.sh
[2025-11-20 09:19:45] drwxrwx--x 2 boincer umatlas      4096 Nov 20 03:47 shared
[2025-11-20 09:19:45] -rw-r--r-- 2 boincer umatlas    590124 Nov 20 03:47 input.tar.gz
[2025-11-20 09:19:45] -rw-r--r-- 1 boincer umatlas         0 Nov 20 03:47 boinc_lockfile
[2025-11-20 09:19:45] -rw-r--r-- 1 boincer umatlas      2930 Nov 20 03:47 pandaJob.out
[2025-11-20 09:19:45] -rw------- 1 boincer umatlas    989443 Nov 20 03:48 agis_schedconf.cvmfs.json
[2025-11-20 09:19:45] drwx------ 5 boincer umatlas      4096 Nov 20 03:48 pilot3
[2025-11-20 09:19:45] -rw-r--r-- 1 boincer umatlas       532 Nov 20 09:16 boinc_task_state.xml
[2025-11-20 09:19:45] -rw-r--r-- 1 boincer umatlas      6239 Nov 20 09:18 init_data.xml
[2025-11-20 09:19:45] -rw------- 1 boincer umatlas 549982047 Nov 20 09:18 HITS.47450870._001043.pool.root.1
[2025-11-20 09:19:45] -rw------- 1 boincer umatlas      1045 Nov 20 09:19 memory_monitor_summary.json
[2025-11-20 09:19:45] -rw------- 1 boincer umatlas   1526164 Nov 20 09:19 agis_ddmendpoints.agis.ALL.json
[2025-11-20 09:19:45] -rw------- 1 boincer umatlas   1251074 Nov 20 09:19 log.47450870._001043.job.log.tgz.1
[2025-11-20 09:19:45] -rw------- 1 boincer umatlas     27077 Nov 20 09:19 heartbeat.json
[2025-11-20 09:19:45] -rw-r--r-- 1 boincer umatlas      8192 Nov 20 09:19 boinc_mmap_file
[2025-11-20 09:19:45] -rw-r--r-- 1 boincer umatlas        28 Nov 20 09:19 wrapper_checkpoint.txt
[2025-11-20 09:19:45] -rw------- 1 boincer umatlas        95 Nov 20 09:19 pilot_heartbeat.json
[2025-11-20 09:19:45] -rw------- 1 boincer umatlas      4818 Nov 20 09:19 pilotlog.txt
[2025-11-20 09:19:45] -rw------- 1 boincer umatlas   2777846 Nov 20 09:19 log.47450870._001043.job.log.1
[2025-11-20 09:19:45] -rw------- 1 boincer umatlas       353 Nov 20 09:19 output.list
[2025-11-20 09:19:45] -rw-r--r-- 1 boincer umatlas       620 Nov 20 09:19 runtime_log
[2025-11-20 09:19:45] -rw------- 1 boincer umatlas   4065280 Nov 20 09:19 result.tar.gz
[2025-11-20 09:19:45] -rw------- 1 boincer umatlas       664 Nov 20 09:19 Uj3NDmm29d8n9Rq4apOajLDm4fhM0noT9bVof3QYDmTnqMDmDSqcen.diag
[2025-11-20 09:19:45] -rw-r--r-- 1 boincer umatlas      8704 Nov 20 09:19 runtime_log.err
[2025-11-20 09:19:45] -rw-r--r-- 1 boincer umatlas     21201 Nov 20 09:19 stderr.txt
[2025-11-20 09:19:45] HITS file was successfully produced:
[2025-11-20 09:19:45] -rw------- 1 boincer umatlas 549982047 Nov 20 09:18 shared/HITS.pool.root.1
[2025-11-20 09:19:45]  *** Contents of shared directory: ***
[2025-11-20 09:19:45] total 911632
[2025-11-20 09:19:45] -rw-r--r-- 2 boincer umatlas 378844641 Nov 20 03:47 ATLAS.root_0
[2025-11-20 09:19:45] -rw-r--r-- 2 boincer umatlas     15120 Nov 20 03:47 start_atlas.sh
[2025-11-20 09:19:45] -rw-r--r-- 2 boincer umatlas    590124 Nov 20 03:47 input.tar.gz
[2025-11-20 09:19:45] -rw------- 1 boincer umatlas 549982047 Nov 20 09:18 HITS.pool.root.1
[2025-11-20 09:19:45] -rw------- 1 boincer umatlas   4065280 Nov 20 09:19 result.tar.gz
09:19:47 (8037): run_atlas exited; CPU time 78020.437925
09:19:47 (8037): called boinc_finish(0)

</stderr_txt>
]]>

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