Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:40:59 (25324): wrapper (7.7.26015): starting
03:40:59 (25324): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 03:40:59] Arguments: --nthreads 8
[2025-11-20 03:40:59] Threads: 8
[2025-11-20 03:40:59] Checking for CVMFS
[2025-11-20 03:40:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 03:40:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 03:40:59] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 03:40:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 03:40:59] 2.11.2.0 2856 135852 86976 153075 1 1 16706506 20275200 1 130560 0 50050706 99.952 5447457 36179 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 03:40:59] CVMFS is ok
[2025-11-20 03:40:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 03:40:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 03:40:59] Further information can be found at the LHC@home message board.
[2025-11-20 03:40:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 03:40:59] Checking for apptainer binary...
[2025-11-20 03:40:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 03:40:59] Running /usr/bin/apptainer --version
[2025-11-20 03:40:59] apptainer version 1.3.2-1.el7
[2025-11-20 03:40:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 03:41:01] c-115-6.aglt2.org
[2025-11-20 03:41:01] apptainer works
[2025-11-20 03:41:01] Set ATHENA_PROC_NUMBER=8
[2025-11-20 03:41:01] Set ATHENA_CORE_NUMBER=8
[2025-11-20 03:41:01] Starting ATLAS job with PandaID=6891558287
[2025-11-20 03:41:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 15:15:34]  *** The last 200 lines of the pilot log: ***
[2025-11-20 15:15:34] 2025-11-20 20:14:57,134 | INFO     | PID=29128 has CPU usage=12.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-20 15:15:34] 2025-11-20 20:14:58,135 | INFO     | time since job start (41618s) is within the limit (172800.0s)
[2025-11-20 15:15:34] 2025-11-20 20:14:58,309 | INFO     | monitor loop #3069: job 0:6891558287 is in state 'finished'
[2025-11-20 15:15:34] 2025-11-20 20:14:58,310 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 15:15:34] 2025-11-20 20:14:59,856 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-20 15:15:34] 2025-11-20 20:14:59,859 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-11-20 15:15:34] 2025-11-20 20:14:59,861 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6891558287/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 15:15:34] 2025-11-20 20:14:59,863 | INFO     | extracted standard info from prmon json
[2025-11-20 15:15:34] 2025-11-20 20:14:59,863 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 15:15:34] 2025-11-20 20:14:59,863 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 15:15:34] 2025-11-20 20:14:59,875 | INFO     | fitting pss+swap vs Time
[2025-11-20 15:15:34] 2025-11-20 20:14:59,876 | INFO     | sum of square deviations: 98362455116.36304
[2025-11-20 15:15:34] 2025-11-20 20:14:59,885 | INFO     | sum of deviations: 653675154264.999
[2025-11-20 15:15:34] 2025-11-20 20:14:59,885 | INFO     | mean x: 1763648883.090909
[2025-11-20 15:15:34] 2025-11-20 20:14:59,885 | INFO     | mean y: 3159171.14516129
[2025-11-20 15:15:34] 2025-11-20 20:14:59,885 | INFO     | intersect: -11717303218.289045
[2025-11-20 15:15:34] 2025-11-20 20:14:59,886 | INFO     | chi2: 6.023817894844049
[2025-11-20 15:15:34] 2025-11-20 20:14:59,887 | INFO     | sum of square deviations: 96214993577.10503
[2025-11-20 15:15:34] 2025-11-20 20:14:59,895 | INFO     | sum of deviations: 900131466689.3147
[2025-11-20 15:15:34] 2025-11-20 20:14:59,896 | INFO     | mean x: 1763648730.5952733
[2025-11-20 15:15:34] 2025-11-20 20:14:59,896 | INFO     | mean y: 3176659.785819793
[2025-11-20 15:15:34] 2025-11-20 20:14:59,896 | INFO     | intersect: -16496494125.134659
[2025-11-20 15:15:34] 2025-11-20 20:14:59,896 | INFO     | chi2: 2.9100648754484
[2025-11-20 15:15:34] 2025-11-20 20:14:59,897 | INFO     | current chi2=2.9100648754484 (change=51.690689754429584 %)
[2025-11-20 15:15:34] 2025-11-20 20:14:59,897 | INFO     | sum of square deviations: 94099021000.3199
[2025-11-20 15:15:34] 2025-11-20 20:14:59,906 | INFO     | sum of deviations: 997699491361.2015
[2025-11-20 15:15:34] 2025-11-20 20:14:59,906 | INFO     | mean x: 1763648578.0997024
[2025-11-20 15:15:34] 2025-11-20 20:14:59,906 | INFO     | mean y: 3183677.011904762
[2025-11-20 15:15:34] 2025-11-20 20:14:59,906 | INFO     | intersect: -18696174409.869755
[2025-11-20 15:15:34] 2025-11-20 20:14:59,907 | INFO     | chi2: 2.229496503018468
[2025-11-20 15:15:34] 2025-11-20 20:14:59,907 | INFO     | current chi2=2.229496503018468 (change=23.38670791059482 %)
[2025-11-20 15:15:34] 2025-11-20 20:14:59,907 | INFO     | right removable region: 671
[2025-11-20 15:15:34] 2025-11-20 20:14:59,908 | INFO     | sum of square deviations: 96214747747.105
[2025-11-20 15:15:34] 2025-11-20 20:14:59,917 | INFO     | sum of deviations: 455636307907.3615
[2025-11-20 15:15:34] 2025-11-20 20:14:59,917 | INFO     | mean x: 1763649035.5952733
[2025-11-20 15:15:34] 2025-11-20 20:14:59,917 | INFO     | mean y: 3173207.862629247
[2025-11-20 15:15:34] 2025-11-20 20:14:59,917 | INFO     | intersect: -8348795215.26498
[2025-11-20 15:15:34] 2025-11-20 20:14:59,918 | INFO     | chi2: 3.9174994095063784
[2025-11-20 15:15:34] 2025-11-20 20:14:59,918 | INFO     | current chi2=3.9174994095063784 (change=34.96650333902899 %)
[2025-11-20 15:15:34] 2025-11-20 20:14:59,918 | INFO     | sum of square deviations: 94098652865.90456
[2025-11-20 15:15:34] 2025-11-20 20:14:59,927 | INFO     | sum of deviations: 418116736099.81
[2025-11-20 15:15:34] 2025-11-20 20:14:59,928 | INFO     | mean x: 1763649188.0952382
[2025-11-20 15:15:34] 2025-11-20 20:14:59,928 | INFO     | mean y: 3175910.2529761903
[2025-11-20 15:15:34] 2025-11-20 20:14:59,928 | INFO     | intersect: -7833400062.862281
[2025-11-20 15:15:34] 2025-11-20 20:14:59,929 | INFO     | chi2: 3.88728881295883
[2025-11-20 15:15:34] 2025-11-20 20:14:59,929 | INFO     | current chi2=3.88728881295883 (change=0.7711704173901893 %)
[2025-11-20 15:15:34] 2025-11-20 20:14:59,929 | INFO     | left removable region: 20
[2025-11-20 15:15:34] 2025-11-20 20:14:59,930 | INFO     | sum of square deviations: 85549889477.75111
[2025-11-20 15:15:34] 2025-11-20 20:14:59,938 | INFO     | sum of deviations: 716534663434.5208
[2025-11-20 15:15:34] 2025-11-20 20:14:59,938 | INFO     | mean x: 1763649157.6036866
[2025-11-20 15:15:34] 2025-11-20 20:14:59,938 | INFO     | mean y: 3204007.866359447
[2025-11-20 15:15:34] 2025-11-20 20:14:59,938 | INFO     | intersect: -14768477911.007269
[2025-11-20 15:15:34] 2025-11-20 20:14:59,939 | INFO     | chi2: 0.06245451990737362
[2025-11-20 15:15:34] 2025-11-20 20:14:59,939 | INFO     | current memory leak: 8.38 B/s (using 651 data points, chi2=0.06)
[2025-11-20 15:15:34] 2025-11-20 20:14:59,940 | INFO     | could have reported an average CPU frequency of 2383 MHz (26 samples)
[2025-11-20 15:15:34] 2025-11-20 20:14:59,940 | INFO     | ..............................
[2025-11-20 15:15:34] 2025-11-20 20:14:59,940 | INFO     | . Timing measurements:
[2025-11-20 15:15:34] 2025-11-20 20:14:59,940 | INFO     | . get job = 0 s
[2025-11-20 15:15:34] 2025-11-20 20:14:59,940 | INFO     | . initial setup = 2 s
[2025-11-20 15:15:34] 2025-11-20 20:14:59,941 | INFO     | . payload setup = 9 s
[2025-11-20 15:15:34] 2025-11-20 20:14:59,941 | INFO     | . stage-in = 0 s
[2025-11-20 15:15:34] 2025-11-20 20:14:59,941 | INFO     | . payload execution = 41574 s
[2025-11-20 15:15:34] 2025-11-20 20:14:59,941 | INFO     | . stage-out = 3 s
[2025-11-20 15:15:34] 2025-11-20 20:14:59,941 | INFO     | . log creation = 0 s
[2025-11-20 15:15:34] 2025-11-20 20:14:59,941 | INFO     | ..............................
[2025-11-20 15:15:34] 2025-11-20 20:15:00,025 | INFO     | 
[2025-11-20 15:15:34] 2025-11-20 20:15:00,026 | INFO     | job summary report
[2025-11-20 15:15:34] 2025-11-20 20:15:00,026 | INFO     | --------------------------------------------------
[2025-11-20 15:15:34] 2025-11-20 20:15:00,026 | INFO     | PanDA job id: 6891558287
[2025-11-20 15:15:34] 2025-11-20 20:15:00,026 | INFO     | task id: 47493068
[2025-11-20 15:15:34] 2025-11-20 20:15:00,026 | INFO     | errors: (none)
[2025-11-20 15:15:34] 2025-11-20 20:15:00,026 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 15:15:34] 2025-11-20 20:15:00,026 | INFO     | pilot state: finished 
[2025-11-20 15:15:34] 2025-11-20 20:15:00,027 | INFO     | transexitcode: 0
[2025-11-20 15:15:34] 2025-11-20 20:15:00,027 | INFO     | exeerrorcode: 0
[2025-11-20 15:15:34] 2025-11-20 20:15:00,027 | INFO     | exeerrordiag: 
[2025-11-20 15:15:34] 2025-11-20 20:15:00,027 | INFO     | exitcode: 0
[2025-11-20 15:15:34] 2025-11-20 20:15:00,027 | INFO     | exitmsg: OK
[2025-11-20 15:15:34] 2025-11-20 20:15:00,027 | INFO     | cpuconsumptiontime: 322952 s
[2025-11-20 15:15:34] 2025-11-20 20:15:00,027 | INFO     | nevents: 1000
[2025-11-20 15:15:34] 2025-11-20 20:15:00,027 | INFO     | neventsw: 0
[2025-11-20 15:15:34] 2025-11-20 20:15:00,027 | INFO     | pid: 3241
[2025-11-20 15:15:34] 2025-11-20 20:15:00,028 | INFO     | pgrp: 3241
[2025-11-20 15:15:34] 2025-11-20 20:15:00,028 | INFO     | corecount: 8
[2025-11-20 15:15:34] 2025-11-20 20:15:00,028 | INFO     | event service: False
[2025-11-20 15:15:34] 2025-11-20 20:15:00,028 | INFO     | sizes: {0: 2297025, 1: 2297224, 7: 2297486, 12: 2297514, 41587: 2341682, 41588: 2341681, 41592: 2352455, 41595: 2352511, 41603: 2352757}
[2025-11-20 15:15:34] 2025-11-20 20:15:00,028 | INFO     | --------------------------------------------------
[2025-11-20 15:15:34] 2025-11-20 20:15:00,028 | INFO     | 
[2025-11-20 15:15:34] 2025-11-20 20:15:00,028 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-20 15:15:34] 2025-11-20 20:15:00,058 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 15:15:34] 2025-11-20 20:15:00,059 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 15:15:34] 2025-11-20 20:15:00,059 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 15:15:34] 2025-11-20 20:15:00,059 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 15:15:34] 2025-11-20 20:15:00,059 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 15:15:34] 2025-11-20 20:15:00,060 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 15:15:34] 2025-11-20 20:15:00,060 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 15:15:34] 2025-11-20 20:15:00,060 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 15:15:34] 2025-11-20 20:15:00,060 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 15:15:34] 2025-11-20 20:15:00,060 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 15:15:34] 2025-11-20 20:15:00,060 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 15:15:34] 2025-11-20 20:15:00,060 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 15:15:34] 2025-11-20 20:15:00,061 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 15:15:34] 2025-11-20 20:15:00,061 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 15:15:34] 2025-11-20 20:15:00,061 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 15:15:34] 2025-11-20 20:15:00,061 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 15:15:34] 2025-11-20 20:15:00,061 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 15:15:34] 2025-11-20 20:15:00,061 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 15:15:34] 2025-11-20 20:15:00,062 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 15:15:34] 2025-11-20 20:15:00,062 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 15:15:34] 2025-11-20 20:15:00,062 | INFO     | job 6891558287 has completed (purged errors)
[2025-11-20 15:15:34] 2025-11-20 20:15:00,062 | INFO     | overall cleanup function is called
[2025-11-20 15:15:34] 2025-11-20 20:15:01,078 | INFO     | --- collectZombieJob: --- 10, [3241]
[2025-11-20 15:15:34] 2025-11-20 20:15:01,078 | INFO     | zombie collector waiting for pid 3241
[2025-11-20 15:15:34] 2025-11-20 20:15:01,084 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 15:15:34] 2025-11-20 20:15:01,084 | INFO     | collected zombie processes
[2025-11-20 15:15:34] 2025-11-20 20:15:01,084 | INFO     | will attempt to kill all subprocesses of pid=3241
[2025-11-20 15:15:34] 2025-11-20 20:15:01,171 | INFO     | process IDs to be killed: [3241] (in reverse order)
[2025-11-20 15:15:34] 2025-11-20 20:15:01,226 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 15:15:34] 2025-11-20 20:15:01,226 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 15:15:34] 2025-11-20 20:15:01,232 | INFO     | did not find any defunct processes belonging to 3241
[2025-11-20 15:15:34] 2025-11-20 20:15:01,235 | INFO     | did not find any defunct processes belonging to 3241
[2025-11-20 15:15:34] 2025-11-20 20:15:01,239 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 15:15:34] 2025-11-20 20:15:01,239 | INFO     | ready for new job
[2025-11-20 15:15:34] 2025-11-20 20:15:01,239 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 15:15:34] 2025-11-20 20:15:01,243 | INFO     | ***************************************
[2025-11-20 15:15:34] 2025-11-20 20:15:01,243 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 15:15:34] 2025-11-20 20:15:01,243 | INFO     | ***************************************
[2025-11-20 15:15:34] 2025-11-20 20:15:01,243 | INFO     | 
[2025-11-20 15:15:34] 2025-11-20 20:15:01,244 | INFO     | architecture information:
[2025-11-20 15:15:34] 2025-11-20 20:15:01,245 | INFO     | executing command: cat /etc/os-release
[2025-11-20 15:15:34] 2025-11-20 20:15:01,263 | INFO     | cat /etc/os-release:
[2025-11-20 15:15:34] NAME="CentOS Linux"
[2025-11-20 15:15:34] VERSION="7 (Core)"
[2025-11-20 15:15:34] ID="centos"
[2025-11-20 15:15:34] ID_LIKE="rhel fedora"
[2025-11-20 15:15:34] VERSION_ID="7"
[2025-11-20 15:15:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 15:15:34] ANSI_COLOR="0;31"
[2025-11-20 15:15:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 15:15:34] HOME_URL="https://www.centos.org/"
[2025-11-20 15:15:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 15:15:34] 
[2025-11-20 15:15:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 15:15:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 15:15:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 15:15:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 15:15:34] 
[2025-11-20 15:15:34] 2025-11-20 20:15:01,264 | INFO     | ***************************************
[2025-11-20 15:15:34] 2025-11-20 20:15:01,766 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-20 15:15:34] 2025-11-20 20:15:01,788 | INFO     | sufficient remaining disk space (17455644672 B)
[2025-11-20 15:15:34] 2025-11-20 20:15:01,789 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 15:15:34] 2025-11-20 20:15:01,789 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 15:15:34] 2025-11-20 20:15:01,789 | INFO     | update_server=False
[2025-11-20 15:15:34] 2025-11-20 20:15:01,789 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 15:15:34] 2025-11-20 20:15:01,790 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 15:15:34] 2025-11-20 20:15:01,818 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 15:15:34] 2025-11-20 20:15:01,818 | INFO     | aborting loop
[2025-11-20 15:15:34] 2025-11-20 20:15:01,861 | INFO     | all data control threads have been joined
[2025-11-20 15:15:34] 2025-11-20 20:15:01,995 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 15:15:34] 2025-11-20 20:15:02,042 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 15:15:34] 2025-11-20 20:15:02,273 | INFO     | all payload control threads have been joined
[2025-11-20 15:15:34] 2025-11-20 20:15:02,795 | INFO     | [job] retrieve thread has finished
[2025-11-20 15:15:34] 2025-11-20 20:15:02,796 | INFO     | [job] queue monitor thread has finished
[2025-11-20 15:15:34] 2025-11-20 20:15:02,809 | INFO     | [job] validate thread has finished
[2025-11-20 15:15:34] 2025-11-20 20:15:02,819 | INFO     | [job] job monitor thread has finished
[2025-11-20 15:15:34] 2025-11-20 20:15:02,822 | INFO     | [data] copytool_in thread has finished
[2025-11-20 15:15:34] 2025-11-20 20:15:02,868 | INFO     | [data] control thread has finished
[2025-11-20 15:15:34] 2025-11-20 20:15:03,076 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 15:15:34] 2025-11-20 20:15:03,092 | INFO     | [payload] failed_post thread has finished
[2025-11-20 15:15:34] 2025-11-20 20:15:03,228 | INFO     | all job control threads have been joined
[2025-11-20 15:15:34] 2025-11-20 20:15:03,279 | INFO     | [payload] control thread has finished
[2025-11-20 15:15:34] 2025-11-20 20:15:03,432 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 15:15:34] 2025-11-20 20:15:03,682 | INFO     | [payload] validate_post thread has finished
[2025-11-20 15:15:34] 2025-11-20 20:15:04,001 | INFO     | [data] copytool_out thread has finished
[2025-11-20 15:15:34] 2025-11-20 20:15:04,038 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 15:15:34] 2025-11-20 20:15:04,223 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 15:15:34] 2025-11-20 20:15:04,234 | INFO     | [job] control thread has finished
[2025-11-20 15:15:34] 2025-11-20 20:15:06,045 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 15:15:34] 2025-11-20 20:15:28,471 | INFO     | [monitor] cgroup control has ended
[2025-11-20 15:15:34] 2025-11-20 20:15:29,478 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140039800137536)>', '<ExcThread(monitor, started 140038549534464)>']
[2025-11-20 15:15:34] 2025-11-20 20:15:31,338 | INFO     | PID=29128 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-20 15:15:34] 2025-11-20 20:15:31,339 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 15:15:34] 2025-11-20 20:15:31,339 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 15:15:34] 2025-11-20 20:15:31,340 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 15:15:34] 2025-11-20 20:15:31,340 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 15:15:34] 2025-11-20 20:15:31,340 | INFO     | [monitor] control thread has ended
[2025-11-20 15:15:34] 2025-11-20 20:15:34,490 | INFO     | all workflow threads have been joined
[2025-11-20 15:15:34] 2025-11-20 20:15:34,491 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 15:15:34] 2025-11-20 20:15:34,491 | INFO     | traces error code: 0
[2025-11-20 15:15:34] 2025-11-20 20:15:34,492 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 15:15:34] 2025-11-20 20:15:34,618 [wrapper] ==== pilot stdout END ====
[2025-11-20 15:15:34] 2025-11-20 20:15:34,623 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 15:15:34] 2025-11-20 20:15:34,627 [wrapper] pilotpid: 29128
[2025-11-20 15:15:34] 2025-11-20 20:15:34,632 [wrapper] Pilot exit status: 0
[2025-11-20 15:15:34] 2025-11-20 20:15:34,647 [wrapper] pandaids: 6891558287
[2025-11-20 15:15:34] 2025-11-20 20:15:34,690 [wrapper] cleanup supervisor_pilot 23568 29129
[2025-11-20 15:15:34] 2025-11-20 20:15:34,695 [wrapper] Test setup, not cleaning
[2025-11-20 15:15:34] 2025-11-20 20:15:34,700 [wrapper] apfmon messages muted
[2025-11-20 15:15:34] 2025-11-20 20:15:34,705 [wrapper] ==== wrapper stdout END ====
[2025-11-20 15:15:34] 2025-11-20 20:15:34,709 [wrapper] ==== wrapper stderr END ====
[2025-11-20 15:15:34]  *** Error codes and diagnostics ***
[2025-11-20 15:15:34]     "exeErrorCode": 0,
[2025-11-20 15:15:34]     "exeErrorDiag": "",
[2025-11-20 15:15:34]     "pilotErrorCode": 0,
[2025-11-20 15:15:34]     "pilotErrorDiag": "",
[2025-11-20 15:15:34]  *** Listing of results directory ***
[2025-11-20 15:15:34] total 1329412
[2025-11-20 15:15:34] -rw-r--r-- 1 boincer umatlas    576529 Nov 18 10:15 pilot3.tar.gz
[2025-11-20 15:15:34] -rw-r--r-- 1 boincer umatlas      5112 Nov 18 10:23 queuedata.json
[2025-11-20 15:15:34] -rwx------ 1 boincer umatlas     36292 Nov 18 10:23 runpilot2-wrapper.sh
[2025-11-20 15:15:34] -rw-r--r-- 1 boincer umatlas       100 Nov 20 03:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 15:15:34] -rwxr-xr-x 1 boincer umatlas      7986 Nov 20 03:40 run_atlas
[2025-11-20 15:15:34] -rw-r--r-- 1 boincer umatlas       105 Nov 20 03:40 job.xml
[2025-11-20 15:15:34] -rw-r--r-- 2 boincer umatlas 409924627 Nov 20 03:40 EVNT.47493065._000049.pool.root.1
[2025-11-20 15:15:34] -rw-r--r-- 2 boincer umatlas     15120 Nov 20 03:40 start_atlas.sh
[2025-11-20 15:15:34] drwxrwx--x 2 boincer umatlas      4096 Nov 20 03:40 shared
[2025-11-20 15:15:34] -rw-r--r-- 2 boincer umatlas    590095 Nov 20 03:40 input.tar.gz
[2025-11-20 15:15:34] -rw-r--r-- 1 boincer umatlas         0 Nov 20 03:40 boinc_lockfile
[2025-11-20 15:15:34] -rw-r--r-- 1 boincer umatlas      2771 Nov 20 03:41 pandaJob.out
[2025-11-20 15:15:34] -rw------- 1 boincer umatlas    989443 Nov 20 03:41 agis_schedconf.cvmfs.json
[2025-11-20 15:15:34] drwx------ 5 boincer umatlas      4096 Nov 20 03:41 pilot3
[2025-11-20 15:15:34] -rw-r--r-- 1 boincer umatlas       532 Nov 20 15:05 boinc_task_state.xml
[2025-11-20 15:15:34] -rw-r--r-- 1 boincer umatlas      5910 Nov 20 15:13 init_data.xml
[2025-11-20 15:15:34] -rw------- 1 boincer umatlas 932143805 Nov 20 15:14 HITS.47493068._000489.pool.root.1
[2025-11-20 15:15:34] -rw------- 1 boincer umatlas      1061 Nov 20 15:14 memory_monitor_summary.json
[2025-11-20 15:15:34] -rw------- 1 boincer umatlas   1526164 Nov 20 15:14 agis_ddmendpoints.agis.ALL.json
[2025-11-20 15:15:34] -rw------- 1 boincer umatlas   1931529 Nov 20 15:14 log.47493068._000489.job.log.tgz.1
[2025-11-20 15:15:34] -rw------- 1 boincer umatlas      8667 Nov 20 15:14 heartbeat.json
[2025-11-20 15:15:34] -rw-r--r-- 1 boincer umatlas      8192 Nov 20 15:15 boinc_mmap_file
[2025-11-20 15:15:34] -rw-r--r-- 1 boincer umatlas        29 Nov 20 15:15 wrapper_checkpoint.txt
[2025-11-20 15:15:34] -rw------- 1 boincer umatlas        95 Nov 20 15:15 pilot_heartbeat.json
[2025-11-20 15:15:34] -rw------- 1 boincer umatlas      4746 Nov 20 15:15 pilotlog.txt
[2025-11-20 15:15:34] -rw------- 1 boincer umatlas   5731147 Nov 20 15:15 log.47493068._000489.job.log.1
[2025-11-20 15:15:34] -rw------- 1 boincer umatlas       353 Nov 20 15:15 output.list
[2025-11-20 15:15:34] -rw-r--r-- 1 boincer umatlas       620 Nov 20 15:15 runtime_log
[2025-11-20 15:15:34] -rw------- 1 boincer umatlas   7680000 Nov 20 15:15 result.tar.gz
[2025-11-20 15:15:34] -rw-r--r-- 1 boincer umatlas      8699 Nov 20 15:15 runtime_log.err
[2025-11-20 15:15:34] -rw------- 1 boincer umatlas       667 Nov 20 15:15 cL1LDmVjcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIKFKDmolNrwn.diag
[2025-11-20 15:15:34] -rw-r--r-- 1 boincer umatlas     21403 Nov 20 15:15 stderr.txt
[2025-11-20 15:15:34] HITS file was successfully produced:
[2025-11-20 15:15:34] -rw------- 1 boincer umatlas 932143805 Nov 20 15:14 shared/HITS.pool.root.1
[2025-11-20 15:15:34]  *** Contents of shared directory: ***
[2025-11-20 15:15:34] total 1318724
[2025-11-20 15:15:34] -rw-r--r-- 2 boincer umatlas 409924627 Nov 20 03:40 ATLAS.root_0
[2025-11-20 15:15:34] -rw-r--r-- 2 boincer umatlas     15120 Nov 20 03:40 start_atlas.sh
[2025-11-20 15:15:34] -rw-r--r-- 2 boincer umatlas    590095 Nov 20 03:40 input.tar.gz
[2025-11-20 15:15:34] -rw------- 1 boincer umatlas 932143805 Nov 20 15:14 HITS.pool.root.1
[2025-11-20 15:15:34] -rw------- 1 boincer umatlas   7680000 Nov 20 15:15 result.tar.gz
15:15:36 (25324): run_atlas exited; CPU time 321008.972472
15:15:36 (25324): called boinc_finish(0)

</stderr_txt>
]]>

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