Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-20 02:40:52 (15088): vboxwrapper version 26210
2025-11-20 02:40:52 (15088): BOINC client version: 8.2.6
2025-11-20 02:40:52 (15088): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2025-11-20 02:40:52 (15088): Successfully copied 'init_data.xml' to the shared directory.
2025-11-20 02:40:53 (15088): Create VM. (boinc_65bcbf200c3554e7, slot#13)
2025-11-20 02:40:53 (15088): Setting Memory Size for VM. (4300MB)
2025-11-20 02:40:54 (15088): Setting CPU Count for VM. (3)
2025-11-20 02:40:54 (15088): Setting Chipset Options for VM.
2025-11-20 02:40:54 (15088): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-20 02:40:54 (15088): Setting Boot Options for VM.
2025-11-20 02:40:55 (15088): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-20 02:40:55 (15088): Enabling VM Network Access.
2025-11-20 02:40:55 (15088): Disabling USB Support for VM.
2025-11-20 02:40:56 (15088): Disabling COM Port Support for VM.
2025-11-20 02:40:56 (15088): Disabling LPT Port Support for VM.
2025-11-20 02:40:56 (15088): Disabling Audio Support for VM.
2025-11-20 02:40:57 (15088): Disabling Clipboard Support for VM.
2025-11-20 02:40:57 (15088): Disabling Drag and Drop Support for VM.
2025-11-20 02:40:57 (15088): Adding storage controller(s) to VM.
2025-11-20 02:40:57 (15088): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-20 02:40:59 (15088): Adding VirtualBox Guest Additions to VM.
2025-11-20 02:41:00 (15088): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-20 02:41:00 (15088): forwarding host port 35685 to guest port 80
2025-11-20 02:41:00 (15088): Enabling remote desktop for VM.
2025-11-20 02:41:01 (15088): Enabling shared directory for VM.
2025-11-20 02:41:02 (15088): Starting VM using VBoxManage interface. (boinc_65bcbf200c3554e7, slot#13)
2025-11-20 02:41:08 (15088): Successfully started VM. (PID = '8184')
2025-11-20 02:41:08 (15088): Reporting VM Process ID to BOINC.
2025-11-20 02:41:08 (15088): Guest Log: BIOS: VirtualBox 7.2.4
2025-11-20 02:41:08 (15088): Guest Log: CPUID EDX: 0x178bfbff
2025-11-20 02:41:08 (15088): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-20 02:41:08 (15088): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-20 02:41:08 (15088): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-20 02:41:08 (15088): Detected: Web Application Enabled (http://localhost:35685)
2025-11-20 02:41:08 (15088): Detected: Remote Desktop Enabled (localhost:35686)
2025-11-20 02:41:08 (15088): Preference change detected
2025-11-20 02:41:08 (15088): Setting CPU throttle for VM. (100%)
2025-11-20 02:41:08 (15088): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-20 02:41:10 (15088): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-20 02:41:10 (15088): Guest Log: BIOS: Booting from Hard Disk...
2025-11-20 02:41:13 (15088): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-20 02:41:13 (15088): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-20 02:41:13 (15088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-20 02:41:13 (15088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-20 02:41:13 (15088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-20 02:41:13 (15088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-20 02:41:13 (15088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-20 02:41:13 (15088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-20 02:41:13 (15088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-20 02:41:13 (15088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-20 02:41:13 (15088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-20 02:41:13 (15088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-20 02:41:13 (15088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-20 02:41:13 (15088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-20 02:41:13 (15088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-20 02:41:13 (15088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-20 02:41:13 (15088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-20 02:41:13 (15088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-20 02:41:13 (15088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-20 02:41:13 (15088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-20 02:41:13 (15088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-20 02:41:13 (15088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-20 02:41:13 (15088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-20 02:41:13 (15088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-20 02:41:13 (15088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-20 02:41:13 (15088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-20 02:41:13 (15088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-20 02:41:13 (15088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-20 02:41:13 (15088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-20 02:41:13 (15088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-20 02:41:13 (15088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-20 02:41:13 (15088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-20 02:41:20 (15088): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-20 02:41:20 (15088): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-20 02:41:26 (15088): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-20 02:41:26 (15088): Guest Log: 00:00:00.000125 main     Log opened 2025-11-20T02:41:24.958005000Z
2025-11-20 02:41:26 (15088): Guest Log: 00:00:00.000230 main     OS Product: Linux
2025-11-20 02:41:26 (15088): Guest Log: 00:00:00.000268 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-20 02:41:26 (15088): Guest Log: 00:00:00.000363 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-20 02:41:26 (15088): Guest Log: 00:00:00.000395 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-20 02:41:26 (15088): Guest Log: 00:00:00.000395 main     Process ID: 1287
2025-11-20 02:41:26 (15088): Guest Log: 00:00:00.000396 main     Package type: LINUX_64BITS_GENERIC
2025-11-20 02:41:26 (15088): Guest Log: 00:00:00.001682 main     5.2.32 r132073 started. Verbose level = 0
2025-11-20 02:41:26 (15088): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-20 02:41:26 (15088): Guest Log: [INFO] Mounting shared directory
2025-11-20 02:41:26 (15088): Guest Log: [INFO] Checking for init_data.xml
2025-11-20 02:41:36 (15088): Guest Log: 00:00:10.003414 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 322 479 000ns (GuestNow=1 763 624 496 283 370 000 ns GuestLast=1 763 606 484 960 891 000 ns fSetTimeLastLoop=true )
2025-11-20 02:42:18 (15088): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-20 02:42:18 (15088): Guest Log: [INFO] Detected branch: prod
2025-11-20 02:42:18 (15088): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-20 02:42:18 (15088): Guest Log: Copying input files
2025-11-20 02:42:20 (15088): Guest Log: Copied input files into RunAtlas.
2025-11-20 02:42:20 (15088): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-20 02:42:20 (15088): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-20 02:42:20 (15088): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-20 02:42:20 (15088): Guest Log: Further information can be found at the LHC@home message board.
2025-11-20 02:42:31 (15088): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-20 02:42:31 (15088): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-20 02:42:31 (15088): Guest Log: 2.6.3.0 1588 0 32340 153074 4 1 3120538 4096000 0 65024 0 0 n/a 1292 506 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-11-20 02:42:32 (15088): Guest Log: copied the webapp to /var/www
2025-11-20 02:42:32 (15088): Guest Log: ATHENA_PROC_NUMBER=3
2025-11-20 02:42:32 (15088): Guest Log: ATHENA_CORE_NUMBER=3
2025-11-20 02:42:32 (15088): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-20 02:42:32 (15088): Guest Log:  *** Starting ATLAS job. (PandaID=6891070351 taskID=47483661) ***
2025-11-20 04:21:16 (15088): Status Report: Elapsed Time: '6000.000000'
2025-11-20 04:21:16 (15088): Status Report: CPU Time: '16573.312500'
2025-11-20 06:01:23 (15088): Status Report: Elapsed Time: '12000.000000'
2025-11-20 06:01:23 (15088): Status Report: CPU Time: '34159.281250'
2025-11-20 07:41:30 (15088): Status Report: Elapsed Time: '18000.000000'
2025-11-20 07:41:30 (15088): Status Report: CPU Time: '51949.921875'
2025-11-20 09:21:37 (15088): Status Report: Elapsed Time: '24000.000000'
2025-11-20 09:21:37 (15088): Status Report: CPU Time: '69806.031250'
2025-11-20 11:01:44 (15088): Status Report: Elapsed Time: '30000.000000'
2025-11-20 11:01:44 (15088): Status Report: CPU Time: '87657.921875'
2025-11-20 12:41:50 (15088): Status Report: Elapsed Time: '36000.000000'
2025-11-20 12:41:50 (15088): Status Report: CPU Time: '105504.812500'
2025-11-20 14:21:56 (15088): Status Report: Elapsed Time: '42000.000000'
2025-11-20 14:21:56 (15088): Status Report: CPU Time: '123355.437500'
2025-11-20 16:02:02 (15088): Status Report: Elapsed Time: '48000.000000'
2025-11-20 16:02:02 (15088): Status Report: CPU Time: '141192.984375'
2025-11-20 17:42:09 (15088): Status Report: Elapsed Time: '54000.000000'
2025-11-20 17:42:09 (15088): Status Report: CPU Time: '159048.203125'
2025-11-20 19:22:17 (15088): Status Report: Elapsed Time: '60000.000000'
2025-11-20 19:22:17 (15088): Status Report: CPU Time: '176889.718750'
2025-11-20 19:32:39 (15088): Guest Log:  *** Job finished ***
2025-11-20 19:32:39 (15088): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-20 19:32:39 (15088): Guest Log: 2025-11-21 00:32:31,012 | INFO     | all workflow threads have been joined
2025-11-20 19:32:39 (15088): Guest Log: 2025-11-21 00:32:31,012 | INFO     | end of generic workflow (traces error code: 0)
2025-11-20 19:32:39 (15088): Guest Log: 2025-11-21 00:32:31,012 | INFO     | traces error code: 0
2025-11-20 19:32:39 (15088): Guest Log: 2025-11-21 00:32:31,012 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-20 19:32:39 (15088): Guest Log: 2025-11-21 00:32:38,469 | INFO     | PID=5967 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-11-20 19:32:39 (15088): Guest Log: 2025-11-21 00:32:38,469 | INFO     | found 0 job(s) in 20 queues
2025-11-20 19:32:39 (15088): Guest Log: 2025-11-21 00:32:38,470 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-20 19:32:39 (15088): Guest Log: 2025-11-21 00:32:38,470 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-20 19:32:39 (15088): Guest Log: 2025-11-21 00:32:38,470 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-20 19:32:39 (15088): Guest Log: 2025-11-21 00:32:38,470 | INFO     | [monitor] control thread has ended
2025-11-20 19:32:39 (15088): Guest Log: 2025-11-21 00:32:38,535 [wrapper] ==== pilot stdout END ====
2025-11-20 19:32:39 (15088): Guest Log: 2025-11-21 00:32:38,540 [wrapper] ==== wrapper stdout RESUME ====
2025-11-20 19:32:39 (15088): Guest Log: 2025-11-21 00:32:38,543 [wrapper] pilotpid: 5967
2025-11-20 19:32:39 (15088): Guest Log: 2025-11-21 00:32:38,547 [wrapper] Pilot exit status: 0
2025-11-20 19:32:39 (15088): Guest Log: 2025-11-21 00:32:38,561 [wrapper] pandaids: 6891070351
2025-11-20 19:32:39 (15088): Guest Log: 2025-11-21 00:32:38,585 [wrapper] cleanup supervisor_pilot 27739 5968
2025-11-20 19:32:39 (15088): Guest Log: 2025-11-21 00:32:38,589 [wrapper] Test setup, not cleaning
2025-11-20 19:32:39 (15088): Guest Log: 2025-11-21 00:32:38,594 [wrapper] apfmon messages muted
2025-11-20 19:32:39 (15088): Guest Log: 2025-11-21 00:32:38,597 [wrapper] ==== wrapper stdout END ====
2025-11-20 19:32:39 (15088): Guest Log: 2025-11-21 00:32:38,602 [wrapper] ==== wrapper stderr END ====
2025-11-20 19:32:39 (15088): Guest Log:  *** Error codes and diagnostics ***
2025-11-20 19:32:39 (15088): Guest Log:     "exeErrorCode": 0,
2025-11-20 19:32:39 (15088): Guest Log:     "exeErrorDiag": "",
2025-11-20 19:32:39 (15088): Guest Log:     "pilotErrorCode": 0,
2025-11-20 19:32:39 (15088): Guest Log:     "pilotErrorDiag": "",
2025-11-20 19:32:39 (15088): Guest Log:  *** Listing of results directory ***
2025-11-20 19:32:39 (15088): Guest Log: total 903776
2025-11-20 19:32:39 (15088): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 18 05:55 pilot3.tar.gz
2025-11-20 19:32:39 (15088): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 18 05:58 runpilot2-wrapper.sh
2025-11-20 19:32:39 (15088): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 18 05:58 queuedata.json
2025-11-20 19:32:39 (15088): Guest Log: -rwxr-xr-x. 1 atlas atlas     11862 Nov 20 07:42 init_data.xml
2025-11-20 19:32:39 (15088): Guest Log: -rwxr-xr-x. 1 atlas atlas    590092 Nov 20 07:42 input.tar.gz
2025-11-20 19:32:39 (15088): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Nov 20 07:42 start_atlas.sh
2025-11-20 19:32:39 (15088): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 20 07:42 EVNT.47483658._000143.pool.root.1 -> /data/./ATLAS.root_0
2025-11-20 19:32:39 (15088): Guest Log: -rw-r--r--. 1 atlas atlas      2773 Nov 20 07:42 pandaJob.out
2025-11-20 19:32:39 (15088): Guest Log: -rw-------. 1 atlas atlas    989443 Nov 20 07:43 agis_schedconf.cvmfs.json
2025-11-20 19:32:39 (15088): Guest Log: drwx------. 5 atlas atlas      4096 Nov 20 07:43 pilot3
2025-11-20 19:32:39 (15088): Guest Log: -rw-------. 1 atlas atlas 902222883 Nov 21 00:31 HITS.47483661._001423.pool.root.1
2025-11-20 19:32:39 (15088): Guest Log: -rw-------. 1 atlas atlas      1038 Nov 21 00:31 memory_monitor_summary.json
2025-11-20 19:32:39 (15088): Guest Log: -rw-------. 1 atlas atlas   1526164 Nov 21 00:31 agis_ddmendpoints.agis.ALL.json
2025-11-20 19:32:39 (15088): Guest Log: -rw-------. 1 atlas atlas   1570608 Nov 21 00:31 log.47483661._001423.job.log.tgz.1
2025-11-20 19:32:39 (15088): Guest Log: -rw-------. 1 atlas atlas      8656 Nov 21 00:32 heartbeat.json
2025-11-20 19:32:39 (15088): Guest Log: -rw-------. 1 atlas atlas       744 Nov 21 00:32 pilotlog.txt
2025-11-20 19:32:39 (15088): Guest Log: -rw-------. 1 atlas atlas        95 Nov 21 00:32 pilot_heartbeat.json
2025-11-20 19:32:39 (15088): Guest Log: -rw-------. 1 atlas atlas   8126421 Nov 21 00:32 log.47483661._001423.job.log.1
2025-11-20 19:32:39 (15088): Guest Log: -rw-------. 1 atlas atlas       353 Nov 21 00:32 output.list
2025-11-20 19:32:39 (15088): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 21 00:32 runtime_log
2025-11-20 19:32:39 (15088): Guest Log: -rw-------. 1 atlas atlas   9717760 Nov 21 00:32 result.tar.gz
2025-11-20 19:32:39 (15088): Guest Log: -rw-r--r--. 1 atlas atlas      8637 Nov 21 00:32 runtime_log.err
2025-11-20 19:32:39 (15088): Guest Log: -rw-------. 1 atlas atlas       662 Nov 21 00:32 FIwMDmuuTf8n9Rq4apOajLDm4fhM0noT9bVof3QYDm84qMDmhk6P5m.diag
2025-11-20 19:32:39 (15088): Guest Log: Looking for outputfile HITS.47483661._001423.pool.root.1
2025-11-20 19:32:39 (15088): Guest Log: HITS file was successfully produced
2025-11-20 19:32:39 (15088): Guest Log: -rw-------. 1 atlas atlas 902222883 Nov 21 00:31 /home/atlas/RunAtlas/HITS.47483661._001423.pool.root.1
2025-11-20 19:32:43 (15088): Guest Log: Successfully finished the ATLAS job!
2025-11-20 19:32:43 (15088): Guest Log: Copying the results back to the shared directory!
2025-11-20 19:32:43 (15088): Guest Log:  *** Contents of shared directory: ***
2025-11-20 19:32:43 (15088): Guest Log: total 1291064
2025-11-20 19:32:43 (15088): Guest Log: -rwxrwxrwx. 1 root root 409478900 Nov 20 07:40 ATLAS.root_0
2025-11-20 19:32:43 (15088): Guest Log: -rwxrwxrwx. 1 root root 902222883 Nov 21 00:32 HITS.pool.root.1
2025-11-20 19:32:43 (15088): Guest Log: -rwxrwxrwx. 1 root root     11862 Nov 20 07:40 init_data.xml
2025-11-20 19:32:43 (15088): Guest Log: -rwxrwxrwx. 1 root root    590092 Nov 20 07:40 input.tar.gz
2025-11-20 19:32:43 (15088): Guest Log: -rwxrwxrwx. 1 root root   9717760 Nov 21 00:32 result.tar.gz
2025-11-20 19:32:43 (15088): Guest Log: -rwxrwxrwx. 1 root root     15120 Nov 20 07:40 start_atlas.sh
2025-11-20 19:32:43 (15088): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-20 19:32:43 (15088): VM Completion File Detected.
2025-11-20 19:32:43 (15088): Powering off VM.
2025-11-20 19:32:44 (15088): Successfully stopped VM.
2025-11-20 19:32:44 (15088): Deregistering VM. (boinc_65bcbf200c3554e7, slot#13)
2025-11-20 19:32:45 (15088): Removing network bandwidth throttle group from VM.
2025-11-20 19:32:45 (15088): Removing VM from VirtualBox.
2025-11-20 19:32:50 (15088): called boinc_finish(0)

</stderr_txt>
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