Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:55:56 (26093): wrapper (7.7.26015): starting
22:55:56 (26093): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 22:55:56] Arguments: --nthreads 8
[2025-11-22 22:55:56] Threads: 8
[2025-11-22 22:55:56] Checking for CVMFS
[2025-11-22 22:55:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 22:55:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 22:55:58] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 22:55:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 22:55:59] 2.11.2.0 32703 280004 140536 153185 3 85 16229994 25165825 4632 130560 2 137099458 99.874 77344777 3037 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-22 22:55:59] CVMFS is ok
[2025-11-22 22:55:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 22:55:59] Checking for apptainer binary...
[2025-11-22 22:55:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 22:55:59] Running /usr/bin/apptainer --version
[2025-11-22 22:56:00] apptainer version 1.3.2-1.el7
[2025-11-22 22:56:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 22:56:24] cg-vwn328.simple-grid.lan
[2025-11-22 22:56:24] apptainer works
[2025-11-22 22:56:24] Set ATHENA_PROC_NUMBER=8
[2025-11-22 22:56:24] Set ATHENA_CORE_NUMBER=8
[2025-11-22 22:56:24] Starting ATLAS job with PandaID=6891104829
[2025-11-22 22:56:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 00:35:08]  *** The last 200 lines of the pilot log: ***
[2025-11-24 00:35:08] 2025-11-23 23:34:00,485 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 00:35:08] 2025-11-23 23:34:02,244 | INFO     | time since job start (92024s) is within the limit (172800.0s)
[2025-11-24 00:35:08] 2025-11-23 23:34:02,989 | INFO     | monitor loop #6184: job 0:6891104829 is in state 'finished'
[2025-11-24 00:35:08] 2025-11-23 23:34:02,989 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 00:35:08] 2025-11-23 23:34:03,481 | INFO     | PID=29887 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 00:35:08] 2025-11-23 23:34:03,481 | INFO     | .. there are 9 such processes running
[2025-11-24 00:35:08] 2025-11-23 23:34:04,482 | INFO     | time since job start (92026s) is within the limit (172800.0s)
[2025-11-24 00:35:08] 2025-11-23 23:34:05,504 | INFO     | monitor loop #6185: job 0:6891104829 is in state 'finished'
[2025-11-24 00:35:08] 2025-11-23 23:34:05,504 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 00:35:08] 2025-11-23 23:34:06,489 | INFO     | time since job start (92028s) is within the limit (172800.0s)
[2025-11-24 00:35:08] 2025-11-23 23:34:08,015 | INFO     | monitor loop #6186: job 0:6891104829 is in state 'finished'
[2025-11-24 00:35:08] 2025-11-23 23:34:08,015 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 00:35:08] 2025-11-23 23:34:08,496 | INFO     | time since job start (92030s) is within the limit (172800.0s)
[2025-11-24 00:35:08] 2025-11-23 23:34:10,278 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 00:35:08] 2025-11-23 23:34:10,279 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-24 00:35:08] 2025-11-23 23:34:10,281 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6891104829/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 00:35:08] 2025-11-23 23:34:10,282 | INFO     | extracted standard info from prmon json
[2025-11-24 00:35:08] 2025-11-23 23:34:10,282 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 00:35:08] 2025-11-23 23:34:10,282 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 00:35:08] 2025-11-23 23:34:10,311 | INFO     | fitting pss+swap vs Time
[2025-11-24 00:35:08] 2025-11-23 23:34:10,314 | INFO     | sum of square deviations: 1044435965510.2628
[2025-11-24 00:35:08] 2025-11-23 23:34:10,381 | INFO     | sum of deviations: 4040564737872.4775
[2025-11-24 00:35:08] 2025-11-23 23:34:10,382 | INFO     | mean x: 1763895024.3128753
[2025-11-24 00:35:08] 2025-11-23 23:34:10,382 | INFO     | mean y: 2849412.7111407607
[2025-11-24 00:35:08] 2025-11-23 23:34:10,382 | INFO     | intersect: -6821055806.854268
[2025-11-24 00:35:08] 2025-11-23 23:34:10,384 | INFO     | chi2: 23.871130138451505
[2025-11-24 00:35:08] 2025-11-23 23:34:10,386 | INFO     | sum of square deviations: 1034020026249.1143
[2025-11-24 00:35:08] 2025-11-23 23:34:10,449 | INFO     | sum of deviations: 4525507855669.264
[2025-11-24 00:35:08] 2025-11-23 23:34:10,450 | INFO     | mean x: 1763894871.817269
[2025-11-24 00:35:08] 2025-11-23 23:34:10,450 | INFO     | mean y: 2856511.4002677375
[2025-11-24 00:35:08] 2025-11-23 23:34:10,450 | INFO     | intersect: -7717032752.195722
[2025-11-24 00:35:08] 2025-11-23 23:34:10,452 | INFO     | chi2: 20.85061747032389
[2025-11-24 00:35:08] 2025-11-23 23:34:10,452 | INFO     | current chi2=20.85061747032389 (change=12.653412932729932 %)
[2025-11-24 00:35:08] 2025-11-23 23:34:10,452 | INFO     | right removable region: 1493
[2025-11-24 00:35:08] 2025-11-23 23:34:10,454 | INFO     | sum of square deviations: 1034018825769.1132
[2025-11-24 00:35:08] 2025-11-23 23:34:10,527 | INFO     | sum of deviations: 3396822271771.162
[2025-11-24 00:35:08] 2025-11-23 23:34:10,527 | INFO     | mean x: 1763895176.817269
[2025-11-24 00:35:08] 2025-11-23 23:34:10,527 | INFO     | mean y: 2858836.7148594377
[2025-11-24 00:35:08] 2025-11-23 23:34:10,527 | INFO     | intersect: -5791656961.608245
[2025-11-24 00:35:08] 2025-11-23 23:34:10,529 | INFO     | chi2: 18.891680885652196
[2025-11-24 00:35:08] 2025-11-23 23:34:10,529 | INFO     | current chi2=18.891680885652196 (change=20.859713067285558 %)
[2025-11-24 00:35:08] 2025-11-23 23:34:10,529 | INFO     | left removable region: 10
[2025-11-24 00:35:08] 2025-11-23 23:34:10,531 | INFO     | sum of square deviations: 1011346835122.3848
[2025-11-24 00:35:08] 2025-11-23 23:34:10,554 | INFO     | time since job start (92032s) is within the limit (172800.0s)
[2025-11-24 00:35:08] 2025-11-23 23:34:10,565 | INFO     | monitor loop #6187: job 0:6891104829 is in state 'finished'
[2025-11-24 00:35:08] 2025-11-23 23:34:10,565 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 00:35:08] 2025-11-23 23:34:10,598 | INFO     | sum of deviations: 3387176229956.181
[2025-11-24 00:35:08] 2025-11-23 23:34:10,598 | INFO     | mean x: 1763895146.3270397
[2025-11-24 00:35:08] 2025-11-23 23:34:10,598 | INFO     | mean y: 2876371.5192178017
[2025-11-24 00:35:08] 2025-11-23 23:34:10,598 | INFO     | intersect: -5904714876.394294
[2025-11-24 00:35:08] 2025-11-23 23:34:10,600 | INFO     | chi2: 10.98519698759226
[2025-11-24 00:35:08] 2025-11-23 23:34:10,600 | INFO     | current memory leak: 3.35 B/s (using 1483 data points, chi2=10.99)
[2025-11-24 00:35:08] 2025-11-23 23:34:10,602 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-24 00:35:08] 2025-11-23 23:34:10,603 | INFO     | ..............................
[2025-11-24 00:35:08] 2025-11-23 23:34:10,603 | INFO     | . Timing measurements:
[2025-11-24 00:35:08] 2025-11-23 23:34:10,603 | INFO     | . get job = 0 s
[2025-11-24 00:35:08] 2025-11-23 23:34:10,603 | INFO     | . initial setup = 25 s
[2025-11-24 00:35:08] 2025-11-23 23:34:10,603 | INFO     | . payload setup = 162 s
[2025-11-24 00:35:08] 2025-11-23 23:34:10,603 | INFO     | . stage-in = 0 s
[2025-11-24 00:35:08] 2025-11-23 23:34:10,603 | INFO     | . payload execution = 91566 s
[2025-11-24 00:35:08] 2025-11-23 23:34:10,603 | INFO     | . stage-out = 5 s
[2025-11-24 00:35:08] 2025-11-23 23:34:10,603 | INFO     | . log creation = 2 s
[2025-11-24 00:35:08] 2025-11-23 23:34:10,604 | INFO     | ..............................
[2025-11-24 00:35:08] 2025-11-23 23:34:10,734 | INFO     | 
[2025-11-24 00:35:08] 2025-11-23 23:34:10,734 | INFO     | job summary report
[2025-11-24 00:35:08] 2025-11-23 23:34:10,734 | INFO     | --------------------------------------------------
[2025-11-24 00:35:08] 2025-11-23 23:34:10,734 | INFO     | PanDA job id: 6891104829
[2025-11-24 00:35:08] 2025-11-23 23:34:10,734 | INFO     | task id: 47483661
[2025-11-24 00:35:08] 2025-11-23 23:34:10,735 | INFO     | errors: (none)
[2025-11-24 00:35:08] 2025-11-23 23:34:10,735 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 00:35:08] 2025-11-23 23:34:10,735 | INFO     | pilot state: finished 
[2025-11-24 00:35:08] 2025-11-23 23:34:10,735 | INFO     | transexitcode: 0
[2025-11-24 00:35:08] 2025-11-23 23:34:10,735 | INFO     | exeerrorcode: 0
[2025-11-24 00:35:08] 2025-11-23 23:34:10,735 | INFO     | exeerrordiag: 
[2025-11-24 00:35:08] 2025-11-23 23:34:10,735 | INFO     | exitcode: 0
[2025-11-24 00:35:08] 2025-11-23 23:34:10,735 | INFO     | exitmsg: OK
[2025-11-24 00:35:08] 2025-11-23 23:34:10,735 | INFO     | cpuconsumptiontime: 340917 s
[2025-11-24 00:35:08] 2025-11-23 23:34:10,735 | INFO     | nevents: 1000
[2025-11-24 00:35:08] 2025-11-23 23:34:10,735 | INFO     | neventsw: 0
[2025-11-24 00:35:08] 2025-11-23 23:34:10,736 | INFO     | pid: 4140
[2025-11-24 00:35:08] 2025-11-23 23:34:10,736 | INFO     | pgrp: 4140
[2025-11-24 00:35:08] 2025-11-23 23:34:10,736 | INFO     | corecount: 8
[2025-11-24 00:35:08] 2025-11-23 23:34:10,736 | INFO     | event service: False
[2025-11-24 00:35:08] 2025-11-23 23:34:10,736 | INFO     | sizes: {0: 2297968, 1: 2298653, 2: 2298852, 13: 2298852, 24: 2298908, 34: 2298936, 45: 2299092, 56: 2299120, 67: 2299148, 77: 2299176, 88: 2299232, 93: 2299802, 99
[2025-11-24 00:35:08] 2025-11-23 23:34:10,736 | INFO     | --------------------------------------------------
[2025-11-24 00:35:08] 2025-11-23 23:34:10,736 | INFO     | 
[2025-11-24 00:35:08] 2025-11-23 23:34:10,736 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-11-24 00:35:08] 2025-11-23 23:34:11,316 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 00:35:08] 2025-11-23 23:34:11,316 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 00:35:08] 2025-11-23 23:34:11,316 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 00:35:08] 2025-11-23 23:34:11,316 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 00:35:08] 2025-11-23 23:34:11,316 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 00:35:08] 2025-11-23 23:34:11,316 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 00:35:08] 2025-11-23 23:34:11,316 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 00:35:08] 2025-11-23 23:34:11,317 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 00:35:08] 2025-11-23 23:34:11,317 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 00:35:08] 2025-11-23 23:34:11,317 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 00:35:08] 2025-11-23 23:34:11,317 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 00:35:08] 2025-11-23 23:34:11,317 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 00:35:08] 2025-11-23 23:34:11,317 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 00:35:08] 2025-11-23 23:34:11,317 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 00:35:08] 2025-11-23 23:34:11,317 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 00:35:08] 2025-11-23 23:34:11,317 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 00:35:08] 2025-11-23 23:34:11,317 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 00:35:08] 2025-11-23 23:34:11,317 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 00:35:08] 2025-11-23 23:34:11,318 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 00:35:08] 2025-11-23 23:34:11,318 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 00:35:08] 2025-11-23 23:34:11,318 | INFO     | job 6891104829 has completed (purged errors)
[2025-11-24 00:35:08] 2025-11-23 23:34:11,318 | INFO     | overall cleanup function is called
[2025-11-24 00:35:08] 2025-11-23 23:34:12,339 | INFO     | --- collectZombieJob: --- 10, [4140]
[2025-11-24 00:35:08] 2025-11-23 23:34:12,339 | INFO     | zombie collector waiting for pid 4140
[2025-11-24 00:35:08] 2025-11-23 23:34:12,339 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 00:35:08] 2025-11-23 23:34:12,339 | INFO     | collected zombie processes
[2025-11-24 00:35:08] 2025-11-23 23:34:12,340 | INFO     | will attempt to kill all subprocesses of pid=4140
[2025-11-24 00:35:08] 2025-11-23 23:34:12,451 | INFO     | process IDs to be killed: [4140] (in reverse order)
[2025-11-24 00:35:08] 2025-11-23 23:34:13,696 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 00:35:08] 2025-11-23 23:34:13,696 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 00:35:08] 2025-11-23 23:34:13,699 | INFO     | did not find any defunct processes belonging to 4140
[2025-11-24 00:35:08] 2025-11-23 23:34:13,703 | INFO     | did not find any defunct processes belonging to 4140
[2025-11-24 00:35:08] 2025-11-23 23:34:13,746 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 00:35:08] 2025-11-23 23:34:13,747 | INFO     | ready for new job
[2025-11-24 00:35:08] 2025-11-23 23:34:13,747 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 00:35:08] 2025-11-23 23:34:13,753 | INFO     | ***************************************
[2025-11-24 00:35:08] 2025-11-23 23:34:13,753 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 00:35:08] 2025-11-23 23:34:13,754 | INFO     | ***************************************
[2025-11-24 00:35:08] 2025-11-23 23:34:13,754 | INFO     | 
[2025-11-24 00:35:08] 2025-11-23 23:34:13,754 | INFO     | pilot is running in a VM
[2025-11-24 00:35:08] 2025-11-23 23:34:13,754 | INFO     | architecture information:
[2025-11-24 00:35:08] 2025-11-23 23:34:13,763 | INFO     | executing command: cat /etc/os-release
[2025-11-24 00:35:08] 2025-11-23 23:34:14,047 | INFO     | cat /etc/os-release:
[2025-11-24 00:35:08] NAME="CentOS Linux"
[2025-11-24 00:35:08] VERSION="7 (Core)"
[2025-11-24 00:35:08] ID="centos"
[2025-11-24 00:35:08] ID_LIKE="rhel fedora"
[2025-11-24 00:35:08] VERSION_ID="7"
[2025-11-24 00:35:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 00:35:08] ANSI_COLOR="0;31"
[2025-11-24 00:35:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 00:35:08] HOME_URL="https://www.centos.org/"
[2025-11-24 00:35:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 00:35:08] 
[2025-11-24 00:35:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 00:35:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 00:35:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 00:35:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 00:35:08] 
[2025-11-24 00:35:08] 2025-11-23 23:34:14,048 | INFO     | ***************************************
[2025-11-24 00:35:08] 2025-11-23 23:34:14,551 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-11-24 00:35:08] 2025-11-23 23:34:14,779 | INFO     | sufficient remaining disk space (495192113152 B)
[2025-11-24 00:35:08] 2025-11-23 23:34:14,779 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 00:35:08] 2025-11-23 23:34:14,780 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 00:35:08] 2025-11-23 23:34:14,780 | INFO     | update_server=False
[2025-11-24 00:35:08] 2025-11-23 23:34:14,780 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 00:35:08] 2025-11-23 23:34:14,781 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 00:35:08] 2025-11-23 23:34:14,781 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 00:35:08] 2025-11-23 23:34:14,782 | INFO     | aborting loop
[2025-11-24 00:35:08] 2025-11-23 23:34:15,524 | INFO     | all data control threads have been joined
[2025-11-24 00:35:08] 2025-11-23 23:34:15,696 | INFO     | all job control threads have been joined
[2025-11-24 00:35:08] 2025-11-23 23:34:15,749 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 00:35:08] 2025-11-23 23:34:15,786 | INFO     | [job] retrieve thread has finished
[2025-11-24 00:35:08] 2025-11-23 23:34:15,787 | INFO     | [job] job monitor thread has finished
[2025-11-24 00:35:08] 2025-11-23 23:34:15,836 | INFO     | all payload control threads have been joined
[2025-11-24 00:35:08] 2025-11-23 23:34:15,920 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 00:35:08] 2025-11-23 23:34:16,120 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 00:35:08] 2025-11-23 23:34:16,231 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 00:35:08] 2025-11-23 23:34:16,260 | INFO     | [payload] validate_post thread has finished
[2025-11-24 00:35:08] 2025-11-23 23:34:16,529 | INFO     | [data] control thread has finished
[2025-11-24 00:35:08] 2025-11-23 23:34:16,702 | INFO     | [job] control thread has finished
[2025-11-24 00:35:08] 2025-11-23 23:34:16,704 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 00:35:08] 2025-11-23 23:34:16,714 | INFO     | [payload] failed_post thread has finished
[2025-11-24 00:35:08] 2025-11-23 23:34:16,755 | INFO     | [job] queue monitor thread has finished
[2025-11-24 00:35:08] 2025-11-23 23:34:16,842 | INFO     | [payload] control thread has finished
[2025-11-24 00:35:08] 2025-11-23 23:34:16,843 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 00:35:08] 2025-11-23 23:34:17,033 | INFO     | [data] copytool_in thread has finished
[2025-11-24 00:35:08] 2025-11-23 23:34:17,067 | INFO     | [job] validate thread has finished
[2025-11-24 00:35:08] 2025-11-23 23:34:18,238 | INFO     | [data] copytool_out thread has finished
[2025-11-24 00:35:08] 2025-11-23 23:34:18,790 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 00:35:08] 2025-11-23 23:34:43,733 | INFO     | PID=29887 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 00:35:08] 2025-11-23 23:34:43,733 | INFO     | .. there are 9 such processes running
[2025-11-24 00:35:08] 2025-11-23 23:34:43,733 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 00:35:08] 2025-11-23 23:34:43,734 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 00:35:08] 2025-11-23 23:34:43,734 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 00:35:08] 2025-11-23 23:34:58,639 | INFO     | [monitor] cgroup control has ended
[2025-11-24 00:35:08] 2025-11-23 23:34:59,563 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139738039785280)>', '<ExcThread(monitor, started 139737096517376)>']
[2025-11-24 00:35:08] 2025-11-23 23:34:59,826 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 00:35:08] 2025-11-23 23:34:59,826 | INFO     | [monitor] control thread has ended
[2025-11-24 00:35:08] 2025-11-23 23:35:04,589 | INFO     | all workflow threads have been joined
[2025-11-24 00:35:08] 2025-11-23 23:35:04,589 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 00:35:08] 2025-11-23 23:35:04,590 | INFO     | traces error code: 0
[2025-11-24 00:35:08] 2025-11-23 23:35:04,590 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 00:35:08] 2025-11-23 23:35:04,936 [wrapper] ==== pilot stdout END ====
[2025-11-24 00:35:08] 2025-11-23 23:35:04,972 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 00:35:08] 2025-11-23 23:35:05,019 [wrapper] pilotpid: 29887
[2025-11-24 00:35:08] 2025-11-23 23:35:05,080 [wrapper] Pilot exit status: 0
[2025-11-24 00:35:08] 2025-11-23 23:35:05,364 [wrapper] pandaids: 6891104829
[2025-11-24 00:35:08] 2025-11-23 23:35:06,148 [wrapper] cleanup supervisor_pilot 21056 29888
[2025-11-24 00:35:08] 2025-11-23 23:35:06,262 [wrapper] Test setup, not cleaning
[2025-11-24 00:35:08] 2025-11-23 23:35:06,373 [wrapper] apfmon messages muted
[2025-11-24 00:35:08] 2025-11-23 23:35:06,475 [wrapper] ==== wrapper stdout END ====
[2025-11-24 00:35:08] 2025-11-23 23:35:06,524 [wrapper] ==== wrapper stderr END ====
[2025-11-24 00:35:08]  *** Error codes and diagnostics ***
[2025-11-24 00:35:08]     "exeErrorCode": 0,
[2025-11-24 00:35:08]     "exeErrorDiag": "",
[2025-11-24 00:35:08]     "pilotErrorCode": 0,
[2025-11-24 00:35:08]     "pilotErrorDiag": "",
[2025-11-24 00:35:08]  *** Listing of results directory ***
[2025-11-24 00:35:08] total 1333412
[2025-11-24 00:35:08] -rw-r--r--. 1 boinc boinc    576529 Nov 18 07:54 pilot3.tar.gz
[2025-11-24 00:35:08] -rw-r--r--. 1 boinc boinc      5112 Nov 18 07:58 queuedata.json
[2025-11-24 00:35:08] -rwx------. 1 boinc boinc     36292 Nov 18 07:59 runpilot2-wrapper.sh
[2025-11-24 00:35:08] -rw-r--r--. 1 boinc boinc       100 Nov 22 22:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 00:35:08] -rwxr-xr-x. 1 boinc boinc      7986 Nov 22 22:55 run_atlas
[2025-11-24 00:35:08] -rw-r--r--. 1 boinc boinc       105 Nov 22 22:55 job.xml
[2025-11-24 00:35:08] -rw-r--r--. 1 boinc boinc      6392 Nov 22 22:55 init_data.xml
[2025-11-24 00:35:08] -rw-r--r--. 2 boinc boinc 409273415 Nov 22 22:55 EVNT.47483658._000231.pool.root.1
[2025-11-24 00:35:08] -rw-r--r--. 2 boinc boinc     15120 Nov 22 22:55 start_atlas.sh
[2025-11-24 00:35:08] drwxrwx--x. 2 boinc boinc        68 Nov 22 22:55 shared
[2025-11-24 00:35:08] -rw-r--r--. 2 boinc boinc    590101 Nov 22 22:55 input.tar.gz
[2025-11-24 00:35:08] -rw-r--r--. 1 boinc boinc         0 Nov 22 22:55 boinc_lockfile
[2025-11-24 00:35:08] -rw-r--r--. 1 boinc boinc      2773 Nov 22 22:56 pandaJob.out
[2025-11-24 00:35:08] -rw-------. 1 boinc boinc    989768 Nov 22 22:59 agis_schedconf.cvmfs.json
[2025-11-24 00:35:08] drwx------. 5 boinc boinc      4096 Nov 22 23:00 pilot3
[2025-11-24 00:35:08] -rw-r--r--. 1 boinc boinc       533 Nov 24 00:09 boinc_task_state.xml
[2025-11-24 00:35:08] -rw-------. 1 boinc boinc 922551435 Nov 24 00:30 HITS.47483661._002006.pool.root.1
[2025-11-24 00:35:08] -rw-------. 1 boinc boinc      1031 Nov 24 00:32 memory_monitor_summary.json
[2025-11-24 00:35:08] -rw-------. 1 boinc boinc   1526164 Nov 24 00:32 agis_ddmendpoints.agis.ALL.json
[2025-11-24 00:35:08] -rw-------. 1 boinc boinc   2572623 Nov 24 00:32 log.47483661._002006.job.log.tgz.1
[2025-11-24 00:35:08] -rw-------. 1 boinc boinc        95 Nov 24 00:33 pilot_heartbeat.json
[2025-11-24 00:35:08] -rw-------. 1 boinc boinc      7959 Nov 24 00:34 heartbeat.json
[2025-11-24 00:35:08] -rw-r--r--. 1 boinc boinc        29 Nov 24 00:34 wrapper_checkpoint.txt
[2025-11-24 00:35:08] -rw-r--r--. 1 boinc boinc      8192 Nov 24 00:34 boinc_mmap_file
[2025-11-24 00:35:08] -rw-------. 1 boinc boinc      4884 Nov 24 00:35 pilotlog.txt
[2025-11-24 00:35:08] -rw-------. 1 boinc boinc  12263492 Nov 24 00:35 log.47483661._002006.job.log.1
[2025-11-24 00:35:08] -rw-------. 1 boinc boinc       353 Nov 24 00:35 output.list
[2025-11-24 00:35:08] -rw-r--r--. 1 boinc boinc       620 Nov 24 00:35 runtime_log
[2025-11-24 00:35:08] -rw-------. 1 boinc boinc  14858240 Nov 24 00:35 result.tar.gz
[2025-11-24 00:35:08] -rw-r--r--. 1 boinc boinc      8703 Nov 24 00:35 runtime_log.err
[2025-11-24 00:35:08] -rw-------. 1 boinc boinc       662 Nov 24 00:35 0xIKDmJrUf8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmrNKODmM6G6zm.diag
[2025-11-24 00:35:08] -rw-r--r--. 1 boinc boinc     21518 Nov 24 00:35 stderr.txt
[2025-11-24 00:35:08] HITS file was successfully produced:
[2025-11-24 00:35:08] -rw-------. 1 boinc boinc 922551435 Nov 24 00:30 shared/HITS.pool.root.1
[2025-11-24 00:35:08]  *** Contents of shared directory: ***
[2025-11-24 00:35:08] total 1315724
[2025-11-24 00:35:08] -rw-r--r--. 2 boinc boinc 409273415 Nov 22 22:55 ATLAS.root_0
[2025-11-24 00:35:08] -rw-r--r--. 2 boinc boinc     15120 Nov 22 22:55 start_atlas.sh
[2025-11-24 00:35:08] -rw-r--r--. 2 boinc boinc    590101 Nov 22 22:55 input.tar.gz
[2025-11-24 00:35:08] -rw-------. 1 boinc boinc 922551435 Nov 24 00:30 HITS.pool.root.1
[2025-11-24 00:35:08] -rw-------. 1 boinc boinc  14858240 Nov 24 00:35 result.tar.gz
00:35:10 (26093): run_atlas exited; CPU time 341459.578436
00:35:10 (26093): called boinc_finish(0)

</stderr_txt>
]]>

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