Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:27:57 (819): wrapper (7.7.26015): starting
00:27:57 (819): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 00:27:57] Arguments: --nthreads 8
[2025-11-20 00:27:57] Threads: 8
[2025-11-20 00:27:57] Checking for CVMFS
[2025-11-20 00:27:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 00:27:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 00:27:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 00:27:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 00:27:57] 2.11.2.0 2878 48436 83536 153071 3 1 17023878 20275200 1 130560 0 9029778 99.733 3085671 34152 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 00:27:57] CVMFS is ok
[2025-11-20 00:27:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 00:27:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 00:27:57] Further information can be found at the LHC@home message board.
[2025-11-20 00:27:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 00:27:57] Checking for apptainer binary...
[2025-11-20 00:27:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 00:27:57] Running /usr/bin/apptainer --version
[2025-11-20 00:27:57] apptainer version 1.3.2-1.el7
[2025-11-20 00:27:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 00:27:59] c-204-27.aglt2.org
[2025-11-20 00:27:59] apptainer works
[2025-11-20 00:27:59] Set ATHENA_PROC_NUMBER=8
[2025-11-20 00:27:59] Set ATHENA_CORE_NUMBER=8
[2025-11-20 00:27:59] Starting ATLAS job with PandaID=6891558320
[2025-11-20 00:27:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 12:54:00]  *** The last 200 lines of the pilot log: ***
[2025-11-20 12:54:00] 2025-11-20 17:53:26,151 | INFO     | monitor loop #3290: job 0:6891558320 is in state 'finished'
[2025-11-20 12:54:00] 2025-11-20 17:53:26,159 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 12:54:00] 2025-11-20 17:53:27,299 | INFO     | time since job start (44709s) is within the limit (172800.0s)
[2025-11-20 12:54:00] 2025-11-20 17:53:27,300 | INFO     | 44712s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-20 12:54:00] 2025-11-20 17:53:27,898 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-20 12:54:00] 2025-11-20 17:53:27,902 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-11-20 12:54:00] 2025-11-20 17:53:27,904 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6891558320/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 12:54:00] 2025-11-20 17:53:27,905 | INFO     | extracted standard info from prmon json
[2025-11-20 12:54:00] 2025-11-20 17:53:27,905 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 12:54:00] 2025-11-20 17:53:27,905 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 12:54:00] 2025-11-20 17:53:27,917 | INFO     | fitting pss+swap vs Time
[2025-11-20 12:54:00] 2025-11-20 17:53:27,918 | INFO     | sum of square deviations: 122121397247.82825
[2025-11-20 12:54:00] 2025-11-20 17:53:27,930 | INFO     | sum of deviations: 668024712456.6069
[2025-11-20 12:54:00] 2025-11-20 17:53:27,930 | INFO     | mean x: 1763638856.6248295
[2025-11-20 12:54:00] 2025-11-20 17:53:27,930 | INFO     | mean y: 3257627.8567530694
[2025-11-20 12:54:00] 2025-11-20 17:53:27,930 | INFO     | intersect: -9644145420.465744
[2025-11-20 12:54:00] 2025-11-20 17:53:27,931 | INFO     | chi2: 7.119805377566527
[2025-11-20 12:54:00] 2025-11-20 17:53:27,932 | INFO     | sum of square deviations: 119639481095.86328
[2025-11-20 12:54:00] 2025-11-20 17:53:27,946 | INFO     | sum of deviations: 978974362556.346
[2025-11-20 12:54:00] 2025-11-20 17:53:27,946 | INFO     | mean x: 1763638704.1291208
[2025-11-20 12:54:00] 2025-11-20 17:53:27,946 | INFO     | mean y: 3276736.6346153845
[2025-11-20 12:54:00] 2025-11-20 17:53:27,946 | INFO     | intersect: -14428055298.072817
[2025-11-20 12:54:00] 2025-11-20 17:53:27,947 | INFO     | chi2: 3.280143031723569
[2025-11-20 12:54:00] 2025-11-20 17:53:27,947 | INFO     | current chi2=3.280143031723569 (change=53.929316072896825 %)
[2025-11-20 12:54:00] 2025-11-20 17:53:27,948 | INFO     | sum of square deviations: 117191426043.86989
[2025-11-20 12:54:00] 2025-11-20 17:53:27,969 | INFO     | sum of deviations: 1105988917219.0698
[2025-11-20 12:54:00] 2025-11-20 17:53:27,969 | INFO     | mean x: 1763638551.6334717
[2025-11-20 12:54:00] 2025-11-20 17:53:27,969 | INFO     | mean y: 3284642.641770401
[2025-11-20 12:54:00] 2025-11-20 17:53:27,969 | INFO     | intersect: -16640976443.119997
[2025-11-20 12:54:00] 2025-11-20 17:53:27,970 | INFO     | chi2: 2.5204718111750797
[2025-11-20 12:54:00] 2025-11-20 17:53:27,970 | INFO     | current chi2=2.5204718111750797 (change=23.159698013208768 %)
[2025-11-20 12:54:00] 2025-11-20 17:53:27,970 | INFO     | right removable region: 722
[2025-11-20 12:54:00] 2025-11-20 17:53:27,971 | INFO     | sum of square deviations: 119639201715.86328
[2025-11-20 12:54:00] 2025-11-20 17:53:27,993 | INFO     | sum of deviations: 437346704128.7389
[2025-11-20 12:54:00] 2025-11-20 17:53:27,993 | INFO     | mean x: 1763639009.1291208
[2025-11-20 12:54:00] 2025-11-20 17:53:27,993 | INFO     | mean y: 3271778.0453296704
[2025-11-20 12:54:00] 2025-11-20 17:53:27,993 | INFO     | intersect: -6443793204.445474
[2025-11-20 12:54:00] 2025-11-20 17:53:27,994 | INFO     | chi2: 4.8258308628191395
[2025-11-20 12:54:00] 2025-11-20 17:53:27,994 | INFO     | current chi2=4.8258308628191395 (change=32.21962389555434 %)
[2025-11-20 12:54:00] 2025-11-20 17:53:27,995 | INFO     | sum of square deviations: 117190911570.13557
[2025-11-20 12:54:00] 2025-11-20 17:53:28,006 | INFO     | sum of deviations: 389792595541.7462
[2025-11-20 12:54:00] 2025-11-20 17:53:28,006 | INFO     | mean x: 1763639161.6320884
[2025-11-20 12:54:00] 2025-11-20 17:53:28,006 | INFO     | mean y: 3274738.8298755186
[2025-11-20 12:54:00] 2025-11-20 17:53:28,006 | INFO     | intersect: -5862824237.627174
[2025-11-20 12:54:00] 2025-11-20 17:53:28,007 | INFO     | chi2: 4.777225720843773
[2025-11-20 12:54:00] 2025-11-20 17:53:28,007 | INFO     | current chi2=4.777225720843773 (change=1.007187018298706 %)
[2025-11-20 12:54:00] 2025-11-20 17:53:28,007 | INFO     | left removable region: 20
[2025-11-20 12:54:00] 2025-11-20 17:53:28,008 | INFO     | sum of square deviations: 107273123136.59248
[2025-11-20 12:54:00] 2025-11-20 17:53:28,018 | INFO     | sum of deviations: 792101151316.5192
[2025-11-20 12:54:00] 2025-11-20 17:53:28,018 | INFO     | mean x: 1763639131.148148
[2025-11-20 12:54:00] 2025-11-20 17:53:28,019 | INFO     | mean y: 3306825.168091168
[2025-11-20 12:54:00] 2025-11-20 17:53:28,019 | INFO     | intersect: -13019345498.569302
[2025-11-20 12:54:00] 2025-11-20 17:53:28,019 | INFO     | chi2: 0.05364674306280935
[2025-11-20 12:54:00] 2025-11-20 17:53:28,020 | INFO     | current memory leak: 7.38 B/s (using 702 data points, chi2=0.05)
[2025-11-20 12:54:00] 2025-11-20 17:53:28,020 | INFO     | could have reported an average CPU frequency of 2166 MHz (28 samples)
[2025-11-20 12:54:00] 2025-11-20 17:53:28,020 | INFO     | ..............................
[2025-11-20 12:54:00] 2025-11-20 17:53:28,020 | INFO     | . Timing measurements:
[2025-11-20 12:54:00] 2025-11-20 17:53:28,021 | INFO     | . get job = 0 s
[2025-11-20 12:54:00] 2025-11-20 17:53:28,021 | INFO     | . initial setup = 2 s
[2025-11-20 12:54:00] 2025-11-20 17:53:28,021 | INFO     | . payload setup = 9 s
[2025-11-20 12:54:00] 2025-11-20 17:53:28,021 | INFO     | . stage-in = 0 s
[2025-11-20 12:54:00] 2025-11-20 17:53:28,021 | INFO     | . payload execution = 44666 s
[2025-11-20 12:54:00] 2025-11-20 17:53:28,021 | INFO     | . stage-out = 3 s
[2025-11-20 12:54:00] 2025-11-20 17:53:28,021 | INFO     | . log creation = 0 s
[2025-11-20 12:54:00] 2025-11-20 17:53:28,021 | INFO     | ..............................
[2025-11-20 12:54:00] 2025-11-20 17:53:28,115 | INFO     | 
[2025-11-20 12:54:00] 2025-11-20 17:53:28,116 | INFO     | job summary report
[2025-11-20 12:54:00] 2025-11-20 17:53:28,116 | INFO     | --------------------------------------------------
[2025-11-20 12:54:00] 2025-11-20 17:53:28,116 | INFO     | PanDA job id: 6891558320
[2025-11-20 12:54:00] 2025-11-20 17:53:28,116 | INFO     | task id: 47493068
[2025-11-20 12:54:00] 2025-11-20 17:53:28,116 | INFO     | errors: (none)
[2025-11-20 12:54:00] 2025-11-20 17:53:28,116 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 12:54:00] 2025-11-20 17:53:28,116 | INFO     | pilot state: finished 
[2025-11-20 12:54:00] 2025-11-20 17:53:28,117 | INFO     | transexitcode: 0
[2025-11-20 12:54:00] 2025-11-20 17:53:28,117 | INFO     | exeerrorcode: 0
[2025-11-20 12:54:00] 2025-11-20 17:53:28,117 | INFO     | exeerrordiag: 
[2025-11-20 12:54:00] 2025-11-20 17:53:28,117 | INFO     | exitcode: 0
[2025-11-20 12:54:00] 2025-11-20 17:53:28,117 | INFO     | exitmsg: OK
[2025-11-20 12:54:00] 2025-11-20 17:53:28,117 | INFO     | cpuconsumptiontime: 346219 s
[2025-11-20 12:54:00] 2025-11-20 17:53:28,117 | INFO     | nevents: 1000
[2025-11-20 12:54:00] 2025-11-20 17:53:28,117 | INFO     | neventsw: 0
[2025-11-20 12:54:00] 2025-11-20 17:53:28,117 | INFO     | pid: 12082
[2025-11-20 12:54:00] 2025-11-20 17:53:28,118 | INFO     | pgrp: 12082
[2025-11-20 12:54:00] 2025-11-20 17:53:28,118 | INFO     | corecount: 8
[2025-11-20 12:54:00] 2025-11-20 17:53:28,118 | INFO     | event service: False
[2025-11-20 12:54:00] 2025-11-20 17:53:28,118 | INFO     | sizes: {0: 2297025, 1: 2297224, 7: 2297486, 12: 2297514, 44680: 2343343, 44685: 2354117, 44693: 2354307}
[2025-11-20 12:54:00] 2025-11-20 17:53:28,118 | INFO     | --------------------------------------------------
[2025-11-20 12:54:00] 2025-11-20 17:53:28,118 | INFO     | 
[2025-11-20 12:54:00] 2025-11-20 17:53:28,118 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-20 12:54:00] 2025-11-20 17:53:28,147 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 12:54:00] 2025-11-20 17:53:28,147 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 12:54:00] 2025-11-20 17:53:28,147 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 12:54:00] 2025-11-20 17:53:28,148 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 12:54:00] 2025-11-20 17:53:28,148 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 12:54:00] 2025-11-20 17:53:28,148 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 12:54:00] 2025-11-20 17:53:28,148 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 12:54:00] 2025-11-20 17:53:28,148 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 12:54:00] 2025-11-20 17:53:28,148 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 12:54:00] 2025-11-20 17:53:28,149 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 12:54:00] 2025-11-20 17:53:28,149 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 12:54:00] 2025-11-20 17:53:28,149 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 12:54:00] 2025-11-20 17:53:28,149 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 12:54:00] 2025-11-20 17:53:28,150 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 12:54:00] 2025-11-20 17:53:28,150 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 12:54:00] 2025-11-20 17:53:28,150 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 12:54:00] 2025-11-20 17:53:28,150 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 12:54:00] 2025-11-20 17:53:28,150 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 12:54:00] 2025-11-20 17:53:28,151 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 12:54:00] 2025-11-20 17:53:28,151 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 12:54:00] 2025-11-20 17:53:28,151 | INFO     | job 6891558320 has completed (purged errors)
[2025-11-20 12:54:00] 2025-11-20 17:53:28,151 | INFO     | overall cleanup function is called
[2025-11-20 12:54:00] 2025-11-20 17:53:29,167 | INFO     | --- collectZombieJob: --- 10, [12082]
[2025-11-20 12:54:00] 2025-11-20 17:53:29,167 | INFO     | zombie collector waiting for pid 12082
[2025-11-20 12:54:00] 2025-11-20 17:53:29,168 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 12:54:00] 2025-11-20 17:53:29,168 | INFO     | collected zombie processes
[2025-11-20 12:54:00] 2025-11-20 17:53:29,168 | INFO     | will attempt to kill all subprocesses of pid=12082
[2025-11-20 12:54:00] 2025-11-20 17:53:29,256 | INFO     | process IDs to be killed: [12082] (in reverse order)
[2025-11-20 12:54:00] 2025-11-20 17:53:29,312 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 12:54:00] 2025-11-20 17:53:29,313 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 12:54:00] 2025-11-20 17:53:29,317 | INFO     | did not find any defunct processes belonging to 12082
[2025-11-20 12:54:00] 2025-11-20 17:53:29,320 | INFO     | did not find any defunct processes belonging to 12082
[2025-11-20 12:54:00] 2025-11-20 17:53:29,323 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 12:54:00] 2025-11-20 17:53:29,324 | INFO     | ready for new job
[2025-11-20 12:54:00] 2025-11-20 17:53:29,324 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 12:54:00] 2025-11-20 17:53:29,328 | INFO     | ***************************************
[2025-11-20 12:54:00] 2025-11-20 17:53:29,329 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 12:54:00] 2025-11-20 17:53:29,329 | INFO     | ***************************************
[2025-11-20 12:54:00] 2025-11-20 17:53:29,329 | INFO     | 
[2025-11-20 12:54:00] 2025-11-20 17:53:29,329 | INFO     | architecture information:
[2025-11-20 12:54:00] 2025-11-20 17:53:29,330 | INFO     | executing command: cat /etc/os-release
[2025-11-20 12:54:00] 2025-11-20 17:53:29,349 | INFO     | cat /etc/os-release:
[2025-11-20 12:54:00] NAME="CentOS Linux"
[2025-11-20 12:54:00] VERSION="7 (Core)"
[2025-11-20 12:54:00] ID="centos"
[2025-11-20 12:54:00] ID_LIKE="rhel fedora"
[2025-11-20 12:54:00] VERSION_ID="7"
[2025-11-20 12:54:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 12:54:00] ANSI_COLOR="0;31"
[2025-11-20 12:54:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 12:54:00] HOME_URL="https://www.centos.org/"
[2025-11-20 12:54:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 12:54:00] 
[2025-11-20 12:54:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 12:54:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 12:54:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 12:54:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 12:54:00] 
[2025-11-20 12:54:00] 2025-11-20 17:53:29,350 | INFO     | ***************************************
[2025-11-20 12:54:00] 2025-11-20 17:53:29,853 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-20 12:54:00] 2025-11-20 17:53:29,930 | INFO     | sufficient remaining disk space (17428381696 B)
[2025-11-20 12:54:00] 2025-11-20 17:53:29,931 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 12:54:00] 2025-11-20 17:53:29,931 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 12:54:00] 2025-11-20 17:53:29,932 | INFO     | update_server=False
[2025-11-20 12:54:00] 2025-11-20 17:53:29,932 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 12:54:00] 2025-11-20 17:53:29,932 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 12:54:00] 2025-11-20 17:53:29,933 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 12:54:00] 2025-11-20 17:53:29,933 | INFO     | aborting loop
[2025-11-20 12:54:00] 2025-11-20 17:53:30,349 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 12:54:00] 2025-11-20 17:53:30,436 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 12:54:00] 2025-11-20 17:53:30,867 | INFO     | all data control threads have been joined
[2025-11-20 12:54:00] 2025-11-20 17:53:30,937 | INFO     | [job] retrieve thread has finished
[2025-11-20 12:54:00] 2025-11-20 17:53:30,938 | INFO     | [job] queue monitor thread has finished
[2025-11-20 12:54:00] 2025-11-20 17:53:30,938 | INFO     | [job] job monitor thread has finished
[2025-11-20 12:54:00] 2025-11-20 17:53:31,249 | INFO     | all job control threads have been joined
[2025-11-20 12:54:00] 2025-11-20 17:53:31,272 | INFO     | all payload control threads have been joined
[2025-11-20 12:54:00] 2025-11-20 17:53:31,429 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 12:54:00] 2025-11-20 17:53:31,595 | INFO     | [monitor] cgroup control has ended
[2025-11-20 12:54:00] 2025-11-20 17:53:31,852 | INFO     | [job] validate thread has finished
[2025-11-20 12:54:00] 2025-11-20 17:53:31,857 | INFO     | [payload] failed_post thread has finished
[2025-11-20 12:54:00] 2025-11-20 17:53:31,872 | INFO     | [data] control thread has finished
[2025-11-20 12:54:00] 2025-11-20 17:53:31,949 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 12:54:00] 2025-11-20 17:53:32,004 | INFO     | [data] copytool_in thread has finished
[2025-11-20 12:54:00] 2025-11-20 17:53:32,084 | INFO     | [payload] validate_post thread has finished
[2025-11-20 12:54:00] 2025-11-20 17:53:32,249 | INFO     | [job] control thread has finished
[2025-11-20 12:54:00] 2025-11-20 17:53:32,268 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 12:54:00] 2025-11-20 17:53:32,275 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 12:54:00] 2025-11-20 17:53:32,277 | INFO     | [payload] control thread has finished
[2025-11-20 12:54:00] 2025-11-20 17:53:32,354 | INFO     | [data] copytool_out thread has finished
[2025-11-20 12:54:00] 2025-11-20 17:53:34,442 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 12:54:00] 2025-11-20 17:53:35,807 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140630640125760)>', '<ExcThread(monitor, started 140629870880512)>']
[2025-11-20 12:54:00] 2025-11-20 17:53:40,832 | INFO     | all workflow threads have been joined
[2025-11-20 12:54:00] 2025-11-20 17:53:40,833 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 12:54:00] 2025-11-20 17:53:40,833 | INFO     | traces error code: 0
[2025-11-20 12:54:00] 2025-11-20 17:53:40,834 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 12:54:00] 2025-11-20 17:54:00,502 | INFO     | PID=4654 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-20 12:54:00] 2025-11-20 17:54:00,503 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 12:54:00] 2025-11-20 17:54:00,503 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 12:54:00] 2025-11-20 17:54:00,503 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 12:54:00] 2025-11-20 17:54:00,503 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 12:54:00] 2025-11-20 17:54:00,503 | INFO     | [monitor] control thread has ended
[2025-11-20 12:54:00] 2025-11-20 17:54:00,621 [wrapper] ==== pilot stdout END ====
[2025-11-20 12:54:00] 2025-11-20 17:54:00,626 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 12:54:00] 2025-11-20 17:54:00,631 [wrapper] pilotpid: 4654
[2025-11-20 12:54:00] 2025-11-20 17:54:00,635 [wrapper] Pilot exit status: 0
[2025-11-20 12:54:00] 2025-11-20 17:54:00,653 [wrapper] pandaids: 6891558320
[2025-11-20 12:54:00] 2025-11-20 17:54:00,701 [wrapper] cleanup supervisor_pilot 21642 4655
[2025-11-20 12:54:00] 2025-11-20 17:54:00,707 [wrapper] Test setup, not cleaning
[2025-11-20 12:54:00] 2025-11-20 17:54:00,712 [wrapper] apfmon messages muted
[2025-11-20 12:54:00] 2025-11-20 17:54:00,717 [wrapper] ==== wrapper stdout END ====
[2025-11-20 12:54:00] 2025-11-20 17:54:00,722 [wrapper] ==== wrapper stderr END ====
[2025-11-20 12:54:00]  *** Error codes and diagnostics ***
[2025-11-20 12:54:00]     "exeErrorCode": 0,
[2025-11-20 12:54:00]     "exeErrorDiag": "",
[2025-11-20 12:54:00]     "pilotErrorCode": 0,
[2025-11-20 12:54:00]     "pilotErrorDiag": "",
[2025-11-20 12:54:00]  *** Listing of results directory ***
[2025-11-20 12:54:00] total 1322492
[2025-11-20 12:54:00] -rw-r--r-- 1 boincer umatlas    576529 Nov 18 10:15 pilot3.tar.gz
[2025-11-20 12:54:00] -rwx------ 1 boincer umatlas     36292 Nov 18 10:23 runpilot2-wrapper.sh
[2025-11-20 12:54:00] -rw-r--r-- 1 boincer umatlas      5112 Nov 18 10:23 queuedata.json
[2025-11-20 12:54:00] -rw-r--r-- 1 boincer umatlas       100 Nov 20 00:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 12:54:00] -rwxr-xr-x 1 boincer umatlas      7986 Nov 20 00:27 run_atlas
[2025-11-20 12:54:00] -rw-r--r-- 1 boincer umatlas       105 Nov 20 00:27 job.xml
[2025-11-20 12:54:00] -rw-r--r-- 2 boincer umatlas 409470929 Nov 20 00:27 EVNT.47493065._000053.pool.root.1
[2025-11-20 12:54:00] -rw-r--r-- 2 boincer umatlas     15120 Nov 20 00:27 start_atlas.sh
[2025-11-20 12:54:00] drwxrwx--x 2 boincer umatlas      4096 Nov 20 00:27 shared
[2025-11-20 12:54:00] -rw-r--r-- 2 boincer umatlas    590091 Nov 20 00:27 input.tar.gz
[2025-11-20 12:54:00] -rw-r--r-- 1 boincer umatlas         0 Nov 20 00:27 boinc_lockfile
[2025-11-20 12:54:00] -rw-r--r-- 1 boincer umatlas      2771 Nov 20 00:27 pandaJob.out
[2025-11-20 12:54:00] -rw------- 1 boincer umatlas    989427 Nov 20 00:28 agis_schedconf.cvmfs.json
[2025-11-20 12:54:00] drwx------ 5 boincer umatlas      4096 Nov 20 00:28 pilot3
[2025-11-20 12:54:00] -rw-r--r-- 1 boincer umatlas       532 Nov 20 12:42 boinc_task_state.xml
[2025-11-20 12:54:00] -rw-r--r-- 1 boincer umatlas      5912 Nov 20 12:46 init_data.xml
[2025-11-20 12:54:00] -rw------- 1 boincer umatlas 924583160 Nov 20 12:52 HITS.47493068._000522.pool.root.1
[2025-11-20 12:54:00] -rw------- 1 boincer umatlas      1062 Nov 20 12:53 memory_monitor_summary.json
[2025-11-20 12:54:00] -rw------- 1 boincer umatlas   1526164 Nov 20 12:53 agis_ddmendpoints.agis.ALL.json
[2025-11-20 12:54:00] -rw------- 1 boincer umatlas   1976269 Nov 20 12:53 log.47493068._000522.job.log.tgz.1
[2025-11-20 12:54:00] -rw------- 1 boincer umatlas        95 Nov 20 12:53 pilot_heartbeat.json
[2025-11-20 12:54:00] -rw------- 1 boincer umatlas      8656 Nov 20 12:53 heartbeat.json
[2025-11-20 12:54:00] -rw-r--r-- 1 boincer umatlas      8192 Nov 20 12:53 boinc_mmap_file
[2025-11-20 12:54:00] -rw-r--r-- 1 boincer umatlas        29 Nov 20 12:53 wrapper_checkpoint.txt
[2025-11-20 12:54:00] -rw------- 1 boincer umatlas       744 Nov 20 12:54 pilotlog.txt
[2025-11-20 12:54:00] -rw------- 1 boincer umatlas   6152479 Nov 20 12:54 log.47493068._000522.job.log.1
[2025-11-20 12:54:00] -rw------- 1 boincer umatlas       353 Nov 20 12:54 output.list
[2025-11-20 12:54:00] -rw-r--r-- 1 boincer umatlas       620 Nov 20 12:54 runtime_log
[2025-11-20 12:54:00] -rw------- 1 boincer umatlas   8151040 Nov 20 12:54 result.tar.gz
[2025-11-20 12:54:00] -rw-r--r-- 1 boincer umatlas      8704 Nov 20 12:54 runtime_log.err
[2025-11-20 12:54:00] -rw------- 1 boincer umatlas       668 Nov 20 12:54 OkdMDmTjcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmGJFKDm5iBXOn.diag
[2025-11-20 12:54:00] -rw-r--r-- 1 boincer umatlas     21311 Nov 20 12:54 stderr.txt
[2025-11-20 12:54:00] HITS file was successfully produced:
[2025-11-20 12:54:00] -rw------- 1 boincer umatlas 924583160 Nov 20 12:52 shared/HITS.pool.root.1
[2025-11-20 12:54:00]  *** Contents of shared directory: ***
[2025-11-20 12:54:00] total 1311352
[2025-11-20 12:54:00] -rw-r--r-- 2 boincer umatlas 409470929 Nov 20 00:27 ATLAS.root_0
[2025-11-20 12:54:00] -rw-r--r-- 2 boincer umatlas     15120 Nov 20 00:27 start_atlas.sh
[2025-11-20 12:54:00] -rw-r--r-- 2 boincer umatlas    590091 Nov 20 00:27 input.tar.gz
[2025-11-20 12:54:00] -rw------- 1 boincer umatlas 924583160 Nov 20 12:52 HITS.pool.root.1
[2025-11-20 12:54:00] -rw------- 1 boincer umatlas   8151040 Nov 20 12:54 result.tar.gz
12:54:02 (819): run_atlas exited; CPU time 343748.061984
12:54:02 (819): called boinc_finish(0)

</stderr_txt>
]]>

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