Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
20:17:57 (1785973): wrapper (7.7.26015): starting
20:17:57 (1785973): wrapper: running run_atlas (--nthreads 4)
[2025-11-26 20:17:57] Arguments: --nthreads 4
[2025-11-26 20:17:57] Threads: 4
[2025-11-26 20:17:57] Checking for CVMFS
[2025-11-26 20:17:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 20:17:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 20:17:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 20:17:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 20:17:58] 2.13.2.0 863474 3802 48768 153334 2 56 3411800 4194304 668 130560 0 2609160 99.990 126473 83 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://192.168.1.253:3128 1
[2025-11-26 20:17:58] CVMFS is ok
[2025-11-26 20:17:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 20:17:58] Checking for apptainer binary...
[2025-11-26 20:17:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 20:17:58] Running /usr/bin/apptainer --version
[2025-11-26 20:17:58] apptainer version 1.3.4
[2025-11-26 20:17:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 20:17:58] rubble
[2025-11-26 20:17:58] apptainer works
[2025-11-26 20:17:58] Set ATHENA_PROC_NUMBER=4
[2025-11-26 20:17:58] Set ATHENA_CORE_NUMBER=4
[2025-11-26 20:17:58] Starting ATLAS job with PandaID=6890968505
[2025-11-26 20:17:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 06:48:19]  *** The last 200 lines of the pilot log: ***
[2025-11-27 06:48:19] 2025-11-27 06:47:32,762 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 06:48:19] 2025-11-27 06:47:32,762 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 06:48:19] 2025-11-27 06:47:32,768 | INFO     | fitting pss+swap vs Time
[2025-11-27 06:48:19] 2025-11-27 06:47:32,769 | INFO     | sum of square deviations: 73544293764.98593
[2025-11-27 06:48:19] 2025-11-27 06:47:32,774 | INFO     | sum of deviations: 336621267333.06287
[2025-11-27 06:48:19] 2025-11-27 06:47:32,774 | INFO     | mean x: 1764207163.0048466
[2025-11-27 06:48:19] 2025-11-27 06:47:32,774 | INFO     | mean y: 2257802.9789983844
[2025-11-27 06:48:19] 2025-11-27 06:47:32,774 | INFO     | intersect: -8072735111.447454
[2025-11-27 06:48:19] 2025-11-27 06:47:32,775 | INFO     | chi2: 7.006762847054858
[2025-11-27 06:48:19] 2025-11-27 06:47:32,775 | INFO     | sum of square deviations: 71776475487.48532
[2025-11-27 06:48:19] 2025-11-27 06:47:32,781 | INFO     | sum of deviations: 474653166718.2109
[2025-11-27 06:48:19] 2025-11-27 06:47:32,781 | INFO     | mean x: 1764207010.504886
[2025-11-27 06:48:19] 2025-11-27 06:47:32,781 | INFO     | mean y: 2269714.0960912053
[2025-11-27 06:48:19] 2025-11-27 06:47:32,781 | INFO     | intersect: -11664316567.764679
[2025-11-27 06:48:19] 2025-11-27 06:47:32,781 | INFO     | chi2: 4.778530307162506
[2025-11-27 06:48:19] 2025-11-27 06:47:32,781 | INFO     | current chi2=4.778530307162506 (change=31.80116964896196 %)
[2025-11-27 06:48:19] 2025-11-27 06:47:32,782 | INFO     | sum of square deviations: 70037215884.98526
[2025-11-27 06:48:19] 2025-11-27 06:47:32,787 | INFO     | sum of deviations: 515844980577.04395
[2025-11-27 06:48:19] 2025-11-27 06:47:32,787 | INFO     | mean x: 1764206858.0049262
[2025-11-27 06:48:19] 2025-11-27 06:47:32,787 | INFO     | mean y: 2273302.318555008
[2025-11-27 06:48:19] 2025-11-27 06:47:32,787 | INFO     | intersect: -12991636305.623741
[2025-11-27 06:48:19] 2025-11-27 06:47:32,788 | INFO     | chi2: 4.004983269324016
[2025-11-27 06:48:19] 2025-11-27 06:47:32,788 | INFO     | current chi2=4.004983269324016 (change=16.18796969183236 %)
[2025-11-27 06:48:19] 2025-11-27 06:47:32,788 | INFO     | right removable region: 608
[2025-11-27 06:48:19] 2025-11-27 06:47:32,788 | INFO     | sum of square deviations: 71776473657.48534
[2025-11-27 06:48:19] 2025-11-27 06:47:32,794 | INFO     | sum of deviations: 188101077271.6445
[2025-11-27 06:48:19] 2025-11-27 06:47:32,794 | INFO     | mean x: 1764207315.504886
[2025-11-27 06:48:19] 2025-11-27 06:47:32,794 | INFO     | mean y: 2270605.2850162867
[2025-11-27 06:48:19] 2025-11-27 06:47:32,794 | INFO     | intersect: -4621100809.707556
[2025-11-27 06:48:19] 2025-11-27 06:47:32,794 | INFO     | chi2: 4.4758967315362606
[2025-11-27 06:48:19] 2025-11-27 06:47:32,794 | INFO     | current chi2=4.4758967315362606 (change=36.12033360858493 %)
[2025-11-27 06:48:19] 2025-11-27 06:47:32,795 | INFO     | sum of square deviations: 70037212224.98526
[2025-11-27 06:48:19] 2025-11-27 06:47:32,800 | INFO     | sum of deviations: 75454683809.74382
[2025-11-27 06:48:19] 2025-11-27 06:47:32,800 | INFO     | mean x: 1764207468.0049262
[2025-11-27 06:48:19] 2025-11-27 06:47:32,800 | INFO     | mean y: 2280475.0853858786
[2025-11-27 06:48:19] 2025-11-27 06:47:32,800 | INFO     | intersect: -1898390788.7204523
[2025-11-27 06:48:19] 2025-11-27 06:47:32,801 | INFO     | chi2: 3.0874743686423076
[2025-11-27 06:48:19] 2025-11-27 06:47:32,801 | INFO     | current chi2=3.0874743686423076 (change=31.019982054353722 %)
[2025-11-27 06:48:19] 2025-11-27 06:47:32,801 | INFO     | sum of square deviations: 68326276904.985176
[2025-11-27 06:48:19] 2025-11-27 06:47:32,806 | INFO     | sum of deviations: 63803693873.867355
[2025-11-27 06:48:19] 2025-11-27 06:47:32,806 | INFO     | mean x: 1764207620.504967
[2025-11-27 06:48:19] 2025-11-27 06:47:32,806 | INFO     | mean y: 2281512.377483444
[2025-11-27 06:48:19] 2025-11-27 06:47:32,806 | INFO     | intersect: -1645151481.8887405
[2025-11-27 06:48:19] 2025-11-27 06:47:32,807 | INFO     | chi2: 3.079308147277495
[2025-11-27 06:48:19] 2025-11-27 06:47:32,807 | INFO     | current chi2=3.079308147277495 (change=0.26449519541773076 %)
[2025-11-27 06:48:19] 2025-11-27 06:47:32,807 | INFO     | left removable region: 30
[2025-11-27 06:48:19] 2025-11-27 06:47:32,807 | INFO     | sum of square deviations: 59877110140.4982
[2025-11-27 06:48:19] 2025-11-27 06:47:32,812 | INFO     | sum of deviations: 217189778419.51212
[2025-11-27 06:48:19] 2025-11-27 06:47:32,812 | INFO     | mean x: 1764207742.5017302
[2025-11-27 06:48:19] 2025-11-27 06:47:32,812 | INFO     | mean y: 2300112.4878892736
[2025-11-27 06:48:19] 2025-11-27 06:47:32,812 | INFO     | intersect: -6396938056.836866
[2025-11-27 06:48:19] 2025-11-27 06:47:32,813 | INFO     | chi2: 0.0342174510400948
[2025-11-27 06:48:19] 2025-11-27 06:47:32,813 | INFO     | current memory leak: 3.63 B/s (using 578 data points, chi2=0.03)
[2025-11-27 06:48:19] 2025-11-27 06:47:32,813 | INFO     | could have reported an average CPU frequency of 4030 MHz (24 samples)
[2025-11-27 06:48:19] 2025-11-27 06:47:32,813 | INFO     | ..............................
[2025-11-27 06:48:19] 2025-11-27 06:47:32,813 | INFO     | . Timing measurements:
[2025-11-27 06:48:19] 2025-11-27 06:47:32,813 | INFO     | . get job = 0 s
[2025-11-27 06:48:19] 2025-11-27 06:47:32,813 | INFO     | . initial setup = 6 s
[2025-11-27 06:48:19] 2025-11-27 06:47:32,814 | INFO     | . payload setup = 6 s
[2025-11-27 06:48:19] 2025-11-27 06:47:32,814 | INFO     | . stage-in = 0 s
[2025-11-27 06:48:19] 2025-11-27 06:47:32,814 | INFO     | . payload execution = 37725 s
[2025-11-27 06:48:19] 2025-11-27 06:47:32,814 | INFO     | . stage-out = 5 s
[2025-11-27 06:48:19] 2025-11-27 06:47:32,814 | INFO     | . log creation = 0 s
[2025-11-27 06:48:19] 2025-11-27 06:47:32,814 | INFO     | ..............................
[2025-11-27 06:48:19] 2025-11-27 06:47:32,868 | INFO     | 
[2025-11-27 06:48:19] 2025-11-27 06:47:32,868 | INFO     | job summary report
[2025-11-27 06:48:19] 2025-11-27 06:47:32,868 | INFO     | --------------------------------------------------
[2025-11-27 06:48:19] 2025-11-27 06:47:32,868 | INFO     | PanDA job id: 6890968505
[2025-11-27 06:48:19] 2025-11-27 06:47:32,868 | INFO     | task id: 47483661
[2025-11-27 06:48:19] 2025-11-27 06:47:32,868 | INFO     | errors: (none)
[2025-11-27 06:48:19] 2025-11-27 06:47:32,868 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 06:48:19] 2025-11-27 06:47:32,868 | INFO     | pilot state: finished 
[2025-11-27 06:48:19] 2025-11-27 06:47:32,868 | INFO     | transexitcode: 0
[2025-11-27 06:48:19] 2025-11-27 06:47:32,868 | INFO     | exeerrorcode: 0
[2025-11-27 06:48:19] 2025-11-27 06:47:32,868 | INFO     | exeerrordiag: 
[2025-11-27 06:48:19] 2025-11-27 06:47:32,869 | INFO     | exitcode: 0
[2025-11-27 06:48:19] 2025-11-27 06:47:32,869 | INFO     | exitmsg: OK
[2025-11-27 06:48:19] 2025-11-27 06:47:32,869 | INFO     | cpuconsumptiontime: 145936 s
[2025-11-27 06:48:19] 2025-11-27 06:47:32,869 | INFO     | nevents: 1000
[2025-11-27 06:48:19] 2025-11-27 06:47:32,869 | INFO     | neventsw: 0
[2025-11-27 06:48:19] 2025-11-27 06:47:32,869 | INFO     | pid: 1796146
[2025-11-27 06:48:19] 2025-11-27 06:47:32,869 | INFO     | pgrp: 1796146
[2025-11-27 06:48:19] 2025-11-27 06:47:32,869 | INFO     | corecount: 4
[2025-11-27 06:48:19] 2025-11-27 06:47:32,869 | INFO     | event service: False
[2025-11-27 06:48:19] 2025-11-27 06:47:32,869 | INFO     | sizes: {0: 2284311, 2: 2284573, 10: 2284601, 37735: 2327509, 37736: 2327508, 37741: 2336572, 37742: 2336756, 37749: 2337002}
[2025-11-27 06:48:19] 2025-11-27 06:47:32,869 | INFO     | --------------------------------------------------
[2025-11-27 06:48:19] 2025-11-27 06:47:32,869 | INFO     | 
[2025-11-27 06:48:19] 2025-11-27 06:47:32,869 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/4
[2025-11-27 06:48:19] 2025-11-27 06:47:32,888 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 06:48:19] 2025-11-27 06:47:32,888 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 06:48:19] 2025-11-27 06:47:32,888 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 06:48:19] 2025-11-27 06:47:32,888 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 06:48:19] 2025-11-27 06:47:32,888 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 06:48:19] 2025-11-27 06:47:32,889 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 06:48:19] 2025-11-27 06:47:32,889 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 06:48:19] 2025-11-27 06:47:32,889 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 06:48:19] 2025-11-27 06:47:32,889 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 06:48:19] 2025-11-27 06:47:32,889 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 06:48:19] 2025-11-27 06:47:32,889 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 06:48:19] 2025-11-27 06:47:32,889 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 06:48:19] 2025-11-27 06:47:32,889 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 06:48:19] 2025-11-27 06:47:32,889 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 06:48:19] 2025-11-27 06:47:32,889 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 06:48:19] 2025-11-27 06:47:32,889 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 06:48:19] 2025-11-27 06:47:32,889 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 06:48:19] 2025-11-27 06:47:32,889 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 06:48:19] 2025-11-27 06:47:32,889 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 06:48:19] 2025-11-27 06:47:32,889 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 06:48:19] 2025-11-27 06:47:32,889 | INFO     | job 6890968505 has completed (purged errors)
[2025-11-27 06:48:19] 2025-11-27 06:47:32,890 | INFO     | overall cleanup function is called
[2025-11-27 06:48:19] 2025-11-27 06:47:33,901 | INFO     | --- collectZombieJob: --- 10, [1796146]
[2025-11-27 06:48:19] 2025-11-27 06:47:33,902 | INFO     | zombie collector waiting for pid 1796146
[2025-11-27 06:48:19] 2025-11-27 06:47:33,902 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 06:48:19] 2025-11-27 06:47:33,902 | INFO     | collected zombie processes
[2025-11-27 06:48:19] 2025-11-27 06:47:33,902 | INFO     | will attempt to kill all subprocesses of pid=1796146
[2025-11-27 06:48:19] 2025-11-27 06:47:33,951 | INFO     | process IDs to be killed: [1796146] (in reverse order)
[2025-11-27 06:48:19] 2025-11-27 06:47:33,985 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 06:48:19] 2025-11-27 06:47:33,985 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 06:48:19] 2025-11-27 06:47:33,987 | INFO     | did not find any defunct processes belonging to 1796146
[2025-11-27 06:48:19] 2025-11-27 06:47:33,988 | INFO     | did not find any defunct processes belonging to 1796146
[2025-11-27 06:48:19] 2025-11-27 06:47:33,990 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 06:48:19] 2025-11-27 06:47:33,990 | INFO     | ready for new job
[2025-11-27 06:48:19] 2025-11-27 06:47:33,990 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 06:48:19] 2025-11-27 06:47:33,993 | INFO     | ***************************************
[2025-11-27 06:48:19] 2025-11-27 06:47:33,993 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 06:48:19] 2025-11-27 06:47:33,993 | INFO     | ***************************************
[2025-11-27 06:48:19] 2025-11-27 06:47:33,993 | INFO     | 
[2025-11-27 06:48:19] 2025-11-27 06:47:33,994 | INFO     | architecture information:
[2025-11-27 06:48:19] 2025-11-27 06:47:33,994 | INFO     | executing command: cat /etc/os-release
[2025-11-27 06:48:19] 2025-11-27 06:47:34,010 | INFO     | cat /etc/os-release:
[2025-11-27 06:48:19] NAME="CentOS Linux"
[2025-11-27 06:48:19] VERSION="7 (Core)"
[2025-11-27 06:48:19] ID="centos"
[2025-11-27 06:48:19] ID_LIKE="rhel fedora"
[2025-11-27 06:48:19] VERSION_ID="7"
[2025-11-27 06:48:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 06:48:19] ANSI_COLOR="0;31"
[2025-11-27 06:48:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 06:48:19] HOME_URL="https://www.centos.org/"
[2025-11-27 06:48:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 06:48:19] 
[2025-11-27 06:48:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 06:48:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 06:48:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 06:48:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 06:48:19] 
[2025-11-27 06:48:19] 2025-11-27 06:47:34,010 | INFO     | ***************************************
[2025-11-27 06:48:19] 2025-11-27 06:47:34,513 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/4
[2025-11-27 06:48:19] 2025-11-27 06:47:34,530 | INFO     | sufficient remaining disk space (246772924416 B)
[2025-11-27 06:48:19] 2025-11-27 06:47:34,530 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 06:48:19] 2025-11-27 06:47:34,530 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 06:48:19] 2025-11-27 06:47:34,530 | INFO     | update_server=False
[2025-11-27 06:48:19] 2025-11-27 06:47:34,530 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 06:48:19] 2025-11-27 06:47:34,531 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:48:19] 2025-11-27 06:47:34,531 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:48:19] 2025-11-27 06:47:34,531 | INFO     | aborting loop
[2025-11-27 06:48:19] 2025-11-27 06:47:34,937 | INFO     | all data control threads have been joined
[2025-11-27 06:48:19] 2025-11-27 06:47:35,536 | INFO     | [job] retrieve thread has finished
[2025-11-27 06:48:19] 2025-11-27 06:47:35,536 | INFO     | [job] queue monitor thread has finished
[2025-11-27 06:48:19] 2025-11-27 06:47:35,536 | INFO     | [job] job monitor thread has finished
[2025-11-27 06:48:19] 2025-11-27 06:47:35,566 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 06:48:19] 2025-11-27 06:47:35,582 | INFO     | [job] validate thread has finished
[2025-11-27 06:48:19] 2025-11-27 06:47:35,622 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 06:48:19] 2025-11-27 06:47:35,679 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 06:48:19] 2025-11-27 06:47:35,682 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 06:48:19] 2025-11-27 06:47:35,773 | INFO     | all job control threads have been joined
[2025-11-27 06:48:19] 2025-11-27 06:47:35,785 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 06:48:19] 2025-11-27 06:47:35,942 | INFO     | [data] control thread has finished
[2025-11-27 06:48:19] 2025-11-27 06:47:35,973 | INFO     | all payload control threads have been joined
[2025-11-27 06:48:19] 2025-11-27 06:47:36,262 | INFO     | [data] copytool_in thread has finished
[2025-11-27 06:48:19] 2025-11-27 06:47:36,383 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 06:48:19] 2025-11-27 06:47:36,444 | INFO     | [payload] failed_post thread has finished
[2025-11-27 06:48:19] 2025-11-27 06:47:36,778 | INFO     | [job] control thread has finished
[2025-11-27 06:48:19] 2025-11-27 06:47:36,903 | INFO     | [payload] validate_post thread has finished
[2025-11-27 06:48:19] 2025-11-27 06:47:36,979 | INFO     | [payload] control thread has finished
[2025-11-27 06:48:19] 2025-11-27 06:47:37,571 | INFO     | [data] copytool_out thread has finished
[2025-11-27 06:48:19] 2025-11-27 06:47:40,389 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 06:48:19] 2025-11-27 06:48:05,379 | INFO     | PID=1789699 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 06:48:19] 2025-11-27 06:48:05,379 | INFO     | .. there are 2 such processes running
[2025-11-27 06:48:19] 2025-11-27 06:48:05,379 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 06:48:19] 2025-11-27 06:48:05,379 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 06:48:19] 2025-11-27 06:48:05,379 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 06:48:19] 2025-11-27 06:48:13,118 | INFO     | [monitor] cgroup control has ended
[2025-11-27 06:48:19] 2025-11-27 06:48:14,080 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135181666613056)>', '<ExcThread(monitor, started 135180706625280)>']
[2025-11-27 06:48:19] 2025-11-27 06:48:14,424 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 06:48:19] 2025-11-27 06:48:14,424 | INFO     | [monitor] control thread has ended
[2025-11-27 06:48:19] 2025-11-27 06:48:19,106 | INFO     | all workflow threads have been joined
[2025-11-27 06:48:19] 2025-11-27 06:48:19,108 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 06:48:19] 2025-11-27 06:48:19,108 | INFO     | traces error code: 0
[2025-11-27 06:48:19] 2025-11-27 06:48:19,108 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 06:48:19] 2025-11-27 06:48:19,179 [wrapper] ==== pilot stdout END ====
[2025-11-27 06:48:19] 2025-11-27 06:48:19,181 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 06:48:19] 2025-11-27 06:48:19,182 [wrapper] pilotpid: 1789699
[2025-11-27 06:48:19] 2025-11-27 06:48:19,184 [wrapper] Pilot exit status: 0
[2025-11-27 06:48:19] 2025-11-27 06:48:19,191 [wrapper] pandaids: 6890968505
[2025-11-27 06:48:19] 2025-11-27 06:48:19,215 [wrapper] cleanup supervisor_pilot 1927867 1789700
[2025-11-27 06:48:19] 2025-11-27 06:48:19,217 [wrapper] Test setup, not cleaning
[2025-11-27 06:48:19] 2025-11-27 06:48:19,220 [wrapper] apfmon messages muted
[2025-11-27 06:48:19] 2025-11-27 06:48:19,222 [wrapper] ==== wrapper stdout END ====
[2025-11-27 06:48:19] 2025-11-27 06:48:19,224 [wrapper] ==== wrapper stderr END ====
[2025-11-27 06:48:19]  *** Error codes and diagnostics ***
[2025-11-27 06:48:19]     "exeErrorCode": 0,
[2025-11-27 06:48:19]     "exeErrorDiag": "",
[2025-11-27 06:48:19]     "pilotErrorCode": 0,
[2025-11-27 06:48:19]     "pilotErrorDiag": "",
[2025-11-27 06:48:19]  *** Listing of results directory ***
[2025-11-27 06:48:19] total 1321624
[2025-11-27 06:48:19] -rw-r--r-- 1 boinc boinc    576529 Nov 18 03:56 pilot3.tar.gz
[2025-11-27 06:48:19] -rwx------ 1 boinc boinc     36292 Nov 18 04:02 runpilot2-wrapper.sh
[2025-11-27 06:48:19] -rw-r--r-- 1 boinc boinc      5112 Nov 18 04:02 queuedata.json
[2025-11-27 06:48:19] -rw-r--r-- 1 boinc boinc       100 Nov 26 20:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 06:48:19] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 20:17 run_atlas
[2025-11-27 06:48:19] -rw-r--r-- 1 boinc boinc       105 Nov 26 20:17 job.xml
[2025-11-27 06:48:19] -rw-r--r-- 2 boinc boinc 410579558 Nov 26 20:17 EVNT.47483658._000112.pool.root.1
[2025-11-27 06:48:19] -rw-r--r-- 1 boinc boinc      9738 Nov 26 20:17 init_data.xml
[2025-11-27 06:48:19] drwxrwx--x 2 boinc boinc      4096 Nov 26 20:17 shared
[2025-11-27 06:48:19] -rw-r--r-- 2 boinc boinc    590093 Nov 26 20:17 input.tar.gz
[2025-11-27 06:48:19] -rw-r--r-- 2 boinc boinc     15120 Nov 26 20:17 start_atlas.sh
[2025-11-27 06:48:19] -rw-r--r-- 1 boinc boinc         0 Nov 26 20:17 boinc_lockfile
[2025-11-27 06:48:19] -rw-r--r-- 1 boinc boinc      2773 Nov 26 20:17 pandaJob.out
[2025-11-27 06:48:19] -rw------- 1 boinc boinc    991538 Nov 26 20:18 agis_schedconf.cvmfs.json
[2025-11-27 06:48:19] drwx------ 5 boinc boinc      4096 Nov 26 20:18 pilot3
[2025-11-27 06:48:19] -rw-r--r-- 1 boinc boinc       532 Nov 27 06:39 boinc_task_state.xml
[2025-11-27 06:48:19] -rw------- 1 boinc boinc 925505285 Nov 27 06:46 HITS.47483661._001117.pool.root.1
[2025-11-27 06:48:19] -rw------- 1 boinc boinc      1023 Nov 27 06:47 memory_monitor_summary.json
[2025-11-27 06:48:19] -rw------- 1 boinc boinc        95 Nov 27 06:47 pilot_heartbeat.json
[2025-11-27 06:48:19] -rw------- 1 boinc boinc   1516240 Nov 27 06:47 agis_ddmendpoints.agis.ALL.json
[2025-11-27 06:48:19] -rw------- 1 boinc boinc   1403304 Nov 27 06:47 log.47483661._001117.job.log.tgz.1
[2025-11-27 06:48:19] -rw------- 1 boinc boinc      8546 Nov 27 06:47 heartbeat.json
[2025-11-27 06:48:19] -rw-r--r-- 1 boinc boinc        29 Nov 27 06:48 wrapper_checkpoint.txt
[2025-11-27 06:48:19] -rw-r--r-- 1 boinc boinc      8192 Nov 27 06:48 boinc_mmap_file
[2025-11-27 06:48:19] -rw------- 1 boinc boinc      4831 Nov 27 06:48 pilotlog.txt
[2025-11-27 06:48:19] -rw------- 1 boinc boinc   5262956 Nov 27 06:48 log.47483661._001117.job.log.1
[2025-11-27 06:48:19] -rw------- 1 boinc boinc       353 Nov 27 06:48 output.list
[2025-11-27 06:48:19] -rw-r--r-- 1 boinc boinc       620 Nov 27 06:48 runtime_log
[2025-11-27 06:48:19] -rw------- 1 boinc boinc   6686720 Nov 27 06:48 result.tar.gz
[2025-11-27 06:48:19] -rw-r--r-- 1 boinc boinc      8757 Nov 27 06:48 runtime_log.err
[2025-11-27 06:48:19] -rw------- 1 boinc boinc       651 Nov 27 06:48 MnONDmN6Rf8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm1CKODmYaP9on.diag
[2025-11-27 06:48:19] -rw-r--r-- 1 boinc boinc     20830 Nov 27 06:48 stderr.txt
[2025-11-27 06:48:19] HITS file was successfully produced:
[2025-11-27 06:48:19] -rw------- 1 boinc boinc 925505285 Nov 27 06:46 shared/HITS.pool.root.1
[2025-11-27 06:48:19]  *** Contents of shared directory: ***
[2025-11-27 06:48:19] total 1311912
[2025-11-27 06:48:19] -rw-r--r-- 2 boinc boinc 410579558 Nov 26 20:17 ATLAS.root_0
[2025-11-27 06:48:19] -rw-r--r-- 2 boinc boinc    590093 Nov 26 20:17 input.tar.gz
[2025-11-27 06:48:19] -rw-r--r-- 2 boinc boinc     15120 Nov 26 20:17 start_atlas.sh
[2025-11-27 06:48:19] -rw------- 1 boinc boinc 925505285 Nov 27 06:46 HITS.pool.root.1
[2025-11-27 06:48:19] -rw------- 1 boinc boinc   6686720 Nov 27 06:48 result.tar.gz
06:48:21 (1785973): run_atlas exited; CPU time 145752.732042
06:48:21 (1785973): called boinc_finish(0)

</stderr_txt>
]]>

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