Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:13:14 (24026): wrapper (7.7.26015): starting
01:13:14 (24026): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 01:13:14] Arguments: --nthreads 8
[2025-11-23 01:13:14] Threads: 8
[2025-11-23 01:13:14] Checking for CVMFS
[2025-11-23 01:13:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 01:13:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 01:13:15] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 01:13:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 01:13:16] 2.11.2.0 32329 280265 144344 153190 0 85 15698528 25165825 4632 130560 3 138909807 99.887 80528348 3137 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-23 01:13:16] CVMFS is ok
[2025-11-23 01:13:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 01:13:16] Checking for apptainer binary...
[2025-11-23 01:13:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 01:13:16] Running /usr/bin/apptainer --version
[2025-11-23 01:13:16] apptainer version 1.3.2-1.el7
[2025-11-23 01:13:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 01:13:22] cg-vwn362.simple-grid.lan
[2025-11-23 01:13:22] apptainer works
[2025-11-23 01:13:22] Set ATHENA_PROC_NUMBER=8
[2025-11-23 01:13:22] Set ATHENA_CORE_NUMBER=8
[2025-11-23 01:13:22] Starting ATLAS job with PandaID=6890933074
[2025-11-23 01:13:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 02:41:10]  *** The last 200 lines of the pilot log: ***
[2025-11-24 02:41:10] 2025-11-24 01:40:20,624 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 02:41:10] 2025-11-24 01:40:21,442 | INFO     | time since job start (91392s) is within the limit (172800.0s)
[2025-11-24 02:41:10] 2025-11-24 01:40:23,130 | INFO     | monitor loop #6157: job 0:6890933074 is in state 'finished'
[2025-11-24 02:41:10] 2025-11-24 01:40:23,130 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 02:41:10] 2025-11-24 01:40:23,449 | INFO     | time since job start (91394s) is within the limit (172800.0s)
[2025-11-24 02:41:10] 2025-11-24 01:40:25,461 | INFO     | time since job start (91396s) is within the limit (172800.0s)
[2025-11-24 02:41:10] 2025-11-24 01:40:25,635 | INFO     | monitor loop #6158: job 0:6890933074 is in state 'finished'
[2025-11-24 02:41:10] 2025-11-24 01:40:25,635 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 02:41:10] 2025-11-24 01:40:27,467 | INFO     | time since job start (91398s) is within the limit (172800.0s)
[2025-11-24 02:41:10] 2025-11-24 01:40:28,140 | INFO     | monitor loop #6159: job 0:6890933074 is in state 'finished'
[2025-11-24 02:41:10] 2025-11-24 01:40:28,140 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 02:41:10] 2025-11-24 01:40:29,474 | INFO     | time since job start (91400s) is within the limit (172800.0s)
[2025-11-24 02:41:10] 2025-11-24 01:40:30,646 | INFO     | monitor loop #6160: job 0:6890933074 is in state 'finished'
[2025-11-24 02:41:10] 2025-11-24 01:40:30,646 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 02:41:10] 2025-11-24 01:40:31,486 | INFO     | time since job start (91402s) is within the limit (172800.0s)
[2025-11-24 02:41:10] 2025-11-24 01:40:32,658 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 02:41:10] 2025-11-24 01:40:32,659 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-24 02:41:10] 2025-11-24 01:40:32,661 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6890933074/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 02:41:10] 2025-11-24 01:40:32,662 | INFO     | extracted standard info from prmon json
[2025-11-24 02:41:10] 2025-11-24 01:40:32,662 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 02:41:10] 2025-11-24 01:40:32,662 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 02:41:10] 2025-11-24 01:40:32,709 | INFO     | fitting pss+swap vs Time
[2025-11-24 02:41:10] 2025-11-24 01:40:32,711 | INFO     | sum of square deviations: 1021614935294.8854
[2025-11-24 02:41:10] 2025-11-24 01:40:32,800 | INFO     | sum of deviations: 3634515296365.9995
[2025-11-24 02:41:10] 2025-11-24 01:40:32,807 | INFO     | mean x: 1763902942.7829301
[2025-11-24 02:41:10] 2025-11-24 01:40:32,807 | INFO     | mean y: 2837455.362231183
[2025-11-24 02:41:10] 2025-11-24 01:40:32,807 | INFO     | intersect: -6272454736.7973
[2025-11-24 02:41:10] 2025-11-24 01:40:32,809 | INFO     | chi2: 27.05745123491758
[2025-11-24 02:41:10] 2025-11-24 01:40:32,811 | INFO     | sum of square deviations: 1011351548341.6283
[2025-11-24 02:41:10] 2025-11-24 01:40:32,896 | INFO     | sum of deviations: 4113954067974.4106
[2025-11-24 02:41:10] 2025-11-24 01:40:32,897 | INFO     | mean x: 1763902790.2872555
[2025-11-24 02:41:10] 2025-11-24 01:40:32,897 | INFO     | mean y: 2844577.8206338505
[2025-11-24 02:41:10] 2025-11-24 01:40:32,897 | INFO     | intersect: -7172321240.15113
[2025-11-24 02:41:10] 2025-11-24 01:40:32,899 | INFO     | chi2: 23.97432461582346
[2025-11-24 02:41:10] 2025-11-24 01:40:32,899 | INFO     | current chi2=23.97432461582346 (change=11.394741479254158 %)
[2025-11-24 02:41:10] 2025-11-24 01:40:32,899 | INFO     | right removable region: 1482
[2025-11-24 02:41:10] 2025-11-24 01:40:32,902 | INFO     | sum of square deviations: 1011350383851.6292
[2025-11-24 02:41:10] 2025-11-24 01:40:33,007 | INFO     | sum of deviations: 3007451171618.6367
[2025-11-24 02:41:10] 2025-11-24 01:40:33,007 | INFO     | mean x: 1763903095.2872555
[2025-11-24 02:41:10] 2025-11-24 01:40:33,007 | INFO     | mean y: 2846771.4093054617
[2025-11-24 02:41:10] 2025-11-24 01:40:33,007 | INFO     | intersect: -5242469308.20732
[2025-11-24 02:41:10] 2025-11-24 01:40:33,009 | INFO     | chi2: 22.264114598482845
[2025-11-24 02:41:10] 2025-11-24 01:40:33,009 | INFO     | current chi2=22.264114598482845 (change=17.715403401518266 %)
[2025-11-24 02:41:10] 2025-11-24 01:40:33,010 | INFO     | left removable region: 10
[2025-11-24 02:41:10] 2025-11-24 01:40:33,012 | INFO     | sum of square deviations: 989012243308.2656
[2025-11-24 02:41:10] 2025-11-24 01:40:33,069 | INFO     | sum of deviations: 3029555295090.8926
[2025-11-24 02:41:10] 2025-11-24 01:40:33,070 | INFO     | mean x: 1763903064.796875
[2025-11-24 02:41:10] 2025-11-24 01:40:33,070 | INFO     | mean y: 2863921.2805706523
[2025-11-24 02:41:10] 2025-11-24 01:40:33,070 | INFO     | intersect: -5400347116.94396
[2025-11-24 02:41:10] 2025-11-24 01:40:33,072 | INFO     | chi2: 14.732619863223512
[2025-11-24 02:41:10] 2025-11-24 01:40:33,072 | INFO     | current memory leak: 3.06 B/s (using 1472 data points, chi2=14.73)
[2025-11-24 02:41:10] 2025-11-24 01:40:33,075 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-24 02:41:10] 2025-11-24 01:40:33,075 | INFO     | ..............................
[2025-11-24 02:41:10] 2025-11-24 01:40:33,075 | INFO     | . Timing measurements:
[2025-11-24 02:41:10] 2025-11-24 01:40:33,075 | INFO     | . get job = 0 s
[2025-11-24 02:41:10] 2025-11-24 01:40:33,075 | INFO     | . initial setup = 7 s
[2025-11-24 02:41:10] 2025-11-24 01:40:33,076 | INFO     | . payload setup = 191 s
[2025-11-24 02:41:10] 2025-11-24 01:40:33,076 | INFO     | . stage-in = 0 s
[2025-11-24 02:41:10] 2025-11-24 01:40:33,076 | INFO     | . payload execution = 90888 s
[2025-11-24 02:41:10] 2025-11-24 01:40:33,076 | INFO     | . stage-out = 7 s
[2025-11-24 02:41:10] 2025-11-24 01:40:33,076 | INFO     | . log creation = 2 s
[2025-11-24 02:41:10] 2025-11-24 01:40:33,076 | INFO     | ..............................
[2025-11-24 02:41:10] 2025-11-24 01:40:33,208 | INFO     | 
[2025-11-24 02:41:10] 2025-11-24 01:40:33,208 | INFO     | job summary report
[2025-11-24 02:41:10] 2025-11-24 01:40:33,209 | INFO     | --------------------------------------------------
[2025-11-24 02:41:10] 2025-11-24 01:40:33,209 | INFO     | PanDA job id: 6890933074
[2025-11-24 02:41:10] 2025-11-24 01:40:33,209 | INFO     | task id: 47483661
[2025-11-24 02:41:10] 2025-11-24 01:40:33,209 | INFO     | errors: (none)
[2025-11-24 02:41:10] 2025-11-24 01:40:33,209 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 02:41:10] 2025-11-24 01:40:33,209 | INFO     | pilot state: finished 
[2025-11-24 02:41:10] 2025-11-24 01:40:33,209 | INFO     | transexitcode: 0
[2025-11-24 02:41:10] 2025-11-24 01:40:33,209 | INFO     | exeerrorcode: 0
[2025-11-24 02:41:10] 2025-11-24 01:40:33,209 | INFO     | exeerrordiag: 
[2025-11-24 02:41:10] 2025-11-24 01:40:33,209 | INFO     | exitcode: 0
[2025-11-24 02:41:10] 2025-11-24 01:40:33,210 | INFO     | exitmsg: OK
[2025-11-24 02:41:10] 2025-11-24 01:40:33,210 | INFO     | cpuconsumptiontime: 337416 s
[2025-11-24 02:41:10] 2025-11-24 01:40:33,210 | INFO     | nevents: 1000
[2025-11-24 02:41:10] 2025-11-24 01:40:33,210 | INFO     | neventsw: 0
[2025-11-24 02:41:10] 2025-11-24 01:40:33,210 | INFO     | pid: 2022
[2025-11-24 02:41:10] 2025-11-24 01:40:33,210 | INFO     | pgrp: 2022
[2025-11-24 02:41:10] 2025-11-24 01:40:33,210 | INFO     | corecount: 8
[2025-11-24 02:41:10] 2025-11-24 01:40:33,210 | INFO     | event service: False
[2025-11-24 02:41:10] 2025-11-24 01:40:33,210 | INFO     | sizes: {0: 2298621, 1: 2298820, 12: 2298820, 22: 2298848, 33: 2298876, 44: 2298932, 55: 2299088, 65: 2299116, 76: 2299144, 87: 2299200, 98: 2299228, 100: 2299798, 
[2025-11-24 02:41:10] 2025-11-24 01:40:33,210 | INFO     | --------------------------------------------------
[2025-11-24 02:41:10] 2025-11-24 01:40:33,210 | INFO     | 
[2025-11-24 02:41:10] 2025-11-24 01:40:33,211 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-11-24 02:41:10] 2025-11-24 01:40:33,498 | INFO     | time since job start (91404s) is within the limit (172800.0s)
[2025-11-24 02:41:10] 2025-11-24 01:40:33,499 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 02:41:10] 2025-11-24 01:40:33,499 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 02:41:10] 2025-11-24 01:40:33,499 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 02:41:10] 2025-11-24 01:40:33,500 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 02:41:10] 2025-11-24 01:40:33,500 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 02:41:10] 2025-11-24 01:40:33,500 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 02:41:10] 2025-11-24 01:40:33,500 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 02:41:10] 2025-11-24 01:40:33,500 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 02:41:10] 2025-11-24 01:40:33,500 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 02:41:10] 2025-11-24 01:40:33,500 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 02:41:10] 2025-11-24 01:40:33,500 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 02:41:10] 2025-11-24 01:40:33,501 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 02:41:10] 2025-11-24 01:40:33,501 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 02:41:10] 2025-11-24 01:40:33,501 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 02:41:10] 2025-11-24 01:40:33,501 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 02:41:10] 2025-11-24 01:40:33,501 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 02:41:10] 2025-11-24 01:40:33,501 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 02:41:10] 2025-11-24 01:40:33,501 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 02:41:10] 2025-11-24 01:40:33,501 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 02:41:10] 2025-11-24 01:40:33,501 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 02:41:10] 2025-11-24 01:40:33,502 | INFO     | job 6890933074 has completed (purged errors)
[2025-11-24 02:41:10] 2025-11-24 01:40:33,502 | INFO     | overall cleanup function is called
[2025-11-24 02:41:10] 2025-11-24 01:40:34,522 | INFO     | --- collectZombieJob: --- 10, [2022]
[2025-11-24 02:41:10] 2025-11-24 01:40:34,522 | INFO     | zombie collector waiting for pid 2022
[2025-11-24 02:41:10] 2025-11-24 01:40:34,522 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 02:41:10] 2025-11-24 01:40:34,522 | INFO     | collected zombie processes
[2025-11-24 02:41:10] 2025-11-24 01:40:34,522 | INFO     | will attempt to kill all subprocesses of pid=2022
[2025-11-24 02:41:10] 2025-11-24 01:40:34,669 | INFO     | process IDs to be killed: [2022] (in reverse order)
[2025-11-24 02:41:10] 2025-11-24 01:40:35,418 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 02:41:10] 2025-11-24 01:40:35,419 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 02:41:10] 2025-11-24 01:40:35,423 | INFO     | did not find any defunct processes belonging to 2022
[2025-11-24 02:41:10] 2025-11-24 01:40:35,427 | INFO     | did not find any defunct processes belonging to 2022
[2025-11-24 02:41:10] 2025-11-24 01:40:35,458 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 02:41:10] 2025-11-24 01:40:35,459 | INFO     | ready for new job
[2025-11-24 02:41:10] 2025-11-24 01:40:35,459 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 02:41:10] 2025-11-24 01:40:35,465 | INFO     | ***************************************
[2025-11-24 02:41:10] 2025-11-24 01:40:35,466 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 02:41:10] 2025-11-24 01:40:35,466 | INFO     | ***************************************
[2025-11-24 02:41:10] 2025-11-24 01:40:35,466 | INFO     | 
[2025-11-24 02:41:10] 2025-11-24 01:40:35,467 | INFO     | pilot is running in a VM
[2025-11-24 02:41:10] 2025-11-24 01:40:35,467 | INFO     | architecture information:
[2025-11-24 02:41:10] 2025-11-24 01:40:35,478 | INFO     | executing command: cat /etc/os-release
[2025-11-24 02:41:10] 2025-11-24 01:40:35,752 | INFO     | cat /etc/os-release:
[2025-11-24 02:41:10] NAME="CentOS Linux"
[2025-11-24 02:41:10] VERSION="7 (Core)"
[2025-11-24 02:41:10] ID="centos"
[2025-11-24 02:41:10] ID_LIKE="rhel fedora"
[2025-11-24 02:41:10] VERSION_ID="7"
[2025-11-24 02:41:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 02:41:10] ANSI_COLOR="0;31"
[2025-11-24 02:41:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 02:41:10] HOME_URL="https://www.centos.org/"
[2025-11-24 02:41:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 02:41:10] 
[2025-11-24 02:41:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 02:41:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 02:41:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 02:41:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 02:41:10] 
[2025-11-24 02:41:10] 2025-11-24 01:40:35,753 | INFO     | ***************************************
[2025-11-24 02:41:10] 2025-11-24 01:40:36,257 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-11-24 02:41:10] 2025-11-24 01:40:36,561 | INFO     | sufficient remaining disk space (494809382912 B)
[2025-11-24 02:41:10] 2025-11-24 01:40:36,562 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 02:41:10] 2025-11-24 01:40:36,562 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 02:41:10] 2025-11-24 01:40:36,562 | INFO     | update_server=False
[2025-11-24 02:41:10] 2025-11-24 01:40:36,562 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 02:41:10] 2025-11-24 01:40:36,565 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 02:41:10] 2025-11-24 01:40:36,678 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 02:41:10] 2025-11-24 01:40:36,678 | INFO     | aborting loop
[2025-11-24 02:41:10] 2025-11-24 01:40:37,031 | INFO     | all payload control threads have been joined
[2025-11-24 02:41:10] 2025-11-24 01:40:37,383 | INFO     | all data control threads have been joined
[2025-11-24 02:41:10] 2025-11-24 01:40:37,568 | INFO     | [job] retrieve thread has finished
[2025-11-24 02:41:10] 2025-11-24 01:40:37,584 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 02:41:10] 2025-11-24 01:40:37,590 | INFO     | [data] copytool_in thread has finished
[2025-11-24 02:41:10] 2025-11-24 01:40:37,684 | INFO     | [job] job monitor thread has finished
[2025-11-24 02:41:10] 2025-11-24 01:40:37,761 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 02:41:10] 2025-11-24 01:40:37,894 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 02:41:10] 2025-11-24 01:40:38,037 | INFO     | [payload] control thread has finished
[2025-11-24 02:41:10] 2025-11-24 01:40:38,094 | INFO     | all job control threads have been joined
[2025-11-24 02:41:10] 2025-11-24 01:40:38,229 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 02:41:10] 2025-11-24 01:40:38,371 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 02:41:10] 2025-11-24 01:40:38,389 | INFO     | [data] control thread has finished
[2025-11-24 02:41:10] 2025-11-24 01:40:38,572 | INFO     | [payload] failed_post thread has finished
[2025-11-24 02:41:10] 2025-11-24 01:40:38,593 | INFO     | [job] validate thread has finished
[2025-11-24 02:41:10] 2025-11-24 01:40:38,659 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 02:41:10] 2025-11-24 01:40:38,981 | INFO     | [payload] validate_post thread has finished
[2025-11-24 02:41:10] 2025-11-24 01:40:39,100 | INFO     | [job] control thread has finished
[2025-11-24 02:41:10] 2025-11-24 01:40:39,235 | INFO     | [job] queue monitor thread has finished
[2025-11-24 02:41:10] 2025-11-24 01:40:39,901 | INFO     | [data] copytool_out thread has finished
[2025-11-24 02:41:10] 2025-11-24 01:40:40,577 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 02:41:10] 2025-11-24 01:40:48,891 | INFO     | [monitor] cgroup control has ended
[2025-11-24 02:41:10] 2025-11-24 01:40:50,541 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139626757961536)>', '<ExcThread(monitor, started 139626081670912)>']
[2025-11-24 02:41:10] 2025-11-24 01:40:55,567 | INFO     | all workflow threads have been joined
[2025-11-24 02:41:10] 2025-11-24 01:40:55,567 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 02:41:10] 2025-11-24 01:40:55,567 | INFO     | traces error code: 0
[2025-11-24 02:41:10] 2025-11-24 01:40:55,568 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 02:41:10] 2025-11-24 01:41:06,739 | INFO     | PID=27806 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 02:41:10] 2025-11-24 01:41:06,740 | INFO     | .. there are 9 such processes running
[2025-11-24 02:41:10] 2025-11-24 01:41:06,740 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 02:41:10] 2025-11-24 01:41:06,740 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 02:41:10] 2025-11-24 01:41:06,740 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 02:41:10] 2025-11-24 01:41:06,740 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 02:41:10] 2025-11-24 01:41:06,740 | INFO     | [monitor] control thread has ended
[2025-11-24 02:41:10] 2025-11-24 01:41:07,173 [wrapper] ==== pilot stdout END ====
[2025-11-24 02:41:10] 2025-11-24 01:41:07,240 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 02:41:10] 2025-11-24 01:41:07,310 [wrapper] pilotpid: 27806
[2025-11-24 02:41:10] 2025-11-24 01:41:07,388 [wrapper] Pilot exit status: 0
[2025-11-24 02:41:10] 2025-11-24 01:41:07,695 [wrapper] pandaids: 6890933074
[2025-11-24 02:41:10] 2025-11-24 01:41:07,749 [wrapper] cleanup supervisor_pilot  9851 27807
[2025-11-24 02:41:10] 2025-11-24 01:41:07,813 [wrapper] Test setup, not cleaning
[2025-11-24 02:41:10] 2025-11-24 01:41:07,885 [wrapper] apfmon messages muted
[2025-11-24 02:41:10] 2025-11-24 01:41:07,949 [wrapper] ==== wrapper stdout END ====
[2025-11-24 02:41:10] 2025-11-24 01:41:08,003 [wrapper] ==== wrapper stderr END ====
[2025-11-24 02:41:10]  *** Error codes and diagnostics ***
[2025-11-24 02:41:10]     "exeErrorCode": 0,
[2025-11-24 02:41:10]     "exeErrorDiag": "",
[2025-11-24 02:41:10]     "pilotErrorCode": 0,
[2025-11-24 02:41:10]     "pilotErrorDiag": "",
[2025-11-24 02:41:10]  *** Listing of results directory ***
[2025-11-24 02:41:10] total 1329968
[2025-11-24 02:41:10] -rw-r--r--. 1 boinc boinc    576529 Nov 18 03:22 pilot3.tar.gz
[2025-11-24 02:41:10] -rw-r--r--. 1 boinc boinc      5112 Nov 18 03:56 queuedata.json
[2025-11-24 02:41:10] -rwx------. 1 boinc boinc     36292 Nov 18 03:58 runpilot2-wrapper.sh
[2025-11-24 02:41:10] -rw-r--r--. 1 boinc boinc       100 Nov 23 01:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 02:41:10] -rwxr-xr-x. 1 boinc boinc      7986 Nov 23 01:13 run_atlas
[2025-11-24 02:41:10] -rw-r--r--. 1 boinc boinc       105 Nov 23 01:13 job.xml
[2025-11-24 02:41:10] -rw-r--r--. 1 boinc boinc      6392 Nov 23 01:13 init_data.xml
[2025-11-24 02:41:10] -rw-r--r--. 2 boinc boinc 412552383 Nov 23 01:13 EVNT.47483658._000045.pool.root.1
[2025-11-24 02:41:10] -rw-r--r--. 2 boinc boinc     15120 Nov 23 01:13 start_atlas.sh
[2025-11-24 02:41:10] drwxrwx--x. 2 boinc boinc        68 Nov 23 01:13 shared
[2025-11-24 02:41:10] -rw-r--r--. 2 boinc boinc    590105 Nov 23 01:13 input.tar.gz
[2025-11-24 02:41:10] -rw-r--r--. 1 boinc boinc         0 Nov 23 01:13 boinc_lockfile
[2025-11-24 02:41:10] -rw-r--r--. 1 boinc boinc      2771 Nov 23 01:13 pandaJob.out
[2025-11-24 02:41:10] -rw-------. 1 boinc boinc    989784 Nov 23 01:17 agis_schedconf.cvmfs.json
[2025-11-24 02:41:10] drwx------. 5 boinc boinc      4096 Nov 23 01:17 pilot3
[2025-11-24 02:41:10] -rw-r--r--. 1 boinc boinc       533 Nov 24 02:13 boinc_task_state.xml
[2025-11-24 02:41:10] -rw-------. 1 boinc boinc 915959967 Nov 24 02:37 HITS.47483661._000124.pool.root.1
[2025-11-24 02:41:10] -rw-------. 1 boinc boinc      1030 Nov 24 02:38 memory_monitor_summary.json
[2025-11-24 02:41:10] -rw-------. 1 boinc boinc   1526164 Nov 24 02:38 agis_ddmendpoints.agis.ALL.json
[2025-11-24 02:41:10] -rw-------. 1 boinc boinc   2564434 Nov 24 02:38 log.47483661._000124.job.log.tgz.1
[2025-11-24 02:41:10] -rw-------. 1 boinc boinc        95 Nov 24 02:40 pilot_heartbeat.json
[2025-11-24 02:41:10] -rw-------. 1 boinc boinc      7958 Nov 24 02:40 heartbeat.json
[2025-11-24 02:41:10] -rw-r--r--. 1 boinc boinc      8192 Nov 24 02:40 boinc_mmap_file
[2025-11-24 02:41:10] -rw-r--r--. 1 boinc boinc        29 Nov 24 02:40 wrapper_checkpoint.txt
[2025-11-24 02:41:10] -rw-------. 1 boinc boinc       820 Nov 24 02:41 pilotlog.txt
[2025-11-24 02:41:10] -rw-------. 1 boinc boinc  12167960 Nov 24 02:41 log.47483661._000124.job.log.1
[2025-11-24 02:41:10] -rw-------. 1 boinc boinc       353 Nov 24 02:41 output.list
[2025-11-24 02:41:10] -rw-r--r--. 1 boinc boinc       620 Nov 24 02:41 runtime_log
[2025-11-24 02:41:10] -rw-------. 1 boinc boinc  14755840 Nov 24 02:41 result.tar.gz
[2025-11-24 02:41:10] -rw-------. 1 boinc boinc       662 Nov 24 02:41 WztNDmX6Qf8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmW2JODmbH8Cfn.diag
[2025-11-24 02:41:10] -rw-r--r--. 1 boinc boinc      8703 Nov 24 02:41 runtime_log.err
[2025-11-24 02:41:10] -rw-r--r--. 1 boinc boinc     21436 Nov 24 02:41 stderr.txt
[2025-11-24 02:41:10] HITS file was successfully produced:
[2025-11-24 02:41:10] -rw-------. 1 boinc boinc 915959967 Nov 24 02:37 shared/HITS.pool.root.1
[2025-11-24 02:41:10]  *** Contents of shared directory: ***
[2025-11-24 02:41:10] total 1312388
[2025-11-24 02:41:10] -rw-r--r--. 2 boinc boinc 412552383 Nov 23 01:13 ATLAS.root_0
[2025-11-24 02:41:10] -rw-r--r--. 2 boinc boinc     15120 Nov 23 01:13 start_atlas.sh
[2025-11-24 02:41:10] -rw-r--r--. 2 boinc boinc    590105 Nov 23 01:13 input.tar.gz
[2025-11-24 02:41:10] -rw-------. 1 boinc boinc 915959967 Nov 24 02:37 HITS.pool.root.1
[2025-11-24 02:41:10] -rw-------. 1 boinc boinc  14755840 Nov 24 02:41 result.tar.gz
02:41:12 (24026): run_atlas exited; CPU time 337979.108071
02:41:12 (24026): called boinc_finish(0)

</stderr_txt>
]]>

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