Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:45:02 (1755896): wrapper (7.7.26015): starting
21:45:02 (1755896): wrapper: running run_atlas (--nthreads 3)
[2025-11-23 21:45:02] Arguments: --nthreads 3
[2025-11-23 21:45:02] Threads: 3
[2025-11-23 21:45:02] Checking for CVMFS
[2025-11-23 21:45:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 21:45:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 21:45:02] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 21:45:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 21:45:02] 2.9.2.0 751620 7388 80356 153220 3 81 32611435 36864001 0 130560 0 2732253 99.911 424686 6727 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-23 21:45:02] CVMFS is ok
[2025-11-23 21:45:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 21:45:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 21:45:02] Further information can be found at the LHC@home message board.
[2025-11-23 21:45:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 21:45:02] Checking for apptainer binary...
[2025-11-23 21:45:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 21:45:02] Running /usr/bin/apptainer --version
[2025-11-23 21:45:02] apptainer version 1.4.1-1.1
[2025-11-23 21:45:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 21:45:02] thA361a
[2025-11-23 21:45:02] apptainer works
[2025-11-23 21:45:02] Set ATHENA_PROC_NUMBER=3
[2025-11-23 21:45:02] Set ATHENA_CORE_NUMBER=3
[2025-11-23 21:45:02] Starting ATLAS job with PandaID=6890934101
[2025-11-23 21:45:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 05:55:50]  *** The last 200 lines of the pilot log: ***
[2025-11-24 05:55:50] 2025-11-24 04:54:55,925 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3767.0235000000007
[2025-11-24 05:55:50] 2025-11-24 04:54:55,926 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6890934101/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 05:55:50] 2025-11-24 04:54:55,926 | INFO     | extracted standard info from prmon json
[2025-11-24 05:55:50] 2025-11-24 04:54:55,926 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 05:55:50] 2025-11-24 04:54:55,926 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 05:55:50] 2025-11-24 04:54:55,929 | INFO     | fitting pss+swap vs Time
[2025-11-24 05:55:50] 2025-11-24 04:54:55,929 | INFO     | sum of square deviations: 34723034300.5
[2025-11-24 05:55:50] 2025-11-24 04:54:55,931 | INFO     | sum of deviations: 221686016176.5001
[2025-11-24 05:55:50] 2025-11-24 04:54:55,931 | INFO     | mean x: 1763945399.5
[2025-11-24 05:55:50] 2025-11-24 04:54:55,931 | INFO     | mean y: 2215393.5871369294
[2025-11-24 05:55:50] 2025-11-24 04:54:55,931 | INFO     | intersect: -11259531635.312035
[2025-11-24 05:55:50] 2025-11-24 04:54:55,932 | INFO     | chi2: 4.047286378587763
[2025-11-24 05:55:50] 2025-11-24 04:54:55,932 | INFO     | sum of square deviations: 33653609598.0
[2025-11-24 05:55:50] 2025-11-24 04:54:55,934 | INFO     | sum of deviations: 287974770802.0
[2025-11-24 05:55:50] 2025-11-24 04:54:55,934 | INFO     | mean x: 1763945247.0
[2025-11-24 05:55:50] 2025-11-24 04:54:55,934 | INFO     | mean y: 2224809.819706499
[2025-11-24 05:55:50] 2025-11-24 04:54:55,934 | INFO     | intersect: -15091898354.974197
[2025-11-24 05:55:50] 2025-11-24 04:54:55,934 | INFO     | chi2: 2.4799822418815114
[2025-11-24 05:55:50] 2025-11-24 04:54:55,934 | INFO     | current chi2=2.4799822418815114 (change=38.72481435952001 %)
[2025-11-24 05:55:50] 2025-11-24 04:54:55,935 | INFO     | sum of square deviations: 32606371358.0
[2025-11-24 05:55:50] 2025-11-24 04:54:55,937 | INFO     | sum of deviations: 283995472859.50006
[2025-11-24 05:55:50] 2025-11-24 04:54:55,937 | INFO     | mean x: 1763945094.5
[2025-11-24 05:55:50] 2025-11-24 04:54:55,937 | INFO     | mean y: 2224230.743644068
[2025-11-24 05:55:50] 2025-11-24 04:54:55,937 | INFO     | intersect: -15361411781.081816
[2025-11-24 05:55:50] 2025-11-24 04:54:55,937 | INFO     | chi2: 2.4776779391081365
[2025-11-24 05:55:50] 2025-11-24 04:54:55,937 | INFO     | current chi2=2.4776779391081365 (change=0.09291609973895108 %)
[2025-11-24 05:55:50] 2025-11-24 04:54:55,937 | INFO     | right removable region: 471
[2025-11-24 05:55:50] 2025-11-24 04:54:55,937 | INFO     | sum of square deviations: 33653609598.0
[2025-11-24 05:55:50] 2025-11-24 04:54:55,939 | INFO     | sum of deviations: 120214817553.99997
[2025-11-24 05:55:50] 2025-11-24 04:54:55,939 | INFO     | mean x: 1763945552.0
[2025-11-24 05:55:50] 2025-11-24 04:54:55,939 | INFO     | mean y: 2229841.7987421383
[2025-11-24 05:55:50] 2025-11-24 04:54:55,939 | INFO     | intersect: -6298799832.042599
[2025-11-24 05:55:50] 2025-11-24 04:54:55,939 | INFO     | chi2: 1.9629826643483008
[2025-11-24 05:55:50] 2025-11-24 04:54:55,939 | INFO     | current chi2=1.9629826643483008 (change=51.498794976962984 %)
[2025-11-24 05:55:50] 2025-11-24 04:54:55,939 | INFO     | sum of square deviations: 32606371358.0
[2025-11-24 05:55:50] 2025-11-24 04:54:55,942 | INFO     | sum of deviations: 87433385529.00003
[2025-11-24 05:55:50] 2025-11-24 04:54:55,942 | INFO     | mean x: 1763945704.5
[2025-11-24 05:55:50] 2025-11-24 04:54:55,942 | INFO     | mean y: 2234595.0466101696
[2025-11-24 05:55:50] 2025-11-24 04:54:55,942 | INFO     | intersect: -4727753392.2837305
[2025-11-24 05:55:50] 2025-11-24 04:54:55,942 | INFO     | chi2: 1.666409992975288
[2025-11-24 05:55:50] 2025-11-24 04:54:55,942 | INFO     | current chi2=1.666409992975288 (change=15.10826747272744 %)
[2025-11-24 05:55:50] 2025-11-24 04:54:55,942 | INFO     | left removable region: 20
[2025-11-24 05:55:50] 2025-11-24 04:54:55,942 | INFO     | sum of square deviations: 28444998450.0
[2025-11-24 05:55:50] 2025-11-24 04:54:55,944 | INFO     | sum of deviations: 134684914071.0
[2025-11-24 05:55:50] 2025-11-24 04:54:55,944 | INFO     | mean x: 1763945674.0
[2025-11-24 05:55:50] 2025-11-24 04:54:55,944 | INFO     | mean y: 2246524.957871397
[2025-11-24 05:55:50] 2025-11-24 04:54:55,944 | INFO     | intersect: -8349902691.932038
[2025-11-24 05:55:50] 2025-11-24 04:54:55,944 | INFO     | chi2: 0.07666652377176132
[2025-11-24 05:55:50] 2025-11-24 04:54:55,944 | INFO     | current memory leak: 4.73 B/s (using 451 data points, chi2=0.08)
[2025-11-24 05:55:50] 2025-11-24 04:54:55,944 | INFO     | could have reported an average CPU frequency of 3914 MHz (20 samples)
[2025-11-24 05:55:50] 2025-11-24 04:54:55,944 | INFO     | ..............................
[2025-11-24 05:55:50] 2025-11-24 04:54:55,944 | INFO     | . Timing measurements:
[2025-11-24 05:55:50] 2025-11-24 04:54:55,944 | INFO     | . get job = 0 s
[2025-11-24 05:55:50] 2025-11-24 04:54:55,944 | INFO     | . initial setup = 1 s
[2025-11-24 05:55:50] 2025-11-24 04:54:55,944 | INFO     | . payload setup = 3 s
[2025-11-24 05:55:50] 2025-11-24 04:54:55,944 | INFO     | . stage-in = 0 s
[2025-11-24 05:55:50] 2025-11-24 04:54:55,945 | INFO     | . payload execution = 29365 s
[2025-11-24 05:55:50] 2025-11-24 04:54:55,945 | INFO     | . stage-out = 1 s
[2025-11-24 05:55:50] 2025-11-24 04:54:55,945 | INFO     | . log creation = 0 s
[2025-11-24 05:55:50] 2025-11-24 04:54:55,945 | INFO     | ..............................
[2025-11-24 05:55:50] 2025-11-24 04:54:55,974 | INFO     | 
[2025-11-24 05:55:50] 2025-11-24 04:54:55,974 | INFO     | job summary report
[2025-11-24 05:55:50] 2025-11-24 04:54:55,974 | INFO     | --------------------------------------------------
[2025-11-24 05:55:50] 2025-11-24 04:54:55,975 | INFO     | PanDA job id: 6890934101
[2025-11-24 05:55:50] 2025-11-24 04:54:55,975 | INFO     | task id: 47483661
[2025-11-24 05:55:50] 2025-11-24 04:54:55,975 | INFO     | errors: (none)
[2025-11-24 05:55:50] 2025-11-24 04:54:55,975 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 05:55:50] 2025-11-24 04:54:55,975 | INFO     | pilot state: finished 
[2025-11-24 05:55:50] 2025-11-24 04:54:55,975 | INFO     | transexitcode: 0
[2025-11-24 05:55:50] 2025-11-24 04:54:55,975 | INFO     | exeerrorcode: 0
[2025-11-24 05:55:50] 2025-11-24 04:54:55,975 | INFO     | exeerrordiag: 
[2025-11-24 05:55:50] 2025-11-24 04:54:55,975 | INFO     | exitcode: 0
[2025-11-24 05:55:50] 2025-11-24 04:54:55,975 | INFO     | exitmsg: OK
[2025-11-24 05:55:50] 2025-11-24 04:54:55,975 | INFO     | cpuconsumptiontime: 86868 s
[2025-11-24 05:55:50] 2025-11-24 04:54:55,975 | INFO     | nevents: 1000
[2025-11-24 05:55:50] 2025-11-24 04:54:55,975 | INFO     | neventsw: 0
[2025-11-24 05:55:50] 2025-11-24 04:54:55,975 | INFO     | pid: 1766075
[2025-11-24 05:55:50] 2025-11-24 04:54:55,975 | INFO     | pgrp: 1766075
[2025-11-24 05:55:50] 2025-11-24 04:54:55,975 | INFO     | corecount: 3
[2025-11-24 05:55:50] 2025-11-24 04:54:55,975 | INFO     | event service: False
[2025-11-24 05:55:50] 2025-11-24 04:54:55,975 | INFO     | sizes: {0: 2298624, 1: 2298823, 3: 2299085, 11: 2299113, 29369: 2338226, 29370: 2347410, 29374: 2347600}
[2025-11-24 05:55:50] 2025-11-24 04:54:55,975 | INFO     | --------------------------------------------------
[2025-11-24 05:55:50] 2025-11-24 04:54:55,975 | INFO     | 
[2025-11-24 05:55:50] 2025-11-24 04:54:55,975 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-24 05:55:50] 2025-11-24 04:54:55,989 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 05:55:50] 2025-11-24 04:54:55,989 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 05:55:50] 2025-11-24 04:54:55,989 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 05:55:50] 2025-11-24 04:54:55,989 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 05:55:50] 2025-11-24 04:54:55,989 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 05:55:50] 2025-11-24 04:54:55,989 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 05:55:50] 2025-11-24 04:54:55,989 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 05:55:50] 2025-11-24 04:54:55,989 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 05:55:50] 2025-11-24 04:54:55,989 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 05:55:50] 2025-11-24 04:54:55,989 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 05:55:50] 2025-11-24 04:54:55,989 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 05:55:50] 2025-11-24 04:54:55,989 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 05:55:50] 2025-11-24 04:54:55,989 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 05:55:50] 2025-11-24 04:54:55,989 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 05:55:50] 2025-11-24 04:54:55,990 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 05:55:50] 2025-11-24 04:54:55,990 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 05:55:50] 2025-11-24 04:54:55,990 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 05:55:50] 2025-11-24 04:54:55,990 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 05:55:50] 2025-11-24 04:54:55,990 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 05:55:50] 2025-11-24 04:54:55,990 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 05:55:50] 2025-11-24 04:54:55,990 | INFO     | job 6890934101 has completed (purged errors)
[2025-11-24 05:55:50] 2025-11-24 04:54:55,990 | INFO     | overall cleanup function is called
[2025-11-24 05:55:50] 2025-11-24 04:54:56,998 | INFO     | --- collectZombieJob: --- 10, [1766075]
[2025-11-24 05:55:50] 2025-11-24 04:54:56,998 | INFO     | zombie collector waiting for pid 1766075
[2025-11-24 05:55:50] 2025-11-24 04:54:56,999 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 05:55:50] 2025-11-24 04:54:56,999 | INFO     | collected zombie processes
[2025-11-24 05:55:50] 2025-11-24 04:54:56,999 | INFO     | will attempt to kill all subprocesses of pid=1766075
[2025-11-24 05:55:50] 2025-11-24 04:54:57,041 | INFO     | process IDs to be killed: [1766075] (in reverse order)
[2025-11-24 05:55:50] 2025-11-24 04:54:57,066 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 05:55:50] 2025-11-24 04:54:57,066 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 05:55:50] 2025-11-24 04:54:57,067 | INFO     | did not find any defunct processes belonging to 1766075
[2025-11-24 05:55:50] 2025-11-24 04:54:57,068 | INFO     | did not find any defunct processes belonging to 1766075
[2025-11-24 05:55:50] 2025-11-24 04:54:57,069 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 05:55:50] 2025-11-24 04:54:57,069 | INFO     | ready for new job
[2025-11-24 05:55:50] 2025-11-24 04:54:57,069 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 05:55:50] 2025-11-24 04:54:57,070 | INFO     | ***************************************
[2025-11-24 05:55:50] 2025-11-24 04:54:57,070 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 05:55:50] 2025-11-24 04:54:57,070 | INFO     | ***************************************
[2025-11-24 05:55:50] 2025-11-24 04:54:57,070 | INFO     | 
[2025-11-24 05:55:50] 2025-11-24 04:54:57,071 | INFO     | architecture information:
[2025-11-24 05:55:50] 2025-11-24 04:54:57,071 | INFO     | executing command: cat /etc/os-release
[2025-11-24 05:55:50] 2025-11-24 04:54:57,080 | INFO     | cat /etc/os-release:
[2025-11-24 05:55:50] NAME="CentOS Linux"
[2025-11-24 05:55:50] VERSION="7 (Core)"
[2025-11-24 05:55:50] ID="centos"
[2025-11-24 05:55:50] ID_LIKE="rhel fedora"
[2025-11-24 05:55:50] VERSION_ID="7"
[2025-11-24 05:55:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 05:55:50] ANSI_COLOR="0;31"
[2025-11-24 05:55:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 05:55:50] HOME_URL="https://www.centos.org/"
[2025-11-24 05:55:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 05:55:50] 
[2025-11-24 05:55:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 05:55:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 05:55:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 05:55:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 05:55:50] 
[2025-11-24 05:55:50] 2025-11-24 04:54:57,080 | INFO     | ***************************************
[2025-11-24 05:55:50] 2025-11-24 04:54:57,583 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-24 05:55:50] 2025-11-24 04:54:57,597 | INFO     | sufficient remaining disk space (267352276992 B)
[2025-11-24 05:55:50] 2025-11-24 04:54:57,597 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 05:55:50] 2025-11-24 04:54:57,597 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 05:55:50] 2025-11-24 04:54:57,597 | INFO     | update_server=False
[2025-11-24 05:55:50] 2025-11-24 04:54:57,597 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 05:55:50] 2025-11-24 04:54:57,597 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 05:55:50] 2025-11-24 04:54:58,065 | INFO     | all payload control threads have been joined
[2025-11-24 05:55:50] 2025-11-24 04:54:58,376 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 05:55:50] 2025-11-24 04:54:58,566 | INFO     | all data control threads have been joined
[2025-11-24 05:55:50] 2025-11-24 04:54:58,603 | INFO     | [job] queue monitor thread has finished
[2025-11-24 05:55:50] 2025-11-24 04:54:58,603 | INFO     | [job] retrieve thread has finished
[2025-11-24 05:55:50] 2025-11-24 04:54:58,760 | INFO     | [payload] validate_post thread has finished
[2025-11-24 05:55:50] 2025-11-24 04:54:58,900 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 05:55:50] 2025-11-24 04:54:58,906 | INFO     | all job control threads have been joined
[2025-11-24 05:55:50] 2025-11-24 04:54:59,071 | INFO     | [payload] control thread has finished
[2025-11-24 05:55:50] 2025-11-24 04:54:59,300 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 05:55:50] 2025-11-24 04:54:59,356 | INFO     | [job] validate thread has finished
[2025-11-24 05:55:50] 2025-11-24 04:54:59,377 | INFO     | [data] copytool_in thread has finished
[2025-11-24 05:55:50] 2025-11-24 04:54:59,468 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 05:55:50] 2025-11-24 04:54:59,511 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 05:55:50] 2025-11-24 04:54:59,572 | INFO     | [data] control thread has finished
[2025-11-24 05:55:50] 2025-11-24 04:54:59,636 | INFO     | [payload] failed_post thread has finished
[2025-11-24 05:55:50] 2025-11-24 04:54:59,835 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 05:55:50] 2025-11-24 04:54:59,912 | INFO     | [job] control thread has finished
[2025-11-24 05:55:50] 2025-11-24 04:55:00,232 | WARNING  | process 1766075 can no longer be monitored (due to stat problems) - aborting
[2025-11-24 05:55:50] 2025-11-24 04:55:00,260 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 05:55:50] 2025-11-24 04:55:00,295 | INFO     | number of running child processes to parent process 1766075: 1
[2025-11-24 05:55:50] 2025-11-24 04:55:00,295 | INFO     | maximum number of monitored processes: 9
[2025-11-24 05:55:50] 2025-11-24 04:55:00,296 | INFO     | aborting job monitoring since job object (job id=6890934101) has expired
[2025-11-24 05:55:50] 2025-11-24 04:55:00,296 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 05:55:50] 2025-11-24 04:55:00,296 | INFO     | will abort loop
[2025-11-24 05:55:50] 2025-11-24 04:55:00,382 | INFO     | [data] copytool_out thread has finished
[2025-11-24 05:55:50] 2025-11-24 04:55:01,301 | INFO     | [job] job monitor thread has finished
[2025-11-24 05:55:50] 2025-11-24 04:55:02,907 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 05:55:50] 2025-11-24 04:55:28,192 | INFO     | PID=1759618 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 05:55:50] 2025-11-24 04:55:28,192 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 05:55:50] 2025-11-24 04:55:28,192 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 05:55:50] 2025-11-24 04:55:28,192 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 05:55:50] 2025-11-24 04:55:44,675 | INFO     | [monitor] cgroup control has ended
[2025-11-24 05:55:50] 2025-11-24 04:55:45,393 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140033552312128)>', '<ExcThread(monitor, started 140032685885184)>']
[2025-11-24 05:55:50] 2025-11-24 04:55:46,286 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 05:55:50] 2025-11-24 04:55:46,286 | INFO     | [monitor] control thread has ended
[2025-11-24 05:55:50] 2025-11-24 04:55:50,409 | INFO     | all workflow threads have been joined
[2025-11-24 05:55:50] 2025-11-24 04:55:50,409 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 05:55:50] 2025-11-24 04:55:50,409 | INFO     | traces error code: 0
[2025-11-24 05:55:50] 2025-11-24 04:55:50,409 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 05:55:50] 2025-11-24 04:55:50,461 [wrapper] ==== pilot stdout END ====
[2025-11-24 05:55:50] 2025-11-24 04:55:50,464 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 05:55:50] 2025-11-24 04:55:50,466 [wrapper] pilotpid: 1759618
[2025-11-24 05:55:50] 2025-11-24 04:55:50,469 [wrapper] Pilot exit status: 0
[2025-11-24 05:55:50] 2025-11-24 04:55:50,476 [wrapper] pandaids: 6890934101
[2025-11-24 05:55:50] 2025-11-24 04:55:50,495 [wrapper] cleanup supervisor_pilot 1817203 1759619
[2025-11-24 05:55:50] 2025-11-24 04:55:50,497 [wrapper] Test setup, not cleaning
[2025-11-24 05:55:50] 2025-11-24 04:55:50,500 [wrapper] apfmon messages muted
[2025-11-24 05:55:50] 2025-11-24 04:55:50,502 [wrapper] ==== wrapper stdout END ====
[2025-11-24 05:55:50] 2025-11-24 04:55:50,505 [wrapper] ==== wrapper stderr END ====
[2025-11-24 05:55:50]  *** Error codes and diagnostics ***
[2025-11-24 05:55:50]     "exeErrorCode": 0,
[2025-11-24 05:55:50]     "exeErrorDiag": "",
[2025-11-24 05:55:50]     "pilotErrorCode": 0,
[2025-11-24 05:55:50]     "pilotErrorDiag": "",
[2025-11-24 05:55:50]  *** Listing of results directory ***
[2025-11-24 05:55:50] total 1310884
[2025-11-24 05:55:50] -rw-r--r-- 1 boinc boinc    576529 Nov 18 03:22 pilot3.tar.gz
[2025-11-24 05:55:50] -rwx------ 1 boinc boinc     36292 Nov 18 03:59 runpilot2-wrapper.sh
[2025-11-24 05:55:50] -rw-r--r-- 1 boinc boinc      5112 Nov 18 03:59 queuedata.json
[2025-11-24 05:55:50] -rw-r--r-- 1 boinc boinc       100 Nov 23 21:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 05:55:50] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 21:45 run_atlas
[2025-11-24 05:55:50] -rw-r--r-- 1 boinc boinc       105 Nov 23 21:45 job.xml
[2025-11-24 05:55:50] -rw-r--r-- 2 boinc boinc 410482842 Nov 23 21:45 EVNT.47483658._000073.pool.root.1
[2025-11-24 05:55:50] -rw-r--r-- 2 boinc boinc    590096 Nov 23 21:45 input.tar.gz
[2025-11-24 05:55:50] -rw-r--r-- 2 boinc boinc     15120 Nov 23 21:45 start_atlas.sh
[2025-11-24 05:55:50] drwxrwx--x 2 boinc boinc      4096 Nov 23 21:45 shared
[2025-11-24 05:55:50] -rw-r--r-- 1 boinc boinc         0 Nov 23 21:45 boinc_setup_complete
[2025-11-24 05:55:50] -rw-r--r-- 1 boinc boinc      6448 Nov 23 21:45 init_data.xml
[2025-11-24 05:55:50] -rw-r--r-- 1 boinc boinc         0 Nov 23 21:45 boinc_lockfile
[2025-11-24 05:55:50] -rw-r--r-- 1 boinc boinc      2771 Nov 23 21:45 pandaJob.out
[2025-11-24 05:55:50] -rw------- 1 boinc boinc    989786 Nov 23 21:45 agis_schedconf.cvmfs.json
[2025-11-24 05:55:50] drwx------ 5 boinc boinc      4096 Nov 23 21:45 pilot3
[2025-11-24 05:55:50] -rw-r--r-- 1 boinc boinc       531 Nov 24 05:52 boinc_task_state.xml
[2025-11-24 05:55:50] -rw------- 1 boinc boinc        95 Nov 24 05:54 pilot_heartbeat.json
[2025-11-24 05:55:50] -rw------- 1 boinc boinc 917311101 Nov 24 05:54 HITS.47483661._000402.pool.root.1
[2025-11-24 05:55:50] -rw------- 1 boinc boinc      1022 Nov 24 05:54 memory_monitor_summary.json
[2025-11-24 05:55:50] -rw------- 1 boinc boinc   1526164 Nov 24 05:54 agis_ddmendpoints.agis.ALL.json
[2025-11-24 05:55:50] -rw------- 1 boinc boinc   1177229 Nov 24 05:54 log.47483661._000402.job.log.tgz.1
[2025-11-24 05:55:50] -rw------- 1 boinc boinc      8554 Nov 24 05:54 heartbeat.json
[2025-11-24 05:55:50] -rw-r--r-- 1 boinc boinc      8192 Nov 24 05:55 boinc_mmap_file
[2025-11-24 05:55:50] -rw-r--r-- 1 boinc boinc        28 Nov 24 05:55 wrapper_checkpoint.txt
[2025-11-24 05:55:50] -rw------- 1 boinc boinc      5276 Nov 24 05:55 pilotlog.txt
[2025-11-24 05:55:50] -rw------- 1 boinc boinc   4137726 Nov 24 05:55 log.47483661._000402.job.log.1
[2025-11-24 05:55:50] -rw------- 1 boinc boinc       353 Nov 24 05:55 output.list
[2025-11-24 05:55:50] -rw-r--r-- 1 boinc boinc       620 Nov 24 05:55 runtime_log
[2025-11-24 05:55:50] -rw------- 1 boinc boinc   5335040 Nov 24 05:55 result.tar.gz
[2025-11-24 05:55:50] -rw------- 1 boinc boinc       666 Nov 24 05:55 4QcKDmE7Qf8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmr3JODmVB2UWo.diag
[2025-11-24 05:55:50] -rw-r--r-- 1 boinc boinc      8783 Nov 24 05:55 runtime_log.err
[2025-11-24 05:55:50] -rw-r--r-- 1 boinc boinc     21300 Nov 24 05:55 stderr.txt
[2025-11-24 05:55:50] HITS file was successfully produced:
[2025-11-24 05:55:50] -rw------- 1 boinc boinc 917311101 Nov 24 05:54 shared/HITS.pool.root.1
[2025-11-24 05:55:50]  *** Contents of shared directory: ***
[2025-11-24 05:55:50] total 1302488
[2025-11-24 05:55:50] -rw-r--r-- 2 boinc boinc 410482842 Nov 23 21:45 ATLAS.root_0
[2025-11-24 05:55:50] -rw-r--r-- 2 boinc boinc    590096 Nov 23 21:45 input.tar.gz
[2025-11-24 05:55:50] -rw-r--r-- 2 boinc boinc     15120 Nov 23 21:45 start_atlas.sh
[2025-11-24 05:55:50] -rw------- 1 boinc boinc 917311101 Nov 24 05:54 HITS.pool.root.1
[2025-11-24 05:55:50] -rw------- 1 boinc boinc   5335040 Nov 24 05:55 result.tar.gz
05:55:51 (1755896): run_atlas exited; CPU time 86881.010255
05:55:51 (1755896): called boinc_finish(0)

</stderr_txt>
]]>

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