Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
19:21:22 (24533): wrapper (7.7.26015): starting
19:21:22 (24533): wrapper: running run_atlas (--nthreads 2)
[2025-11-19 19:21:22] Arguments: --nthreads 2
[2025-11-19 19:21:22] Threads: 2
[2025-11-19 19:21:22] Checking for CVMFS
[2025-11-19 19:21:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 19:21:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 19:21:45] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 19:21:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 19:21:46] 2.13.3.0 24770 0 31108 153067 3 1 5471098 10240001 0 130560 0 0 0.000 1292 406 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-19 19:21:46] CVMFS is ok
[2025-11-19 19:21:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-19 19:21:46] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-19 19:21:46] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-19 19:21:46] Further information can be found at the LHC@home message board.
[2025-11-19 19:21:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 19:21:46] Checking for apptainer binary...
[2025-11-19 19:21:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 19:21:46] Running /usr/bin/apptainer --version
[2025-11-19 19:21:46] apptainer version 1.4.4
[2025-11-19 19:21:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 19:21:46] robot
[2025-11-19 19:21:46] apptainer works
[2025-11-19 19:21:46] Set ATHENA_PROC_NUMBER=2
[2025-11-19 19:21:46] Set ATHENA_CORE_NUMBER=2
[2025-11-19 19:21:46] Starting ATLAS job with PandaID=6890934224
[2025-11-19 19:21:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 10:04:28]  *** The last 200 lines of the pilot log: ***
[2025-11-20 10:04:28] 2025-11-20 18:04:10,285 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 10:04:28] 2025-11-20 18:04:10,815 | INFO     | time since job start (52927s) is within the limit (172800.0s)
[2025-11-20 10:04:28] 2025-11-20 18:04:11,034 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-20 10:04:28] 2025-11-20 18:04:11,036 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3692.94925
[2025-11-20 10:04:28] 2025-11-20 18:04:11,037 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6890934224/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 10:04:28] 2025-11-20 18:04:11,038 | INFO     | extracted standard info from prmon json
[2025-11-20 10:04:28] 2025-11-20 18:04:11,038 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 10:04:28] 2025-11-20 18:04:11,038 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 10:04:28] 2025-11-20 18:04:11,043 | INFO     | fitting pss+swap vs Time
[2025-11-20 10:04:28] 2025-11-20 18:04:11,043 | INFO     | sum of square deviations: 202785580398.9936
[2025-11-20 10:04:28] 2025-11-20 18:04:11,049 | INFO     | sum of deviations: 125205696654.66823
[2025-11-20 10:04:28] 2025-11-20 18:04:11,049 | INFO     | mean x: 1763635383.502304
[2025-11-20 10:04:28] 2025-11-20 18:04:11,049 | INFO     | mean y: 1991775.1658986176
[2025-11-20 10:04:28] 2025-11-20 18:04:11,049 | INFO     | intersect: -1086927843.2890084
[2025-11-20 10:04:28] 2025-11-20 18:04:11,049 | INFO     | chi2: 3.452676387309217
[2025-11-20 10:04:28] 2025-11-20 18:04:11,050 | INFO     | sum of square deviations: 199301366843.99564
[2025-11-20 10:04:28] 2025-11-20 18:04:11,056 | INFO     | sum of deviations: 236283282483.9719
[2025-11-20 10:04:28] 2025-11-20 18:04:11,056 | INFO     | mean x: 1763635231.0023174
[2025-11-20 10:04:28] 2025-11-20 18:04:11,056 | INFO     | mean y: 1996625.0139049827
[2025-11-20 10:04:28] 2025-11-20 18:04:11,056 | INFO     | intersect: -2088894812.8345559
[2025-11-20 10:04:28] 2025-11-20 18:04:11,057 | INFO     | chi2: 1.9721660549222044
[2025-11-20 10:04:28] 2025-11-20 18:04:11,057 | INFO     | current chi2=1.9721660549222044 (change=42.880078128052496 %)
[2025-11-20 10:04:28] 2025-11-20 18:04:11,057 | INFO     | sum of square deviations: 195857293576.49527
[2025-11-20 10:04:28] 2025-11-20 18:04:11,063 | INFO     | sum of deviations: 230719410024.71777
[2025-11-20 10:04:28] 2025-11-20 18:04:11,063 | INFO     | mean x: 1763635078.502331
[2025-11-20 10:04:28] 2025-11-20 18:04:11,063 | INFO     | mean y: 1996378.641025641
[2025-11-20 10:04:28] 2025-11-20 18:04:11,063 | INFO     | intersect: -2075561405.2973666
[2025-11-20 10:04:28] 2025-11-20 18:04:11,064 | INFO     | chi2: 1.9717497543863685
[2025-11-20 10:04:28] 2025-11-20 18:04:11,064 | INFO     | current chi2=1.9717497543863685 (change=0.021108797344774752 %)
[2025-11-20 10:04:28] 2025-11-20 18:04:11,064 | INFO     | right removable region: 857
[2025-11-20 10:04:28] 2025-11-20 18:04:11,064 | INFO     | sum of square deviations: 199301365623.9956
[2025-11-20 10:04:28] 2025-11-20 18:04:11,070 | INFO     | sum of deviations: 226273352.23760986
[2025-11-20 10:04:28] 2025-11-20 18:04:11,070 | INFO     | mean x: 1763635536.0023174
[2025-11-20 10:04:28] 2025-11-20 18:04:11,070 | INFO     | mean y: 1997233.3812282735
[2025-11-20 10:04:28] 2025-11-20 18:04:11,070 | INFO     | intersect: -5079.666688802885
[2025-11-20 10:04:28] 2025-11-20 18:04:11,070 | INFO     | chi2: 1.7912640779504683
[2025-11-20 10:04:28] 2025-11-20 18:04:11,071 | INFO     | current chi2=1.7912640779504683 (change=48.119549097201705 %)
[2025-11-20 10:04:28] 2025-11-20 18:04:11,071 | INFO     | sum of square deviations: 195857291136.49527
[2025-11-20 10:04:28] 2025-11-20 18:04:11,076 | INFO     | sum of deviations: 9663130318.07808
[2025-11-20 10:04:28] 2025-11-20 18:04:11,076 | INFO     | mean x: 1763635688.502331
[2025-11-20 10:04:28] 2025-11-20 18:04:11,076 | INFO     | mean y: 1996815.2109557108
[2025-11-20 10:04:28] 2025-11-20 18:04:11,076 | INFO     | intersect: -85016751.61987747
[2025-11-20 10:04:28] 2025-11-20 18:04:11,077 | INFO     | chi2: 1.7833484996363176
[2025-11-20 10:04:28] 2025-11-20 18:04:11,077 | INFO     | current chi2=1.7833484996363176 (change=0.4418990148681787 %)
[2025-11-20 10:04:28] 2025-11-20 18:04:11,077 | INFO     | left removable region: 20
[2025-11-20 10:04:28] 2025-11-20 18:04:11,077 | INFO     | sum of square deviations: 181825264441.99487
[2025-11-20 10:04:28] 2025-11-20 18:04:11,083 | INFO     | sum of deviations: 139028653683.9653
[2025-11-20 10:04:28] 2025-11-20 18:04:11,083 | INFO     | mean x: 1763635658.0023894
[2025-11-20 10:04:28] 2025-11-20 18:04:11,083 | INFO     | mean y: 2000347.5173237754
[2025-11-20 10:04:28] 2025-11-20 18:04:11,083 | INFO     | intersect: -1346524522.629794
[2025-11-20 10:04:28] 2025-11-20 18:04:11,083 | INFO     | chi2: 0.2596465621691668
[2025-11-20 10:04:28] 2025-11-20 18:04:11,083 | INFO     | current memory leak: 0.76 B/s (using 837 data points, chi2=0.26)
[2025-11-20 10:04:28] 2025-11-20 18:04:11,084 | INFO     | could have reported an average CPU frequency of 3411 MHz (33 samples)
[2025-11-20 10:04:28] 2025-11-20 18:04:11,084 | INFO     | ..............................
[2025-11-20 10:04:28] 2025-11-20 18:04:11,084 | INFO     | . Timing measurements:
[2025-11-20 10:04:28] 2025-11-20 18:04:11,084 | INFO     | . get job = 0 s
[2025-11-20 10:04:28] 2025-11-20 18:04:11,084 | INFO     | . initial setup = 6 s
[2025-11-20 10:04:28] 2025-11-20 18:04:11,084 | INFO     | . payload setup = 2 s
[2025-11-20 10:04:28] 2025-11-20 18:04:11,084 | INFO     | . stage-in = 0 s
[2025-11-20 10:04:28] 2025-11-20 18:04:11,084 | INFO     | . payload execution = 52899 s
[2025-11-20 10:04:28] 2025-11-20 18:04:11,084 | INFO     | . stage-out = 5 s
[2025-11-20 10:04:28] 2025-11-20 18:04:11,084 | INFO     | . log creation = 0 s
[2025-11-20 10:04:28] 2025-11-20 18:04:11,084 | INFO     | ..............................
[2025-11-20 10:04:28] 2025-11-20 18:04:11,114 | INFO     | 
[2025-11-20 10:04:28] 2025-11-20 18:04:11,114 | INFO     | job summary report
[2025-11-20 10:04:28] 2025-11-20 18:04:11,114 | INFO     | --------------------------------------------------
[2025-11-20 10:04:28] 2025-11-20 18:04:11,114 | INFO     | PanDA job id: 6890934224
[2025-11-20 10:04:28] 2025-11-20 18:04:11,114 | INFO     | task id: 47483661
[2025-11-20 10:04:28] 2025-11-20 18:04:11,114 | INFO     | errors: (none)
[2025-11-20 10:04:28] 2025-11-20 18:04:11,114 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 10:04:28] 2025-11-20 18:04:11,114 | INFO     | pilot state: finished 
[2025-11-20 10:04:28] 2025-11-20 18:04:11,114 | INFO     | transexitcode: 0
[2025-11-20 10:04:28] 2025-11-20 18:04:11,115 | INFO     | exeerrorcode: 0
[2025-11-20 10:04:28] 2025-11-20 18:04:11,115 | INFO     | exeerrordiag: 
[2025-11-20 10:04:28] 2025-11-20 18:04:11,115 | INFO     | exitcode: 0
[2025-11-20 10:04:28] 2025-11-20 18:04:11,115 | INFO     | exitmsg: OK
[2025-11-20 10:04:28] 2025-11-20 18:04:11,115 | INFO     | cpuconsumptiontime: 105064 s
[2025-11-20 10:04:28] 2025-11-20 18:04:11,115 | INFO     | nevents: 1000
[2025-11-20 10:04:28] 2025-11-20 18:04:11,115 | INFO     | neventsw: 0
[2025-11-20 10:04:28] 2025-11-20 18:04:11,115 | INFO     | pid: 35676
[2025-11-20 10:04:28] 2025-11-20 18:04:11,115 | INFO     | pgrp: 35676
[2025-11-20 10:04:28] 2025-11-20 18:04:11,115 | INFO     | corecount: 2
[2025-11-20 10:04:28] 2025-11-20 18:04:11,115 | INFO     | event service: False
[2025-11-20 10:04:28] 2025-11-20 18:04:11,115 | INFO     | sizes: {0: 2297196, 2: 2297458, 11: 2297486, 52905: 2347603, 52912: 2358249, 52916: 2358503}
[2025-11-20 10:04:28] 2025-11-20 18:04:11,115 | INFO     | --------------------------------------------------
[2025-11-20 10:04:28] 2025-11-20 18:04:11,115 | INFO     | 
[2025-11-20 10:04:28] 2025-11-20 18:04:11,115 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-11-20 10:04:28] 2025-11-20 18:04:11,126 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 10:04:28] 2025-11-20 18:04:11,126 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 10:04:28] 2025-11-20 18:04:11,126 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 10:04:28] 2025-11-20 18:04:11,126 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 10:04:28] 2025-11-20 18:04:11,126 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 10:04:28] 2025-11-20 18:04:11,126 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 10:04:28] 2025-11-20 18:04:11,126 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 10:04:28] 2025-11-20 18:04:11,126 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 10:04:28] 2025-11-20 18:04:11,126 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 10:04:28] 2025-11-20 18:04:11,126 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 10:04:28] 2025-11-20 18:04:11,126 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 10:04:28] 2025-11-20 18:04:11,126 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 10:04:28] 2025-11-20 18:04:11,126 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 10:04:28] 2025-11-20 18:04:11,126 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 10:04:28] 2025-11-20 18:04:11,127 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 10:04:28] 2025-11-20 18:04:11,127 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 10:04:28] 2025-11-20 18:04:11,127 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 10:04:28] 2025-11-20 18:04:11,127 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 10:04:28] 2025-11-20 18:04:11,127 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 10:04:28] 2025-11-20 18:04:11,127 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 10:04:28] 2025-11-20 18:04:11,127 | INFO     | job 6890934224 has completed (purged errors)
[2025-11-20 10:04:28] 2025-11-20 18:04:11,127 | INFO     | overall cleanup function is called
[2025-11-20 10:04:28] 2025-11-20 18:04:12,136 | INFO     | --- collectZombieJob: --- 10, [35676]
[2025-11-20 10:04:28] 2025-11-20 18:04:12,136 | INFO     | zombie collector waiting for pid 35676
[2025-11-20 10:04:28] 2025-11-20 18:04:12,136 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 10:04:28] 2025-11-20 18:04:12,136 | INFO     | collected zombie processes
[2025-11-20 10:04:28] 2025-11-20 18:04:12,136 | INFO     | will attempt to kill all subprocesses of pid=35676
[2025-11-20 10:04:28] 2025-11-20 18:04:12,204 | INFO     | process IDs to be killed: [35676] (in reverse order)
[2025-11-20 10:04:28] 2025-11-20 18:04:12,236 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 10:04:28] 2025-11-20 18:04:12,236 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 10:04:28] 2025-11-20 18:04:12,240 | INFO     | did not find any defunct processes belonging to 35676
[2025-11-20 10:04:28] 2025-11-20 18:04:12,242 | INFO     | did not find any defunct processes belonging to 35676
[2025-11-20 10:04:28] 2025-11-20 18:04:12,242 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 10:04:28] 2025-11-20 18:04:12,243 | INFO     | ready for new job
[2025-11-20 10:04:28] 2025-11-20 18:04:12,243 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 10:04:28] 2025-11-20 18:04:12,244 | INFO     | ***************************************
[2025-11-20 10:04:28] 2025-11-20 18:04:12,244 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 10:04:28] 2025-11-20 18:04:12,244 | INFO     | ***************************************
[2025-11-20 10:04:28] 2025-11-20 18:04:12,244 | INFO     | 
[2025-11-20 10:04:28] 2025-11-20 18:04:12,245 | INFO     | architecture information:
[2025-11-20 10:04:28] 2025-11-20 18:04:12,245 | INFO     | executing command: cat /etc/os-release
[2025-11-20 10:04:28] 2025-11-20 18:04:12,256 | INFO     | cat /etc/os-release:
[2025-11-20 10:04:28] NAME="CentOS Linux"
[2025-11-20 10:04:28] VERSION="7 (Core)"
[2025-11-20 10:04:28] ID="centos"
[2025-11-20 10:04:28] ID_LIKE="rhel fedora"
[2025-11-20 10:04:28] VERSION_ID="7"
[2025-11-20 10:04:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 10:04:28] ANSI_COLOR="0;31"
[2025-11-20 10:04:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 10:04:28] HOME_URL="https://www.centos.org/"
[2025-11-20 10:04:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 10:04:28] 
[2025-11-20 10:04:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 10:04:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 10:04:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 10:04:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 10:04:28] 
[2025-11-20 10:04:28] 2025-11-20 18:04:12,256 | INFO     | ***************************************
[2025-11-20 10:04:28] 2025-11-20 18:04:12,759 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-11-20 10:04:28] 2025-11-20 18:04:12,767 | INFO     | sufficient remaining disk space (203506581504 B)
[2025-11-20 10:04:28] 2025-11-20 18:04:12,768 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 10:04:28] 2025-11-20 18:04:12,768 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 10:04:28] 2025-11-20 18:04:12,768 | INFO     | update_server=False
[2025-11-20 10:04:28] 2025-11-20 18:04:12,768 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 10:04:28] 2025-11-20 18:04:12,768 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-20 10:04:28] 2025-11-20 18:04:12,768 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 10:04:28] 2025-11-20 18:04:12,768 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 10:04:28] 2025-11-20 18:04:12,768 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 10:04:28] 2025-11-20 18:04:12,768 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 10:04:28] 2025-11-20 18:04:12,768 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 10:04:28] 2025-11-20 18:04:12,768 | INFO     | all job control threads have been joined
[2025-11-20 10:04:28] 2025-11-20 18:04:12,788 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-20 10:04:28] 2025-11-20 18:04:12,788 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-20 10:04:28] 2025-11-20 18:04:12,788 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 10:04:28] 2025-11-20 18:04:12,788 | INFO     | will abort loop
[2025-11-20 10:04:28] 2025-11-20 18:04:12,911 | INFO     | all payload control threads have been joined
[2025-11-20 10:04:28] 2025-11-20 18:04:13,420 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 10:04:28] 2025-11-20 18:04:13,503 | INFO     | all data control threads have been joined
[2025-11-20 10:04:28] 2025-11-20 18:04:13,771 | INFO     | [job] retrieve thread has finished
[2025-11-20 10:04:28] 2025-11-20 18:04:13,773 | INFO     | [job] control thread has finished
[2025-11-20 10:04:28] 2025-11-20 18:04:13,774 | INFO     | [job] queue monitor thread has finished
[2025-11-20 10:04:28] 2025-11-20 18:04:13,793 | INFO     | [job] job monitor thread has finished
[2025-11-20 10:04:28] 2025-11-20 18:04:13,916 | INFO     | [payload] control thread has finished
[2025-11-20 10:04:28] 2025-11-20 18:04:13,926 | INFO     | [data] copytool_in thread has finished
[2025-11-20 10:04:28] 2025-11-20 18:04:14,347 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 10:04:28] 2025-11-20 18:04:14,469 | INFO     | [payload] validate_post thread has finished
[2025-11-20 10:04:28] 2025-11-20 18:04:14,509 | INFO     | [data] control thread has finished
[2025-11-20 10:04:28] 2025-11-20 18:04:14,697 | INFO     | [payload] failed_post thread has finished
[2025-11-20 10:04:28] 2025-11-20 18:04:14,774 | INFO     | [data] copytool_out thread has finished
[2025-11-20 10:04:28] 2025-11-20 18:04:14,830 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 10:04:28] 2025-11-20 18:04:14,831 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 10:04:28] 2025-11-20 18:04:15,144 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 10:04:28] 2025-11-20 18:04:15,244 | INFO     | [job] validate thread has finished
[2025-11-20 10:04:28] 2025-11-20 18:04:17,426 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 10:04:28] 2025-11-20 18:04:22,401 | INFO     | [monitor] cgroup control has ended
[2025-11-20 10:04:28] 2025-11-20 18:04:23,406 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139667562817344)>', '<ExcThread(monitor, started 139667060008704)>']
[2025-11-20 10:04:28] 2025-11-20 18:04:23,823 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 10:04:28] 2025-11-20 18:04:23,823 | INFO     | [monitor] control thread has ended
[2025-11-20 10:04:28] 2025-11-20 18:04:28,408 | INFO     | all workflow threads have been joined
[2025-11-20 10:04:28] 2025-11-20 18:04:28,408 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 10:04:28] 2025-11-20 18:04:28,408 | INFO     | traces error code: 0
[2025-11-20 10:04:28] 2025-11-20 18:04:28,408 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 10:04:28] 2025-11-20 18:04:28,480 [wrapper] ==== pilot stdout END ====
[2025-11-20 10:04:28] 2025-11-20 18:04:28,481 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 10:04:28] 2025-11-20 18:04:28,483 [wrapper] pilotpid: 29059
[2025-11-20 10:04:28] 2025-11-20 18:04:28,484 [wrapper] Pilot exit status: 0
[2025-11-20 10:04:28] 2025-11-20 18:04:28,490 [wrapper] pandaids: 6890934224
[2025-11-20 10:04:28] 2025-11-20 18:04:28,512 [wrapper] cleanup supervisor_pilot  346411 29060
[2025-11-20 10:04:28] 2025-11-20 18:04:28,513 [wrapper] Test setup, not cleaning
[2025-11-20 10:04:28] 2025-11-20 18:04:28,515 [wrapper] apfmon messages muted
[2025-11-20 10:04:28] 2025-11-20 18:04:28,516 [wrapper] ==== wrapper stdout END ====
[2025-11-20 10:04:28] 2025-11-20 18:04:28,517 [wrapper] ==== wrapper stderr END ====
[2025-11-20 10:04:28]  *** Error codes and diagnostics ***
[2025-11-20 10:04:28]     "exeErrorCode": 0,
[2025-11-20 10:04:28]     "exeErrorDiag": "",
[2025-11-20 10:04:28]     "pilotErrorCode": 0,
[2025-11-20 10:04:28]     "pilotErrorDiag": "",
[2025-11-20 10:04:28]  *** Listing of results directory ***
[2025-11-20 10:04:28] total 1323052
[2025-11-20 10:04:28] -rw-r--r-- 1 boinc boinc    576529 Nov 17 18:22 pilot3.tar.gz
[2025-11-20 10:04:28] -rwx------ 1 boinc boinc     36292 Nov 17 19:00 runpilot2-wrapper.sh
[2025-11-20 10:04:28] -rw-r--r-- 1 boinc boinc      5112 Nov 17 19:01 queuedata.json
[2025-11-20 10:04:28] -rw-r--r-- 1 boinc boinc       100 Nov 19 19:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 10:04:28] -rwxr-xr-x 1 boinc boinc      7986 Nov 19 19:21 run_atlas
[2025-11-20 10:04:28] -rw-r--r-- 1 boinc boinc       105 Nov 19 19:21 job.xml
[2025-11-20 10:04:28] -rw-r--r-- 2 boinc boinc 410934520 Nov 19 19:21 EVNT.47483658._000081.pool.root.1
[2025-11-20 10:04:28] -rw-r--r-- 2 boinc boinc    590099 Nov 19 19:21 input.tar.gz
[2025-11-20 10:04:28] -rw-r--r-- 2 boinc boinc     15120 Nov 19 19:21 start_atlas.sh
[2025-11-20 10:04:28] drwxrwx--x 2 boinc boinc      4096 Nov 19 19:21 shared
[2025-11-20 10:04:28] -rw-r--r-- 1 boinc boinc         0 Nov 19 19:21 boinc_setup_complete
[2025-11-20 10:04:28] -rw-r--r-- 1 boinc boinc      9125 Nov 19 19:21 init_data.xml
[2025-11-20 10:04:28] -rw-r--r-- 1 boinc boinc         0 Nov 19 19:21 boinc_lockfile
[2025-11-20 10:04:28] -rw-r--r-- 1 boinc boinc      2771 Nov 19 19:21 pandaJob.out
[2025-11-20 10:04:28] -rw------- 1 boinc boinc    989427 Nov 19 19:21 agis_schedconf.cvmfs.json
[2025-11-20 10:04:28] drwx------ 5 boinc boinc      4096 Nov 19 19:22 pilot3
[2025-11-20 10:04:28] -rw-r--r-- 1 boinc boinc       532 Nov 20 10:00 boinc_task_state.xml
[2025-11-20 10:04:28] -rw------- 1 boinc boinc        95 Nov 20 10:03 pilot_heartbeat.json
[2025-11-20 10:04:28] -rw------- 1 boinc boinc 922600740 Nov 20 10:03 HITS.47483661._000490.pool.root.1
[2025-11-20 10:04:28] -rw------- 1 boinc boinc      1058 Nov 20 10:03 memory_monitor_summary.json
[2025-11-20 10:04:28] -rw------- 1 boinc boinc   1526164 Nov 20 10:04 agis_ddmendpoints.agis.ALL.json
[2025-11-20 10:04:28] -rw------- 1 boinc boinc   1330737 Nov 20 10:04 log.47483661._000490.job.log.tgz.1
[2025-11-20 10:04:28] -rw------- 1 boinc boinc      8599 Nov 20 10:04 heartbeat.json
[2025-11-20 10:04:28] -rw-r--r-- 1 boinc boinc      8192 Nov 20 10:04 boinc_mmap_file
[2025-11-20 10:04:28] -rw-r--r-- 1 boinc boinc        29 Nov 20 10:04 wrapper_checkpoint.txt
[2025-11-20 10:04:28] -rw------- 1 boinc boinc      4739 Nov 20 10:04 pilotlog.txt
[2025-11-20 10:04:28] -rw------- 1 boinc boinc   7338658 Nov 20 10:04 log.47483661._000490.job.log.1
[2025-11-20 10:04:28] -rw------- 1 boinc boinc       353 Nov 20 10:04 output.list
[2025-11-20 10:04:28] -rw-r--r-- 1 boinc boinc       620 Nov 20 10:04 runtime_log
[2025-11-20 10:04:28] -rw------- 1 boinc boinc   8693760 Nov 20 10:04 result.tar.gz
[2025-11-20 10:04:28] -rw-r--r-- 1 boinc boinc      8639 Nov 20 10:04 runtime_log.err
[2025-11-20 10:04:28] -rw------- 1 boinc boinc       652 Nov 20 10:04 Hz3NDmB8Qf8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmp5JODmVytNZm.diag
[2025-11-20 10:04:28] -rw-r--r-- 1 boinc boinc     21251 Nov 20 10:04 stderr.txt
[2025-11-20 10:04:28] HITS file was successfully produced:
[2025-11-20 10:04:28] -rw------- 1 boinc boinc 922600740 Nov 20 10:03 shared/HITS.pool.root.1
[2025-11-20 10:04:28]  *** Contents of shared directory: ***
[2025-11-20 10:04:28] total 1311380
[2025-11-20 10:04:28] -rw-r--r-- 2 boinc boinc 410934520 Nov 19 19:21 ATLAS.root_0
[2025-11-20 10:04:28] -rw-r--r-- 2 boinc boinc    590099 Nov 19 19:21 input.tar.gz
[2025-11-20 10:04:28] -rw-r--r-- 2 boinc boinc     15120 Nov 19 19:21 start_atlas.sh
[2025-11-20 10:04:28] -rw------- 1 boinc boinc 922600740 Nov 20 10:03 HITS.pool.root.1
[2025-11-20 10:04:28] -rw------- 1 boinc boinc   8693760 Nov 20 10:04 result.tar.gz
10:04:50 (24533): run_atlas exited; CPU time 105282.977734
10:04:50 (24533): called boinc_finish(0)

</stderr_txt>
]]>

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