Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:41:33 (21816): wrapper (7.7.26015): starting
02:41:33 (21816): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 02:41:33] Arguments: --nthreads 8
[2025-11-23 02:41:33] Threads: 8
[2025-11-23 02:41:33] Checking for CVMFS
[2025-11-23 02:41:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 02:41:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 02:41:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 02:41:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 02:41:35] 2.11.2.0 4277 280229 137172 153192 0 161 24885656 25165824 4136 130560 2 141732661 99.884 74870877 2977 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-23 02:41:35] CVMFS is ok
[2025-11-23 02:41:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 02:41:35] Checking for apptainer binary...
[2025-11-23 02:41:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 02:41:35] Running /usr/bin/apptainer --version
[2025-11-23 02:41:35] apptainer version 1.3.2-1.el7
[2025-11-23 02:41:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 02:41:38] cg-vwn279.simple-grid.lan
[2025-11-23 02:41:38] apptainer works
[2025-11-23 02:41:38] Set ATHENA_PROC_NUMBER=8
[2025-11-23 02:41:38] Set ATHENA_CORE_NUMBER=8
[2025-11-23 02:41:38] Starting ATLAS job with PandaID=6890933830
[2025-11-23 02:41:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/20 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 04:16:55]  *** The last 200 lines of the pilot log: ***
[2025-11-24 04:16:55] 2025-11-24 03:15:41,819 | INFO     | time since job start (91895s) is within the limit (172800.0s)
[2025-11-24 04:16:55] 2025-11-24 03:15:42,063 | INFO     | monitor loop #6165: job 0:6890933830 is in state 'finished'
[2025-11-24 04:16:55] 2025-11-24 03:15:42,063 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 04:16:55] 2025-11-24 03:15:43,826 | INFO     | time since job start (91897s) is within the limit (172800.0s)
[2025-11-24 04:16:55] 2025-11-24 03:15:44,568 | INFO     | monitor loop #6166: job 0:6890933830 is in state 'finished'
[2025-11-24 04:16:55] 2025-11-24 03:15:44,568 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 04:16:55] 2025-11-24 03:15:45,834 | INFO     | time since job start (91899s) is within the limit (172800.0s)
[2025-11-24 04:16:55] 2025-11-24 03:15:47,081 | INFO     | monitor loop #6167: job 0:6890933830 is in state 'finished'
[2025-11-24 04:16:55] 2025-11-24 03:15:47,081 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 04:16:55] 2025-11-24 03:15:47,841 | INFO     | time since job start (91901s) is within the limit (172800.0s)
[2025-11-24 04:16:55] 2025-11-24 03:15:49,590 | INFO     | monitor loop #6168: job 0:6890933830 is in state 'finished'
[2025-11-24 04:16:55] 2025-11-24 03:15:49,590 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 04:16:55] 2025-11-24 03:15:49,853 | INFO     | time since job start (91903s) is within the limit (172800.0s)
[2025-11-24 04:16:55] 2025-11-24 03:15:51,351 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 04:16:55] 2025-11-24 03:15:51,352 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-24 04:16:55] 2025-11-24 03:15:51,354 | INFO     | using path: /var/lib/boinc/slots/20/PanDA_Pilot-6890933830/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 04:16:55] 2025-11-24 03:15:51,355 | INFO     | extracted standard info from prmon json
[2025-11-24 04:16:55] 2025-11-24 03:15:51,355 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 04:16:55] 2025-11-24 03:15:51,355 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 04:16:55] 2025-11-24 03:15:51,396 | INFO     | fitting pss+swap vs Time
[2025-11-24 04:16:55] 2025-11-24 03:15:51,400 | INFO     | sum of square deviations: 1044437726862.9021
[2025-11-24 04:16:55] 2025-11-24 03:15:51,509 | INFO     | sum of deviations: 2467242044851.9824
[2025-11-24 04:16:55] 2025-11-24 03:15:51,509 | INFO     | mean x: 1763908345.418946
[2025-11-24 04:16:55] 2025-11-24 03:15:51,509 | INFO     | mean y: 2841330.1274182787
[2025-11-24 04:16:55] 2025-11-24 03:15:51,509 | INFO     | intersect: -4163983288.660199
[2025-11-24 04:16:55] 2025-11-24 03:15:51,511 | INFO     | chi2: 19.896574660384832
[2025-11-24 04:16:55] 2025-11-24 03:15:51,513 | INFO     | sum of square deviations: 1034021836095.3007
[2025-11-24 04:16:55] 2025-11-24 03:15:51,599 | INFO     | sum of deviations: 2971337572426.3115
[2025-11-24 04:16:55] 2025-11-24 03:15:51,599 | INFO     | mean x: 1763908192.9236948
[2025-11-24 04:16:55] 2025-11-24 03:15:51,600 | INFO     | mean y: 2848709.169344043
[2025-11-24 04:16:55] 2025-11-24 03:15:51,600 | INFO     | intersect: -5065870833.288869
[2025-11-24 04:16:55] 2025-11-24 03:15:51,602 | INFO     | chi2: 16.51705645430839
[2025-11-24 04:16:55] 2025-11-24 03:15:51,602 | INFO     | current chi2=16.51705645430839 (change=16.98542720926356 %)
[2025-11-24 04:16:55] 2025-11-24 03:15:51,602 | INFO     | right removable region: 1493
[2025-11-24 04:16:55] 2025-11-24 03:15:51,604 | INFO     | sum of square deviations: 1034020538625.3003
[2025-11-24 04:16:55] 2025-11-24 03:15:51,706 | INFO     | sum of deviations: 1935452534651.5552
[2025-11-24 04:16:55] 2025-11-24 03:15:51,707 | INFO     | mean x: 1763908497.9236948
[2025-11-24 04:16:55] 2025-11-24 03:15:51,707 | INFO     | mean y: 2849113.232931727
[2025-11-24 04:16:55] 2025-11-24 03:15:51,707 | INFO     | intersect: -3298788567.71545
[2025-11-24 04:16:55] 2025-11-24 03:15:51,709 | INFO     | chi2: 16.624691491182492
[2025-11-24 04:16:55] 2025-11-24 03:15:51,709 | INFO     | current chi2=16.624691491182492 (change=16.44445451063915 %)
[2025-11-24 04:16:55] 2025-11-24 03:15:51,710 | INFO     | left removable region: 10
[2025-11-24 04:16:55] 2025-11-24 03:15:51,712 | INFO     | sum of square deviations: 1011349010787.6631
[2025-11-24 04:16:55] 2025-11-24 03:15:51,782 | INFO     | sum of deviations: 2351723221743.168
[2025-11-24 04:16:55] 2025-11-24 03:15:51,782 | INFO     | mean x: 1763908467.4308834
[2025-11-24 04:16:55] 2025-11-24 03:15:51,783 | INFO     | mean y: 2860851.1186783547
[2025-11-24 04:16:55] 2025-11-24 03:15:51,783 | INFO     | intersect: -4098813703.9944696
[2025-11-24 04:16:55] 2025-11-24 03:15:51,785 | INFO     | chi2: 12.10570846050868
[2025-11-24 04:16:55] 2025-11-24 03:15:51,785 | INFO     | current memory leak: 2.33 B/s (using 1483 data points, chi2=12.11)
[2025-11-24 04:16:55] 2025-11-24 03:15:51,788 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-24 04:16:55] 2025-11-24 03:15:51,788 | INFO     | ..............................
[2025-11-24 04:16:55] 2025-11-24 03:15:51,788 | INFO     | . Timing measurements:
[2025-11-24 04:16:55] 2025-11-24 03:15:51,788 | INFO     | . get job = 0 s
[2025-11-24 04:16:55] 2025-11-24 03:15:51,788 | INFO     | . initial setup = 4 s
[2025-11-24 04:16:55] 2025-11-24 03:15:51,789 | INFO     | . payload setup = 120 s
[2025-11-24 04:16:55] 2025-11-24 03:15:51,789 | INFO     | . stage-in = 0 s
[2025-11-24 04:16:55] 2025-11-24 03:15:51,789 | INFO     | . payload execution = 91530 s
[2025-11-24 04:16:55] 2025-11-24 03:15:51,789 | INFO     | . stage-out = 9 s
[2025-11-24 04:16:55] 2025-11-24 03:15:51,789 | INFO     | . log creation = 2 s
[2025-11-24 04:16:55] 2025-11-24 03:15:51,789 | INFO     | ..............................
[2025-11-24 04:16:55] 2025-11-24 03:15:51,864 | INFO     | time since job start (91905s) is within the limit (172800.0s)
[2025-11-24 04:16:55] 2025-11-24 03:15:52,382 | INFO     | 
[2025-11-24 04:16:55] 2025-11-24 03:15:52,383 | INFO     | job summary report
[2025-11-24 04:16:55] 2025-11-24 03:15:52,383 | INFO     | --------------------------------------------------
[2025-11-24 04:16:55] 2025-11-24 03:15:52,383 | INFO     | PanDA job id: 6890933830
[2025-11-24 04:16:55] 2025-11-24 03:15:52,383 | INFO     | task id: 47483661
[2025-11-24 04:16:55] 2025-11-24 03:15:52,383 | INFO     | errors: (none)
[2025-11-24 04:16:55] 2025-11-24 03:15:52,383 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 04:16:55] 2025-11-24 03:15:52,384 | INFO     | pilot state: finished 
[2025-11-24 04:16:55] 2025-11-24 03:15:52,384 | INFO     | transexitcode: 0
[2025-11-24 04:16:55] 2025-11-24 03:15:52,384 | INFO     | exeerrorcode: 0
[2025-11-24 04:16:55] 2025-11-24 03:15:52,384 | INFO     | exeerrordiag: 
[2025-11-24 04:16:55] 2025-11-24 03:15:52,384 | INFO     | exitcode: 0
[2025-11-24 04:16:55] 2025-11-24 03:15:52,384 | INFO     | exitmsg: OK
[2025-11-24 04:16:55] 2025-11-24 03:15:52,384 | INFO     | cpuconsumptiontime: 331312 s
[2025-11-24 04:16:55] 2025-11-24 03:15:52,384 | INFO     | nevents: 1000
[2025-11-24 04:16:55] 2025-11-24 03:15:52,384 | INFO     | neventsw: 0
[2025-11-24 04:16:55] 2025-11-24 03:15:52,384 | INFO     | pid: 32616
[2025-11-24 04:16:55] 2025-11-24 03:15:52,384 | INFO     | pgrp: 32616
[2025-11-24 04:16:55] 2025-11-24 03:15:52,385 | INFO     | corecount: 8
[2025-11-24 04:16:55] 2025-11-24 03:15:52,385 | INFO     | event service: False
[2025-11-24 04:16:55] 2025-11-24 03:15:52,385 | INFO     | sizes: {0: 2298622, 1: 2298821, 12: 2298821, 23: 2298849, 33: 2298877, 44: 2298933, 55: 2299089, 66: 2299117, 74: 2299407, 77: 2299435, 91655: 2363959, 91665: 2372
[2025-11-24 04:16:55] 2025-11-24 03:15:52,385 | INFO     | --------------------------------------------------
[2025-11-24 04:16:55] 2025-11-24 03:15:52,385 | INFO     | 
[2025-11-24 04:16:55] 2025-11-24 03:15:52,385 | INFO     | executing command: ls -lF /var/lib/boinc/slots/20
[2025-11-24 04:16:55] 2025-11-24 03:15:52,577 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 04:16:55] 2025-11-24 03:15:52,578 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 04:16:55] 2025-11-24 03:15:52,578 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 04:16:55] 2025-11-24 03:15:52,578 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 04:16:55] 2025-11-24 03:15:52,578 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 04:16:55] 2025-11-24 03:15:52,578 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 04:16:55] 2025-11-24 03:15:52,578 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 04:16:55] 2025-11-24 03:15:52,579 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 04:16:55] 2025-11-24 03:15:52,579 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 04:16:55] 2025-11-24 03:15:52,579 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 04:16:55] 2025-11-24 03:15:52,579 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 04:16:55] 2025-11-24 03:15:52,579 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 04:16:55] 2025-11-24 03:15:52,579 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 04:16:55] 2025-11-24 03:15:52,579 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 04:16:55] 2025-11-24 03:15:52,579 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 04:16:55] 2025-11-24 03:15:52,580 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 04:16:55] 2025-11-24 03:15:52,580 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 04:16:55] 2025-11-24 03:15:52,580 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 04:16:55] 2025-11-24 03:15:52,580 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 04:16:55] 2025-11-24 03:15:52,580 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 04:16:55] 2025-11-24 03:15:52,580 | INFO     | job 6890933830 has completed (purged errors)
[2025-11-24 04:16:55] 2025-11-24 03:15:52,580 | INFO     | overall cleanup function is called
[2025-11-24 04:16:55] 2025-11-24 03:15:53,040 | INFO     | PID=25791 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 04:16:55] 2025-11-24 03:15:53,040 | INFO     | .. there are 9 such processes running
[2025-11-24 04:16:55] 2025-11-24 03:15:53,599 | INFO     | --- collectZombieJob: --- 10, [32616]
[2025-11-24 04:16:55] 2025-11-24 03:15:53,599 | INFO     | zombie collector waiting for pid 32616
[2025-11-24 04:16:55] 2025-11-24 03:15:53,599 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 04:16:55] 2025-11-24 03:15:53,599 | INFO     | collected zombie processes
[2025-11-24 04:16:55] 2025-11-24 03:15:53,600 | INFO     | will attempt to kill all subprocesses of pid=32616
[2025-11-24 04:16:55] 2025-11-24 03:15:53,733 | INFO     | process IDs to be killed: [32616] (in reverse order)
[2025-11-24 04:16:55] 2025-11-24 03:15:54,662 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 04:16:55] 2025-11-24 03:15:54,662 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 04:16:55] 2025-11-24 03:15:54,666 | INFO     | did not find any defunct processes belonging to 32616
[2025-11-24 04:16:55] 2025-11-24 03:15:54,669 | INFO     | did not find any defunct processes belonging to 32616
[2025-11-24 04:16:55] 2025-11-24 03:15:54,733 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 04:16:55] 2025-11-24 03:15:54,733 | INFO     | ready for new job
[2025-11-24 04:16:55] 2025-11-24 03:15:54,733 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 04:16:55] 2025-11-24 03:15:54,740 | INFO     | ***************************************
[2025-11-24 04:16:55] 2025-11-24 03:15:54,741 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 04:16:55] 2025-11-24 03:15:54,741 | INFO     | ***************************************
[2025-11-24 04:16:55] 2025-11-24 03:15:54,741 | INFO     | 
[2025-11-24 04:16:55] 2025-11-24 03:15:54,742 | INFO     | pilot is running in a VM
[2025-11-24 04:16:55] 2025-11-24 03:15:54,742 | INFO     | architecture information:
[2025-11-24 04:16:55] 2025-11-24 03:15:54,749 | INFO     | executing command: cat /etc/os-release
[2025-11-24 04:16:55] 2025-11-24 03:15:54,960 | INFO     | cat /etc/os-release:
[2025-11-24 04:16:55] NAME="CentOS Linux"
[2025-11-24 04:16:55] VERSION="7 (Core)"
[2025-11-24 04:16:55] ID="centos"
[2025-11-24 04:16:55] ID_LIKE="rhel fedora"
[2025-11-24 04:16:55] VERSION_ID="7"
[2025-11-24 04:16:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 04:16:55] ANSI_COLOR="0;31"
[2025-11-24 04:16:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 04:16:55] HOME_URL="https://www.centos.org/"
[2025-11-24 04:16:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 04:16:55] 
[2025-11-24 04:16:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 04:16:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 04:16:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 04:16:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 04:16:55] 
[2025-11-24 04:16:55] 2025-11-24 03:15:54,961 | INFO     | ***************************************
[2025-11-24 04:16:55] 2025-11-24 03:15:55,464 | INFO     | executing command: df -mP /var/lib/boinc/slots/20
[2025-11-24 04:16:55] 2025-11-24 03:15:55,668 | INFO     | sufficient remaining disk space (494954086400 B)
[2025-11-24 04:16:55] 2025-11-24 03:15:55,669 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 04:16:55] 2025-11-24 03:15:55,669 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 04:16:55] 2025-11-24 03:15:55,669 | INFO     | update_server=False
[2025-11-24 04:16:55] 2025-11-24 03:15:55,669 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 04:16:55] 2025-11-24 03:15:55,670 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 04:16:55] 2025-11-24 03:15:55,675 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 04:16:55] 2025-11-24 03:15:55,675 | INFO     | aborting loop
[2025-11-24 04:16:55] 2025-11-24 03:15:55,724 | INFO     | all payload control threads have been joined
[2025-11-24 04:16:55] 2025-11-24 03:15:56,401 | INFO     | all data control threads have been joined
[2025-11-24 04:16:55] 2025-11-24 03:15:56,676 | INFO     | [job] retrieve thread has finished
[2025-11-24 04:16:55] 2025-11-24 03:15:56,681 | INFO     | [job] job monitor thread has finished
[2025-11-24 04:16:55] 2025-11-24 03:15:56,730 | INFO     | [payload] control thread has finished
[2025-11-24 04:16:55] 2025-11-24 03:15:56,817 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 04:16:55] 2025-11-24 03:15:56,961 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 04:16:55] 2025-11-24 03:15:57,020 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 04:16:55] 2025-11-24 03:15:57,122 | INFO     | all job control threads have been joined
[2025-11-24 04:16:55] 2025-11-24 03:15:57,143 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 04:16:55] 2025-11-24 03:15:57,294 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 04:16:55] 2025-11-24 03:15:57,300 | INFO     | [payload] failed_post thread has finished
[2025-11-24 04:16:55] 2025-11-24 03:15:57,406 | INFO     | [data] control thread has finished
[2025-11-24 04:16:55] 2025-11-24 03:15:57,413 | INFO     | [job] validate thread has finished
[2025-11-24 04:16:55] 2025-11-24 03:15:57,495 | INFO     | [data] copytool_in thread has finished
[2025-11-24 04:16:55] 2025-11-24 03:15:57,967 | INFO     | [job] queue monitor thread has finished
[2025-11-24 04:16:55] 2025-11-24 03:15:58,026 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 04:16:55] 2025-11-24 03:15:58,129 | INFO     | [job] control thread has finished
[2025-11-24 04:16:55] 2025-11-24 03:15:58,272 | INFO     | [payload] validate_post thread has finished
[2025-11-24 04:16:55] 2025-11-24 03:15:59,027 | INFO     | [data] copytool_out thread has finished
[2025-11-24 04:16:55] 2025-11-24 03:15:59,678 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 04:16:55] 2025-11-24 03:16:25,201 | INFO     | PID=25791 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 04:16:55] 2025-11-24 03:16:25,201 | INFO     | .. there are 9 such processes running
[2025-11-24 04:16:55] 2025-11-24 03:16:25,202 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 04:16:55] 2025-11-24 03:16:25,202 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 04:16:55] 2025-11-24 03:16:25,202 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 04:16:55] 2025-11-24 03:16:46,921 | INFO     | [monitor] cgroup control has ended
[2025-11-24 04:16:55] 2025-11-24 03:16:47,343 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140266444322624)>', '<ExcThread(monitor, started 140266140837632)>']
[2025-11-24 04:16:55] 2025-11-24 03:16:48,337 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 04:16:55] 2025-11-24 03:16:48,337 | INFO     | [monitor] control thread has ended
[2025-11-24 04:16:55] 2025-11-24 03:16:52,369 | INFO     | all workflow threads have been joined
[2025-11-24 04:16:55] 2025-11-24 03:16:52,369 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 04:16:55] 2025-11-24 03:16:52,369 | INFO     | traces error code: 0
[2025-11-24 04:16:55] 2025-11-24 03:16:52,370 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 04:16:55] 2025-11-24 03:16:52,876 [wrapper] ==== pilot stdout END ====
[2025-11-24 04:16:55] 2025-11-24 03:16:52,951 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 04:16:55] 2025-11-24 03:16:53,016 [wrapper] pilotpid: 25791
[2025-11-24 04:16:55] 2025-11-24 03:16:53,126 [wrapper] Pilot exit status: 0
[2025-11-24 04:16:55] 2025-11-24 03:16:53,545 [wrapper] pandaids: 6890933830
[2025-11-24 04:16:55] 2025-11-24 03:16:54,013 [wrapper] cleanup supervisor_pilot  5122 25792
[2025-11-24 04:16:55] 2025-11-24 03:16:54,032 [wrapper] Test setup, not cleaning
[2025-11-24 04:16:55] 2025-11-24 03:16:54,041 [wrapper] apfmon messages muted
[2025-11-24 04:16:55] 2025-11-24 03:16:54,051 [wrapper] ==== wrapper stdout END ====
[2025-11-24 04:16:55] 2025-11-24 03:16:54,062 [wrapper] ==== wrapper stderr END ====
[2025-11-24 04:16:55]  *** Error codes and diagnostics ***
[2025-11-24 04:16:55]     "exeErrorCode": 0,
[2025-11-24 04:16:55]     "exeErrorDiag": "",
[2025-11-24 04:16:55]     "pilotErrorCode": 0,
[2025-11-24 04:16:55]     "pilotErrorDiag": "",
[2025-11-24 04:16:55]  *** Listing of results directory ***
[2025-11-24 04:16:55] total 1320876
[2025-11-24 04:16:55] -rw-r--r--. 1 boinc boinc    576529 Nov 18 03:22 pilot3.tar.gz
[2025-11-24 04:16:55] -rw-r--r--. 1 boinc boinc      5112 Nov 18 03:59 queuedata.json
[2025-11-24 04:16:55] -rwx------. 1 boinc boinc     36292 Nov 18 03:59 runpilot2-wrapper.sh
[2025-11-24 04:16:55] -rw-r--r--. 1 boinc boinc       100 Nov 23 02:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 04:16:55] -rwxr-xr-x. 1 boinc boinc      7986 Nov 23 02:41 run_atlas
[2025-11-24 04:16:55] -rw-r--r--. 1 boinc boinc       105 Nov 23 02:41 job.xml
[2025-11-24 04:16:55] -rw-r--r--. 2 boinc boinc 409281692 Nov 23 02:41 EVNT.47483658._000064.pool.root.1
[2025-11-24 04:16:55] -rw-r--r--. 1 boinc boinc      6392 Nov 23 02:41 init_data.xml
[2025-11-24 04:16:55] -rw-r--r--. 2 boinc boinc     15120 Nov 23 02:41 start_atlas.sh
[2025-11-24 04:16:55] drwxrwx--x. 2 boinc boinc        68 Nov 23 02:41 shared
[2025-11-24 04:16:55] -rw-r--r--. 2 boinc boinc    590101 Nov 23 02:41 input.tar.gz
[2025-11-24 04:16:55] -rw-r--r--. 1 boinc boinc         0 Nov 23 02:41 boinc_lockfile
[2025-11-24 04:16:55] -rw-r--r--. 1 boinc boinc      2771 Nov 23 02:41 pandaJob.out
[2025-11-24 04:16:55] -rw-------. 1 boinc boinc    989784 Nov 23 02:44 agis_schedconf.cvmfs.json
[2025-11-24 04:16:55] drwx------. 5 boinc boinc      4096 Nov 23 02:44 pilot3
[2025-11-24 04:16:55] -rw-r--r--. 1 boinc boinc       533 Nov 24 03:48 boinc_task_state.xml
[2025-11-24 04:16:55] -rw-------. 1 boinc boinc 909799472 Nov 24 04:12 HITS.47483661._000318.pool.root.1
[2025-11-24 04:16:55] -rw-------. 1 boinc boinc      1031 Nov 24 04:14 memory_monitor_summary.json
[2025-11-24 04:16:55] -rw-------. 1 boinc boinc   1526164 Nov 24 04:14 agis_ddmendpoints.agis.ALL.json
[2025-11-24 04:16:55] -rw-------. 1 boinc boinc   2564218 Nov 24 04:14 log.47483661._000318.job.log.tgz.1
[2025-11-24 04:16:55] -rw-------. 1 boinc boinc      8619 Nov 24 04:15 heartbeat.json
[2025-11-24 04:16:55] -rw-r--r--. 1 boinc boinc        29 Nov 24 04:16 wrapper_checkpoint.txt
[2025-11-24 04:16:55] -rw-r--r--. 1 boinc boinc      8192 Nov 24 04:16 boinc_mmap_file
[2025-11-24 04:16:55] -rw-------. 1 boinc boinc        95 Nov 24 04:16 pilot_heartbeat.json
[2025-11-24 04:16:55] -rw-------. 1 boinc boinc      4885 Nov 24 04:16 pilotlog.txt
[2025-11-24 04:16:55] -rw-------. 1 boinc boinc  12227907 Nov 24 04:16 log.47483661._000318.job.log.1
[2025-11-24 04:16:55] -rw-------. 1 boinc boinc       353 Nov 24 04:16 output.list
[2025-11-24 04:16:55] -rw-r--r--. 1 boinc boinc       620 Nov 24 04:16 runtime_log
[2025-11-24 04:16:55] -rw-------. 1 boinc boinc  14807040 Nov 24 04:16 result.tar.gz
[2025-11-24 04:16:55] -rw-r--r--. 1 boinc boinc      8717 Nov 24 04:16 runtime_log.err
[2025-11-24 04:16:55] -rw-------. 1 boinc boinc       662 Nov 24 04:16 op7KDmX7Qf8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmx4JODmLj95xn.diag
[2025-11-24 04:16:55] -rw-r--r--. 1 boinc boinc     21510 Nov 24 04:16 stderr.txt
[2025-11-24 04:16:55] HITS file was successfully produced:
[2025-11-24 04:16:55] -rw-------. 1 boinc boinc 909799472 Nov 24 04:12 shared/HITS.pool.root.1
[2025-11-24 04:16:55]  *** Contents of shared directory: ***
[2025-11-24 04:16:55] total 1303228
[2025-11-24 04:16:55] -rw-r--r--. 2 boinc boinc 409281692 Nov 23 02:41 ATLAS.root_0
[2025-11-24 04:16:55] -rw-r--r--. 2 boinc boinc     15120 Nov 23 02:41 start_atlas.sh
[2025-11-24 04:16:55] -rw-r--r--. 2 boinc boinc    590101 Nov 23 02:41 input.tar.gz
[2025-11-24 04:16:55] -rw-------. 1 boinc boinc 909799472 Nov 24 04:12 HITS.pool.root.1
[2025-11-24 04:16:55] -rw-------. 1 boinc boinc  14807040 Nov 24 04:16 result.tar.gz
04:16:57 (21816): run_atlas exited; CPU time 331819.598003
04:16:57 (21816): called boinc_finish(0)

</stderr_txt>
]]>

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