Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:21:13 (11054): wrapper (7.7.26015): starting
00:21:13 (11054): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 00:21:13] Arguments: --nthreads 8
[2025-11-23 00:21:13] Threads: 8
[2025-11-23 00:21:13] Checking for CVMFS
[2025-11-23 00:21:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 00:21:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 00:21:14] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 00:21:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 00:21:15] 2.11.2.0 2281 167068 134784 153190 3 75 14050418 25165825 4632 130560 2 54297125 99.897 25833110 2408 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-23 00:21:15] CVMFS is ok
[2025-11-23 00:21:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 00:21:15] Checking for apptainer binary...
[2025-11-23 00:21:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 00:21:15] Running /usr/bin/apptainer --version
[2025-11-23 00:21:15] apptainer version 1.3.2-1.el7
[2025-11-23 00:21:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 00:21:32] cg-vwn445.simple-grid.lan
[2025-11-23 00:21:32] apptainer works
[2025-11-23 00:21:32] Set ATHENA_PROC_NUMBER=8
[2025-11-23 00:21:32] Set ATHENA_CORE_NUMBER=8
[2025-11-23 00:21:32] Starting ATLAS job with PandaID=6892546251
[2025-11-23 00:21:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 01:57:33]  *** The last 200 lines of the pilot log: ***
[2025-11-24 01:57:33] 2025-11-24 00:56:46,285 | INFO     | monitor loop #6192: job 0:6892546251 is in state 'finished'
[2025-11-24 01:57:33] 2025-11-24 00:56:46,285 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:57:33] 2025-11-24 00:56:46,644 | INFO     | time since job start (91870s) is within the limit (172800.0s)
[2025-11-24 01:57:33] 2025-11-24 00:56:48,652 | INFO     | time since job start (91872s) is within the limit (172800.0s)
[2025-11-24 01:57:33] 2025-11-24 00:56:48,797 | INFO     | monitor loop #6193: job 0:6892546251 is in state 'finished'
[2025-11-24 01:57:33] 2025-11-24 00:56:48,797 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:57:33] 2025-11-24 00:56:50,659 | INFO     | time since job start (91874s) is within the limit (172800.0s)
[2025-11-24 01:57:33] 2025-11-24 00:56:51,302 | INFO     | monitor loop #6194: job 0:6892546251 is in state 'finished'
[2025-11-24 01:57:33] 2025-11-24 00:56:51,302 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:57:33] 2025-11-24 00:56:51,808 | INFO     | PID=14842 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 01:57:33] 2025-11-24 00:56:51,809 | INFO     | .. there are 9 such processes running
[2025-11-24 01:57:33] 2025-11-24 00:56:52,812 | INFO     | time since job start (91876s) is within the limit (172800.0s)
[2025-11-24 01:57:33] 2025-11-24 00:56:53,807 | INFO     | monitor loop #6195: job 0:6892546251 is in state 'finished'
[2025-11-24 01:57:33] 2025-11-24 00:56:53,807 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:57:33] 2025-11-24 00:56:54,819 | INFO     | time since job start (91878s) is within the limit (172800.0s)
[2025-11-24 01:57:33] 2025-11-24 00:56:55,749 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 01:57:33] 2025-11-24 00:56:55,750 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-24 01:57:33] 2025-11-24 00:56:55,752 | INFO     | using path: /var/lib/boinc/slots/16/PanDA_Pilot-6892546251/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 01:57:33] 2025-11-24 00:56:55,753 | INFO     | extracted standard info from prmon json
[2025-11-24 01:57:33] 2025-11-24 00:56:55,754 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 01:57:33] 2025-11-24 00:56:55,754 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 01:57:33] 2025-11-24 00:56:55,801 | INFO     | fitting pss+swap vs Time
[2025-11-24 01:57:33] 2025-11-24 00:56:55,804 | INFO     | sum of square deviations: 1038183579981.2653
[2025-11-24 01:57:33] 2025-11-24 00:56:55,895 | INFO     | sum of deviations: 4919374539379.348
[2025-11-24 01:57:33] 2025-11-24 00:56:55,896 | INFO     | mean x: 1763900049.8663101
[2025-11-24 01:57:33] 2025-11-24 00:56:55,896 | INFO     | mean y: 2843069.151737968
[2025-11-24 01:57:33] 2025-11-24 00:56:55,896 | INFO     | intersect: -8355298171.6092415
[2025-11-24 01:57:33] 2025-11-24 00:56:55,898 | INFO     | chi2: 24.68106075186011
[2025-11-24 01:57:33] 2025-11-24 00:56:55,901 | INFO     | sum of square deviations: 1027809385611.8975
[2025-11-24 01:57:33] 2025-11-24 00:56:55,983 | INFO     | sum of deviations: 5413691475276.647
[2025-11-24 01:57:33] 2025-11-24 00:56:55,984 | INFO     | mean x: 1763899897.370892
[2025-11-24 01:57:33] 2025-11-24 00:56:55,984 | INFO     | mean y: 2850334.637156271
[2025-11-24 01:57:33] 2025-11-24 00:56:55,984 | INFO     | intersect: -9287987024.230814
[2025-11-24 01:57:33] 2025-11-24 00:56:55,986 | INFO     | chi2: 21.55761568983735
[2025-11-24 01:57:33] 2025-11-24 00:56:55,986 | INFO     | current chi2=21.55761568983735 (change=12.655230232709345 %)
[2025-11-24 01:57:33] 2025-11-24 00:56:55,986 | INFO     | right removable region: 1490
[2025-11-24 01:57:33] 2025-11-24 00:56:55,989 | INFO     | sum of square deviations: 1027808138771.8969
[2025-11-24 01:57:33] 2025-11-24 00:56:56,081 | INFO     | sum of deviations: 4273534785559.7725
[2025-11-24 01:57:33] 2025-11-24 00:56:56,081 | INFO     | mean x: 1763900202.370892
[2025-11-24 01:57:33] 2025-11-24 00:56:56,081 | INFO     | mean y: 2852562.063715627
[2025-11-24 01:57:33] 2025-11-24 00:56:56,082 | INFO     | intersect: -7331287525.691388
[2025-11-24 01:57:33] 2025-11-24 00:56:56,083 | INFO     | chi2: 19.56324218424333
[2025-11-24 01:57:33] 2025-11-24 00:56:56,084 | INFO     | current chi2=19.56324218424333 (change=20.735812852902082 %)
[2025-11-24 01:57:33] 2025-11-24 00:56:56,084 | INFO     | left removable region: 10
[2025-11-24 01:57:33] 2025-11-24 00:56:56,086 | INFO     | sum of square deviations: 1005227449355.0698
[2025-11-24 01:57:33] 2025-11-24 00:56:56,143 | INFO     | sum of deviations: 4295346448971.7515
[2025-11-24 01:57:33] 2025-11-24 00:56:56,143 | INFO     | mean x: 1763900171.881081
[2025-11-24 01:57:33] 2025-11-24 00:56:56,143 | INFO     | mean y: 2870200.027027027
[2025-11-24 01:57:33] 2025-11-24 00:56:56,144 | INFO     | intersect: -7534292005.8906555
[2025-11-24 01:57:33] 2025-11-24 00:56:56,145 | INFO     | chi2: 11.58935300821001
[2025-11-24 01:57:33] 2025-11-24 00:56:56,146 | INFO     | current memory leak: 4.27 B/s (using 1480 data points, chi2=11.59)
[2025-11-24 01:57:33] 2025-11-24 00:56:56,149 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-24 01:57:33] 2025-11-24 00:56:56,149 | INFO     | ..............................
[2025-11-24 01:57:33] 2025-11-24 00:56:56,149 | INFO     | . Timing measurements:
[2025-11-24 01:57:33] 2025-11-24 00:56:56,149 | INFO     | . get job = 0 s
[2025-11-24 01:57:33] 2025-11-24 00:56:56,149 | INFO     | . initial setup = 3 s
[2025-11-24 01:57:33] 2025-11-24 00:56:56,149 | INFO     | . payload setup = 166 s
[2025-11-24 01:57:33] 2025-11-24 00:56:56,149 | INFO     | . stage-in = 0 s
[2025-11-24 01:57:33] 2025-11-24 00:56:56,150 | INFO     | . payload execution = 91410 s
[2025-11-24 01:57:33] 2025-11-24 00:56:56,150 | INFO     | . stage-out = 5 s
[2025-11-24 01:57:33] 2025-11-24 00:56:56,150 | INFO     | . log creation = 2 s
[2025-11-24 01:57:33] 2025-11-24 00:56:56,150 | INFO     | ..............................
[2025-11-24 01:57:33] 2025-11-24 00:56:56,709 | INFO     | 
[2025-11-24 01:57:33] 2025-11-24 00:56:56,709 | INFO     | job summary report
[2025-11-24 01:57:33] 2025-11-24 00:56:56,710 | INFO     | --------------------------------------------------
[2025-11-24 01:57:33] 2025-11-24 00:56:56,710 | INFO     | PanDA job id: 6892546251
[2025-11-24 01:57:33] 2025-11-24 00:56:56,710 | INFO     | task id: 47493029
[2025-11-24 01:57:33] 2025-11-24 00:56:56,710 | INFO     | errors: (none)
[2025-11-24 01:57:33] 2025-11-24 00:56:56,710 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 01:57:33] 2025-11-24 00:56:56,710 | INFO     | pilot state: finished 
[2025-11-24 01:57:33] 2025-11-24 00:56:56,710 | INFO     | transexitcode: 0
[2025-11-24 01:57:33] 2025-11-24 00:56:56,710 | INFO     | exeerrorcode: 0
[2025-11-24 01:57:33] 2025-11-24 00:56:56,710 | INFO     | exeerrordiag: 
[2025-11-24 01:57:33] 2025-11-24 00:56:56,710 | INFO     | exitcode: 0
[2025-11-24 01:57:33] 2025-11-24 00:56:56,710 | INFO     | exitmsg: OK
[2025-11-24 01:57:33] 2025-11-24 00:56:56,711 | INFO     | cpuconsumptiontime: 335116 s
[2025-11-24 01:57:33] 2025-11-24 00:56:56,711 | INFO     | nevents: 1000
[2025-11-24 01:57:33] 2025-11-24 00:56:56,711 | INFO     | neventsw: 0
[2025-11-24 01:57:33] 2025-11-24 00:56:56,711 | INFO     | pid: 21382
[2025-11-24 01:57:33] 2025-11-24 00:56:56,711 | INFO     | pgrp: 21382
[2025-11-24 01:57:33] 2025-11-24 00:56:56,711 | INFO     | corecount: 8
[2025-11-24 01:57:33] 2025-11-24 00:56:56,711 | INFO     | event service: False
[2025-11-24 01:57:33] 2025-11-24 00:56:56,711 | INFO     | sizes: {0: 2297968, 1: 2298825, 2: 2298825, 12: 2298853, 23: 2298881, 34: 2298909, 45: 2299065, 56: 2299093, 66: 2299121, 77: 2299149, 88: 2299205, 91: 2299775, 99
[2025-11-24 01:57:33] 2025-11-24 00:56:56,711 | INFO     | --------------------------------------------------
[2025-11-24 01:57:33] 2025-11-24 00:56:56,711 | INFO     | 
[2025-11-24 01:57:33] 2025-11-24 00:56:56,711 | INFO     | executing command: ls -lF /var/lib/boinc/slots/16
[2025-11-24 01:57:33] 2025-11-24 00:56:56,826 | INFO     | time since job start (91880s) is within the limit (172800.0s)
[2025-11-24 01:57:33] 2025-11-24 00:56:57,344 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 01:57:33] 2025-11-24 00:56:57,344 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 01:57:33] 2025-11-24 00:56:57,344 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 01:57:33] 2025-11-24 00:56:57,344 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 01:57:33] 2025-11-24 00:56:57,344 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 01:57:33] 2025-11-24 00:56:57,344 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 01:57:33] 2025-11-24 00:56:57,344 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 01:57:33] 2025-11-24 00:56:57,344 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 01:57:33] 2025-11-24 00:56:57,345 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 01:57:33] 2025-11-24 00:56:57,345 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 01:57:33] 2025-11-24 00:56:57,345 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 01:57:33] 2025-11-24 00:56:57,345 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 01:57:33] 2025-11-24 00:56:57,345 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 01:57:33] 2025-11-24 00:56:57,345 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 01:57:33] 2025-11-24 00:56:57,345 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 01:57:33] 2025-11-24 00:56:57,345 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 01:57:33] 2025-11-24 00:56:57,345 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 01:57:33] 2025-11-24 00:56:57,346 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 01:57:33] 2025-11-24 00:56:57,346 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 01:57:33] 2025-11-24 00:56:57,346 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 01:57:33] 2025-11-24 00:56:57,346 | INFO     | job 6892546251 has completed (purged errors)
[2025-11-24 01:57:33] 2025-11-24 00:56:57,346 | INFO     | overall cleanup function is called
[2025-11-24 01:57:33] 2025-11-24 00:56:58,368 | INFO     | --- collectZombieJob: --- 10, [21382]
[2025-11-24 01:57:33] 2025-11-24 00:56:58,368 | INFO     | zombie collector waiting for pid 21382
[2025-11-24 01:57:33] 2025-11-24 00:56:58,369 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 01:57:33] 2025-11-24 00:56:58,369 | INFO     | collected zombie processes
[2025-11-24 01:57:33] 2025-11-24 00:56:58,369 | INFO     | will attempt to kill all subprocesses of pid=21382
[2025-11-24 01:57:33] 2025-11-24 00:56:58,487 | INFO     | process IDs to be killed: [21382] (in reverse order)
[2025-11-24 01:57:33] 2025-11-24 00:56:59,004 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 01:57:33] 2025-11-24 00:56:59,004 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 01:57:33] 2025-11-24 00:56:59,008 | INFO     | did not find any defunct processes belonging to 21382
[2025-11-24 01:57:33] 2025-11-24 00:56:59,012 | INFO     | did not find any defunct processes belonging to 21382
[2025-11-24 01:57:33] 2025-11-24 00:56:59,014 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 01:57:33] 2025-11-24 00:56:59,015 | INFO     | ready for new job
[2025-11-24 01:57:33] 2025-11-24 00:56:59,015 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 01:57:33] 2025-11-24 00:56:59,022 | INFO     | ***************************************
[2025-11-24 01:57:33] 2025-11-24 00:56:59,023 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 01:57:33] 2025-11-24 00:56:59,023 | INFO     | ***************************************
[2025-11-24 01:57:33] 2025-11-24 00:56:59,023 | INFO     | 
[2025-11-24 01:57:33] 2025-11-24 00:56:59,024 | INFO     | pilot is running in a VM
[2025-11-24 01:57:33] 2025-11-24 00:56:59,024 | INFO     | architecture information:
[2025-11-24 01:57:33] 2025-11-24 00:56:59,025 | INFO     | executing command: cat /etc/os-release
[2025-11-24 01:57:33] 2025-11-24 00:56:59,050 | INFO     | cat /etc/os-release:
[2025-11-24 01:57:33] NAME="CentOS Linux"
[2025-11-24 01:57:33] VERSION="7 (Core)"
[2025-11-24 01:57:33] ID="centos"
[2025-11-24 01:57:33] ID_LIKE="rhel fedora"
[2025-11-24 01:57:33] VERSION_ID="7"
[2025-11-24 01:57:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 01:57:33] ANSI_COLOR="0;31"
[2025-11-24 01:57:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 01:57:33] HOME_URL="https://www.centos.org/"
[2025-11-24 01:57:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 01:57:33] 
[2025-11-24 01:57:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 01:57:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 01:57:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 01:57:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 01:57:33] 
[2025-11-24 01:57:33] 2025-11-24 00:56:59,050 | INFO     | ***************************************
[2025-11-24 01:57:33] 2025-11-24 00:56:59,554 | INFO     | executing command: df -mP /var/lib/boinc/slots/16
[2025-11-24 01:57:33] 2025-11-24 00:56:59,609 | INFO     | sufficient remaining disk space (493439942656 B)
[2025-11-24 01:57:33] 2025-11-24 00:56:59,610 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 01:57:33] 2025-11-24 00:56:59,611 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 01:57:33] 2025-11-24 00:56:59,611 | INFO     | update_server=False
[2025-11-24 01:57:33] 2025-11-24 00:56:59,611 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 01:57:33] 2025-11-24 00:56:59,612 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 01:57:33] 2025-11-24 00:56:59,618 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 01:57:33] 2025-11-24 00:56:59,792 | INFO     | all job control threads have been joined
[2025-11-24 01:57:33] 2025-11-24 00:56:59,841 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 01:57:33] 2025-11-24 00:56:59,842 | INFO     | aborting loop
[2025-11-24 01:57:33] 2025-11-24 00:57:00,416 | INFO     | all data control threads have been joined
[2025-11-24 01:57:33] 2025-11-24 00:57:00,618 | INFO     | [job] retrieve thread has finished
[2025-11-24 01:57:33] 2025-11-24 00:57:00,676 | INFO     | [payload] failed_post thread has finished
[2025-11-24 01:57:33] 2025-11-24 00:57:00,798 | INFO     | [job] control thread has finished
[2025-11-24 01:57:33] 2025-11-24 00:57:00,848 | INFO     | [job] job monitor thread has finished
[2025-11-24 01:57:33] 2025-11-24 00:57:00,863 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 01:57:33] 2025-11-24 00:57:01,053 | INFO     | [data] copytool_in thread has finished
[2025-11-24 01:57:33] 2025-11-24 00:57:01,077 | INFO     | [job] validate thread has finished
[2025-11-24 01:57:33] 2025-11-24 00:57:01,118 | INFO     | all payload control threads have been joined
[2025-11-24 01:57:33] 2025-11-24 00:57:01,301 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 01:57:33] 2025-11-24 00:57:01,340 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 01:57:33] 2025-11-24 00:57:01,421 | INFO     | [data] control thread has finished
[2025-11-24 01:57:33] 2025-11-24 00:57:01,625 | INFO     | [data] copytool_out thread has finished
[2025-11-24 01:57:33] 2025-11-24 00:57:01,751 | INFO     | [payload] validate_post thread has finished
[2025-11-24 01:57:33] 2025-11-24 00:57:01,814 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 01:57:33] 2025-11-24 00:57:02,074 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 01:57:33] 2025-11-24 00:57:02,123 | INFO     | [payload] control thread has finished
[2025-11-24 01:57:33] 2025-11-24 00:57:02,307 | INFO     | [job] queue monitor thread has finished
[2025-11-24 01:57:33] 2025-11-24 00:57:03,621 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 01:57:33] 2025-11-24 00:57:16,152 | INFO     | [monitor] cgroup control has ended
[2025-11-24 01:57:33] 2025-11-24 00:57:16,617 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140691376629568)>', '<ExcThread(monitor, started 140690948339456)>']
[2025-11-24 01:57:33] 2025-11-24 00:57:21,644 | INFO     | all workflow threads have been joined
[2025-11-24 01:57:33] 2025-11-24 00:57:21,644 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 01:57:33] 2025-11-24 00:57:21,645 | INFO     | traces error code: 0
[2025-11-24 01:57:33] 2025-11-24 00:57:21,645 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 01:57:33] 2025-11-24 00:57:30,021 | INFO     | PID=14842 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 01:57:33] 2025-11-24 00:57:30,022 | INFO     | .. there are 9 such processes running
[2025-11-24 01:57:33] 2025-11-24 00:57:30,024 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 01:57:33] 2025-11-24 00:57:30,024 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 01:57:33] 2025-11-24 00:57:30,024 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 01:57:33] 2025-11-24 00:57:30,024 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 01:57:33] 2025-11-24 00:57:30,024 | INFO     | [monitor] control thread has ended
[2025-11-24 01:57:33] 2025-11-24 00:57:30,310 [wrapper] ==== pilot stdout END ====
[2025-11-24 01:57:33] 2025-11-24 00:57:30,319 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 01:57:33] 2025-11-24 00:57:30,325 [wrapper] pilotpid: 14842
[2025-11-24 01:57:33] 2025-11-24 00:57:30,333 [wrapper] Pilot exit status: 0
[2025-11-24 01:57:33] 2025-11-24 00:57:30,508 [wrapper] pandaids: 6892546251
[2025-11-24 01:57:33] 2025-11-24 00:57:30,667 [wrapper] cleanup supervisor_pilot 24649 14843
[2025-11-24 01:57:33] 2025-11-24 00:57:30,689 [wrapper] Test setup, not cleaning
[2025-11-24 01:57:33] 2025-11-24 00:57:30,761 [wrapper] apfmon messages muted
[2025-11-24 01:57:33] 2025-11-24 00:57:30,868 [wrapper] ==== wrapper stdout END ====
[2025-11-24 01:57:33] 2025-11-24 00:57:30,938 [wrapper] ==== wrapper stderr END ====
[2025-11-24 01:57:33]  *** Error codes and diagnostics ***
[2025-11-24 01:57:33]     "exeErrorCode": 0,
[2025-11-24 01:57:33]     "exeErrorDiag": "",
[2025-11-24 01:57:33]     "pilotErrorCode": 0,
[2025-11-24 01:57:33]     "pilotErrorDiag": "",
[2025-11-24 01:57:33]  *** Listing of results directory ***
[2025-11-24 01:57:33] total 1321820
[2025-11-24 01:57:33] -rw-r--r--. 1 boinc boinc    576529 Nov 19 09:16 pilot3.tar.gz
[2025-11-24 01:57:33] -rw-r--r--. 1 boinc boinc      5112 Nov 19 09:18 queuedata.json
[2025-11-24 01:57:33] -rwx------. 1 boinc boinc     36292 Nov 19 09:19 runpilot2-wrapper.sh
[2025-11-24 01:57:33] -rw-r--r--. 1 boinc boinc       100 Nov 23 00:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 01:57:33] -rwxr-xr-x. 1 boinc boinc      7986 Nov 23 00:21 run_atlas
[2025-11-24 01:57:33] -rw-r--r--. 1 boinc boinc       105 Nov 23 00:21 job.xml
[2025-11-24 01:57:33] -rw-r--r--. 1 boinc boinc      6392 Nov 23 00:21 init_data.xml
[2025-11-24 01:57:33] -rw-r--r--. 2 boinc boinc 412579540 Nov 23 00:21 EVNT.47493027._000291.pool.root.1
[2025-11-24 01:57:33] -rw-r--r--. 2 boinc boinc     15120 Nov 23 00:21 start_atlas.sh
[2025-11-24 01:57:33] drwxrwx--x. 2 boinc boinc        68 Nov 23 00:21 shared
[2025-11-24 01:57:33] -rw-r--r--. 2 boinc boinc    590104 Nov 23 00:21 input.tar.gz
[2025-11-24 01:57:33] -rw-r--r--. 1 boinc boinc         0 Nov 23 00:21 boinc_lockfile
[2025-11-24 01:57:33] -rw-r--r--. 1 boinc boinc      2773 Nov 23 00:21 pandaJob.out
[2025-11-24 01:57:33] -rw-------. 1 boinc boinc    989784 Nov 23 00:25 agis_schedconf.cvmfs.json
[2025-11-24 01:57:33] drwx------. 5 boinc boinc      4096 Nov 23 00:25 pilot3
[2025-11-24 01:57:33] -rw-r--r--. 1 boinc boinc       533 Nov 24 01:37 boinc_task_state.xml
[2025-11-24 01:57:33] -rw-------. 1 boinc boinc 907332611 Nov 24 01:53 HITS.47493029._002870.pool.root.1
[2025-11-24 01:57:33] -rw-------. 1 boinc boinc      1031 Nov 24 01:55 memory_monitor_summary.json
[2025-11-24 01:57:33] -rw-------. 1 boinc boinc   1526164 Nov 24 01:55 agis_ddmendpoints.agis.ALL.json
[2025-11-24 01:57:33] -rw-------. 1 boinc boinc   2579091 Nov 24 01:55 log.47493029._002870.job.log.tgz.1
[2025-11-24 01:57:33] -rw-------. 1 boinc boinc      8630 Nov 24 01:56 heartbeat.json
[2025-11-24 01:57:33] -rw-r--r--. 1 boinc boinc      8192 Nov 24 01:57 boinc_mmap_file
[2025-11-24 01:57:33] -rw-r--r--. 1 boinc boinc        29 Nov 24 01:57 wrapper_checkpoint.txt
[2025-11-24 01:57:33] -rw-------. 1 boinc boinc        95 Nov 24 01:57 pilot_heartbeat.json
[2025-11-24 01:57:33] -rw-------. 1 boinc boinc       820 Nov 24 01:57 pilotlog.txt
[2025-11-24 01:57:33] -rw-------. 1 boinc boinc  12284518 Nov 24 01:57 log.47493029._002870.job.log.1
[2025-11-24 01:57:33] -rw-------. 1 boinc boinc       353 Nov 24 01:57 output.list
[2025-11-24 01:57:33] -rw-r--r--. 1 boinc boinc       620 Nov 24 01:57 runtime_log
[2025-11-24 01:57:33] -rw-------. 1 boinc boinc  14878720 Nov 24 01:57 result.tar.gz
[2025-11-24 01:57:33] -rw-r--r--. 1 boinc boinc      8717 Nov 24 01:57 runtime_log.err
[2025-11-24 01:57:33] -rw-------. 1 boinc boinc       662 Nov 24 01:57 Rd4NDmLasf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmN5FKDmIHGd1m.diag
[2025-11-24 01:57:33] -rw-r--r--. 1 boinc boinc     21504 Nov 24 01:57 stderr.txt
[2025-11-24 01:57:33] HITS file was successfully produced:
[2025-11-24 01:57:33] -rw-------. 1 boinc boinc 907332611 Nov 24 01:53 shared/HITS.pool.root.1
[2025-11-24 01:57:33]  *** Contents of shared directory: ***
[2025-11-24 01:57:33] total 1304108
[2025-11-24 01:57:33] -rw-r--r--. 2 boinc boinc 412579540 Nov 23 00:21 ATLAS.root_0
[2025-11-24 01:57:33] -rw-r--r--. 2 boinc boinc     15120 Nov 23 00:21 start_atlas.sh
[2025-11-24 01:57:33] -rw-r--r--. 2 boinc boinc    590104 Nov 23 00:21 input.tar.gz
[2025-11-24 01:57:33] -rw-------. 1 boinc boinc 907332611 Nov 24 01:53 HITS.pool.root.1
[2025-11-24 01:57:33] -rw-------. 1 boinc boinc  14878720 Nov 24 01:57 result.tar.gz
01:57:34 (11054): run_atlas exited; CPU time 335647.411296
01:57:34 (11054): called boinc_finish(0)

</stderr_txt>
]]>

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