Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:13:13 (46003): wrapper (7.7.26015): starting
16:13:13 (46003): wrapper: running run_atlas (--nthreads 8)
[2025-11-19 16:13:13] Arguments: --nthreads 8
[2025-11-19 16:13:13] Threads: 8
[2025-11-19 16:13:13] Checking for CVMFS
[2025-11-19 16:13:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 16:13:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 16:13:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 16:13:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 16:13:13] 2.11.2.0 5808 160817 106456 153056 0 81 14439813 18432001 1 130560 0 102590926 99.945 8205890 6483 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-11-19 16:13:13] CVMFS is ok
[2025-11-19 16:13:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-19 16:13:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-19 16:13:13] Further information can be found at the LHC@home message board.
[2025-11-19 16:13:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 16:13:13] Checking for apptainer binary...
[2025-11-19 16:13:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 16:13:13] Running /usr/bin/apptainer --version
[2025-11-19 16:13:13] apptainer version 1.3.2-1.el7
[2025-11-19 16:13:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 16:13:14] c-9-34.aglt2.org
[2025-11-19 16:13:14] apptainer works
[2025-11-19 16:13:14] Set ATHENA_PROC_NUMBER=8
[2025-11-19 16:13:14] Set ATHENA_CORE_NUMBER=8
[2025-11-19 16:13:14] Starting ATLAS job with PandaID=6891587814
[2025-11-19 16:13:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 01:28:16]  *** The last 200 lines of the pilot log: ***
[2025-11-20 01:28:16] 2025-11-20 06:27:30,148 | INFO     | time since job start (33246s) is within the limit (172800.0s)
[2025-11-20 01:28:16] 2025-11-20 06:27:30,365 | INFO     | monitor loop #2483: job 0:6891587814 is in state 'finished'
[2025-11-20 01:28:16] 2025-11-20 06:27:30,365 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 01:28:16] 2025-11-20 06:27:30,894 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-20 01:28:16] 2025-11-20 06:27:30,900 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2592.8236875000007
[2025-11-20 01:28:16] 2025-11-20 06:27:30,904 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6891587814/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 01:28:16] 2025-11-20 06:27:30,906 | INFO     | extracted standard info from prmon json
[2025-11-20 01:28:16] 2025-11-20 06:27:30,906 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 01:28:16] 2025-11-20 06:27:30,906 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 01:28:16] 2025-11-20 06:27:30,921 | INFO     | fitting pss+swap vs Time
[2025-11-20 01:28:16] 2025-11-20 06:27:30,922 | INFO     | sum of square deviations: 50195694640.0
[2025-11-20 01:28:16] 2025-11-20 06:27:30,932 | INFO     | sum of deviations: 389555330865.00006
[2025-11-20 01:28:16] 2025-11-20 06:27:30,932 | INFO     | mean x: 1763603419.0
[2025-11-20 01:28:16] 2025-11-20 06:27:30,932 | INFO     | mean y: 2871859.4018348623
[2025-11-20 01:28:16] 2025-11-20 06:27:30,933 | INFO     | intersect: -13683981531.719807
[2025-11-20 01:28:16] 2025-11-20 06:27:30,933 | INFO     | chi2: 3.793813697078416
[2025-11-20 01:28:16] 2025-11-20 06:27:30,934 | INFO     | sum of square deviations: 48826794555.0
[2025-11-20 01:28:16] 2025-11-20 06:27:30,943 | INFO     | sum of deviations: 526911320622.00037
[2025-11-20 01:28:16] 2025-11-20 06:27:30,943 | INFO     | mean x: 1763603266.5
[2025-11-20 01:28:16] 2025-11-20 06:27:30,943 | INFO     | mean y: 2887137.277777778
[2025-11-20 01:28:16] 2025-11-20 06:27:30,944 | INFO     | intersect: -19028927969.037235
[2025-11-20 01:28:16] 2025-11-20 06:27:30,944 | INFO     | chi2: 1.7313674756077837
[2025-11-20 01:28:16] 2025-11-20 06:27:30,945 | INFO     | current chi2=1.7313674756077837 (change=54.363402795949234 %)
[2025-11-20 01:28:16] 2025-11-20 06:27:30,945 | INFO     | sum of square deviations: 47483011220.0
[2025-11-20 01:28:16] 2025-11-20 06:27:30,953 | INFO     | sum of deviations: 528406408174.0
[2025-11-20 01:28:16] 2025-11-20 06:27:30,954 | INFO     | mean x: 1763603114.0
[2025-11-20 01:28:16] 2025-11-20 06:27:30,954 | INFO     | mean y: 2887298.308411215
[2025-11-20 01:28:16] 2025-11-20 06:27:30,954 | INFO     | intersect: -19623062340.721695
[2025-11-20 01:28:16] 2025-11-20 06:27:30,955 | INFO     | chi2: 1.6907628223698923
[2025-11-20 01:28:16] 2025-11-20 06:27:30,955 | INFO     | current chi2=1.6907628223698923 (change=2.345235994665861 %)
[2025-11-20 01:28:16] 2025-11-20 06:27:30,955 | INFO     | right removable region: 534
[2025-11-20 01:28:16] 2025-11-20 06:27:30,956 | INFO     | sum of square deviations: 48826794555.0
[2025-11-20 01:28:16] 2025-11-20 06:27:30,964 | INFO     | sum of deviations: 274231855498.49997
[2025-11-20 01:28:16] 2025-11-20 06:27:30,964 | INFO     | mean x: 1763603571.5
[2025-11-20 01:28:16] 2025-11-20 06:27:30,964 | INFO     | mean y: 2884664.2055555554
[2025-11-20 01:28:16] 2025-11-20 06:27:30,964 | INFO     | intersect: -9902256236.072954
[2025-11-20 01:28:16] 2025-11-20 06:27:30,965 | INFO     | chi2: 2.1832157763358886
[2025-11-20 01:28:16] 2025-11-20 06:27:30,965 | INFO     | current chi2=2.1832157763358886 (change=42.45326864581767 %)
[2025-11-20 01:28:16] 2025-11-20 06:27:30,966 | INFO     | sum of square deviations: 47483011220.0
[2025-11-20 01:28:16] 2025-11-20 06:27:30,973 | INFO     | sum of deviations: 251732969329.0
[2025-11-20 01:28:16] 2025-11-20 06:27:30,973 | INFO     | mean x: 1763603724.0
[2025-11-20 01:28:16] 2025-11-20 06:27:30,973 | INFO     | mean y: 2887215.0990654207
[2025-11-20 01:28:16] 2025-11-20 06:27:30,973 | INFO     | intersect: -9346924238.627903
[2025-11-20 01:28:16] 2025-11-20 06:27:30,974 | INFO     | chi2: 2.164741349205069
[2025-11-20 01:28:16] 2025-11-20 06:27:30,974 | INFO     | current chi2=2.164741349205069 (change=0.8462025298216417 %)
[2025-11-20 01:28:16] 2025-11-20 06:27:30,974 | INFO     | left removable region: 20
[2025-11-20 01:28:16] 2025-11-20 06:27:30,975 | INFO     | sum of square deviations: 42108147652.5
[2025-11-20 01:28:16] 2025-11-20 06:27:30,982 | INFO     | sum of deviations: 359637443586.5004
[2025-11-20 01:28:16] 2025-11-20 06:27:30,982 | INFO     | mean x: 1763603693.5
[2025-11-20 01:28:16] 2025-11-20 06:27:30,982 | INFO     | mean y: 2906596.0408560312
[2025-11-20 01:28:16] 2025-11-20 06:27:30,982 | INFO     | intersect: -15059687205.62198
[2025-11-20 01:28:16] 2025-11-20 06:27:30,983 | INFO     | chi2: 0.04399021808105947
[2025-11-20 01:28:16] 2025-11-20 06:27:30,983 | INFO     | current memory leak: 8.54 B/s (using 514 data points, chi2=0.04)
[2025-11-20 01:28:16] 2025-11-20 06:27:30,983 | INFO     | could have reported an average CPU frequency of 2858 MHz (22 samples)
[2025-11-20 01:28:16] 2025-11-20 06:27:30,983 | INFO     | ..............................
[2025-11-20 01:28:16] 2025-11-20 06:27:30,984 | INFO     | . Timing measurements:
[2025-11-20 01:28:16] 2025-11-20 06:27:30,984 | INFO     | . get job = 0 s
[2025-11-20 01:28:16] 2025-11-20 06:27:30,984 | INFO     | . initial setup = 2 s
[2025-11-20 01:28:16] 2025-11-20 06:27:30,984 | INFO     | . payload setup = 5 s
[2025-11-20 01:28:16] 2025-11-20 06:27:30,984 | INFO     | . stage-in = 0 s
[2025-11-20 01:28:16] 2025-11-20 06:27:30,984 | INFO     | . payload execution = 33212 s
[2025-11-20 01:28:16] 2025-11-20 06:27:30,984 | INFO     | . stage-out = 3 s
[2025-11-20 01:28:16] 2025-11-20 06:27:30,984 | INFO     | . log creation = 0 s
[2025-11-20 01:28:16] 2025-11-20 06:27:30,985 | INFO     | ..............................
[2025-11-20 01:28:16] 2025-11-20 06:27:31,061 | INFO     | 
[2025-11-20 01:28:16] 2025-11-20 06:27:31,061 | INFO     | job summary report
[2025-11-20 01:28:16] 2025-11-20 06:27:31,062 | INFO     | --------------------------------------------------
[2025-11-20 01:28:16] 2025-11-20 06:27:31,062 | INFO     | PanDA job id: 6891587814
[2025-11-20 01:28:16] 2025-11-20 06:27:31,062 | INFO     | task id: 47493068
[2025-11-20 01:28:16] 2025-11-20 06:27:31,062 | INFO     | errors: (none)
[2025-11-20 01:28:16] 2025-11-20 06:27:31,062 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 01:28:16] 2025-11-20 06:27:31,062 | INFO     | pilot state: finished 
[2025-11-20 01:28:16] 2025-11-20 06:27:31,062 | INFO     | transexitcode: 0
[2025-11-20 01:28:16] 2025-11-20 06:27:31,062 | INFO     | exeerrorcode: 0
[2025-11-20 01:28:16] 2025-11-20 06:27:31,062 | INFO     | exeerrordiag: 
[2025-11-20 01:28:16] 2025-11-20 06:27:31,062 | INFO     | exitcode: 0
[2025-11-20 01:28:16] 2025-11-20 06:27:31,062 | INFO     | exitmsg: OK
[2025-11-20 01:28:16] 2025-11-20 06:27:31,062 | INFO     | cpuconsumptiontime: 262527 s
[2025-11-20 01:28:16] 2025-11-20 06:27:31,062 | INFO     | nevents: 1000
[2025-11-20 01:28:16] 2025-11-20 06:27:31,063 | INFO     | neventsw: 0
[2025-11-20 01:28:16] 2025-11-20 06:27:31,063 | INFO     | pid: 10619
[2025-11-20 01:28:16] 2025-11-20 06:27:31,063 | INFO     | pgrp: 10619
[2025-11-20 01:28:16] 2025-11-20 06:27:31,063 | INFO     | corecount: 8
[2025-11-20 01:28:16] 2025-11-20 06:27:31,063 | INFO     | event service: False
[2025-11-20 01:28:16] 2025-11-20 06:27:31,063 | INFO     | sizes: {0: 2297200, 3: 2297462, 11: 2297490, 33221: 2338233, 33226: 2347227, 33229: 2347283, 33232: 2347657}
[2025-11-20 01:28:16] 2025-11-20 06:27:31,063 | INFO     | --------------------------------------------------
[2025-11-20 01:28:16] 2025-11-20 06:27:31,063 | INFO     | 
[2025-11-20 01:28:16] 2025-11-20 06:27:31,063 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-20 01:28:16] 2025-11-20 06:27:31,082 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 01:28:16] 2025-11-20 06:27:31,082 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 01:28:16] 2025-11-20 06:27:31,083 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 01:28:16] 2025-11-20 06:27:31,083 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 01:28:16] 2025-11-20 06:27:31,083 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 01:28:16] 2025-11-20 06:27:31,083 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 01:28:16] 2025-11-20 06:27:31,083 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 01:28:16] 2025-11-20 06:27:31,083 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 01:28:16] 2025-11-20 06:27:31,083 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 01:28:16] 2025-11-20 06:27:31,083 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 01:28:16] 2025-11-20 06:27:31,083 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 01:28:16] 2025-11-20 06:27:31,083 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 01:28:16] 2025-11-20 06:27:31,083 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 01:28:16] 2025-11-20 06:27:31,083 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 01:28:16] 2025-11-20 06:27:31,084 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 01:28:16] 2025-11-20 06:27:31,084 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 01:28:16] 2025-11-20 06:27:31,084 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 01:28:16] 2025-11-20 06:27:31,084 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 01:28:16] 2025-11-20 06:27:31,084 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 01:28:16] 2025-11-20 06:27:31,084 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 01:28:16] 2025-11-20 06:27:31,084 | INFO     | job 6891587814 has completed (purged errors)
[2025-11-20 01:28:16] 2025-11-20 06:27:31,084 | INFO     | overall cleanup function is called
[2025-11-20 01:28:16] 2025-11-20 06:27:32,096 | INFO     | --- collectZombieJob: --- 10, [10619]
[2025-11-20 01:28:16] 2025-11-20 06:27:32,097 | INFO     | zombie collector waiting for pid 10619
[2025-11-20 01:28:16] 2025-11-20 06:27:32,097 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 01:28:16] 2025-11-20 06:27:32,097 | INFO     | collected zombie processes
[2025-11-20 01:28:16] 2025-11-20 06:27:32,097 | INFO     | will attempt to kill all subprocesses of pid=10619
[2025-11-20 01:28:16] 2025-11-20 06:27:32,306 | INFO     | process IDs to be killed: [10619] (in reverse order)
[2025-11-20 01:28:16] 2025-11-20 06:27:32,391 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 01:28:16] 2025-11-20 06:27:32,392 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 01:28:16] 2025-11-20 06:27:32,402 | INFO     | did not find any defunct processes belonging to 10619
[2025-11-20 01:28:16] 2025-11-20 06:27:32,410 | INFO     | did not find any defunct processes belonging to 10619
[2025-11-20 01:28:16] 2025-11-20 06:27:32,412 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 01:28:16] 2025-11-20 06:27:32,412 | INFO     | ready for new job
[2025-11-20 01:28:16] 2025-11-20 06:27:32,413 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 01:28:16] 2025-11-20 06:27:32,416 | INFO     | ***************************************
[2025-11-20 01:28:16] 2025-11-20 06:27:32,416 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 01:28:16] 2025-11-20 06:27:32,416 | INFO     | ***************************************
[2025-11-20 01:28:16] 2025-11-20 06:27:32,416 | INFO     | 
[2025-11-20 01:28:16] 2025-11-20 06:27:32,418 | INFO     | architecture information:
[2025-11-20 01:28:16] 2025-11-20 06:27:32,419 | INFO     | executing command: cat /etc/os-release
[2025-11-20 01:28:16] 2025-11-20 06:27:32,433 | INFO     | cat /etc/os-release:
[2025-11-20 01:28:16] NAME="CentOS Linux"
[2025-11-20 01:28:16] VERSION="7 (Core)"
[2025-11-20 01:28:16] ID="centos"
[2025-11-20 01:28:16] ID_LIKE="rhel fedora"
[2025-11-20 01:28:16] VERSION_ID="7"
[2025-11-20 01:28:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 01:28:16] ANSI_COLOR="0;31"
[2025-11-20 01:28:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 01:28:16] HOME_URL="https://www.centos.org/"
[2025-11-20 01:28:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 01:28:16] 
[2025-11-20 01:28:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 01:28:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 01:28:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 01:28:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 01:28:16] 
[2025-11-20 01:28:16] 2025-11-20 06:27:32,434 | INFO     | ***************************************
[2025-11-20 01:28:16] 2025-11-20 06:27:32,936 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-20 01:28:16] 2025-11-20 06:27:32,944 | INFO     | sufficient remaining disk space (105481502720 B)
[2025-11-20 01:28:16] 2025-11-20 06:27:32,945 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 01:28:16] 2025-11-20 06:27:32,945 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 01:28:16] 2025-11-20 06:27:32,945 | INFO     | update_server=False
[2025-11-20 01:28:16] 2025-11-20 06:27:32,945 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 01:28:16] 2025-11-20 06:27:32,945 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 01:28:16] 2025-11-20 06:27:32,945 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 01:28:16] 2025-11-20 06:27:33,029 | INFO     | all job control threads have been joined
[2025-11-20 01:28:16] 2025-11-20 06:27:33,252 | INFO     | all data control threads have been joined
[2025-11-20 01:28:16] 2025-11-20 06:27:33,445 | INFO     | all payload control threads have been joined
[2025-11-20 01:28:16] 2025-11-20 06:27:33,725 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 01:28:16] 2025-11-20 06:27:33,872 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 01:28:16] 2025-11-20 06:27:33,872 | INFO     | aborting loop
[2025-11-20 01:28:16] 2025-11-20 06:27:33,947 | INFO     | [job] retrieve thread has finished
[2025-11-20 01:28:16] 2025-11-20 06:27:33,950 | INFO     | [job] queue monitor thread has finished
[2025-11-20 01:28:16] 2025-11-20 06:27:34,031 | INFO     | [job] control thread has finished
[2025-11-20 01:28:16] 2025-11-20 06:27:34,090 | INFO     | [data] copytool_in thread has finished
[2025-11-20 01:28:16] 2025-11-20 06:27:34,257 | INFO     | [data] control thread has finished
[2025-11-20 01:28:16] 2025-11-20 06:27:34,281 | INFO     | [payload] validate_post thread has finished
[2025-11-20 01:28:16] 2025-11-20 06:27:34,451 | INFO     | [payload] control thread has finished
[2025-11-20 01:28:16] 2025-11-20 06:27:34,767 | INFO     | [job] validate thread has finished
[2025-11-20 01:28:16] 2025-11-20 06:27:34,877 | INFO     | [job] job monitor thread has finished
[2025-11-20 01:28:16] 2025-11-20 06:27:34,879 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 01:28:16] 2025-11-20 06:27:34,950 | INFO     | [data] copytool_out thread has finished
[2025-11-20 01:28:16] 2025-11-20 06:27:35,058 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 01:28:16] 2025-11-20 06:27:35,133 | INFO     | [payload] failed_post thread has finished
[2025-11-20 01:28:16] 2025-11-20 06:27:35,246 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 01:28:16] 2025-11-20 06:27:37,729 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 01:28:16] 2025-11-20 06:27:43,355 | INFO     | job.realtimelogging is not enabled
[2025-11-20 01:28:16] 2025-11-20 06:27:44,361 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 01:28:16] 2025-11-20 06:28:03,487 | INFO     | PID=1048 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-20 01:28:16] 2025-11-20 06:28:03,487 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 01:28:16] 2025-11-20 06:28:03,487 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 01:28:16] 2025-11-20 06:28:03,488 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 01:28:16] 2025-11-20 06:28:09,835 | INFO     | [monitor] cgroup control has ended
[2025-11-20 01:28:16] 2025-11-20 06:28:11,447 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140526610634560)>', '<ExcThread(monitor, started 140526321903360)>']
[2025-11-20 01:28:16] 2025-11-20 06:28:11,528 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 01:28:16] 2025-11-20 06:28:11,528 | INFO     | [monitor] control thread has ended
[2025-11-20 01:28:16] 2025-11-20 06:28:16,472 | INFO     | all workflow threads have been joined
[2025-11-20 01:28:16] 2025-11-20 06:28:16,473 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 01:28:16] 2025-11-20 06:28:16,473 | INFO     | traces error code: 0
[2025-11-20 01:28:16] 2025-11-20 06:28:16,474 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 01:28:16] 2025-11-20 06:28:16,589 [wrapper] ==== pilot stdout END ====
[2025-11-20 01:28:16] 2025-11-20 06:28:16,593 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 01:28:16] 2025-11-20 06:28:16,596 [wrapper] pilotpid: 1048
[2025-11-20 01:28:16] 2025-11-20 06:28:16,598 [wrapper] Pilot exit status: 0
[2025-11-20 01:28:16] 2025-11-20 06:28:16,609 [wrapper] pandaids: 6891587814
[2025-11-20 01:28:16] 2025-11-20 06:28:16,673 [wrapper] cleanup supervisor_pilot 12147 1049
[2025-11-20 01:28:16] 2025-11-20 06:28:16,678 [wrapper] Test setup, not cleaning
[2025-11-20 01:28:16] 2025-11-20 06:28:16,682 [wrapper] apfmon messages muted
[2025-11-20 01:28:16] 2025-11-20 06:28:16,686 [wrapper] ==== wrapper stdout END ====
[2025-11-20 01:28:16] 2025-11-20 06:28:16,689 [wrapper] ==== wrapper stderr END ====
[2025-11-20 01:28:16]  *** Error codes and diagnostics ***
[2025-11-20 01:28:16]     "exeErrorCode": 0,
[2025-11-20 01:28:16]     "exeErrorDiag": "",
[2025-11-20 01:28:16]     "pilotErrorCode": 0,
[2025-11-20 01:28:16]     "pilotErrorDiag": "",
[2025-11-20 01:28:16]  *** Listing of results directory ***
[2025-11-20 01:28:16] total 1299524
[2025-11-20 01:28:16] -rw-r--r-- 1 boincer umatlas    576529 Nov 18 12:24 pilot3.tar.gz
[2025-11-20 01:28:16] -rw-r--r-- 1 boincer umatlas      5112 Nov 18 12:35 queuedata.json
[2025-11-20 01:28:16] -rwx------ 1 boincer umatlas     36292 Nov 18 12:36 runpilot2-wrapper.sh
[2025-11-20 01:28:16] -rw-r--r-- 1 boincer umatlas       100 Nov 19 16:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 01:28:16] -rwxr-xr-x 1 boincer umatlas      7986 Nov 19 16:13 run_atlas
[2025-11-20 01:28:16] -rw-r--r-- 1 boincer umatlas       105 Nov 19 16:13 job.xml
[2025-11-20 01:28:16] -rw-r--r-- 2 boincer umatlas 410370459 Nov 19 16:13 EVNT.47493065._000505.pool.root.1
[2025-11-20 01:28:16] -rw-r--r-- 2 boincer umatlas     15120 Nov 19 16:13 start_atlas.sh
[2025-11-20 01:28:16] drwxrwx--x 2 boincer umatlas      4096 Nov 19 16:13 shared
[2025-11-20 01:28:16] -rw-r--r-- 2 boincer umatlas    590097 Nov 19 16:13 input.tar.gz
[2025-11-20 01:28:16] -rw-r--r-- 1 boincer umatlas         0 Nov 19 16:13 boinc_lockfile
[2025-11-20 01:28:16] -rw-r--r-- 1 boincer umatlas      2773 Nov 19 16:13 pandaJob.out
[2025-11-20 01:28:16] -rw------- 1 boincer umatlas    989443 Nov 19 16:13 agis_schedconf.cvmfs.json
[2025-11-20 01:28:16] drwx------ 5 boincer umatlas      4096 Nov 19 16:13 pilot3
[2025-11-20 01:28:16] -rw-r--r-- 1 boincer umatlas       533 Nov 20 01:20 boinc_task_state.xml
[2025-11-20 01:28:16] -rw-r--r-- 1 boincer umatlas      6038 Nov 20 01:22 init_data.xml
[2025-11-20 01:28:16] -rw------- 1 boincer umatlas 903564408 Nov 20 01:26 HITS.47493068._005044.pool.root.1
[2025-11-20 01:28:16] -rw------- 1 boincer umatlas      1060 Nov 20 01:27 memory_monitor_summary.json
[2025-11-20 01:28:16] -rw------- 1 boincer umatlas   1525063 Nov 20 01:27 agis_ddmendpoints.agis.ALL.json
[2025-11-20 01:28:16] -rw------- 1 boincer umatlas   1827622 Nov 20 01:27 log.47493068._005044.job.log.tgz.1
[2025-11-20 01:28:16] -rw------- 1 boincer umatlas      8663 Nov 20 01:27 heartbeat.json
[2025-11-20 01:28:16] -rw-r--r-- 1 boincer umatlas      8192 Nov 20 01:27 boinc_mmap_file
[2025-11-20 01:28:16] -rw-r--r-- 1 boincer umatlas        29 Nov 20 01:27 wrapper_checkpoint.txt
[2025-11-20 01:28:16] -rw------- 1 boincer umatlas        95 Nov 20 01:28 pilot_heartbeat.json
[2025-11-20 01:28:16] -rw------- 1 boincer umatlas      4818 Nov 20 01:28 pilotlog.txt
[2025-11-20 01:28:16] -rw------- 1 boincer umatlas   4599305 Nov 20 01:28 log.47493068._005044.job.log.1
[2025-11-20 01:28:16] -rw------- 1 boincer umatlas       353 Nov 20 01:28 output.list
[2025-11-20 01:28:16] -rw-r--r-- 1 boincer umatlas       620 Nov 20 01:28 runtime_log
[2025-11-20 01:28:16] -rw------- 1 boincer umatlas   6451200 Nov 20 01:28 result.tar.gz
[2025-11-20 01:28:16] -rw-r--r-- 1 boincer umatlas      8694 Nov 20 01:28 runtime_log.err
[2025-11-20 01:28:16] -rw------- 1 boincer umatlas       665 Nov 20 01:28 pvdKDm8nef8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm15FKDmGUdiJo.diag
[2025-11-20 01:28:16] -rw-r--r-- 1 boincer umatlas     21225 Nov 20 01:28 stderr.txt
[2025-11-20 01:28:16] HITS file was successfully produced:
[2025-11-20 01:28:16] -rw------- 1 boincer umatlas 903564408 Nov 20 01:26 shared/HITS.pool.root.1
[2025-11-20 01:28:16]  *** Contents of shared directory: ***
[2025-11-20 01:28:16] total 1290044
[2025-11-20 01:28:16] -rw-r--r-- 2 boincer umatlas 410370459 Nov 19 16:13 ATLAS.root_0
[2025-11-20 01:28:16] -rw-r--r-- 2 boincer umatlas     15120 Nov 19 16:13 start_atlas.sh
[2025-11-20 01:28:16] -rw-r--r-- 2 boincer umatlas    590097 Nov 19 16:13 input.tar.gz
[2025-11-20 01:28:16] -rw------- 1 boincer umatlas 903564408 Nov 20 01:26 HITS.pool.root.1
[2025-11-20 01:28:16] -rw------- 1 boincer umatlas   6451200 Nov 20 01:28 result.tar.gz
01:28:18 (46003): run_atlas exited; CPU time 254791.999449
01:28:18 (46003): called boinc_finish(0)

</stderr_txt>
]]>

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