Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:12:13 (2439): wrapper (7.7.26015): starting
01:12:13 (2439): wrapper: running run_atlas (--nthreads 8)
[2025-11-23 01:12:13] Arguments: --nthreads 8
[2025-11-23 01:12:13] Threads: 8
[2025-11-23 01:12:13] Checking for CVMFS
[2025-11-23 01:12:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 01:12:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 01:12:14] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 01:12:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 01:12:14] 2.11.2.0 17769 280134 141876 153190 3 188 15383779 25165825 4068 130560 2 132294209 99.882 78978894 2914 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-23 01:12:14] CVMFS is ok
[2025-11-23 01:12:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 01:12:14] Checking for apptainer binary...
[2025-11-23 01:12:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 01:12:14] Running /usr/bin/apptainer --version
[2025-11-23 01:12:15] apptainer version 1.3.2-1.el7
[2025-11-23 01:12:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 01:12:16] cg-vwn290.simple-grid.lan
[2025-11-23 01:12:16] apptainer works
[2025-11-23 01:12:16] Set ATHENA_PROC_NUMBER=8
[2025-11-23 01:12:16] Set ATHENA_CORE_NUMBER=8
[2025-11-23 01:12:16] Starting ATLAS job with PandaID=6891070603
[2025-11-23 01:12:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 02:56:49]  *** The last 200 lines of the pilot log: ***
[2025-11-24 02:56:49] 2025-11-24 01:55:26,674 | INFO     | monitor loop #6150: job 0:6891070603 is in state 'finished'
[2025-11-24 02:56:49] 2025-11-24 01:55:26,674 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 02:56:49] 2025-11-24 01:55:28,152 | INFO     | time since job start (92550s) is within the limit (172800.0s)
[2025-11-24 02:56:49] 2025-11-24 01:55:29,179 | INFO     | monitor loop #6151: job 0:6891070603 is in state 'finished'
[2025-11-24 02:56:49] 2025-11-24 01:55:29,179 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 02:56:49] 2025-11-24 01:55:30,160 | INFO     | time since job start (92552s) is within the limit (172800.0s)
[2025-11-24 02:56:49] 2025-11-24 01:55:31,685 | INFO     | monitor loop #6152: job 0:6891070603 is in state 'finished'
[2025-11-24 02:56:49] 2025-11-24 01:55:31,685 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 02:56:49] 2025-11-24 01:55:32,170 | INFO     | time since job start (92554s) is within the limit (172800.0s)
[2025-11-24 02:56:49] 2025-11-24 01:55:34,176 | INFO     | time since job start (92556s) is within the limit (172800.0s)
[2025-11-24 02:56:49] 2025-11-24 01:55:34,191 | INFO     | monitor loop #6153: job 0:6891070603 is in state 'finished'
[2025-11-24 02:56:49] 2025-11-24 01:55:34,191 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 02:56:49] 2025-11-24 01:55:36,182 | INFO     | time since job start (92558s) is within the limit (172800.0s)
[2025-11-24 02:56:49] 2025-11-24 01:55:36,333 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 02:56:49] 2025-11-24 01:55:36,334 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-24 02:56:49] 2025-11-24 01:55:36,336 | INFO     | using path: /var/lib/boinc/slots/11/PanDA_Pilot-6891070603/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 02:56:49] 2025-11-24 01:55:36,337 | INFO     | extracted standard info from prmon json
[2025-11-24 02:56:49] 2025-11-24 01:55:36,337 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 02:56:49] 2025-11-24 01:55:36,337 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 02:56:49] 2025-11-24 01:55:36,365 | INFO     | fitting pss+swap vs Time
[2025-11-24 02:56:49] 2025-11-24 01:55:36,368 | INFO     | sum of square deviations: 1073976048321.2467
[2025-11-24 02:56:49] 2025-11-24 01:55:36,439 | INFO     | sum of deviations: 3488304545371.363
[2025-11-24 02:56:49] 2025-11-24 01:55:36,440 | INFO     | mean x: 1763903083.1579642
[2025-11-24 02:56:49] 2025-11-24 01:55:36,440 | INFO     | mean y: 2842253.077990747
[2025-11-24 02:56:49] 2025-11-24 01:55:36,440 | INFO     | intersect: -5726364792.267586
[2025-11-24 02:56:49] 2025-11-24 01:55:36,442 | INFO     | chi2: 23.865260262930935
[2025-11-24 02:56:49] 2025-11-24 01:55:36,445 | INFO     | sum of square deviations: 1063364234859.5195
[2025-11-24 02:56:49] 2025-11-24 01:55:36,510 | INFO     | sum of deviations: 3976456623092.7085
[2025-11-24 02:56:49] 2025-11-24 01:55:36,510 | INFO     | mean x: 1763902930.6618037
[2025-11-24 02:56:49] 2025-11-24 01:55:36,510 | INFO     | mean y: 2849266.9151193635
[2025-11-24 02:56:49] 2025-11-24 01:55:36,511 | INFO     | intersect: -6593275805.929177
[2025-11-24 02:56:49] 2025-11-24 01:55:36,513 | INFO     | chi2: 20.788804447983974
[2025-11-24 02:56:49] 2025-11-24 01:55:36,513 | INFO     | current chi2=20.788804447983974 (change=12.89093762671221 %)
[2025-11-24 02:56:49] 2025-11-24 01:55:36,513 | INFO     | right removable region: 1507
[2025-11-24 02:56:49] 2025-11-24 01:55:36,515 | INFO     | sum of square deviations: 1063363166139.5199
[2025-11-24 02:56:49] 2025-11-24 01:55:36,576 | INFO     | sum of deviations: 2858432927117.477
[2025-11-24 02:56:49] 2025-11-24 01:55:36,576 | INFO     | mean x: 1763903235.6618037
[2025-11-24 02:56:49] 2025-11-24 01:55:36,576 | INFO     | mean y: 2851303.6107427054
[2025-11-24 02:56:49] 2025-11-24 01:55:36,576 | INFO     | intersect: -4738707600.831521
[2025-11-24 02:56:49] 2025-11-24 01:55:36,578 | INFO     | chi2: 19.252668373584076
[2025-11-24 02:56:49] 2025-11-24 01:55:36,579 | INFO     | current chi2=19.252668373584076 (change=19.32764125984176 %)
[2025-11-24 02:56:49] 2025-11-24 01:55:36,579 | INFO     | left removable region: 10
[2025-11-24 02:56:49] 2025-11-24 01:55:36,581 | INFO     | sum of square deviations: 1040262676147.562
[2025-11-24 02:56:49] 2025-11-24 01:55:36,650 | INFO     | sum of deviations: 2899112817272.2383
[2025-11-24 02:56:49] 2025-11-24 01:55:36,650 | INFO     | mean x: 1763903205.1703408
[2025-11-24 02:56:49] 2025-11-24 01:55:36,650 | INFO     | mean y: 2867924.8343353374
[2025-11-24 02:56:49] 2025-11-24 01:55:36,650 | INFO     | intersect: -4912961997.54147
[2025-11-24 02:56:49] 2025-11-24 01:55:36,652 | INFO     | chi2: 12.007324704344475
[2025-11-24 02:56:49] 2025-11-24 01:55:36,653 | INFO     | current memory leak: 2.79 B/s (using 1497 data points, chi2=12.01)
[2025-11-24 02:56:49] 2025-11-24 01:55:36,655 | INFO     | could have reported an average CPU frequency of 1999 MHz (51 samples)
[2025-11-24 02:56:49] 2025-11-24 01:55:36,656 | INFO     | ..............................
[2025-11-24 02:56:49] 2025-11-24 01:55:36,656 | INFO     | . Timing measurements:
[2025-11-24 02:56:49] 2025-11-24 01:55:36,656 | INFO     | . get job = 0 s
[2025-11-24 02:56:49] 2025-11-24 01:55:36,656 | INFO     | . initial setup = 2 s
[2025-11-24 02:56:49] 2025-11-24 01:55:36,656 | INFO     | . payload setup = 18 s
[2025-11-24 02:56:49] 2025-11-24 01:55:36,656 | INFO     | . stage-in = 0 s
[2025-11-24 02:56:49] 2025-11-24 01:55:36,656 | INFO     | . payload execution = 92387 s
[2025-11-24 02:56:49] 2025-11-24 01:55:36,656 | INFO     | . stage-out = 5 s
[2025-11-24 02:56:49] 2025-11-24 01:55:36,657 | INFO     | . log creation = 2 s
[2025-11-24 02:56:49] 2025-11-24 01:55:36,657 | INFO     | ..............................
[2025-11-24 02:56:49] 2025-11-24 01:55:37,111 | INFO     | 
[2025-11-24 02:56:49] 2025-11-24 01:55:37,111 | INFO     | job summary report
[2025-11-24 02:56:49] 2025-11-24 01:55:37,112 | INFO     | --------------------------------------------------
[2025-11-24 02:56:49] 2025-11-24 01:55:37,112 | INFO     | PanDA job id: 6891070603
[2025-11-24 02:56:49] 2025-11-24 01:55:37,112 | INFO     | task id: 47483661
[2025-11-24 02:56:49] 2025-11-24 01:55:37,112 | INFO     | errors: (none)
[2025-11-24 02:56:49] 2025-11-24 01:55:37,112 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 02:56:49] 2025-11-24 01:55:37,112 | INFO     | pilot state: finished 
[2025-11-24 02:56:49] 2025-11-24 01:55:37,112 | INFO     | transexitcode: 0
[2025-11-24 02:56:49] 2025-11-24 01:55:37,112 | INFO     | exeerrorcode: 0
[2025-11-24 02:56:49] 2025-11-24 01:55:37,112 | INFO     | exeerrordiag: 
[2025-11-24 02:56:49] 2025-11-24 01:55:37,112 | INFO     | exitcode: 0
[2025-11-24 02:56:49] 2025-11-24 01:55:37,112 | INFO     | exitmsg: OK
[2025-11-24 02:56:49] 2025-11-24 01:55:37,113 | INFO     | cpuconsumptiontime: 342063 s
[2025-11-24 02:56:49] 2025-11-24 01:55:37,113 | INFO     | nevents: 1000
[2025-11-24 02:56:49] 2025-11-24 01:55:37,113 | INFO     | neventsw: 0
[2025-11-24 02:56:49] 2025-11-24 01:55:37,113 | INFO     | pid: 23781
[2025-11-24 02:56:49] 2025-11-24 01:55:37,113 | INFO     | pgrp: 23781
[2025-11-24 02:56:49] 2025-11-24 01:55:37,113 | INFO     | corecount: 8
[2025-11-24 02:56:49] 2025-11-24 01:55:37,113 | INFO     | event service: False
[2025-11-24 02:56:49] 2025-11-24 01:55:37,113 | INFO     | sizes: {0: 2298797, 1: 2298797, 12: 2298825, 14: 2299115, 22: 2299143, 92410: 2363557, 92416: 2372581, 92417: 2372637, 92519: 2372883}
[2025-11-24 02:56:49] 2025-11-24 01:55:37,113 | INFO     | --------------------------------------------------
[2025-11-24 02:56:49] 2025-11-24 01:55:37,113 | INFO     | 
[2025-11-24 02:56:49] 2025-11-24 01:55:37,114 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-11-24 02:56:49] 2025-11-24 01:55:37,436 | INFO     | PID=8818 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-24 02:56:49] 2025-11-24 01:55:37,436 | INFO     | .. there are 9 such processes running
[2025-11-24 02:56:49] 2025-11-24 01:55:37,868 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 02:56:49] 2025-11-24 01:55:37,868 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 02:56:49] 2025-11-24 01:55:37,868 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 02:56:49] 2025-11-24 01:55:37,868 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 02:56:49] 2025-11-24 01:55:37,868 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 02:56:49] 2025-11-24 01:55:37,868 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 02:56:49] 2025-11-24 01:55:37,868 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 02:56:49] 2025-11-24 01:55:37,868 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 02:56:49] 2025-11-24 01:55:37,869 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 02:56:49] 2025-11-24 01:55:37,869 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 02:56:49] 2025-11-24 01:55:37,869 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 02:56:49] 2025-11-24 01:55:37,869 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 02:56:49] 2025-11-24 01:55:37,869 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 02:56:49] 2025-11-24 01:55:37,869 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 02:56:49] 2025-11-24 01:55:37,869 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 02:56:49] 2025-11-24 01:55:37,869 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 02:56:49] 2025-11-24 01:55:37,869 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 02:56:49] 2025-11-24 01:55:37,869 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 02:56:49] 2025-11-24 01:55:37,870 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 02:56:49] 2025-11-24 01:55:37,870 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 02:56:49] 2025-11-24 01:55:37,870 | INFO     | job 6891070603 has completed (purged errors)
[2025-11-24 02:56:49] 2025-11-24 01:55:37,870 | INFO     | overall cleanup function is called
[2025-11-24 02:56:49] 2025-11-24 01:55:38,888 | INFO     | --- collectZombieJob: --- 10, [23781]
[2025-11-24 02:56:49] 2025-11-24 01:55:38,888 | INFO     | zombie collector waiting for pid 23781
[2025-11-24 02:56:49] 2025-11-24 01:55:38,889 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 02:56:49] 2025-11-24 01:55:38,889 | INFO     | collected zombie processes
[2025-11-24 02:56:49] 2025-11-24 01:55:38,889 | INFO     | will attempt to kill all subprocesses of pid=23781
[2025-11-24 02:56:49] 2025-11-24 01:55:38,985 | INFO     | process IDs to be killed: [23781] (in reverse order)
[2025-11-24 02:56:49] 2025-11-24 01:55:39,933 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 02:56:49] 2025-11-24 01:55:39,933 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 02:56:49] 2025-11-24 01:55:39,936 | INFO     | did not find any defunct processes belonging to 23781
[2025-11-24 02:56:49] 2025-11-24 01:55:39,939 | INFO     | did not find any defunct processes belonging to 23781
[2025-11-24 02:56:49] 2025-11-24 01:55:39,995 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 02:56:49] 2025-11-24 01:55:39,996 | INFO     | ready for new job
[2025-11-24 02:56:49] 2025-11-24 01:55:39,996 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 02:56:49] 2025-11-24 01:55:40,003 | INFO     | ***************************************
[2025-11-24 02:56:49] 2025-11-24 01:55:40,003 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 02:56:49] 2025-11-24 01:55:40,003 | INFO     | ***************************************
[2025-11-24 02:56:49] 2025-11-24 01:55:40,004 | INFO     | 
[2025-11-24 02:56:49] 2025-11-24 01:55:40,004 | INFO     | pilot is running in a VM
[2025-11-24 02:56:49] 2025-11-24 01:55:40,004 | INFO     | architecture information:
[2025-11-24 02:56:49] 2025-11-24 01:55:40,013 | INFO     | executing command: cat /etc/os-release
[2025-11-24 02:56:49] 2025-11-24 01:55:40,199 | INFO     | cat /etc/os-release:
[2025-11-24 02:56:49] NAME="CentOS Linux"
[2025-11-24 02:56:49] VERSION="7 (Core)"
[2025-11-24 02:56:49] ID="centos"
[2025-11-24 02:56:49] ID_LIKE="rhel fedora"
[2025-11-24 02:56:49] VERSION_ID="7"
[2025-11-24 02:56:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 02:56:49] ANSI_COLOR="0;31"
[2025-11-24 02:56:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 02:56:49] HOME_URL="https://www.centos.org/"
[2025-11-24 02:56:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 02:56:49] 
[2025-11-24 02:56:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 02:56:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 02:56:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 02:56:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 02:56:49] 
[2025-11-24 02:56:49] 2025-11-24 01:55:40,200 | INFO     | ***************************************
[2025-11-24 02:56:49] 2025-11-24 01:55:40,703 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-11-24 02:56:49] 2025-11-24 01:55:40,858 | INFO     | sufficient remaining disk space (495037972480 B)
[2025-11-24 02:56:49] 2025-11-24 01:55:40,858 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 02:56:49] 2025-11-24 01:55:40,858 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 02:56:49] 2025-11-24 01:55:40,859 | INFO     | update_server=False
[2025-11-24 02:56:49] 2025-11-24 01:55:40,859 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 02:56:49] 2025-11-24 01:55:40,859 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 02:56:49] 2025-11-24 01:55:40,859 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 02:56:49] 2025-11-24 01:55:40,859 | INFO     | aborting loop
[2025-11-24 02:56:49] 2025-11-24 01:55:41,093 | INFO     | all data control threads have been joined
[2025-11-24 02:56:49] 2025-11-24 01:55:41,403 | INFO     | all job control threads have been joined
[2025-11-24 02:56:49] 2025-11-24 01:55:41,826 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 02:56:49] 2025-11-24 01:55:41,865 | INFO     | [job] retrieve thread has finished
[2025-11-24 02:56:49] 2025-11-24 01:55:41,866 | INFO     | [job] job monitor thread has finished
[2025-11-24 02:56:49] 2025-11-24 01:55:41,938 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 02:56:49] 2025-11-24 01:55:41,940 | INFO     | [payload] failed_post thread has finished
[2025-11-24 02:56:49] 2025-11-24 01:55:41,984 | INFO     | all payload control threads have been joined
[2025-11-24 02:56:49] 2025-11-24 01:55:42,099 | INFO     | [data] control thread has finished
[2025-11-24 02:56:49] 2025-11-24 01:55:42,183 | INFO     | [data] copytool_in thread has finished
[2025-11-24 02:56:49] 2025-11-24 01:55:42,342 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 02:56:49] 2025-11-24 01:55:42,408 | INFO     | [job] control thread has finished
[2025-11-24 02:56:49] 2025-11-24 01:55:42,832 | INFO     | [job] queue monitor thread has finished
[2025-11-24 02:56:49] 2025-11-24 01:55:42,844 | INFO     | [job] validate thread has finished
[2025-11-24 02:56:49] 2025-11-24 01:55:42,990 | INFO     | [payload] control thread has finished
[2025-11-24 02:56:49] 2025-11-24 01:55:43,129 | INFO     | [payload] validate_post thread has finished
[2025-11-24 02:56:49] 2025-11-24 01:55:43,201 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 02:56:49] 2025-11-24 01:55:43,220 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 02:56:49] 2025-11-24 01:55:43,945 | INFO     | [data] copytool_out thread has finished
[2025-11-24 02:56:49] 2025-11-24 01:55:44,868 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 02:56:49] 2025-11-24 01:55:51,765 | INFO     | job.realtimelogging is not enabled
[2025-11-24 02:56:49] 2025-11-24 01:55:52,771 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 02:56:49] 2025-11-24 01:56:09,604 | INFO     | PID=8818 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-24 02:56:49] 2025-11-24 01:56:09,604 | INFO     | .. there are 9 such processes running
[2025-11-24 02:56:49] 2025-11-24 01:56:09,604 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 02:56:49] 2025-11-24 01:56:09,604 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 02:56:49] 2025-11-24 01:56:09,605 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 02:56:49] 2025-11-24 01:56:39,762 | INFO     | [monitor] cgroup control has ended
[2025-11-24 02:56:49] 2025-11-24 01:56:40,769 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140369079998272)>', '<ExcThread(monitor, started 140368632858368)>']
[2025-11-24 02:56:49] 2025-11-24 01:56:40,788 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 02:56:49] 2025-11-24 01:56:40,788 | INFO     | [monitor] control thread has ended
[2025-11-24 02:56:49] 2025-11-24 01:56:45,795 | INFO     | all workflow threads have been joined
[2025-11-24 02:56:49] 2025-11-24 01:56:45,795 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 02:56:49] 2025-11-24 01:56:45,796 | INFO     | traces error code: 0
[2025-11-24 02:56:49] 2025-11-24 01:56:45,796 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 02:56:49] 2025-11-24 01:56:46,118 [wrapper] ==== pilot stdout END ====
[2025-11-24 02:56:49] 2025-11-24 01:56:46,210 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 02:56:49] 2025-11-24 01:56:46,336 [wrapper] pilotpid: 8818
[2025-11-24 02:56:49] 2025-11-24 01:56:46,419 [wrapper] Pilot exit status: 0
[2025-11-24 02:56:49] 2025-11-24 01:56:46,776 [wrapper] pandaids: 6891070603
[2025-11-24 02:56:49] 2025-11-24 01:56:47,722 [wrapper] cleanup supervisor_pilot 31287 8819
[2025-11-24 02:56:49] 2025-11-24 01:56:47,823 [wrapper] Test setup, not cleaning
[2025-11-24 02:56:49] 2025-11-24 01:56:47,900 [wrapper] apfmon messages muted
[2025-11-24 02:56:49] 2025-11-24 01:56:47,919 [wrapper] ==== wrapper stdout END ====
[2025-11-24 02:56:49] 2025-11-24 01:56:47,987 [wrapper] ==== wrapper stderr END ====
[2025-11-24 02:56:49]  *** Error codes and diagnostics ***
[2025-11-24 02:56:49]     "exeErrorCode": 0,
[2025-11-24 02:56:49]     "exeErrorDiag": "",
[2025-11-24 02:56:49]     "pilotErrorCode": 0,
[2025-11-24 02:56:49]     "pilotErrorDiag": "",
[2025-11-24 02:56:49]  *** Listing of results directory ***
[2025-11-24 02:56:49] total 1343960
[2025-11-24 02:56:49] -rw-r--r--. 1 boinc boinc    576529 Nov 18 06:55 pilot3.tar.gz
[2025-11-24 02:56:49] -rw-r--r--. 1 boinc boinc      5112 Nov 18 06:57 queuedata.json
[2025-11-24 02:56:49] -rwx------. 1 boinc boinc     36292 Nov 18 06:58 runpilot2-wrapper.sh
[2025-11-24 02:56:49] -rw-r--r--. 1 boinc boinc       100 Nov 23 01:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 02:56:49] -rwxr-xr-x. 1 boinc boinc      7986 Nov 23 01:12 run_atlas
[2025-11-24 02:56:49] -rw-r--r--. 1 boinc boinc       105 Nov 23 01:12 job.xml
[2025-11-24 02:56:49] -rw-r--r--. 2 boinc boinc 410277042 Nov 23 01:12 EVNT.47483658._000150.pool.root.1
[2025-11-24 02:56:49] -rw-r--r--. 1 boinc boinc      6392 Nov 23 01:12 init_data.xml
[2025-11-24 02:56:49] -rw-r--r--. 2 boinc boinc     15120 Nov 23 01:12 start_atlas.sh
[2025-11-24 02:56:49] drwxrwx--x. 2 boinc boinc        68 Nov 23 01:12 shared
[2025-11-24 02:56:49] -rw-r--r--. 2 boinc boinc    590092 Nov 23 01:12 input.tar.gz
[2025-11-24 02:56:49] -rw-r--r--. 1 boinc boinc         0 Nov 23 01:12 boinc_lockfile
[2025-11-24 02:56:49] -rw-r--r--. 1 boinc boinc      2773 Nov 23 01:12 pandaJob.out
[2025-11-24 02:56:49] -rw-------. 1 boinc boinc    989784 Nov 23 01:12 agis_schedconf.cvmfs.json
[2025-11-24 02:56:49] drwx------. 5 boinc boinc      4096 Nov 23 01:12 pilot3
[2025-11-24 02:56:49] -rw-r--r--. 1 boinc boinc       533 Nov 24 02:26 boinc_task_state.xml
[2025-11-24 02:56:49] -rw-------. 1 boinc boinc 932221453 Nov 24 02:52 HITS.47483661._001493.pool.root.1
[2025-11-24 02:56:49] -rw-------. 1 boinc boinc      1031 Nov 24 02:53 memory_monitor_summary.json
[2025-11-24 02:56:49] -rw-------. 1 boinc boinc   1526164 Nov 24 02:53 agis_ddmendpoints.agis.ALL.json
[2025-11-24 02:56:49] -rw-------. 1 boinc boinc   2569595 Nov 24 02:53 log.47483661._001493.job.log.tgz.1
[2025-11-24 02:56:49] -rw-------. 1 boinc boinc      8627 Nov 24 02:55 heartbeat.json
[2025-11-24 02:56:49] -rw-------. 1 boinc boinc        95 Nov 24 02:55 pilot_heartbeat.json
[2025-11-24 02:56:49] -rw-r--r--. 1 boinc boinc        29 Nov 24 02:56 wrapper_checkpoint.txt
[2025-11-24 02:56:49] -rw-r--r--. 1 boinc boinc      8192 Nov 24 02:56 boinc_mmap_file
[2025-11-24 02:56:49] -rw-------. 1 boinc boinc      4956 Nov 24 02:56 pilotlog.txt
[2025-11-24 02:56:49] -rw-------. 1 boinc boinc  12331476 Nov 24 02:56 log.47483661._001493.job.log.1
[2025-11-24 02:56:49] -rw-------. 1 boinc boinc       353 Nov 24 02:56 output.list
[2025-11-24 02:56:49] -rw-r--r--. 1 boinc boinc       620 Nov 24 02:56 runtime_log
[2025-11-24 02:56:49] -rw-------. 1 boinc boinc  14919680 Nov 24 02:56 result.tar.gz
[2025-11-24 02:56:49] -rw-r--r--. 1 boinc boinc      8717 Nov 24 02:56 runtime_log.err
[2025-11-24 02:56:49] -rw-------. 1 boinc boinc       662 Nov 24 02:56 8NXLDmFuTf8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmSHKODmR3a1Nm.diag
[2025-11-24 02:56:49] -rw-r--r--. 1 boinc boinc     21452 Nov 24 02:56 stderr.txt
[2025-11-24 02:56:49] HITS file was successfully produced:
[2025-11-24 02:56:50] -rw-------. 1 boinc boinc 932221453 Nov 24 02:52 shared/HITS.pool.root.1
[2025-11-24 02:56:50]  *** Contents of shared directory: ***
[2025-11-24 02:56:50] total 1326208
[2025-11-24 02:56:50] -rw-r--r--. 2 boinc boinc 410277042 Nov 23 01:12 ATLAS.root_0
[2025-11-24 02:56:50] -rw-r--r--. 2 boinc boinc     15120 Nov 23 01:12 start_atlas.sh
[2025-11-24 02:56:50] -rw-r--r--. 2 boinc boinc    590092 Nov 23 01:12 input.tar.gz
[2025-11-24 02:56:50] -rw-------. 1 boinc boinc 932221453 Nov 24 02:52 HITS.pool.root.1
[2025-11-24 02:56:50] -rw-------. 1 boinc boinc  14919680 Nov 24 02:56 result.tar.gz
02:56:51 (2439): run_atlas exited; CPU time 342689.343565
02:56:51 (2439): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN