Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:33:45 (10543): wrapper (7.7.26015): starting
23:33:45 (10543): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 23:33:45] Arguments: --nthreads 8
[2025-11-22 23:33:45] Threads: 8
[2025-11-22 23:33:45] Checking for CVMFS
[2025-11-22 23:33:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 23:33:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 23:33:46] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 23:33:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 23:33:48] 2.11.2.0 24942 78365 89780 153187 1 84 15542795 25165825 4632 130560 6 21834120 99.893 11644109 1889 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-22 23:33:48] CVMFS is ok
[2025-11-22 23:33:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 23:33:48] Checking for apptainer binary...
[2025-11-22 23:33:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 23:33:48] Running /usr/bin/apptainer --version
[2025-11-22 23:33:48] apptainer version 1.3.2-1.el7
[2025-11-22 23:33:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 23:34:06] cg-vwn352.simple-grid.lan
[2025-11-22 23:34:06] apptainer works
[2025-11-22 23:34:06] Set ATHENA_PROC_NUMBER=8
[2025-11-22 23:34:06] Set ATHENA_CORE_NUMBER=8
[2025-11-22 23:34:06] Starting ATLAS job with PandaID=6891571808
[2025-11-22 23:34:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 00:49:41]  *** The last 200 lines of the pilot log: ***
[2025-11-24 00:49:41] 2025-11-23 23:48:36,732 | INFO     | time since job start (90644s) is within the limit (172800.0s)
[2025-11-24 00:49:41] 2025-11-23 23:48:38,740 | INFO     | time since job start (90646s) is within the limit (172800.0s)
[2025-11-24 00:49:41] 2025-11-23 23:48:38,832 | INFO     | monitor loop #6099: job 0:6891571808 is in state 'finished'
[2025-11-24 00:49:41] 2025-11-23 23:48:38,832 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 00:49:41] 2025-11-23 23:48:40,753 | INFO     | time since job start (90648s) is within the limit (172800.0s)
[2025-11-24 00:49:41] 2025-11-23 23:48:41,340 | INFO     | monitor loop #6100: job 0:6891571808 is in state 'finished'
[2025-11-24 00:49:41] 2025-11-23 23:48:41,340 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 00:49:41] 2025-11-23 23:48:42,762 | INFO     | time since job start (90650s) is within the limit (172800.0s)
[2025-11-24 00:49:41] 2025-11-23 23:48:43,845 | INFO     | monitor loop #6101: job 0:6891571808 is in state 'finished'
[2025-11-24 00:49:41] 2025-11-23 23:48:43,845 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 00:49:41] 2025-11-23 23:48:44,774 | INFO     | time since job start (90652s) is within the limit (172800.0s)
[2025-11-24 00:49:41] 2025-11-23 23:48:46,355 | INFO     | monitor loop #6102: job 0:6891571808 is in state 'finished'
[2025-11-24 00:49:41] 2025-11-23 23:48:46,355 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 00:49:41] 2025-11-23 23:48:46,781 | INFO     | time since job start (90654s) is within the limit (172800.0s)
[2025-11-24 00:49:41] 2025-11-23 23:48:47,629 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 00:49:41] 2025-11-23 23:48:47,630 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-24 00:49:41] 2025-11-23 23:48:47,632 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6891571808/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 00:49:41] 2025-11-23 23:48:47,633 | INFO     | extracted standard info from prmon json
[2025-11-24 00:49:41] 2025-11-23 23:48:47,633 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 00:49:41] 2025-11-23 23:48:47,633 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 00:49:41] 2025-11-23 23:48:47,667 | INFO     | fitting pss+swap vs Time
[2025-11-24 00:49:41] 2025-11-23 23:48:47,670 | INFO     | sum of square deviations: 997095878801.3541
[2025-11-24 00:49:41] 2025-11-23 23:48:47,734 | INFO     | sum of deviations: 2831598624678.98
[2025-11-24 00:49:41] 2025-11-23 23:48:47,735 | INFO     | mean x: 1763896585.807588
[2025-11-24 00:49:41] 2025-11-23 23:48:47,735 | INFO     | mean y: 2849669.876693767
[2025-11-24 00:49:41] 2025-11-23 23:48:47,735 | INFO     | intersect: -5006344784.374752
[2025-11-24 00:49:41] 2025-11-23 23:48:47,737 | INFO     | chi2: 18.1111125391718
[2025-11-24 00:49:41] 2025-11-23 23:48:47,739 | INFO     | sum of square deviations: 986997654837.7773
[2025-11-24 00:49:41] 2025-11-23 23:48:47,802 | INFO     | sum of deviations: 3312231509912.9067
[2025-11-24 00:49:41] 2025-11-23 23:48:47,803 | INFO     | mean x: 1763896433.3120327
[2025-11-24 00:49:41] 2025-11-23 23:48:47,803 | INFO     | mean y: 2856927.050305914
[2025-11-24 00:49:41] 2025-11-23 23:48:47,803 | INFO     | intersect: -5916542494.0145445
[2025-11-24 00:49:41] 2025-11-23 23:48:47,805 | INFO     | chi2: 14.991653021500635
[2025-11-24 00:49:41] 2025-11-23 23:48:47,805 | INFO     | current chi2=14.991653021500635 (change=17.22400824866065 %)
[2025-11-24 00:49:41] 2025-11-23 23:48:47,805 | INFO     | right removable region: 1470
[2025-11-24 00:49:41] 2025-11-23 23:48:47,807 | INFO     | sum of square deviations: 986996477537.7777
[2025-11-24 00:49:41] 2025-11-23 23:48:47,920 | INFO     | sum of deviations: 2227619835968.123
[2025-11-24 00:49:41] 2025-11-23 23:48:47,920 | INFO     | mean x: 1763896738.3120327
[2025-11-24 00:49:41] 2025-11-23 23:48:47,920 | INFO     | mean y: 2858789.004078858
[2025-11-24 00:49:41] 2025-11-23 23:48:47,921 | INFO     | intersect: -3978200366.0048738
[2025-11-24 00:49:41] 2025-11-23 23:48:47,922 | INFO     | chi2: 13.753726489887494
[2025-11-24 00:49:41] 2025-11-23 23:48:47,923 | INFO     | current chi2=13.753726489887494 (change=24.059184878123247 %)
[2025-11-24 00:49:41] 2025-11-23 23:48:47,923 | INFO     | left removable region: 10
[2025-11-24 00:49:41] 2025-11-23 23:48:47,925 | INFO     | sum of square deviations: 965019896440.9833
[2025-11-24 00:49:41] 2025-11-23 23:48:48,039 | INFO     | sum of deviations: 2570895564238.409
[2025-11-24 00:49:41] 2025-11-23 23:48:48,040 | INFO     | mean x: 1763896707.820548
[2025-11-24 00:49:41] 2025-11-23 23:48:48,040 | INFO     | mean y: 2871461.432876712
[2025-11-24 00:49:41] 2025-11-23 23:48:48,040 | INFO     | intersect: -4696300274.440146
[2025-11-24 00:49:41] 2025-11-23 23:48:48,042 | INFO     | chi2: 9.078114331366411
[2025-11-24 00:49:41] 2025-11-23 23:48:48,042 | INFO     | current memory leak: 2.66 B/s (using 1460 data points, chi2=9.08)
[2025-11-24 00:49:41] 2025-11-23 23:48:48,044 | INFO     | could have reported an average CPU frequency of 1999 MHz (50 samples)
[2025-11-24 00:49:41] 2025-11-23 23:48:48,045 | INFO     | ..............................
[2025-11-24 00:49:41] 2025-11-23 23:48:48,045 | INFO     | . Timing measurements:
[2025-11-24 00:49:41] 2025-11-23 23:48:48,045 | INFO     | . get job = 0 s
[2025-11-24 00:49:41] 2025-11-23 23:48:48,045 | INFO     | . initial setup = 5 s
[2025-11-24 00:49:41] 2025-11-23 23:48:48,045 | INFO     | . payload setup = 162 s
[2025-11-24 00:49:41] 2025-11-23 23:48:48,045 | INFO     | . stage-in = 0 s
[2025-11-24 00:49:41] 2025-11-23 23:48:48,045 | INFO     | . payload execution = 90175 s
[2025-11-24 00:49:41] 2025-11-23 23:48:48,045 | INFO     | . stage-out = 6 s
[2025-11-24 00:49:41] 2025-11-23 23:48:48,046 | INFO     | . log creation = 2 s
[2025-11-24 00:49:41] 2025-11-23 23:48:48,046 | INFO     | ..............................
[2025-11-24 00:49:41] 2025-11-23 23:48:48,239 | INFO     | 
[2025-11-24 00:49:41] 2025-11-23 23:48:48,239 | INFO     | job summary report
[2025-11-24 00:49:41] 2025-11-23 23:48:48,239 | INFO     | --------------------------------------------------
[2025-11-24 00:49:41] 2025-11-23 23:48:48,239 | INFO     | PanDA job id: 6891571808
[2025-11-24 00:49:41] 2025-11-23 23:48:48,239 | INFO     | task id: 47493068
[2025-11-24 00:49:41] 2025-11-23 23:48:48,239 | INFO     | errors: (none)
[2025-11-24 00:49:41] 2025-11-23 23:48:48,239 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 00:49:41] 2025-11-23 23:48:48,239 | INFO     | pilot state: finished 
[2025-11-24 00:49:41] 2025-11-23 23:48:48,240 | INFO     | transexitcode: 0
[2025-11-24 00:49:41] 2025-11-23 23:48:48,240 | INFO     | exeerrorcode: 0
[2025-11-24 00:49:41] 2025-11-23 23:48:48,240 | INFO     | exeerrordiag: 
[2025-11-24 00:49:41] 2025-11-23 23:48:48,240 | INFO     | exitcode: 0
[2025-11-24 00:49:41] 2025-11-23 23:48:48,240 | INFO     | exitmsg: OK
[2025-11-24 00:49:41] 2025-11-23 23:48:48,240 | INFO     | cpuconsumptiontime: 335806 s
[2025-11-24 00:49:41] 2025-11-23 23:48:48,240 | INFO     | nevents: 1000
[2025-11-24 00:49:41] 2025-11-23 23:48:48,240 | INFO     | neventsw: 0
[2025-11-24 00:49:41] 2025-11-23 23:48:48,240 | INFO     | pid: 20905
[2025-11-24 00:49:41] 2025-11-23 23:48:48,240 | INFO     | pgrp: 20905
[2025-11-24 00:49:41] 2025-11-23 23:48:48,240 | INFO     | corecount: 8
[2025-11-24 00:49:41] 2025-11-23 23:48:48,240 | INFO     | event service: False
[2025-11-24 00:49:41] 2025-11-23 23:48:48,240 | INFO     | sizes: {0: 2297967, 1: 2298652, 2: 2298851, 13: 2298851, 23: 2298907, 34: 2298935, 45: 2299091, 56: 2299119, 66: 2299147, 77: 2299175, 88: 2299231, 99: 2299539, 10
[2025-11-24 00:49:41] 2025-11-23 23:48:48,241 | INFO     | --------------------------------------------------
[2025-11-24 00:49:41] 2025-11-23 23:48:48,241 | INFO     | 
[2025-11-24 00:49:41] 2025-11-23 23:48:48,241 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-11-24 00:49:41] 2025-11-23 23:48:48,314 | INFO     | PID=14341 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 00:49:41] 2025-11-23 23:48:48,314 | INFO     | .. there are 9 such processes running
[2025-11-24 00:49:41] 2025-11-23 23:48:48,734 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 00:49:41] 2025-11-23 23:48:48,734 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 00:49:41] 2025-11-23 23:48:48,734 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 00:49:41] 2025-11-23 23:48:48,735 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 00:49:41] 2025-11-23 23:48:48,735 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 00:49:41] 2025-11-23 23:48:48,735 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 00:49:41] 2025-11-23 23:48:48,735 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 00:49:41] 2025-11-23 23:48:48,735 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 00:49:41] 2025-11-23 23:48:48,735 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 00:49:41] 2025-11-23 23:48:48,735 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 00:49:41] 2025-11-23 23:48:48,735 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 00:49:41] 2025-11-23 23:48:48,735 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 00:49:41] 2025-11-23 23:48:48,735 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 00:49:41] 2025-11-23 23:48:48,735 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 00:49:41] 2025-11-23 23:48:48,736 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 00:49:41] 2025-11-23 23:48:48,736 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 00:49:41] 2025-11-23 23:48:48,736 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 00:49:41] 2025-11-23 23:48:48,736 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 00:49:41] 2025-11-23 23:48:48,736 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 00:49:41] 2025-11-23 23:48:48,736 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 00:49:41] 2025-11-23 23:48:48,736 | INFO     | job 6891571808 has completed (purged errors)
[2025-11-24 00:49:41] 2025-11-23 23:48:48,736 | INFO     | overall cleanup function is called
[2025-11-24 00:49:41] 2025-11-23 23:48:49,761 | INFO     | --- collectZombieJob: --- 10, [20905]
[2025-11-24 00:49:41] 2025-11-23 23:48:49,761 | INFO     | zombie collector waiting for pid 20905
[2025-11-24 00:49:41] 2025-11-23 23:48:49,761 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 00:49:41] 2025-11-23 23:48:49,761 | INFO     | collected zombie processes
[2025-11-24 00:49:41] 2025-11-23 23:48:49,761 | INFO     | will attempt to kill all subprocesses of pid=20905
[2025-11-24 00:49:41] 2025-11-23 23:48:49,889 | INFO     | process IDs to be killed: [20905] (in reverse order)
[2025-11-24 00:49:41] 2025-11-23 23:48:50,972 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 00:49:41] 2025-11-23 23:48:50,973 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 00:49:41] 2025-11-23 23:48:50,976 | INFO     | did not find any defunct processes belonging to 20905
[2025-11-24 00:49:41] 2025-11-23 23:48:50,980 | INFO     | did not find any defunct processes belonging to 20905
[2025-11-24 00:49:41] 2025-11-23 23:48:50,983 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 00:49:41] 2025-11-23 23:48:50,983 | INFO     | ready for new job
[2025-11-24 00:49:41] 2025-11-23 23:48:50,983 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 00:49:41] 2025-11-23 23:48:50,990 | INFO     | ***************************************
[2025-11-24 00:49:41] 2025-11-23 23:48:50,990 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 00:49:41] 2025-11-23 23:48:50,991 | INFO     | ***************************************
[2025-11-24 00:49:41] 2025-11-23 23:48:50,991 | INFO     | 
[2025-11-24 00:49:41] 2025-11-23 23:48:50,991 | INFO     | pilot is running in a VM
[2025-11-24 00:49:41] 2025-11-23 23:48:50,991 | INFO     | architecture information:
[2025-11-24 00:49:41] 2025-11-23 23:48:50,992 | INFO     | executing command: cat /etc/os-release
[2025-11-24 00:49:41] 2025-11-23 23:48:51,097 | INFO     | cat /etc/os-release:
[2025-11-24 00:49:41] NAME="CentOS Linux"
[2025-11-24 00:49:41] VERSION="7 (Core)"
[2025-11-24 00:49:41] ID="centos"
[2025-11-24 00:49:41] ID_LIKE="rhel fedora"
[2025-11-24 00:49:41] VERSION_ID="7"
[2025-11-24 00:49:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 00:49:41] ANSI_COLOR="0;31"
[2025-11-24 00:49:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 00:49:41] HOME_URL="https://www.centos.org/"
[2025-11-24 00:49:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 00:49:41] 
[2025-11-24 00:49:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 00:49:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 00:49:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 00:49:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 00:49:41] 
[2025-11-24 00:49:41] 2025-11-23 23:48:51,098 | INFO     | ***************************************
[2025-11-24 00:49:41] 2025-11-23 23:48:51,602 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-11-24 00:49:41] 2025-11-23 23:48:51,806 | INFO     | sufficient remaining disk space (494854471680 B)
[2025-11-24 00:49:41] 2025-11-23 23:48:51,807 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 00:49:41] 2025-11-23 23:48:51,807 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 00:49:41] 2025-11-23 23:48:51,807 | INFO     | update_server=False
[2025-11-24 00:49:41] 2025-11-23 23:48:51,807 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 00:49:41] 2025-11-23 23:48:52,019 | INFO     | all data control threads have been joined
[2025-11-24 00:49:41] 2025-11-23 23:48:52,377 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 00:49:41] 2025-11-23 23:48:52,377 | INFO     | aborting loop
[2025-11-24 00:49:41] 2025-11-23 23:48:52,537 | INFO     | all payload control threads have been joined
[2025-11-24 00:49:41] 2025-11-23 23:48:52,813 | INFO     | [job] retrieve thread has finished
[2025-11-24 00:49:41] 2025-11-23 23:48:53,025 | INFO     | [data] control thread has finished
[2025-11-24 00:49:41] 2025-11-23 23:48:53,032 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 00:49:41] 2025-11-23 23:48:53,142 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 00:49:41] 2025-11-23 23:48:53,230 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 00:49:41] 2025-11-23 23:48:53,255 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 00:49:41] 2025-11-23 23:48:53,258 | INFO     | [payload] validate_post thread has finished
[2025-11-24 00:49:41] 2025-11-23 23:48:53,348 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 00:49:41] 2025-11-23 23:48:53,384 | INFO     | [job] job monitor thread has finished
[2025-11-24 00:49:41] 2025-11-23 23:48:53,422 | INFO     | all job control threads have been joined
[2025-11-24 00:49:41] 2025-11-23 23:48:53,474 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 00:49:41] 2025-11-23 23:48:53,515 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 00:49:41] 2025-11-23 23:48:53,543 | INFO     | [payload] control thread has finished
[2025-11-24 00:49:41] 2025-11-23 23:48:53,714 | INFO     | [job] validate thread has finished
[2025-11-24 00:49:41] 2025-11-23 23:48:53,833 | INFO     | [payload] failed_post thread has finished
[2025-11-24 00:49:41] 2025-11-23 23:48:54,128 | INFO     | [data] copytool_in thread has finished
[2025-11-24 00:49:41] 2025-11-23 23:48:54,261 | INFO     | [job] queue monitor thread has finished
[2025-11-24 00:49:41] 2025-11-23 23:48:54,428 | INFO     | [job] control thread has finished
[2025-11-24 00:49:41] 2025-11-23 23:48:55,039 | INFO     | [data] copytool_out thread has finished
[2025-11-24 00:49:41] 2025-11-23 23:48:57,239 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 00:49:41] 2025-11-23 23:49:20,498 | INFO     | PID=14341 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 00:49:41] 2025-11-23 23:49:20,499 | INFO     | .. there are 9 such processes running
[2025-11-24 00:49:41] 2025-11-23 23:49:20,499 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 00:49:41] 2025-11-23 23:49:20,500 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 00:49:41] 2025-11-23 23:49:20,500 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 00:49:41] 2025-11-23 23:49:30,145 | INFO     | [monitor] cgroup control has ended
[2025-11-24 00:49:41] 2025-11-23 23:49:31,778 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140173936863040)>', '<ExcThread(monitor, started 140173346064128)>']
[2025-11-24 00:49:41] 2025-11-23 23:49:32,573 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 00:49:41] 2025-11-23 23:49:32,573 | INFO     | [monitor] control thread has ended
[2025-11-24 00:49:41] 2025-11-23 23:49:36,803 | INFO     | all workflow threads have been joined
[2025-11-24 00:49:41] 2025-11-23 23:49:36,803 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 00:49:41] 2025-11-23 23:49:36,803 | INFO     | traces error code: 0
[2025-11-24 00:49:41] 2025-11-23 23:49:36,804 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 00:49:41] 2025-11-23 23:49:37,171 [wrapper] ==== pilot stdout END ====
[2025-11-24 00:49:41] 2025-11-23 23:49:37,274 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 00:49:41] 2025-11-23 23:49:37,326 [wrapper] pilotpid: 14341
[2025-11-24 00:49:41] 2025-11-23 23:49:37,416 [wrapper] Pilot exit status: 0
[2025-11-24 00:49:41] 2025-11-23 23:49:37,808 [wrapper] pandaids: 6891571808
[2025-11-24 00:49:41] 2025-11-23 23:49:38,601 [wrapper] cleanup supervisor_pilot 30844 14342
[2025-11-24 00:49:41] 2025-11-23 23:49:38,704 [wrapper] Test setup, not cleaning
[2025-11-24 00:49:41] 2025-11-23 23:49:38,767 [wrapper] apfmon messages muted
[2025-11-24 00:49:41] 2025-11-23 23:49:38,832 [wrapper] ==== wrapper stdout END ====
[2025-11-24 00:49:41] 2025-11-23 23:49:38,924 [wrapper] ==== wrapper stderr END ====
[2025-11-24 00:49:41]  *** Error codes and diagnostics ***
[2025-11-24 00:49:41]     "exeErrorCode": 0,
[2025-11-24 00:49:41]     "exeErrorDiag": "",
[2025-11-24 00:49:41]     "pilotErrorCode": 0,
[2025-11-24 00:49:41]     "pilotErrorDiag": "",
[2025-11-24 00:49:41]  *** Listing of results directory ***
[2025-11-24 00:49:41] total 1324836
[2025-11-24 00:49:41] -rw-r--r--. 1 boinc boinc    576529 Nov 18 16:47 pilot3.tar.gz
[2025-11-24 00:49:41] -rw-r--r--. 1 boinc boinc      5112 Nov 18 17:03 queuedata.json
[2025-11-24 00:49:41] -rwx------. 1 boinc boinc     36292 Nov 18 17:03 runpilot2-wrapper.sh
[2025-11-24 00:49:41] -rw-r--r--. 1 boinc boinc       100 Nov 22 23:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 00:49:41] -rwxr-xr-x. 1 boinc boinc      7986 Nov 22 23:33 run_atlas
[2025-11-24 00:49:41] -rw-r--r--. 1 boinc boinc       105 Nov 22 23:33 job.xml
[2025-11-24 00:49:41] -rw-r--r--. 2 boinc boinc 409772199 Nov 22 23:33 EVNT.47493065._000303.pool.root.1
[2025-11-24 00:49:41] -rw-r--r--. 1 boinc boinc      6392 Nov 22 23:33 init_data.xml
[2025-11-24 00:49:41] -rw-r--r--. 2 boinc boinc     15120 Nov 22 23:33 start_atlas.sh
[2025-11-24 00:49:41] drwxrwx--x. 2 boinc boinc        68 Nov 22 23:33 shared
[2025-11-24 00:49:41] -rw-r--r--. 2 boinc boinc    590099 Nov 22 23:33 input.tar.gz
[2025-11-24 00:49:41] -rw-r--r--. 1 boinc boinc         0 Nov 22 23:33 boinc_lockfile
[2025-11-24 00:49:41] -rw-r--r--. 1 boinc boinc      2772 Nov 22 23:34 pandaJob.out
[2025-11-24 00:49:41] -rw-------. 1 boinc boinc    989784 Nov 22 23:37 agis_schedconf.cvmfs.json
[2025-11-24 00:49:41] drwx------. 5 boinc boinc      4096 Nov 22 23:37 pilot3
[2025-11-24 00:49:41] -rw-r--r--. 1 boinc boinc       533 Nov 24 00:23 boinc_task_state.xml
[2025-11-24 00:49:41] -rw-------. 1 boinc boinc 913784726 Nov 24 00:45 HITS.47493068._003025.pool.root.1
[2025-11-24 00:49:41] -rw-------. 1 boinc boinc      1031 Nov 24 00:46 memory_monitor_summary.json
[2025-11-24 00:49:41] -rw-------. 1 boinc boinc   1526164 Nov 24 00:47 agis_ddmendpoints.agis.ALL.json
[2025-11-24 00:49:41] -rw-------. 1 boinc boinc   2551582 Nov 24 00:47 log.47493068._003025.job.log.tgz.1
[2025-11-24 00:49:41] -rw-------. 1 boinc boinc      7945 Nov 24 00:48 heartbeat.json
[2025-11-24 00:49:41] -rw-------. 1 boinc boinc        95 Nov 24 00:49 pilot_heartbeat.json
[2025-11-24 00:49:41] -rw-------. 1 boinc boinc      4884 Nov 24 00:49 pilotlog.txt
[2025-11-24 00:49:41] -rw-r--r--. 1 boinc boinc      8192 Nov 24 00:49 boinc_mmap_file
[2025-11-24 00:49:41] -rw-r--r--. 1 boinc boinc        29 Nov 24 00:49 wrapper_checkpoint.txt
[2025-11-24 00:49:41] -rw-------. 1 boinc boinc  12034994 Nov 24 00:49 log.47493068._003025.job.log.1
[2025-11-24 00:49:41] -rw-------. 1 boinc boinc       353 Nov 24 00:49 output.list
[2025-11-24 00:49:41] -rw-r--r--. 1 boinc boinc       620 Nov 24 00:49 runtime_log
[2025-11-24 00:49:41] -rw-------. 1 boinc boinc  14602240 Nov 24 00:49 result.tar.gz
[2025-11-24 00:49:41] -rw-r--r--. 1 boinc boinc      8703 Nov 24 00:49 runtime_log.err
[2025-11-24 00:49:41] -rw-------. 1 boinc boinc       662 Nov 24 00:49 9BnLDmVMdf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIjFKDmLJcDKm.diag
[2025-11-24 00:49:41] -rw-r--r--. 1 boinc boinc     21249 Nov 24 00:49 stderr.txt
[2025-11-24 00:49:41] HITS file was successfully produced:
[2025-11-24 00:49:41] -rw-------. 1 boinc boinc 913784726 Nov 24 00:45 shared/HITS.pool.root.1
[2025-11-24 00:49:41]  *** Contents of shared directory: ***
[2025-11-24 00:49:41] total 1307396
[2025-11-24 00:49:41] -rw-r--r--. 2 boinc boinc 409772199 Nov 22 23:33 ATLAS.root_0
[2025-11-24 00:49:41] -rw-r--r--. 2 boinc boinc     15120 Nov 22 23:33 start_atlas.sh
[2025-11-24 00:49:41] -rw-r--r--. 2 boinc boinc    590099 Nov 22 23:33 input.tar.gz
[2025-11-24 00:49:41] -rw-------. 1 boinc boinc 913784726 Nov 24 00:45 HITS.pool.root.1
[2025-11-24 00:49:41] -rw-------. 1 boinc boinc  14602240 Nov 24 00:49 result.tar.gz
00:49:42 (10543): run_atlas exited; CPU time 336307.946765
00:49:42 (10543): called boinc_finish(0)

</stderr_txt>
]]>

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