Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:51:50 (3401288): wrapper (7.7.26015): starting
07:51:50 (3401288): wrapper: running run_atlas (--nthreads 3)
[2025-11-23 07:51:50] Arguments: --nthreads 3
[2025-11-23 07:51:50] Threads: 3
[2025-11-23 07:51:50] Checking for CVMFS
[2025-11-23 07:51:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 07:51:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 07:51:51] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 07:51:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 07:51:51] 2.9.2.0 3210869 1440 68696 153199 2 81 30088951 36864001 0 130560 0 529813 99.978 50214 20354 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-23 07:51:51] CVMFS is ok
[2025-11-23 07:51:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 07:51:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 07:51:51] Further information can be found at the LHC@home message board.
[2025-11-23 07:51:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 07:51:51] Checking for apptainer binary...
[2025-11-23 07:51:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 07:51:51] Running /usr/bin/apptainer --version
[2025-11-23 07:51:51] apptainer version 1.4.1-1.1
[2025-11-23 07:51:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 07:51:51] itA179
[2025-11-23 07:51:51] apptainer works
[2025-11-23 07:51:51] Set ATHENA_PROC_NUMBER=3
[2025-11-23 07:51:51] Set ATHENA_CORE_NUMBER=3
[2025-11-23 07:51:51] Starting ATLAS job with PandaID=6891071715
[2025-11-23 07:51:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
10:47:29 (3434284): wrapper (7.7.26015): starting
10:47:29 (3434284): wrapper: running run_atlas (--nthreads 3)
[2025-11-23 10:47:29] Arguments: --nthreads 3
[2025-11-23 10:47:29] Threads: 3
[2025-11-23 10:47:29] This job has been restarted, cleaning up previous attempt
[2025-11-23 10:47:29] Checking for CVMFS
[2025-11-23 10:47:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 10:47:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 10:47:30] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 10:47:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 10:47:30] 2.9.2.0 3434409 0 29996 153203 4 1 30100866 36864000 0 130560 0 0 100.000 0 0 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-23 10:47:30] CVMFS is ok
[2025-11-23 10:47:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 10:47:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 10:47:30] Further information can be found at the LHC@home message board.
[2025-11-23 10:47:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 10:47:30] Checking for apptainer binary...
[2025-11-23 10:47:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 10:47:30] Running /usr/bin/apptainer --version
[2025-11-23 10:47:30] apptainer version 1.4.1-1.1
[2025-11-23 10:47:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 10:47:31] itA179
[2025-11-23 10:47:31] apptainer works
[2025-11-23 10:47:31] Set ATHENA_PROC_NUMBER=3
[2025-11-23 10:47:31] Set ATHENA_CORE_NUMBER=3
[2025-11-23 10:47:31] Starting ATLAS job with PandaID=6891071715
[2025-11-23 10:47:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 18:55:17]  *** The last 200 lines of the pilot log: ***
[2025-11-23 18:55:17] 2025-11-23 17:54:40,327 | INFO     | monitor loop #2225: job 0:6891071715 is in state 'finished'
[2025-11-23 18:55:17] 2025-11-23 17:54:40,328 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 18:55:17] 2025-11-23 17:54:40,553 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 18:55:17] 2025-11-23 17:54:40,554 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3812.3645833333335
[2025-11-23 18:55:17] 2025-11-23 17:54:40,555 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6891071715/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 18:55:17] 2025-11-23 17:54:40,555 | INFO     | extracted standard info from prmon json
[2025-11-23 18:55:17] 2025-11-23 17:54:40,555 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 18:55:17] 2025-11-23 17:54:40,555 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 18:55:17] 2025-11-23 17:54:40,558 | INFO     | fitting pss+swap vs Time
[2025-11-23 18:55:17] 2025-11-23 17:54:40,558 | INFO     | sum of square deviations: 34078704080.0
[2025-11-23 18:55:17] 2025-11-23 17:54:40,560 | INFO     | sum of deviations: 236786705531.00003
[2025-11-23 18:55:17] 2025-11-23 17:54:40,560 | INFO     | mean x: 1763905857.0
[2025-11-23 18:55:17] 2025-11-23 17:54:40,560 | INFO     | mean y: 2212469.929018789
[2025-11-23 18:55:17] 2025-11-23 17:54:40,560 | INFO     | intersect: -12253812752.314857
[2025-11-23 18:55:17] 2025-11-23 17:54:40,561 | INFO     | chi2: 3.160650341078381
[2025-11-23 18:55:17] 2025-11-23 17:54:40,561 | INFO     | sum of square deviations: 33022619162.5
[2025-11-23 18:55:17] 2025-11-23 17:54:40,562 | INFO     | sum of deviations: 283822430407.99994
[2025-11-23 18:55:17] 2025-11-23 17:54:40,563 | INFO     | mean x: 1763905704.5
[2025-11-23 18:55:17] 2025-11-23 17:54:40,563 | INFO     | mean y: 2219226.594936709
[2025-11-23 18:55:17] 2025-11-23 17:54:40,563 | INFO     | intersect: -15158177397.25131
[2025-11-23 18:55:17] 2025-11-23 17:54:40,563 | INFO     | chi2: 2.288140841201779
[2025-11-23 18:55:17] 2025-11-23 17:54:40,563 | INFO     | current chi2=2.288140841201779 (change=27.60537882146466 %)
[2025-11-23 18:55:17] 2025-11-23 17:54:40,563 | INFO     | sum of square deviations: 31988581170.0
[2025-11-23 18:55:17] 2025-11-23 17:54:40,565 | INFO     | sum of deviations: 280527838281.00006
[2025-11-23 18:55:17] 2025-11-23 17:54:40,565 | INFO     | mean x: 1763905552.0
[2025-11-23 18:55:17] 2025-11-23 17:54:40,565 | INFO     | mean y: 2218740.646055437
[2025-11-23 18:55:17] 2025-11-23 17:54:40,565 | INFO     | intersect: -15466570225.163963
[2025-11-23 18:55:17] 2025-11-23 17:54:40,565 | INFO     | chi2: 2.2848400775835582
[2025-11-23 18:55:17] 2025-11-23 17:54:40,565 | INFO     | current chi2=2.2848400775835582 (change=0.14425526430826388 %)
[2025-11-23 18:55:17] 2025-11-23 17:54:40,565 | INFO     | right removable region: 468
[2025-11-23 18:55:17] 2025-11-23 17:54:40,565 | INFO     | sum of square deviations: 33022619162.5
[2025-11-23 18:55:17] 2025-11-23 17:54:40,567 | INFO     | sum of deviations: 137029827697.99997
[2025-11-23 18:55:17] 2025-11-23 17:54:40,567 | INFO     | mean x: 1763906009.5
[2025-11-23 18:55:17] 2025-11-23 17:54:40,567 | INFO     | mean y: 2226853.776371308
[2025-11-23 18:55:17] 2025-11-23 17:54:40,567 | INFO     | intersect: -7317233040.299246
[2025-11-23 18:55:17] 2025-11-23 17:54:40,567 | INFO     | chi2: 1.1105028806144017
[2025-11-23 18:55:17] 2025-11-23 17:54:40,567 | INFO     | current chi2=1.1105028806144017 (change=64.86473476102675 %)
[2025-11-23 18:55:17] 2025-11-23 17:54:40,567 | INFO     | sum of square deviations: 31988581170.0
[2025-11-23 18:55:17] 2025-11-23 17:54:40,569 | INFO     | sum of deviations: 113477763382.99997
[2025-11-23 18:55:17] 2025-11-23 17:54:40,569 | INFO     | mean x: 1763906162.0
[2025-11-23 18:55:17] 2025-11-23 17:54:40,569 | INFO     | mean y: 2230312.8614072492
[2025-11-23 18:55:17] 2025-11-23 17:54:40,569 | INFO     | intersect: -6255131494.3878765
[2025-11-23 18:55:17] 2025-11-23 17:54:40,569 | INFO     | chi2: 0.9498007726507338
[2025-11-23 18:55:17] 2025-11-23 17:54:40,569 | INFO     | current chi2=0.9498007726507338 (change=14.471111310828583 %)
[2025-11-23 18:55:17] 2025-11-23 17:54:40,570 | INFO     | left removable region: 20
[2025-11-23 18:55:17] 2025-11-23 17:54:40,570 | INFO     | sum of square deviations: 27881125552.0
[2025-11-23 18:55:17] 2025-11-23 17:54:40,571 | INFO     | sum of deviations: 142035653160.5
[2025-11-23 18:55:17] 2025-11-23 17:54:40,571 | INFO     | mean x: 1763906131.5
[2025-11-23 18:55:17] 2025-11-23 17:54:40,571 | INFO     | mean y: 2239674.636160714
[2025-11-23 18:55:17] 2025-11-23 17:54:40,571 | INFO     | intersect: -8983680174.049484
[2025-11-23 18:55:17] 2025-11-23 17:54:40,572 | INFO     | chi2: 0.0663928155891748
[2025-11-23 18:55:17] 2025-11-23 17:54:40,572 | INFO     | current memory leak: 5.09 B/s (using 448 data points, chi2=0.07)
[2025-11-23 18:55:17] 2025-11-23 17:54:40,572 | INFO     | could have reported an average CPU frequency of 3918 MHz (20 samples)
[2025-11-23 18:55:17] 2025-11-23 17:54:40,572 | INFO     | ..............................
[2025-11-23 18:55:17] 2025-11-23 17:54:40,572 | INFO     | . Timing measurements:
[2025-11-23 18:55:17] 2025-11-23 17:54:40,572 | INFO     | . get job = 0 s
[2025-11-23 18:55:17] 2025-11-23 17:54:40,572 | INFO     | . initial setup = 0 s
[2025-11-23 18:55:17] 2025-11-23 17:54:40,572 | INFO     | . payload setup = 3 s
[2025-11-23 18:55:17] 2025-11-23 17:54:40,572 | INFO     | . stage-in = 0 s
[2025-11-23 18:55:17] 2025-11-23 17:54:40,572 | INFO     | . payload execution = 29194 s
[2025-11-23 18:55:17] 2025-11-23 17:54:40,572 | INFO     | . stage-out = 0 s
[2025-11-23 18:55:17] 2025-11-23 17:54:40,572 | INFO     | . log creation = 0 s
[2025-11-23 18:55:17] 2025-11-23 17:54:40,572 | INFO     | ..............................
[2025-11-23 18:55:17] 2025-11-23 17:54:40,737 | INFO     | 
[2025-11-23 18:55:17] 2025-11-23 17:54:40,738 | INFO     | job summary report
[2025-11-23 18:55:17] 2025-11-23 17:54:40,738 | INFO     | --------------------------------------------------
[2025-11-23 18:55:17] 2025-11-23 17:54:40,738 | INFO     | PanDA job id: 6891071715
[2025-11-23 18:55:17] 2025-11-23 17:54:40,738 | INFO     | task id: 47483661
[2025-11-23 18:55:17] 2025-11-23 17:54:40,738 | INFO     | errors: (none)
[2025-11-23 18:55:17] 2025-11-23 17:54:40,738 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 18:55:17] 2025-11-23 17:54:40,738 | INFO     | pilot state: finished 
[2025-11-23 18:55:17] 2025-11-23 17:54:40,738 | INFO     | transexitcode: 0
[2025-11-23 18:55:17] 2025-11-23 17:54:40,738 | INFO     | exeerrorcode: 0
[2025-11-23 18:55:17] 2025-11-23 17:54:40,738 | INFO     | exeerrordiag: 
[2025-11-23 18:55:17] 2025-11-23 17:54:40,738 | INFO     | exitcode: 0
[2025-11-23 18:55:17] 2025-11-23 17:54:40,738 | INFO     | exitmsg: OK
[2025-11-23 18:55:17] 2025-11-23 17:54:40,738 | INFO     | cpuconsumptiontime: 86207 s
[2025-11-23 18:55:17] 2025-11-23 17:54:40,738 | INFO     | nevents: 1000
[2025-11-23 18:55:17] 2025-11-23 17:54:40,738 | INFO     | neventsw: 0
[2025-11-23 18:55:17] 2025-11-23 17:54:40,738 | INFO     | pid: 3444939
[2025-11-23 18:55:17] 2025-11-23 17:54:40,738 | INFO     | pgrp: 3444939
[2025-11-23 18:55:17] 2025-11-23 17:54:40,738 | INFO     | corecount: 3
[2025-11-23 18:55:17] 2025-11-23 17:54:40,738 | INFO     | event service: False
[2025-11-23 18:55:17] 2025-11-23 17:54:40,738 | INFO     | sizes: {0: 2298799, 2: 2299061, 11: 2299089, 29200: 2338123, 29202: 2347123, 29203: 2347179, 29208: 2347581}
[2025-11-23 18:55:17] 2025-11-23 17:54:40,738 | INFO     | --------------------------------------------------
[2025-11-23 18:55:17] 2025-11-23 17:54:40,738 | INFO     | 
[2025-11-23 18:55:17] 2025-11-23 17:54:40,738 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-23 18:55:17] 2025-11-23 17:54:40,753 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 18:55:17] 2025-11-23 17:54:40,753 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 18:55:17] 2025-11-23 17:54:40,753 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 18:55:17] 2025-11-23 17:54:40,754 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 18:55:17] 2025-11-23 17:54:40,754 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 18:55:17] 2025-11-23 17:54:40,754 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 18:55:17] 2025-11-23 17:54:40,754 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 18:55:17] 2025-11-23 17:54:40,754 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 18:55:17] 2025-11-23 17:54:40,754 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 18:55:17] 2025-11-23 17:54:40,754 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 18:55:17] 2025-11-23 17:54:40,754 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 18:55:17] 2025-11-23 17:54:40,754 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 18:55:17] 2025-11-23 17:54:40,754 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 18:55:17] 2025-11-23 17:54:40,754 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 18:55:17] 2025-11-23 17:54:40,754 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 18:55:17] 2025-11-23 17:54:40,754 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 18:55:17] 2025-11-23 17:54:40,754 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 18:55:17] 2025-11-23 17:54:40,754 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 18:55:17] 2025-11-23 17:54:40,754 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 18:55:17] 2025-11-23 17:54:40,754 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 18:55:17] 2025-11-23 17:54:40,754 | INFO     | job 6891071715 has completed (purged errors)
[2025-11-23 18:55:17] 2025-11-23 17:54:40,754 | INFO     | overall cleanup function is called
[2025-11-23 18:55:17] 2025-11-23 17:54:41,763 | INFO     | --- collectZombieJob: --- 10, [3444939]
[2025-11-23 18:55:17] 2025-11-23 17:54:41,763 | INFO     | zombie collector waiting for pid 3444939
[2025-11-23 18:55:17] 2025-11-23 17:54:41,763 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 18:55:17] 2025-11-23 17:54:41,764 | INFO     | collected zombie processes
[2025-11-23 18:55:17] 2025-11-23 17:54:41,764 | INFO     | will attempt to kill all subprocesses of pid=3444939
[2025-11-23 18:55:17] 2025-11-23 17:54:41,806 | INFO     | process IDs to be killed: [3444939] (in reverse order)
[2025-11-23 18:55:17] 2025-11-23 17:54:41,829 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 18:55:17] 2025-11-23 17:54:41,830 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 18:55:17] 2025-11-23 17:54:41,831 | INFO     | did not find any defunct processes belonging to 3444939
[2025-11-23 18:55:17] 2025-11-23 17:54:41,832 | INFO     | did not find any defunct processes belonging to 3444939
[2025-11-23 18:55:17] 2025-11-23 17:54:41,832 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 18:55:17] 2025-11-23 17:54:41,832 | INFO     | ready for new job
[2025-11-23 18:55:17] 2025-11-23 17:54:41,832 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 18:55:17] 2025-11-23 17:54:41,834 | INFO     | ***************************************
[2025-11-23 18:55:17] 2025-11-23 17:54:41,834 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 18:55:17] 2025-11-23 17:54:41,834 | INFO     | ***************************************
[2025-11-23 18:55:17] 2025-11-23 17:54:41,834 | INFO     | 
[2025-11-23 18:55:17] 2025-11-23 17:54:41,834 | INFO     | architecture information:
[2025-11-23 18:55:17] 2025-11-23 17:54:41,834 | INFO     | executing command: cat /etc/os-release
[2025-11-23 18:55:17] 2025-11-23 17:54:41,843 | INFO     | cat /etc/os-release:
[2025-11-23 18:55:17] NAME="CentOS Linux"
[2025-11-23 18:55:17] VERSION="7 (Core)"
[2025-11-23 18:55:17] ID="centos"
[2025-11-23 18:55:17] ID_LIKE="rhel fedora"
[2025-11-23 18:55:17] VERSION_ID="7"
[2025-11-23 18:55:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 18:55:17] ANSI_COLOR="0;31"
[2025-11-23 18:55:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 18:55:17] HOME_URL="https://www.centos.org/"
[2025-11-23 18:55:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 18:55:17] 
[2025-11-23 18:55:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 18:55:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 18:55:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 18:55:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 18:55:17] 
[2025-11-23 18:55:17] 2025-11-23 17:54:41,843 | INFO     | ***************************************
[2025-11-23 18:55:17] 2025-11-23 17:54:42,346 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-23 18:55:17] 2025-11-23 17:54:42,358 | INFO     | sufficient remaining disk space (126360748032 B)
[2025-11-23 18:55:17] 2025-11-23 17:54:42,358 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 18:55:17] 2025-11-23 17:54:42,358 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 18:55:17] 2025-11-23 17:54:42,358 | INFO     | update_server=False
[2025-11-23 18:55:17] 2025-11-23 17:54:42,358 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 18:55:17] 2025-11-23 17:54:42,358 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 18:55:17] 2025-11-23 17:54:42,358 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 18:55:17] 2025-11-23 17:54:42,439 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 18:55:17] 2025-11-23 17:54:42,527 | INFO     | all payload control threads have been joined
[2025-11-23 18:55:17] 2025-11-23 17:54:42,831 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-23 18:55:17] 2025-11-23 17:54:42,832 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-23 18:55:17] 2025-11-23 17:54:42,832 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 18:55:17] 2025-11-23 17:54:42,832 | INFO     | will abort loop
[2025-11-23 18:55:17] 2025-11-23 17:54:43,042 | INFO     | all data control threads have been joined
[2025-11-23 18:55:17] 2025-11-23 17:54:43,258 | INFO     | all job control threads have been joined
[2025-11-23 18:55:17] 2025-11-23 17:54:43,364 | INFO     | [job] retrieve thread has finished
[2025-11-23 18:55:17] 2025-11-23 17:54:43,364 | INFO     | [job] queue monitor thread has finished
[2025-11-23 18:55:17] 2025-11-23 17:54:43,378 | INFO     | [payload] failed_post thread has finished
[2025-11-23 18:55:17] 2025-11-23 17:54:43,533 | INFO     | [payload] control thread has finished
[2025-11-23 18:55:17] 2025-11-23 17:54:43,601 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 18:55:17] 2025-11-23 17:54:43,757 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 18:55:17] 2025-11-23 17:54:43,837 | INFO     | [job] job monitor thread has finished
[2025-11-23 18:55:17] 2025-11-23 17:54:44,047 | INFO     | [data] control thread has finished
[2025-11-23 18:55:17] 2025-11-23 17:54:44,255 | INFO     | [data] copytool_in thread has finished
[2025-11-23 18:55:17] 2025-11-23 17:54:44,262 | INFO     | [job] control thread has finished
[2025-11-23 18:55:17] 2025-11-23 17:54:44,445 | INFO     | [data] copytool_out thread has finished
[2025-11-23 18:55:17] 2025-11-23 17:54:44,449 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 18:55:17] 2025-11-23 17:54:44,493 | INFO     | [payload] validate_post thread has finished
[2025-11-23 18:55:17] 2025-11-23 17:54:44,702 | INFO     | [job] validate thread has finished
[2025-11-23 18:55:17] 2025-11-23 17:54:44,772 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 18:55:17] 2025-11-23 17:54:46,365 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 18:55:17] 2025-11-23 17:55:11,706 | INFO     | [monitor] cgroup control has ended
[2025-11-23 18:55:17] 2025-11-23 17:55:12,070 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139827244930880)>', '<ExcThread(monitor, started 139826976233216)>']
[2025-11-23 18:55:17] 2025-11-23 17:55:13,164 | INFO     | PID=3438491 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 18:55:17] 2025-11-23 17:55:13,165 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 18:55:17] 2025-11-23 17:55:13,165 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 18:55:17] 2025-11-23 17:55:13,165 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 18:55:17] 2025-11-23 17:55:13,165 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 18:55:17] 2025-11-23 17:55:13,165 | INFO     | [monitor] control thread has ended
[2025-11-23 18:55:17] 2025-11-23 17:55:17,095 | INFO     | all workflow threads have been joined
[2025-11-23 18:55:17] 2025-11-23 17:55:17,096 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 18:55:17] 2025-11-23 17:55:17,096 | INFO     | traces error code: 0
[2025-11-23 18:55:17] 2025-11-23 17:55:17,096 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 18:55:17] 2025-11-23 17:55:17,144 [wrapper] ==== pilot stdout END ====
[2025-11-23 18:55:17] 2025-11-23 17:55:17,147 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 18:55:17] 2025-11-23 17:55:17,149 [wrapper] pilotpid: 3438491
[2025-11-23 18:55:17] 2025-11-23 17:55:17,151 [wrapper] Pilot exit status: 0
[2025-11-23 18:55:17] 2025-11-23 17:55:17,158 [wrapper] pandaids: 6891071715 6891071715
[2025-11-23 18:55:17] 2025-11-23 17:55:17,174 [wrapper] cleanup supervisor_pilot 3498456 3438492
[2025-11-23 18:55:17] 2025-11-23 17:55:17,176 [wrapper] Test setup, not cleaning
[2025-11-23 18:55:17] 2025-11-23 17:55:17,179 [wrapper] apfmon messages muted
[2025-11-23 18:55:17] 2025-11-23 17:55:17,181 [wrapper] ==== wrapper stdout END ====
[2025-11-23 18:55:17] 2025-11-23 17:55:17,183 [wrapper] ==== wrapper stderr END ====
[2025-11-23 18:55:17]  *** Error codes and diagnostics ***
[2025-11-23 18:55:17]     "exeErrorCode": 0,
[2025-11-23 18:55:17]     "exeErrorDiag": "",
[2025-11-23 18:55:17]     "pilotErrorCode": 0,
[2025-11-23 18:55:17]     "pilotErrorDiag": "",
[2025-11-23 18:55:17]  *** Listing of results directory ***
[2025-11-23 18:55:17] total 1723068
[2025-11-23 18:55:17] drwx------ 5 boinc boinc      4096 Nov  5 18:16 pilot3
[2025-11-23 18:55:17] -rw-r--r-- 1 boinc boinc    576529 Nov 18 06:55 pilot3.tar.gz
[2025-11-23 18:55:17] -rwx------ 1 boinc boinc     36292 Nov 18 06:59 runpilot2-wrapper.sh
[2025-11-23 18:55:17] -rw-r--r-- 1 boinc boinc      5112 Nov 18 06:59 queuedata.json
[2025-11-23 18:55:17] -rw-r--r-- 1 boinc boinc       100 Nov 23 07:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 18:55:17] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 07:51 run_atlas
[2025-11-23 18:55:17] -rw-r--r-- 1 boinc boinc       105 Nov 23 07:51 job.xml
[2025-11-23 18:55:17] -rw-r--r-- 3 boinc boinc 410405260 Nov 23 07:51 EVNT.47483658._000162.pool.root.1
[2025-11-23 18:55:17] -rw-r--r-- 3 boinc boinc 410405260 Nov 23 07:51 ATLAS.root_0
[2025-11-23 18:55:17] -rw-r--r-- 2 boinc boinc    590097 Nov 23 07:51 input.tar.gz
[2025-11-23 18:55:17] -rw-r--r-- 2 boinc boinc     15120 Nov 23 07:51 start_atlas.sh
[2025-11-23 18:55:17] drwxrwx--x 2 boinc boinc      4096 Nov 23 07:51 shared
[2025-11-23 18:55:17] -rw-r--r-- 1 boinc boinc         0 Nov 23 07:51 boinc_setup_complete
[2025-11-23 18:55:17] -rw-r--r-- 1 boinc boinc         0 Nov 23 07:51 boinc_lockfile
[2025-11-23 18:55:17] -rw-r--r-- 1 boinc boinc      6448 Nov 23 10:47 init_data.xml
[2025-11-23 18:55:17] -rw-r--r-- 1 boinc boinc      2773 Nov 23 10:47 pandaJob.out
[2025-11-23 18:55:17] -rw------- 1 boinc boinc    989784 Nov 23 10:47 agis_schedconf.cvmfs.json
[2025-11-23 18:55:17] -rw-r--r-- 1 boinc boinc       532 Nov 23 18:50 boinc_task_state.xml
[2025-11-23 18:55:17] -rw------- 1 boinc boinc 929115753 Nov 23 18:54 HITS.47483661._001620.pool.root.1
[2025-11-23 18:55:17] -rw------- 1 boinc boinc      1026 Nov 23 18:54 memory_monitor_summary.json
[2025-11-23 18:55:17] -rw------- 1 boinc boinc   1526164 Nov 23 18:54 agis_ddmendpoints.agis.ALL.json
[2025-11-23 18:55:17] -rw------- 1 boinc boinc   1170822 Nov 23 18:54 log.47483661._001620.job.log.tgz.1
[2025-11-23 18:55:17] -rw------- 1 boinc boinc      8567 Nov 23 18:54 heartbeat.json
[2025-11-23 18:55:17] -rw-r--r-- 1 boinc boinc      8192 Nov 23 18:54 boinc_mmap_file
[2025-11-23 18:55:17] -rw-r--r-- 1 boinc boinc        29 Nov 23 18:54 wrapper_checkpoint.txt
[2025-11-23 18:55:17] -rw------- 1 boinc boinc        96 Nov 23 18:55 pilot_heartbeat.json
[2025-11-23 18:55:17] -rw------- 1 boinc boinc      4938 Nov 23 18:55 pilotlog.txt
[2025-11-23 18:55:17] -rw------- 1 boinc boinc   4114875 Nov 23 18:55 log.47483661._001620.job.log.1
[2025-11-23 18:55:17] -rw------- 1 boinc boinc       353 Nov 23 18:55 output.list
[2025-11-23 18:55:17] -rw-r--r-- 1 boinc boinc       620 Nov 23 18:55 runtime_log
[2025-11-23 18:55:17] -rw------- 1 boinc boinc   5304320 Nov 23 18:55 result.tar.gz
[2025-11-23 18:55:17] -rw-r--r-- 1 boinc boinc      8863 Nov 23 18:55 runtime_log.err
[2025-11-23 18:55:17] -rw------- 1 boinc boinc       790 Nov 23 18:55 lGHLDmtvTf8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdJKODmZ99xem.diag
[2025-11-23 18:55:17] -rw-r--r-- 1 boinc boinc     23371 Nov 23 18:55 stderr.txt
[2025-11-23 18:55:17] HITS file was successfully produced:
[2025-11-23 18:55:17] -rw------- 1 boinc boinc 929115753 Nov 23 18:54 shared/HITS.pool.root.1
[2025-11-23 18:55:17]  *** Contents of shared directory: ***
[2025-11-23 18:55:17] total 1313912
[2025-11-23 18:55:17] -rw-r--r-- 3 boinc boinc 410405260 Nov 23 07:51 ATLAS.root_0
[2025-11-23 18:55:17] -rw-r--r-- 2 boinc boinc    590097 Nov 23 07:51 input.tar.gz
[2025-11-23 18:55:17] -rw-r--r-- 2 boinc boinc     15120 Nov 23 07:51 start_atlas.sh
[2025-11-23 18:55:17] -rw------- 1 boinc boinc 929115753 Nov 23 18:54 HITS.pool.root.1
[2025-11-23 18:55:17] -rw------- 1 boinc boinc   5304320 Nov 23 18:55 result.tar.gz
18:55:18 (3434284): run_atlas exited; CPU time 86239.427671
18:55:18 (3434284): called boinc_finish(0)

</stderr_txt>
]]>

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