Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:25:04 (1045): wrapper (7.7.26015): starting
15:25:04 (1045): wrapper: running run_atlas (--nthreads 12)
[2025-11-19 15:25:04] Arguments: --nthreads 12
[2025-11-19 15:25:04] Threads: 12
[2025-11-19 15:25:04] Checking for CVMFS
[2025-11-19 15:25:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 15:25:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 15:25:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 15:25:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 15:25:04] 2.11.2.0 2984 278032 91180 153056 1 81 20014752 20275201 1 130560 1 126521673 99.979 15791156 13900 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-19 15:25:04] CVMFS is ok
[2025-11-19 15:25:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-19 15:25:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-19 15:25:04] Further information can be found at the LHC@home message board.
[2025-11-19 15:25:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 15:25:04] Checking for apptainer binary...
[2025-11-19 15:25:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 15:25:04] Running /usr/bin/apptainer --version
[2025-11-19 15:25:04] apptainer version 1.3.2-1.el7
[2025-11-19 15:25:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 15:25:06] c-205-26.aglt2.org
[2025-11-19 15:25:06] apptainer works
[2025-11-19 15:25:06] Set ATHENA_PROC_NUMBER=12
[2025-11-19 15:25:06] Set ATHENA_CORE_NUMBER=12
[2025-11-19 15:25:06] Starting ATLAS job with PandaID=6886208174
[2025-11-19 15:25:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-19 20:08:53]  *** The last 200 lines of the pilot log: ***
[2025-11-19 20:08:53] 2025-11-20 01:07:50,481 | INFO     | time since job start (16949s) is within the limit (172800.0s)
[2025-11-19 20:08:53] 2025-11-20 01:07:52,024 | INFO     | monitor loop #1276: job 0:6886208174 is in state 'finished'
[2025-11-19 20:08:53] 2025-11-20 01:07:52,025 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-19 20:08:53] 2025-11-20 01:07:52,486 | INFO     | time since job start (16951s) is within the limit (172800.0s)
[2025-11-19 20:08:53] 2025-11-20 01:07:54,313 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-19 20:08:53] 2025-11-20 01:07:54,317 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-11-19 20:08:53] 2025-11-20 01:07:54,318 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6886208174/memory_monitor_summary.json (trf name=prmon)
[2025-11-19 20:08:53] 2025-11-20 01:07:54,319 | INFO     | extracted standard info from prmon json
[2025-11-19 20:08:53] 2025-11-20 01:07:54,319 | INFO     | extracted standard memory fields from prmon json
[2025-11-19 20:08:53] 2025-11-20 01:07:54,319 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-19 20:08:53] 2025-11-20 01:07:54,323 | INFO     | fitting pss+swap vs Time
[2025-11-19 20:08:53] 2025-11-20 01:07:54,324 | INFO     | sum of square deviations: 6662031864.474858
[2025-11-19 20:08:53] 2025-11-20 01:07:54,326 | INFO     | sum of deviations: 127283939018.38835
[2025-11-19 20:08:53] 2025-11-20 01:07:54,326 | INFO     | mean x: 1763592404.6043165
[2025-11-19 20:08:53] 2025-11-20 01:07:54,326 | INFO     | mean y: 3898079.176258993
[2025-11-19 20:08:53] 2025-11-20 01:07:54,326 | INFO     | intersect: -33691075563.61993
[2025-11-19 20:08:53] 2025-11-20 01:07:54,326 | INFO     | chi2: 5.7366575116759995
[2025-11-19 20:08:53] 2025-11-20 01:07:54,327 | INFO     | sum of square deviations: 6309001531.919435
[2025-11-19 20:08:53] 2025-11-20 01:07:54,329 | INFO     | sum of deviations: 248629165381.69968
[2025-11-19 20:08:53] 2025-11-20 01:07:54,329 | INFO     | mean x: 1763592252.1062272
[2025-11-19 20:08:53] 2025-11-20 01:07:54,329 | INFO     | mean y: 3950369.941391941
[2025-11-19 20:08:53] 2025-11-20 01:07:54,329 | INFO     | intersect: -69496820472.54106
[2025-11-19 20:08:53] 2025-11-20 01:07:54,329 | INFO     | chi2: 2.6688860483530616
[2025-11-19 20:08:53] 2025-11-20 01:07:54,329 | INFO     | current chi2=2.6688860483530616 (change=53.47663612615894 %)
[2025-11-19 20:08:53] 2025-11-20 01:07:54,330 | INFO     | sum of square deviations: 5968652702.074618
[2025-11-19 20:08:53] 2025-11-20 01:07:54,332 | INFO     | sum of deviations: 256236486998.94028
[2025-11-19 20:08:53] 2025-11-20 01:07:54,332 | INFO     | mean x: 1763592099.6044776
[2025-11-19 20:08:53] 2025-11-20 01:07:54,332 | INFO     | mean y: 3953684.7164179105
[2025-11-19 20:08:53] 2025-11-20 01:07:54,332 | INFO     | intersect: -75707713027.71664
[2025-11-19 20:08:53] 2025-11-20 01:07:54,332 | INFO     | chi2: 2.529825898379101
[2025-11-19 20:08:53] 2025-11-20 01:07:54,332 | INFO     | current chi2=2.529825898379101 (change=5.210419158201712 %)
[2025-11-19 20:08:53] 2025-11-20 01:07:54,333 | INFO     | right removable region: 267
[2025-11-19 20:08:53] 2025-11-20 01:07:54,333 | INFO     | sum of square deviations: 6308983841.919435
[2025-11-19 20:08:53] 2025-11-20 01:07:54,335 | INFO     | sum of deviations: 20405319172.146564
[2025-11-19 20:08:53] 2025-11-20 01:07:54,335 | INFO     | mean x: 1763592557.1062272
[2025-11-19 20:08:53] 2025-11-20 01:07:54,335 | INFO     | mean y: 3944055.4432234433
[2025-11-19 20:08:53] 2025-11-20 01:07:54,335 | INFO     | intersect: -5700091637.002956
[2025-11-19 20:08:53] 2025-11-20 01:07:54,335 | INFO     | chi2: 3.3354919761514585
[2025-11-19 20:08:53] 2025-11-20 01:07:54,336 | INFO     | current chi2=3.3354919761514585 (change=41.85652587133489 %)
[2025-11-19 20:08:53] 2025-11-20 01:07:54,336 | INFO     | sum of square deviations: 5968633731.861908
[2025-11-19 20:08:53] 2025-11-20 01:07:54,338 | INFO     | sum of deviations: 3144435380.4439697
[2025-11-19 20:08:53] 2025-11-20 01:07:54,338 | INFO     | mean x: 1763592709.608209
[2025-11-19 20:08:53] 2025-11-20 01:07:54,338 | INFO     | mean y: 3951772.0708955224
[2025-11-19 20:08:53] 2025-11-20 01:07:54,338 | INFO     | intersect: -925155886.7190813
[2025-11-19 20:08:53] 2025-11-20 01:07:54,338 | INFO     | chi2: 3.3024272500229923
[2025-11-19 20:08:53] 2025-11-20 01:07:54,338 | INFO     | current chi2=3.3024272500229923 (change=0.9912998251795171 %)
[2025-11-19 20:08:53] 2025-11-20 01:07:54,339 | INFO     | left removable region: 20
[2025-11-19 20:08:53] 2025-11-20 01:07:54,339 | INFO     | sum of square deviations: 4672599670.825939
[2025-11-19 20:08:53] 2025-11-20 01:07:54,340 | INFO     | sum of deviations: 110529418723.44537
[2025-11-19 20:08:53] 2025-11-20 01:07:54,341 | INFO     | mean x: 1763592679.1133604
[2025-11-19 20:08:53] 2025-11-20 01:07:54,341 | INFO     | mean y: 4021241.1983805667
[2025-11-19 20:08:53] 2025-11-20 01:07:54,341 | INFO     | intersect: -41713413895.475204
[2025-11-19 20:08:53] 2025-11-20 01:07:54,341 | INFO     | chi2: 0.012293157628924698
[2025-11-19 20:08:53] 2025-11-20 01:07:54,341 | INFO     | current memory leak: 23.65 B/s (using 247 data points, chi2=0.01)
[2025-11-19 20:08:53] 2025-11-20 01:07:54,342 | INFO     | could have reported an average CPU frequency of 2340 MHz (13 samples)
[2025-11-19 20:08:53] 2025-11-20 01:07:54,342 | INFO     | ..............................
[2025-11-19 20:08:53] 2025-11-20 01:07:54,342 | INFO     | . Timing measurements:
[2025-11-19 20:08:53] 2025-11-20 01:07:54,342 | INFO     | . get job = 0 s
[2025-11-19 20:08:53] 2025-11-20 01:07:54,342 | INFO     | . initial setup = 2 s
[2025-11-19 20:08:53] 2025-11-20 01:07:54,342 | INFO     | . payload setup = 13 s
[2025-11-19 20:08:53] 2025-11-20 01:07:54,342 | INFO     | . stage-in = 0 s
[2025-11-19 20:08:53] 2025-11-20 01:07:54,342 | INFO     | . payload execution = 16905 s
[2025-11-19 20:08:53] 2025-11-20 01:07:54,342 | INFO     | . stage-out = 2 s
[2025-11-19 20:08:53] 2025-11-20 01:07:54,343 | INFO     | . log creation = 0 s
[2025-11-19 20:08:53] 2025-11-20 01:07:54,343 | INFO     | ..............................
[2025-11-19 20:08:53] 2025-11-20 01:07:54,424 | INFO     | 
[2025-11-19 20:08:53] 2025-11-20 01:07:54,424 | INFO     | job summary report
[2025-11-19 20:08:53] 2025-11-20 01:07:54,424 | INFO     | --------------------------------------------------
[2025-11-19 20:08:53] 2025-11-20 01:07:54,424 | INFO     | PanDA job id: 6886208174
[2025-11-19 20:08:53] 2025-11-20 01:07:54,425 | INFO     | task id: 47450870
[2025-11-19 20:08:53] 2025-11-20 01:07:54,425 | INFO     | errors: (none)
[2025-11-19 20:08:53] 2025-11-20 01:07:54,425 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-19 20:08:53] 2025-11-20 01:07:54,425 | INFO     | pilot state: finished 
[2025-11-19 20:08:53] 2025-11-20 01:07:54,425 | INFO     | transexitcode: 0
[2025-11-19 20:08:53] 2025-11-20 01:07:54,425 | INFO     | exeerrorcode: 0
[2025-11-19 20:08:53] 2025-11-20 01:07:54,426 | INFO     | exeerrordiag: 
[2025-11-19 20:08:53] 2025-11-20 01:07:54,426 | INFO     | exitcode: 0
[2025-11-19 20:08:53] 2025-11-20 01:07:54,426 | INFO     | exitmsg: OK
[2025-11-19 20:08:53] 2025-11-20 01:07:54,426 | INFO     | cpuconsumptiontime: 184627 s
[2025-11-19 20:08:53] 2025-11-20 01:07:54,426 | INFO     | nevents: 1000
[2025-11-19 20:08:53] 2025-11-20 01:07:54,426 | INFO     | neventsw: 0
[2025-11-19 20:08:53] 2025-11-20 01:07:54,426 | INFO     | pid: 12001
[2025-11-19 20:08:53] 2025-11-20 01:07:54,426 | INFO     | pgrp: 12001
[2025-11-19 20:08:53] 2025-11-20 01:07:54,426 | INFO     | corecount: 12
[2025-11-19 20:08:53] 2025-11-20 01:07:54,426 | INFO     | event service: False
[2025-11-19 20:08:53] 2025-11-20 01:07:54,427 | INFO     | sizes: {0: 2297182, 1: 2297437, 6: 2297699, 12: 2297727, 16923: 2350024, 16924: 2350023, 16928: 2359229, 16930: 2359285, 16938: 2359531}
[2025-11-19 20:08:53] 2025-11-20 01:07:54,427 | INFO     | --------------------------------------------------
[2025-11-19 20:08:53] 2025-11-20 01:07:54,427 | INFO     | 
[2025-11-19 20:08:53] 2025-11-20 01:07:54,427 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-19 20:08:53] 2025-11-20 01:07:54,450 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-19 20:08:53] 2025-11-20 01:07:54,450 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-19 20:08:53] 2025-11-20 01:07:54,450 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-19 20:08:53] 2025-11-20 01:07:54,450 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-19 20:08:53] 2025-11-20 01:07:54,451 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-19 20:08:53] 2025-11-20 01:07:54,451 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-19 20:08:53] 2025-11-20 01:07:54,451 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-19 20:08:53] 2025-11-20 01:07:54,451 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-19 20:08:53] 2025-11-20 01:07:54,451 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-19 20:08:53] 2025-11-20 01:07:54,451 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-19 20:08:53] 2025-11-20 01:07:54,452 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-19 20:08:53] 2025-11-20 01:07:54,452 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-19 20:08:53] 2025-11-20 01:07:54,452 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-19 20:08:53] 2025-11-20 01:07:54,452 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-19 20:08:53] 2025-11-20 01:07:54,452 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-19 20:08:53] 2025-11-20 01:07:54,452 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-19 20:08:53] 2025-11-20 01:07:54,453 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-19 20:08:53] 2025-11-20 01:07:54,453 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-19 20:08:53] 2025-11-20 01:07:54,453 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-19 20:08:53] 2025-11-20 01:07:54,453 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-19 20:08:53] 2025-11-20 01:07:54,453 | INFO     | job 6886208174 has completed (purged errors)
[2025-11-19 20:08:53] 2025-11-20 01:07:54,454 | INFO     | overall cleanup function is called
[2025-11-19 20:08:53] 2025-11-20 01:07:55,470 | INFO     | --- collectZombieJob: --- 10, [12001]
[2025-11-19 20:08:53] 2025-11-20 01:07:55,470 | INFO     | zombie collector waiting for pid 12001
[2025-11-19 20:08:53] 2025-11-20 01:07:55,470 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-19 20:08:53] 2025-11-20 01:07:55,470 | INFO     | collected zombie processes
[2025-11-19 20:08:53] 2025-11-20 01:07:55,471 | INFO     | will attempt to kill all subprocesses of pid=12001
[2025-11-19 20:08:53] 2025-11-20 01:07:55,562 | INFO     | process IDs to be killed: [12001] (in reverse order)
[2025-11-19 20:08:53] 2025-11-20 01:07:55,614 | WARNING  | found no corresponding commands to process id(s)
[2025-11-19 20:08:53] 2025-11-20 01:07:55,614 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-19 20:08:53] 2025-11-20 01:07:55,617 | INFO     | did not find any defunct processes belonging to 12001
[2025-11-19 20:08:53] 2025-11-20 01:07:55,619 | INFO     | did not find any defunct processes belonging to 12001
[2025-11-19 20:08:53] 2025-11-20 01:07:55,621 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-19 20:08:53] 2025-11-20 01:07:55,621 | INFO     | ready for new job
[2025-11-19 20:08:53] 2025-11-20 01:07:55,621 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-19 20:08:53] 2025-11-20 01:07:55,623 | INFO     | ***************************************
[2025-11-19 20:08:53] 2025-11-20 01:07:55,623 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-19 20:08:53] 2025-11-20 01:07:55,623 | INFO     | ***************************************
[2025-11-19 20:08:53] 2025-11-20 01:07:55,623 | INFO     | 
[2025-11-19 20:08:53] 2025-11-20 01:07:55,624 | INFO     | architecture information:
[2025-11-19 20:08:53] 2025-11-20 01:07:55,624 | INFO     | executing command: cat /etc/os-release
[2025-11-19 20:08:53] 2025-11-20 01:07:55,639 | INFO     | cat /etc/os-release:
[2025-11-19 20:08:53] NAME="CentOS Linux"
[2025-11-19 20:08:53] VERSION="7 (Core)"
[2025-11-19 20:08:53] ID="centos"
[2025-11-19 20:08:53] ID_LIKE="rhel fedora"
[2025-11-19 20:08:53] VERSION_ID="7"
[2025-11-19 20:08:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-19 20:08:53] ANSI_COLOR="0;31"
[2025-11-19 20:08:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-19 20:08:53] HOME_URL="https://www.centos.org/"
[2025-11-19 20:08:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-19 20:08:53] 
[2025-11-19 20:08:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-19 20:08:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-19 20:08:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-19 20:08:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-19 20:08:53] 
[2025-11-19 20:08:53] 2025-11-20 01:07:55,639 | INFO     | ***************************************
[2025-11-19 20:08:53] 2025-11-20 01:07:56,142 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-19 20:08:53] 2025-11-20 01:07:56,158 | INFO     | sufficient remaining disk space (28671213568 B)
[2025-11-19 20:08:53] 2025-11-20 01:07:56,159 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-19 20:08:53] 2025-11-20 01:07:56,159 | INFO     | current server update state: UPDATING_FINAL
[2025-11-19 20:08:53] 2025-11-20 01:07:56,159 | INFO     | update_server=False
[2025-11-19 20:08:53] 2025-11-20 01:07:56,159 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-19 20:08:53] 2025-11-20 01:07:56,160 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-19 20:08:53] 2025-11-20 01:07:56,160 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-19 20:08:53] 2025-11-20 01:07:56,160 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-19 20:08:53] 2025-11-20 01:07:56,160 | INFO     | aborting loop
[2025-11-19 20:08:53] 2025-11-20 01:07:56,633 | INFO     | all payload control threads have been joined
[2025-11-19 20:08:53] 2025-11-20 01:07:57,065 | INFO     | all data control threads have been joined
[2025-11-19 20:08:53] 2025-11-20 01:07:57,165 | INFO     | [job] retrieve thread has finished
[2025-11-19 20:08:53] 2025-11-20 01:07:57,166 | INFO     | [job] queue monitor thread has finished
[2025-11-19 20:08:53] 2025-11-20 01:07:57,167 | INFO     | [job] job monitor thread has finished
[2025-11-19 20:08:53] 2025-11-20 01:07:57,271 | INFO     | [payload] execute_payloads thread has finished
[2025-11-19 20:08:53] 2025-11-20 01:07:57,444 | INFO     | [payload] validate_post thread has finished
[2025-11-19 20:08:53] 2025-11-20 01:07:57,518 | INFO     | all job control threads have been joined
[2025-11-19 20:08:53] 2025-11-20 01:07:57,638 | INFO     | [payload] control thread has finished
[2025-11-19 20:08:53] 2025-11-20 01:07:57,798 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-19 20:08:53] 2025-11-20 01:07:57,920 | INFO     | [data] copytool_in thread has finished
[2025-11-19 20:08:53] 2025-11-20 01:07:58,070 | INFO     | [data] control thread has finished
[2025-11-19 20:08:53] 2025-11-20 01:07:58,165 | INFO     | [data] copytool_out thread has finished
[2025-11-19 20:08:53] 2025-11-20 01:07:58,250 | INFO     | [job] validate thread has finished
[2025-11-19 20:08:53] 2025-11-20 01:07:58,371 | INFO     | [job] create_data_payload thread has finished
[2025-11-19 20:08:53] 2025-11-20 01:07:58,475 | INFO     | [payload] validate_pre thread has finished
[2025-11-19 20:08:53] 2025-11-20 01:07:58,524 | INFO     | [job] control thread has finished
[2025-11-19 20:08:53] 2025-11-20 01:07:58,545 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-19 20:08:53] 2025-11-20 01:07:58,578 | INFO     | [payload] failed_post thread has finished
[2025-11-19 20:08:53] 2025-11-20 01:08:01,804 | INFO     | [data] queue_monitor thread has finished
[2025-11-19 20:08:53] 2025-11-20 01:08:25,686 | INFO     | PID=4898 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-19 20:08:53] 2025-11-20 01:08:25,686 | INFO     | found 0 job(s) in 20 queues
[2025-11-19 20:08:53] 2025-11-20 01:08:25,687 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-19 20:08:53] 2025-11-20 01:08:25,687 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-19 20:08:53] 2025-11-20 01:08:48,345 | INFO     | [monitor] cgroup control has ended
[2025-11-19 20:08:53] 2025-11-20 01:08:48,357 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140564842424128)>', '<ExcThread(monitor, started 140563709933312)>']
[2025-11-19 20:08:53] 2025-11-20 01:08:48,791 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-19 20:08:53] 2025-11-20 01:08:48,792 | INFO     | [monitor] control thread has ended
[2025-11-19 20:08:53] 2025-11-20 01:08:53,375 | INFO     | all workflow threads have been joined
[2025-11-19 20:08:53] 2025-11-20 01:08:53,376 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-19 20:08:53] 2025-11-20 01:08:53,381 | INFO     | traces error code: 0
[2025-11-19 20:08:53] 2025-11-20 01:08:53,381 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-19 20:08:53] 2025-11-20 01:08:53,473 [wrapper] ==== pilot stdout END ====
[2025-11-19 20:08:53] 2025-11-20 01:08:53,478 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-19 20:08:53] 2025-11-20 01:08:53,481 [wrapper] pilotpid: 4898
[2025-11-19 20:08:53] 2025-11-20 01:08:53,485 [wrapper] Pilot exit status: 0
[2025-11-19 20:08:53] 2025-11-20 01:08:53,499 [wrapper] pandaids: 6886208174
[2025-11-19 20:08:53] 2025-11-20 01:08:53,548 [wrapper] cleanup supervisor_pilot 29243 4899
[2025-11-19 20:08:53] 2025-11-20 01:08:53,552 [wrapper] Test setup, not cleaning
[2025-11-19 20:08:53] 2025-11-20 01:08:53,556 [wrapper] apfmon messages muted
[2025-11-19 20:08:53] 2025-11-20 01:08:53,560 [wrapper] ==== wrapper stdout END ====
[2025-11-19 20:08:53] 2025-11-20 01:08:53,564 [wrapper] ==== wrapper stderr END ====
[2025-11-19 20:08:53]  *** Error codes and diagnostics ***
[2025-11-19 20:08:53]     "exeErrorCode": 0,
[2025-11-19 20:08:53]     "exeErrorDiag": "",
[2025-11-19 20:08:53]     "pilotErrorCode": 0,
[2025-11-19 20:08:53]     "pilotErrorDiag": "",
[2025-11-19 20:08:53]  *** Listing of results directory ***
[2025-11-19 20:08:53] total 922416
[2025-11-19 20:08:53] -rw-r--r-- 1 boincer umatlas    576529 Nov 14 09:59 pilot3.tar.gz
[2025-11-19 20:08:53] -rwx------ 1 boincer umatlas     36292 Nov 14 10:03 runpilot2-wrapper.sh
[2025-11-19 20:08:53] -rw-r--r-- 1 boincer umatlas      5112 Nov 14 10:03 queuedata.json
[2025-11-19 20:08:53] -rw-r--r-- 1 boincer umatlas       100 Nov 19 15:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-19 20:08:53] -rwxr-xr-x 1 boincer umatlas      7986 Nov 19 15:25 run_atlas
[2025-11-19 20:08:53] -rw-r--r-- 1 boincer umatlas       105 Nov 19 15:25 job.xml
[2025-11-19 20:08:53] -rw-r--r-- 2 boincer umatlas 380527935 Nov 19 15:25 EVNT.14545720._000247.pool.root.1
[2025-11-19 20:08:53] -rw-r--r-- 2 boincer umatlas     15120 Nov 19 15:25 start_atlas.sh
[2025-11-19 20:08:53] drwxrwx--x 2 boincer umatlas      4096 Nov 19 15:25 shared
[2025-11-19 20:08:53] -rw-r--r-- 2 boincer umatlas    590124 Nov 19 15:25 input.tar.gz
[2025-11-19 20:08:53] -rw-r--r-- 1 boincer umatlas         0 Nov 19 15:25 boinc_lockfile
[2025-11-19 20:08:53] -rw-r--r-- 1 boincer umatlas      2930 Nov 19 15:25 pandaJob.out
[2025-11-19 20:08:53] -rw------- 1 boincer umatlas    989443 Nov 19 15:25 agis_schedconf.cvmfs.json
[2025-11-19 20:08:53] drwx------ 5 boincer umatlas      4096 Nov 19 15:25 pilot3
[2025-11-19 20:08:53] -rw-r--r-- 1 boincer umatlas       532 Nov 19 20:00 boinc_task_state.xml
[2025-11-19 20:08:53] -rw-r--r-- 1 boincer umatlas      5955 Nov 19 20:03 init_data.xml
[2025-11-19 20:08:53] -rw------- 1 boincer umatlas 551052436 Nov 19 20:07 HITS.47450870._002289.pool.root.1
[2025-11-19 20:08:53] -rw------- 1 boincer umatlas        95 Nov 19 20:07 pilot_heartbeat.json
[2025-11-19 20:08:53] -rw------- 1 boincer umatlas      1065 Nov 19 20:07 memory_monitor_summary.json
[2025-11-19 20:08:53] -rw------- 1 boincer umatlas   1525063 Nov 19 20:07 agis_ddmendpoints.agis.ALL.json
[2025-11-19 20:08:53] -rw------- 1 boincer umatlas   2121264 Nov 19 20:07 log.47450870._002289.job.log.tgz.1
[2025-11-19 20:08:53] -rw------- 1 boincer umatlas     28137 Nov 19 20:07 heartbeat.json
[2025-11-19 20:08:53] -rw-r--r-- 1 boincer umatlas      8192 Nov 19 20:08 boinc_mmap_file
[2025-11-19 20:08:53] -rw-r--r-- 1 boincer umatlas        29 Nov 19 20:08 wrapper_checkpoint.txt
[2025-11-19 20:08:53] -rw------- 1 boincer umatlas      4745 Nov 19 20:08 pilotlog.txt
[2025-11-19 20:08:53] -rw------- 1 boincer umatlas   2390274 Nov 19 20:08 log.47450870._002289.job.log.1
[2025-11-19 20:08:53] -rw------- 1 boincer umatlas       353 Nov 19 20:08 output.list
[2025-11-19 20:08:53] -rw-r--r-- 1 boincer umatlas       620 Nov 19 20:08 runtime_log
[2025-11-19 20:08:53] -rw------- 1 boincer umatlas   4546560 Nov 19 20:08 result.tar.gz
[2025-11-19 20:08:53] -rw-r--r-- 1 boincer umatlas      8706 Nov 19 20:08 runtime_log.err
[2025-11-19 20:08:53] -rw------- 1 boincer umatlas       670 Nov 19 20:08 ICoLDmaVAe8n9Rq4apOajLDm4fhM0noT9bVof3QYDmSxqMDmdzDfYm.diag
[2025-11-19 20:08:53] -rw-r--r-- 1 boincer umatlas     21353 Nov 19 20:08 stderr.txt
[2025-11-19 20:08:53] HITS file was successfully produced:
[2025-11-19 20:08:53] -rw------- 1 boincer umatlas 551052436 Nov 19 20:07 shared/HITS.pool.root.1
[2025-11-19 20:08:53]  *** Contents of shared directory: ***
[2025-11-19 20:08:53] total 914792
[2025-11-19 20:08:53] -rw-r--r-- 2 boincer umatlas 380527935 Nov 19 15:25 ATLAS.root_0
[2025-11-19 20:08:53] -rw-r--r-- 2 boincer umatlas     15120 Nov 19 15:25 start_atlas.sh
[2025-11-19 20:08:53] -rw-r--r-- 2 boincer umatlas    590124 Nov 19 15:25 input.tar.gz
[2025-11-19 20:08:53] -rw------- 1 boincer umatlas 551052436 Nov 19 20:07 HITS.pool.root.1
[2025-11-19 20:08:53] -rw------- 1 boincer umatlas   4546560 Nov 19 20:08 result.tar.gz
20:08:54 (1045): run_atlas exited; CPU time 179625.296929
20:08:54 (1045): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN