Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:22:32 (4422): wrapper (7.7.26015): starting
15:22:33 (4422): wrapper: running run_atlas (--nthreads 4)
[2025-11-19 15:22:33] Arguments: --nthreads 4
[2025-11-19 15:22:33] Threads: 4
[2025-11-19 15:22:33] Checking for CVMFS
[2025-11-19 15:22:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 15:22:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 15:22:33] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 15:22:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 15:22:33] 2.11.2.0 2433 93980 74896 153056 2 80 16178923 20275200 1 130560 0 33289005 99.947 3889129 43105 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-19 15:22:33] CVMFS is ok
[2025-11-19 15:22:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-19 15:22:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-19 15:22:33] Further information can be found at the LHC@home message board.
[2025-11-19 15:22:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 15:22:33] Checking for apptainer binary...
[2025-11-19 15:22:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 15:22:33] Running /usr/bin/apptainer --version
[2025-11-19 15:22:33] apptainer version 1.3.2-1.el7
[2025-11-19 15:22:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 15:22:33] c-205-33.aglt2.org
[2025-11-19 15:22:33] apptainer works
[2025-11-19 15:22:33] Set ATHENA_PROC_NUMBER=4
[2025-11-19 15:22:33] Set ATHENA_CORE_NUMBER=4
[2025-11-19 15:22:33] Starting ATLAS job with PandaID=6891584710
[2025-11-19 15:22:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 00:58:06]  *** The last 200 lines of the pilot log: ***
[2025-11-20 00:58:06] 2025-11-20 05:57:30,983 | INFO     | time since job start (34489s) is within the limit (172800.0s)
[2025-11-20 00:58:06] 2025-11-20 05:57:32,218 | INFO     | monitor loop #2570: job 0:6891584710 is in state 'finished'
[2025-11-20 00:58:06] 2025-11-20 05:57:32,218 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 00:58:06] 2025-11-20 05:57:32,987 | INFO     | time since job start (34491s) is within the limit (172800.0s)
[2025-11-20 00:58:06] 2025-11-20 05:57:33,349 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-20 00:58:06] 2025-11-20 05:57:33,350 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3605.9715
[2025-11-20 00:58:06] 2025-11-20 05:57:33,351 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6891584710/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 00:58:06] 2025-11-20 05:57:33,351 | INFO     | extracted standard info from prmon json
[2025-11-20 00:58:06] 2025-11-20 05:57:33,351 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 00:58:06] 2025-11-20 05:57:33,351 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 00:58:06] 2025-11-20 05:57:33,355 | INFO     | fitting pss+swap vs Time
[2025-11-20 00:58:06] 2025-11-20 05:57:33,355 | INFO     | sum of square deviations: 55926990529.93628
[2025-11-20 00:58:06] 2025-11-20 05:57:33,358 | INFO     | sum of deviations: 180957888816.42838
[2025-11-20 00:58:06] 2025-11-20 05:57:33,358 | INFO     | mean x: 1763600983.0106194
[2025-11-20 00:58:06] 2025-11-20 05:57:33,359 | INFO     | mean y: 2495595.2619469026
[2025-11-20 00:58:06] 2025-11-20 05:57:33,359 | INFO     | intersect: -5703828088.1008
[2025-11-20 00:58:06] 2025-11-20 05:57:33,359 | INFO     | chi2: 1.8402489783732998
[2025-11-20 00:58:06] 2025-11-20 05:57:33,359 | INFO     | sum of square deviations: 54455299649.935776
[2025-11-20 00:58:06] 2025-11-20 05:57:33,362 | INFO     | sum of deviations: 226645210372.24643
[2025-11-20 00:58:06] 2025-11-20 05:57:33,362 | INFO     | mean x: 1763600830.5107143
[2025-11-20 00:58:06] 2025-11-20 05:57:33,362 | INFO     | mean y: 2500302.2089285715
[2025-11-20 00:58:06] 2025-11-20 05:57:33,362 | INFO     | intersect: -7337679327.9336605
[2025-11-20 00:58:06] 2025-11-20 05:57:33,363 | INFO     | chi2: 1.2483410078410213
[2025-11-20 00:58:06] 2025-11-20 05:57:33,363 | INFO     | current chi2=1.2483410078410213 (change=32.16455911609849 %)
[2025-11-20 00:58:06] 2025-11-20 05:57:33,363 | INFO     | sum of square deviations: 53009655769.93542
[2025-11-20 00:58:06] 2025-11-20 05:57:33,366 | INFO     | sum of deviations: 222541576713.9569
[2025-11-20 00:58:06] 2025-11-20 05:57:33,366 | INFO     | mean x: 1763600678.0108109
[2025-11-20 00:58:06] 2025-11-20 05:57:33,366 | INFO     | mean y: 2499869.3405405404
[2025-11-20 00:58:06] 2025-11-20 05:57:33,366 | INFO     | intersect: -7401330053.300125
[2025-11-20 00:58:06] 2025-11-20 05:57:33,366 | INFO     | chi2: 1.2483291233396483
[2025-11-20 00:58:06] 2025-11-20 05:57:33,366 | INFO     | current chi2=1.2483291233396483 (change=0.0009520236296306734 %)
[2025-11-20 00:58:06] 2025-11-20 05:57:33,366 | INFO     | right removable region: 554
[2025-11-20 00:58:06] 2025-11-20 05:57:33,367 | INFO     | sum of square deviations: 54455295989.93577
[2025-11-20 00:58:06] 2025-11-20 05:57:33,370 | INFO     | sum of deviations: 111519804159.19627
[2025-11-20 00:58:06] 2025-11-20 05:57:33,370 | INFO     | mean x: 1763601135.5107143
[2025-11-20 00:58:06] 2025-11-20 05:57:33,370 | INFO     | mean y: 2502754.3839285714
[2025-11-20 00:58:06] 2025-11-20 05:57:33,370 | INFO     | intersect: -3609202033.4009004
[2025-11-20 00:58:06] 2025-11-20 05:57:33,370 | INFO     | chi2: 0.6457953749356413
[2025-11-20 00:58:06] 2025-11-20 05:57:33,370 | INFO     | current chi2=0.6457953749356413 (change=64.9071738376132 %)
[2025-11-20 00:58:06] 2025-11-20 05:57:33,371 | INFO     | sum of square deviations: 53009648449.93542
[2025-11-20 00:58:06] 2025-11-20 05:57:33,374 | INFO     | sum of deviations: 106158737841.30818
[2025-11-20 00:58:06] 2025-11-20 05:57:33,374 | INFO     | mean x: 1763601288.0108109
[2025-11-20 00:58:06] 2025-11-20 05:57:33,374 | INFO     | mean y: 2503319.448648649
[2025-11-20 00:58:06] 2025-11-20 05:57:33,374 | INFO     | intersect: -3529338378.5273967
[2025-11-20 00:58:06] 2025-11-20 05:57:33,374 | INFO     | chi2: 0.6452500439911755
[2025-11-20 00:58:06] 2025-11-20 05:57:33,374 | INFO     | current chi2=0.6452500439911755 (change=0.08444330288370307 %)
[2025-11-20 00:58:06] 2025-11-20 05:57:33,374 | INFO     | left removable region: 20
[2025-11-20 00:58:06] 2025-11-20 05:57:33,374 | INFO     | sum of square deviations: 47217121603.43265
[2025-11-20 00:58:06] 2025-11-20 05:57:33,377 | INFO     | sum of deviations: 143367891314.1404
[2025-11-20 00:58:06] 2025-11-20 05:57:33,377 | INFO     | mean x: 1763601257.511236
[2025-11-20 00:58:06] 2025-11-20 05:57:33,377 | INFO     | mean y: 2508229.893258427
[2025-11-20 00:58:06] 2025-11-20 05:57:33,377 | INFO     | intersect: -5352409325.902237
[2025-11-20 00:58:06] 2025-11-20 05:57:33,377 | INFO     | chi2: 0.04889603515332772
[2025-11-20 00:58:06] 2025-11-20 05:57:33,378 | INFO     | current memory leak: 3.04 B/s (using 534 data points, chi2=0.05)
[2025-11-20 00:58:06] 2025-11-20 05:57:33,378 | INFO     | could have reported an average CPU frequency of 3158 MHz (22 samples)
[2025-11-20 00:58:06] 2025-11-20 05:57:33,378 | INFO     | ..............................
[2025-11-20 00:58:06] 2025-11-20 05:57:33,378 | INFO     | . Timing measurements:
[2025-11-20 00:58:06] 2025-11-20 05:57:33,378 | INFO     | . get job = 0 s
[2025-11-20 00:58:06] 2025-11-20 05:57:33,378 | INFO     | . initial setup = 2 s
[2025-11-20 00:58:06] 2025-11-20 05:57:33,378 | INFO     | . payload setup = 3 s
[2025-11-20 00:58:06] 2025-11-20 05:57:33,378 | INFO     | . stage-in = 0 s
[2025-11-20 00:58:06] 2025-11-20 05:57:33,378 | INFO     | . payload execution = 34460 s
[2025-11-20 00:58:06] 2025-11-20 05:57:33,378 | INFO     | . stage-out = 2 s
[2025-11-20 00:58:06] 2025-11-20 05:57:33,378 | INFO     | . log creation = 0 s
[2025-11-20 00:58:06] 2025-11-20 05:57:33,378 | INFO     | ..............................
[2025-11-20 00:58:06] 2025-11-20 05:57:33,413 | INFO     | 
[2025-11-20 00:58:06] 2025-11-20 05:57:33,413 | INFO     | job summary report
[2025-11-20 00:58:06] 2025-11-20 05:57:33,413 | INFO     | --------------------------------------------------
[2025-11-20 00:58:06] 2025-11-20 05:57:33,413 | INFO     | PanDA job id: 6891584710
[2025-11-20 00:58:06] 2025-11-20 05:57:33,413 | INFO     | task id: 47493068
[2025-11-20 00:58:06] 2025-11-20 05:57:33,413 | INFO     | errors: (none)
[2025-11-20 00:58:06] 2025-11-20 05:57:33,413 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 00:58:06] 2025-11-20 05:57:33,413 | INFO     | pilot state: finished 
[2025-11-20 00:58:06] 2025-11-20 05:57:33,413 | INFO     | transexitcode: 0
[2025-11-20 00:58:06] 2025-11-20 05:57:33,413 | INFO     | exeerrorcode: 0
[2025-11-20 00:58:06] 2025-11-20 05:57:33,413 | INFO     | exeerrordiag: 
[2025-11-20 00:58:06] 2025-11-20 05:57:33,413 | INFO     | exitcode: 0
[2025-11-20 00:58:06] 2025-11-20 05:57:33,413 | INFO     | exitmsg: OK
[2025-11-20 00:58:06] 2025-11-20 05:57:33,413 | INFO     | cpuconsumptiontime: 135518 s
[2025-11-20 00:58:06] 2025-11-20 05:57:33,413 | INFO     | nevents: 1000
[2025-11-20 00:58:06] 2025-11-20 05:57:33,413 | INFO     | neventsw: 0
[2025-11-20 00:58:06] 2025-11-20 05:57:33,413 | INFO     | pid: 14430
[2025-11-20 00:58:06] 2025-11-20 05:57:33,413 | INFO     | pgrp: 14430
[2025-11-20 00:58:06] 2025-11-20 05:57:33,413 | INFO     | corecount: 4
[2025-11-20 00:58:06] 2025-11-20 05:57:33,413 | INFO     | event service: False
[2025-11-20 00:58:06] 2025-11-20 05:57:33,413 | INFO     | sizes: {0: 2297200, 2: 2297462, 11: 2297490, 34467: 2338868, 34470: 2347862, 34473: 2347918, 34479: 2348292}
[2025-11-20 00:58:06] 2025-11-20 05:57:33,413 | INFO     | --------------------------------------------------
[2025-11-20 00:58:06] 2025-11-20 05:57:33,413 | INFO     | 
[2025-11-20 00:58:06] 2025-11-20 05:57:33,414 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-20 00:58:06] 2025-11-20 05:57:33,425 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 00:58:06] 2025-11-20 05:57:33,425 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 00:58:06] 2025-11-20 05:57:33,425 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 00:58:06] 2025-11-20 05:57:33,425 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 00:58:06] 2025-11-20 05:57:33,425 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 00:58:06] 2025-11-20 05:57:33,425 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 00:58:06] 2025-11-20 05:57:33,425 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 00:58:06] 2025-11-20 05:57:33,425 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 00:58:06] 2025-11-20 05:57:33,425 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 00:58:06] 2025-11-20 05:57:33,426 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 00:58:06] 2025-11-20 05:57:33,426 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 00:58:06] 2025-11-20 05:57:33,426 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 00:58:06] 2025-11-20 05:57:33,426 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 00:58:06] 2025-11-20 05:57:33,426 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 00:58:06] 2025-11-20 05:57:33,426 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 00:58:06] 2025-11-20 05:57:33,426 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 00:58:06] 2025-11-20 05:57:33,426 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 00:58:06] 2025-11-20 05:57:33,426 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 00:58:06] 2025-11-20 05:57:33,426 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 00:58:06] 2025-11-20 05:57:33,426 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 00:58:06] 2025-11-20 05:57:33,426 | INFO     | job 6891584710 has completed (purged errors)
[2025-11-20 00:58:06] 2025-11-20 05:57:33,426 | INFO     | overall cleanup function is called
[2025-11-20 00:58:06] 2025-11-20 05:57:34,432 | INFO     | --- collectZombieJob: --- 10, [14430]
[2025-11-20 00:58:06] 2025-11-20 05:57:34,432 | INFO     | zombie collector waiting for pid 14430
[2025-11-20 00:58:06] 2025-11-20 05:57:34,433 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 00:58:06] 2025-11-20 05:57:34,433 | INFO     | collected zombie processes
[2025-11-20 00:58:06] 2025-11-20 05:57:34,433 | INFO     | will attempt to kill all subprocesses of pid=14430
[2025-11-20 00:58:06] 2025-11-20 05:57:34,466 | INFO     | process IDs to be killed: [14430] (in reverse order)
[2025-11-20 00:58:06] 2025-11-20 05:57:34,488 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 00:58:06] 2025-11-20 05:57:34,489 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 00:58:06] 2025-11-20 05:57:34,489 | INFO     | did not find any defunct processes belonging to 14430
[2025-11-20 00:58:06] 2025-11-20 05:57:34,490 | INFO     | did not find any defunct processes belonging to 14430
[2025-11-20 00:58:06] 2025-11-20 05:57:34,491 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 00:58:06] 2025-11-20 05:57:34,491 | INFO     | ready for new job
[2025-11-20 00:58:06] 2025-11-20 05:57:34,491 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 00:58:06] 2025-11-20 05:57:34,493 | INFO     | ***************************************
[2025-11-20 00:58:06] 2025-11-20 05:57:34,493 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 00:58:06] 2025-11-20 05:57:34,493 | INFO     | ***************************************
[2025-11-20 00:58:06] 2025-11-20 05:57:34,493 | INFO     | 
[2025-11-20 00:58:06] 2025-11-20 05:57:34,493 | INFO     | architecture information:
[2025-11-20 00:58:06] 2025-11-20 05:57:34,494 | INFO     | executing command: cat /etc/os-release
[2025-11-20 00:58:06] 2025-11-20 05:57:34,501 | INFO     | cat /etc/os-release:
[2025-11-20 00:58:06] NAME="CentOS Linux"
[2025-11-20 00:58:06] VERSION="7 (Core)"
[2025-11-20 00:58:06] ID="centos"
[2025-11-20 00:58:06] ID_LIKE="rhel fedora"
[2025-11-20 00:58:06] VERSION_ID="7"
[2025-11-20 00:58:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 00:58:06] ANSI_COLOR="0;31"
[2025-11-20 00:58:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 00:58:06] HOME_URL="https://www.centos.org/"
[2025-11-20 00:58:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 00:58:06] 
[2025-11-20 00:58:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 00:58:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 00:58:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 00:58:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 00:58:06] 
[2025-11-20 00:58:06] 2025-11-20 05:57:34,501 | INFO     | ***************************************
[2025-11-20 00:58:06] 2025-11-20 05:57:35,004 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-20 00:58:06] 2025-11-20 05:57:35,028 | INFO     | sufficient remaining disk space (17480810496 B)
[2025-11-20 00:58:06] 2025-11-20 05:57:35,029 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 00:58:06] 2025-11-20 05:57:35,029 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 00:58:06] 2025-11-20 05:57:35,029 | INFO     | update_server=False
[2025-11-20 00:58:06] 2025-11-20 05:57:35,030 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 00:58:06] 2025-11-20 05:57:35,030 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 00:58:06] 2025-11-20 05:57:35,030 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 00:58:06] 2025-11-20 05:57:35,100 | INFO     | all data control threads have been joined
[2025-11-20 00:58:06] 2025-11-20 05:57:35,451 | INFO     | all payload control threads have been joined
[2025-11-20 00:58:06] 2025-11-20 05:57:35,736 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 00:58:06] 2025-11-20 05:57:35,736 | INFO     | aborting loop
[2025-11-20 00:58:06] 2025-11-20 05:57:35,754 | INFO     | all job control threads have been joined
[2025-11-20 00:58:06] 2025-11-20 05:57:36,032 | INFO     | [job] queue monitor thread has finished
[2025-11-20 00:58:06] 2025-11-20 05:57:36,034 | INFO     | [job] retrieve thread has finished
[2025-11-20 00:58:06] 2025-11-20 05:57:36,096 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 00:58:06] 2025-11-20 05:57:36,101 | INFO     | [data] control thread has finished
[2025-11-20 00:58:06] 2025-11-20 05:57:36,112 | INFO     | [data] copytool_in thread has finished
[2025-11-20 00:58:06] 2025-11-20 05:57:36,456 | INFO     | [payload] control thread has finished
[2025-11-20 00:58:06] 2025-11-20 05:57:36,623 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 00:58:06] 2025-11-20 05:57:36,742 | INFO     | [job] job monitor thread has finished
[2025-11-20 00:58:06] 2025-11-20 05:57:36,759 | INFO     | [job] control thread has finished
[2025-11-20 00:58:06] 2025-11-20 05:57:36,820 | INFO     | [job] validate thread has finished
[2025-11-20 00:58:06] 2025-11-20 05:57:37,036 | INFO     | [data] copytool_out thread has finished
[2025-11-20 00:58:06] 2025-11-20 05:57:37,190 | INFO     | [payload] validate_post thread has finished
[2025-11-20 00:58:06] 2025-11-20 05:57:37,287 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 00:58:06] 2025-11-20 05:57:37,439 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 00:58:06] 2025-11-20 05:57:37,541 | INFO     | [payload] failed_post thread has finished
[2025-11-20 00:58:06] 2025-11-20 05:57:38,191 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 00:58:06] 2025-11-20 05:57:38,750 | INFO     | [monitor] cgroup control has ended
[2025-11-20 00:58:06] 2025-11-20 05:57:42,197 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 00:58:06] 2025-11-20 05:57:42,660 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140220513294144)>', '<ExcThread(monitor, started 140219919615744)>']
[2025-11-20 00:58:06] 2025-11-20 05:57:47,695 | INFO     | all workflow threads have been joined
[2025-11-20 00:58:06] 2025-11-20 05:57:47,708 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 00:58:06] 2025-11-20 05:57:47,708 | INFO     | traces error code: 0
[2025-11-20 00:58:06] 2025-11-20 05:57:47,709 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 00:58:06] 2025-11-20 05:58:06,116 | INFO     | PID=8082 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-20 00:58:06] 2025-11-20 05:58:06,116 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 00:58:06] 2025-11-20 05:58:06,116 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 00:58:06] 2025-11-20 05:58:06,116 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 00:58:06] 2025-11-20 05:58:06,117 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 00:58:06] 2025-11-20 05:58:06,117 | INFO     | [monitor] control thread has ended
[2025-11-20 00:58:06] 2025-11-20 05:58:06,176 [wrapper] ==== pilot stdout END ====
[2025-11-20 00:58:06] 2025-11-20 05:58:06,179 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 00:58:06] 2025-11-20 05:58:06,181 [wrapper] pilotpid: 8082
[2025-11-20 00:58:06] 2025-11-20 05:58:06,183 [wrapper] Pilot exit status: 0
[2025-11-20 00:58:06] 2025-11-20 05:58:06,189 [wrapper] pandaids: 6891584710
[2025-11-20 00:58:06] 2025-11-20 05:58:06,203 [wrapper] cleanup supervisor_pilot  2468 8083
[2025-11-20 00:58:06] 2025-11-20 05:58:06,205 [wrapper] Test setup, not cleaning
[2025-11-20 00:58:06] 2025-11-20 05:58:06,207 [wrapper] apfmon messages muted
[2025-11-20 00:58:06] 2025-11-20 05:58:06,209 [wrapper] ==== wrapper stdout END ====
[2025-11-20 00:58:06] 2025-11-20 05:58:06,210 [wrapper] ==== wrapper stderr END ====
[2025-11-20 00:58:06]  *** Error codes and diagnostics ***
[2025-11-20 00:58:06]     "exeErrorCode": 0,
[2025-11-20 00:58:06]     "exeErrorDiag": "",
[2025-11-20 00:58:06]     "pilotErrorCode": 0,
[2025-11-20 00:58:06]     "pilotErrorDiag": "",
[2025-11-20 00:58:06]  *** Listing of results directory ***
[2025-11-20 00:58:06] total 1301316
[2025-11-20 00:58:06] -rwx------ 1 boincer umatlas     36292 Nov 18 12:24 runpilot2-wrapper.sh
[2025-11-20 00:58:06] -rw-r--r-- 1 boincer umatlas      5112 Nov 18 12:24 queuedata.json
[2025-11-20 00:58:06] -rw-r--r-- 1 boincer umatlas    576529 Nov 18 12:24 pilot3.tar.gz
[2025-11-20 00:58:06] -rw-r--r-- 1 boincer umatlas       100 Nov 19 15:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 00:58:06] -rwxr-xr-x 1 boincer umatlas      7986 Nov 19 15:22 run_atlas
[2025-11-20 00:58:06] -rw-r--r-- 1 boincer umatlas       105 Nov 19 15:22 job.xml
[2025-11-20 00:58:06] -rw-r--r-- 2 boincer umatlas 409690488 Nov 19 15:22 EVNT.47493065._000468.pool.root.1
[2025-11-20 00:58:06] -rw-r--r-- 2 boincer umatlas     15120 Nov 19 15:22 start_atlas.sh
[2025-11-20 00:58:06] drwxrwx--x 2 boincer umatlas      4096 Nov 19 15:22 shared
[2025-11-20 00:58:06] -rw-r--r-- 2 boincer umatlas    590089 Nov 19 15:22 input.tar.gz
[2025-11-20 00:58:06] -rw-r--r-- 1 boincer umatlas         0 Nov 19 15:22 boinc_lockfile
[2025-11-20 00:58:06] -rw-r--r-- 1 boincer umatlas      2773 Nov 19 15:22 pandaJob.out
[2025-11-20 00:58:06] -rw------- 1 boincer umatlas    989443 Nov 19 15:22 agis_schedconf.cvmfs.json
[2025-11-20 00:58:06] drwx------ 5 boincer umatlas      4096 Nov 19 15:22 pilot3
[2025-11-20 00:58:06] -rw-r--r-- 1 boincer umatlas       533 Nov 20 00:54 boinc_task_state.xml
[2025-11-20 00:58:06] -rw-r--r-- 1 boincer umatlas      6241 Nov 20 00:55 init_data.xml
[2025-11-20 00:58:06] -rw------- 1 boincer umatlas 906621647 Nov 20 00:56 HITS.47493068._004674.pool.root.1
[2025-11-20 00:58:06] -rw------- 1 boincer umatlas      1053 Nov 20 00:57 memory_monitor_summary.json
[2025-11-20 00:58:06] -rw------- 1 boincer umatlas   1525063 Nov 20 00:57 agis_ddmendpoints.agis.ALL.json
[2025-11-20 00:58:06] -rw------- 1 boincer umatlas   1378434 Nov 20 00:57 log.47493068._004674.job.log.tgz.1
[2025-11-20 00:58:06] -rw------- 1 boincer umatlas      8636 Nov 20 00:57 heartbeat.json
[2025-11-20 00:58:06] -rw-r--r-- 1 boincer umatlas      8192 Nov 20 00:57 boinc_mmap_file
[2025-11-20 00:58:06] -rw-r--r-- 1 boincer umatlas        29 Nov 20 00:57 wrapper_checkpoint.txt
[2025-11-20 00:58:06] -rw------- 1 boincer umatlas       744 Nov 20 00:58 pilotlog.txt
[2025-11-20 00:58:06] -rw------- 1 boincer umatlas        95 Nov 20 00:58 pilot_heartbeat.json
[2025-11-20 00:58:06] -rw------- 1 boincer umatlas   4781130 Nov 20 00:58 log.47493068._004674.job.log.1
[2025-11-20 00:58:06] -rw------- 1 boincer umatlas       353 Nov 20 00:58 output.list
[2025-11-20 00:58:06] -rw-r--r-- 1 boincer umatlas       620 Nov 20 00:58 runtime_log
[2025-11-20 00:58:06] -rw------- 1 boincer umatlas   6174720 Nov 20 00:58 result.tar.gz
[2025-11-20 00:58:06] -rw------- 1 boincer umatlas       665 Nov 20 00:58 uzLMDmTcef8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmI1FKDmAZW3Co.diag
[2025-11-20 00:58:06] -rw-r--r-- 1 boincer umatlas      8704 Nov 20 00:58 runtime_log.err
[2025-11-20 00:58:06] -rw-r--r-- 1 boincer umatlas     21307 Nov 20 00:58 stderr.txt
[2025-11-20 00:58:06] HITS file was successfully produced:
[2025-11-20 00:58:06] -rw------- 1 boincer umatlas 906621647 Nov 20 00:56 shared/HITS.pool.root.1
[2025-11-20 00:58:06]  *** Contents of shared directory: ***
[2025-11-20 00:58:06] total 1292100
[2025-11-20 00:58:06] -rw-r--r-- 2 boincer umatlas 409690488 Nov 19 15:22 ATLAS.root_0
[2025-11-20 00:58:06] -rw-r--r-- 2 boincer umatlas     15120 Nov 19 15:22 start_atlas.sh
[2025-11-20 00:58:06] -rw-r--r-- 2 boincer umatlas    590089 Nov 19 15:22 input.tar.gz
[2025-11-20 00:58:06] -rw------- 1 boincer umatlas 906621647 Nov 20 00:56 HITS.pool.root.1
[2025-11-20 00:58:06] -rw------- 1 boincer umatlas   6174720 Nov 20 00:58 result.tar.gz
00:58:07 (4422): run_atlas exited; CPU time 135513.448674
00:58:07 (4422): called boinc_finish(0)

</stderr_txt>
]]>

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