Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:04:27 (3481867): wrapper (7.7.26015): starting
20:04:27 (3481867): wrapper: running run_atlas (--nthreads 9)
[2025-11-20 20:04:27] Arguments: --nthreads 9
[2025-11-20 20:04:27] Threads: 9
[2025-11-20 20:04:27] Checking for CVMFS
[2025-11-20 20:04:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 20:04:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 20:04:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 20:04:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 20:04:29] 2.13.3.0 12468 22169 351280 153102 1 683 19202806 32947201 22529 16776704 0 84296908 99.379 128636881 33577 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-20 20:04:29] CVMFS is ok
[2025-11-20 20:04:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 20:04:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 20:04:29] Further information can be found at the LHC@home message board.
[2025-11-20 20:04:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 20:04:29] Checking for apptainer binary...
[2025-11-20 20:04:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 20:04:29] Running /usr/bin/apptainer --version
[2025-11-20 20:04:29] apptainer version 1.4.4-1.el9
[2025-11-20 20:04:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 20:04:29] c6-6-8-1.aglt2.org
[2025-11-20 20:04:29] apptainer works
[2025-11-20 20:04:29] Set ATHENA_PROC_NUMBER=9
[2025-11-20 20:04:29] Set ATHENA_CORE_NUMBER=9
[2025-11-20 20:04:30] Starting ATLAS job with PandaID=6890967669
[2025-11-20 20:04:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 07:59:41]  *** The last 200 lines of the pilot log: ***
[2025-11-21 07:59:41] 2025-11-21 12:58:55,022 | INFO     | PID=3485930 has CPU usage=16.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-21 07:59:41] 2025-11-21 12:58:55,022 | INFO     | .. there are 37 such processes running
[2025-11-21 07:59:41] 2025-11-21 12:58:55,940 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-21 07:59:41] 2025-11-21 12:58:55,964 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2727.7714895833337
[2025-11-21 07:59:41] 2025-11-21 12:58:56,001 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6890967669/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 07:59:41] 2025-11-21 12:58:56,002 | INFO     | extracted standard info from prmon json
[2025-11-21 07:59:41] 2025-11-21 12:58:56,003 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 07:59:41] 2025-11-21 12:58:56,003 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 07:59:41] 2025-11-21 12:58:56,014 | INFO     | fitting pss+swap vs Time
[2025-11-21 07:59:41] 2025-11-21 12:58:56,015 | INFO     | sum of square deviations: 106340252274.88443
[2025-11-21 07:59:41] 2025-11-21 12:58:56,022 | INFO     | time since job start (42814s) is within the limit (172800.0s)
[2025-11-21 07:59:41] 2025-11-21 12:58:56,026 | INFO     | sum of deviations: 1511512286139.7998
[2025-11-21 07:59:41] 2025-11-21 12:58:56,026 | INFO     | mean x: 1763708549.4871428
[2025-11-21 07:59:41] 2025-11-21 12:58:56,026 | INFO     | mean y: 3013602.2
[2025-11-21 07:59:41] 2025-11-21 12:58:56,026 | INFO     | intersect: -25066206045.958096
[2025-11-21 07:59:41] 2025-11-21 12:58:56,027 | INFO     | chi2: 6.510219546888179
[2025-11-21 07:59:41] 2025-11-21 12:58:56,028 | INFO     | sum of square deviations: 104077806174.99866
[2025-11-21 07:59:41] 2025-11-21 12:58:56,038 | INFO     | sum of deviations: 1761210550266.592
[2025-11-21 07:59:41] 2025-11-21 12:58:56,039 | INFO     | mean x: 1763708397.0014389
[2025-11-21 07:59:41] 2025-11-21 12:58:56,039 | INFO     | mean y: 3030437.4100719425
[2025-11-21 07:59:41] 2025-11-21 12:58:56,039 | INFO     | intersect: -29842543278.56332
[2025-11-21 07:59:41] 2025-11-21 12:58:56,040 | INFO     | chi2: 3.2097695301450644
[2025-11-21 07:59:41] 2025-11-21 12:58:56,040 | INFO     | current chi2=3.2097695301450644 (change=50.696447223822084 %)
[2025-11-21 07:59:41] 2025-11-21 12:58:56,041 | INFO     | sum of square deviations: 101847686262.3246
[2025-11-21 07:59:41] 2025-11-21 12:58:56,050 | INFO     | sum of deviations: 1840458811527.4226
[2025-11-21 07:59:41] 2025-11-21 12:58:56,051 | INFO     | mean x: 1763708244.515942
[2025-11-21 07:59:41] 2025-11-21 12:58:56,051 | INFO     | mean y: 3035847.007246377
[2025-11-21 07:59:41] 2025-11-21 12:58:56,051 | INFO     | intersect: -31868403738.00468
[2025-11-21 07:59:41] 2025-11-21 12:58:56,052 | INFO     | chi2: 2.636395407752042
[2025-11-21 07:59:41] 2025-11-21 12:58:56,052 | INFO     | current chi2=2.636395407752042 (change=17.863404740062716 %)
[2025-11-21 07:59:41] 2025-11-21 12:58:56,052 | INFO     | right removable region: 689
[2025-11-21 07:59:41] 2025-11-21 12:58:56,053 | INFO     | sum of square deviations: 104076957664.9986
[2025-11-21 07:59:41] 2025-11-21 12:58:56,063 | INFO     | sum of deviations: 1280346175448.7764
[2025-11-21 07:59:41] 2025-11-21 12:58:56,063 | INFO     | mean x: 1763708702.0014389
[2025-11-21 07:59:41] 2025-11-21 12:58:56,063 | INFO     | mean y: 3029165.224460432
[2025-11-21 07:59:41] 2025-11-21 12:58:56,063 | INFO     | intersect: -21693970265.540928
[2025-11-21 07:59:41] 2025-11-21 12:58:56,064 | INFO     | chi2: 3.9920373211953035
[2025-11-21 07:59:41] 2025-11-21 12:58:56,064 | INFO     | current chi2=3.9920373211953035 (change=38.68045013776136 %)
[2025-11-21 07:59:41] 2025-11-21 12:58:56,065 | INFO     | sum of square deviations: 101846201232.44821
[2025-11-21 07:59:41] 2025-11-21 12:58:56,075 | INFO     | sum of deviations: 1229193800210.5718
[2025-11-21 07:59:41] 2025-11-21 12:58:56,075 | INFO     | mean x: 1763708854.5086956
[2025-11-21 07:59:41] 2025-11-21 12:58:56,075 | INFO     | mean y: 3032661.1550724637
[2025-11-21 07:59:41] 2025-11-21 12:58:56,075 | INFO     | intersect: -21283377269.7425
[2025-11-21 07:59:41] 2025-11-21 12:58:56,076 | INFO     | chi2: 3.9670830902803877
[2025-11-21 07:59:41] 2025-11-21 12:58:56,077 | INFO     | current chi2=3.9670830902803877 (change=0.6251001407833515 %)
[2025-11-21 07:59:41] 2025-11-21 12:58:56,077 | INFO     | left removable region: 20
[2025-11-21 07:59:41] 2025-11-21 12:58:56,077 | INFO     | sum of square deviations: 92826578994.82794
[2025-11-21 07:59:41] 2025-11-21 12:58:56,087 | INFO     | sum of deviations: 1466571605691.965
[2025-11-21 07:59:41] 2025-11-21 12:58:56,087 | INFO     | mean x: 1763708824.0418534
[2025-11-21 07:59:41] 2025-11-21 12:58:56,087 | INFO     | mean y: 3061186.9656203287
[2025-11-21 07:59:41] 2025-11-21 12:58:56,087 | INFO     | intersect: -27861859723.157196
[2025-11-21 07:59:41] 2025-11-21 12:58:56,088 | INFO     | chi2: 0.04237191275503593
[2025-11-21 07:59:41] 2025-11-21 12:58:56,088 | INFO     | current memory leak: 15.80 B/s (using 669 data points, chi2=0.04)
[2025-11-21 07:59:41] 2025-11-21 12:58:56,089 | INFO     | could have reported an average CPU frequency of 2644 MHz (27 samples)
[2025-11-21 07:59:41] 2025-11-21 12:58:56,089 | INFO     | ..............................
[2025-11-21 07:59:41] 2025-11-21 12:58:56,089 | INFO     | . Timing measurements:
[2025-11-21 07:59:41] 2025-11-21 12:58:56,090 | INFO     | . get job = 0 s
[2025-11-21 07:59:41] 2025-11-21 12:58:56,090 | INFO     | . initial setup = 4 s
[2025-11-21 07:59:41] 2025-11-21 12:58:56,090 | INFO     | . payload setup = 26 s
[2025-11-21 07:59:41] 2025-11-21 12:58:56,090 | INFO     | . stage-in = 0 s
[2025-11-21 07:59:41] 2025-11-21 12:58:56,090 | INFO     | . payload execution = 42707 s
[2025-11-21 07:59:41] 2025-11-21 12:58:56,090 | INFO     | . stage-out = 4 s
[2025-11-21 07:59:41] 2025-11-21 12:58:56,090 | INFO     | . log creation = 0 s
[2025-11-21 07:59:41] 2025-11-21 12:58:56,090 | INFO     | ..............................
[2025-11-21 07:59:41] 2025-11-21 12:58:56,191 | INFO     | 
[2025-11-21 07:59:41] 2025-11-21 12:58:56,192 | INFO     | job summary report
[2025-11-21 07:59:41] 2025-11-21 12:58:56,192 | INFO     | --------------------------------------------------
[2025-11-21 07:59:41] 2025-11-21 12:58:56,192 | INFO     | PanDA job id: 6890967669
[2025-11-21 07:59:41] 2025-11-21 12:58:56,192 | INFO     | task id: 47483661
[2025-11-21 07:59:41] 2025-11-21 12:58:56,192 | INFO     | errors: (none)
[2025-11-21 07:59:41] 2025-11-21 12:58:56,192 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 07:59:41] 2025-11-21 12:58:56,192 | INFO     | pilot state: finished 
[2025-11-21 07:59:41] 2025-11-21 12:58:56,192 | INFO     | transexitcode: 0
[2025-11-21 07:59:41] 2025-11-21 12:58:56,192 | INFO     | exeerrorcode: 0
[2025-11-21 07:59:41] 2025-11-21 12:58:56,192 | INFO     | exeerrordiag: 
[2025-11-21 07:59:41] 2025-11-21 12:58:56,192 | INFO     | exitcode: 0
[2025-11-21 07:59:41] 2025-11-21 12:58:56,192 | INFO     | exitmsg: OK
[2025-11-21 07:59:41] 2025-11-21 12:58:56,192 | INFO     | cpuconsumptiontime: 256036 s
[2025-11-21 07:59:41] 2025-11-21 12:58:56,193 | INFO     | nevents: 1000
[2025-11-21 07:59:41] 2025-11-21 12:58:56,193 | INFO     | neventsw: 0
[2025-11-21 07:59:41] 2025-11-21 12:58:56,193 | INFO     | pid: 3493619
[2025-11-21 07:59:41] 2025-11-21 12:58:56,193 | INFO     | pgrp: 3493619
[2025-11-21 07:59:41] 2025-11-21 12:58:56,193 | INFO     | corecount: 9
[2025-11-21 07:59:41] 2025-11-21 12:58:56,193 | INFO     | event service: False
[2025-11-21 07:59:41] 2025-11-21 12:58:56,193 | INFO     | sizes: {0: 2297964, 1: 2298565, 2: 2298677, 3: 2298876, 14: 2298876, 25: 2298904, 26: 2299322, 36: 2299350, 42738: 2344603, 42743: 2353653, 42757: 2353843}
[2025-11-21 07:59:41] 2025-11-21 12:58:56,193 | INFO     | --------------------------------------------------
[2025-11-21 07:59:41] 2025-11-21 12:58:56,193 | INFO     | 
[2025-11-21 07:59:41] 2025-11-21 12:58:56,193 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-21 07:59:41] 2025-11-21 12:58:56,258 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 07:59:41] 2025-11-21 12:58:56,259 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 07:59:41] 2025-11-21 12:58:56,259 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 07:59:41] 2025-11-21 12:58:56,259 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 07:59:41] 2025-11-21 12:58:56,259 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 07:59:41] 2025-11-21 12:58:56,259 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 07:59:41] 2025-11-21 12:58:56,259 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 07:59:41] 2025-11-21 12:58:56,259 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 07:59:41] 2025-11-21 12:58:56,259 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 07:59:41] 2025-11-21 12:58:56,259 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 07:59:41] 2025-11-21 12:58:56,259 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 07:59:41] 2025-11-21 12:58:56,259 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 07:59:41] 2025-11-21 12:58:56,259 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 07:59:41] 2025-11-21 12:58:56,260 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 07:59:41] 2025-11-21 12:58:56,260 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 07:59:41] 2025-11-21 12:58:56,260 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 07:59:41] 2025-11-21 12:58:56,260 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 07:59:41] 2025-11-21 12:58:56,260 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 07:59:41] 2025-11-21 12:58:56,260 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 07:59:41] 2025-11-21 12:58:56,260 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 07:59:41] 2025-11-21 12:58:56,260 | INFO     | job 6890967669 has completed (purged errors)
[2025-11-21 07:59:41] 2025-11-21 12:58:56,260 | INFO     | overall cleanup function is called
[2025-11-21 07:59:41] 2025-11-21 12:58:57,285 | INFO     | --- collectZombieJob: --- 10, [3493619]
[2025-11-21 07:59:41] 2025-11-21 12:58:57,285 | INFO     | zombie collector waiting for pid 3493619
[2025-11-21 07:59:41] 2025-11-21 12:58:57,285 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 07:59:41] 2025-11-21 12:58:57,286 | INFO     | collected zombie processes
[2025-11-21 07:59:41] 2025-11-21 12:58:57,286 | INFO     | will attempt to kill all subprocesses of pid=3493619
[2025-11-21 07:59:41] 2025-11-21 12:58:57,953 | INFO     | process IDs to be killed: [3493619] (in reverse order)
[2025-11-21 07:59:41] 2025-11-21 12:58:58,110 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 07:59:41] 2025-11-21 12:58:58,111 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 07:59:41] 2025-11-21 12:58:58,127 | INFO     | did not find any defunct processes belonging to 3493619
[2025-11-21 07:59:41] 2025-11-21 12:58:58,143 | INFO     | did not find any defunct processes belonging to 3493619
[2025-11-21 07:59:41] 2025-11-21 12:58:58,144 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 07:59:41] 2025-11-21 12:58:58,145 | INFO     | ready for new job
[2025-11-21 07:59:41] 2025-11-21 12:58:58,145 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 07:59:41] 2025-11-21 12:58:58,148 | INFO     | ***************************************
[2025-11-21 07:59:41] 2025-11-21 12:58:58,148 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 07:59:41] 2025-11-21 12:58:58,148 | INFO     | ***************************************
[2025-11-21 07:59:41] 2025-11-21 12:58:58,149 | INFO     | 
[2025-11-21 07:59:41] 2025-11-21 12:58:58,155 | INFO     | architecture information:
[2025-11-21 07:59:41] 2025-11-21 12:58:58,156 | INFO     | executing command: cat /etc/os-release
[2025-11-21 07:59:41] 2025-11-21 12:58:58,191 | INFO     | cat /etc/os-release:
[2025-11-21 07:59:41] NAME="CentOS Linux"
[2025-11-21 07:59:41] VERSION="7 (Core)"
[2025-11-21 07:59:41] ID="centos"
[2025-11-21 07:59:41] ID_LIKE="rhel fedora"
[2025-11-21 07:59:41] VERSION_ID="7"
[2025-11-21 07:59:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 07:59:41] ANSI_COLOR="0;31"
[2025-11-21 07:59:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 07:59:41] HOME_URL="https://www.centos.org/"
[2025-11-21 07:59:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 07:59:41] 
[2025-11-21 07:59:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 07:59:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 07:59:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 07:59:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 07:59:41] 
[2025-11-21 07:59:41] 2025-11-21 12:58:58,191 | INFO     | ***************************************
[2025-11-21 07:59:41] 2025-11-21 12:58:58,694 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-21 07:59:41] 2025-11-21 12:58:58,715 | INFO     | sufficient remaining disk space (61923655680 B)
[2025-11-21 07:59:41] 2025-11-21 12:58:58,715 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 07:59:41] 2025-11-21 12:58:58,716 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 07:59:41] 2025-11-21 12:58:58,716 | INFO     | update_server=False
[2025-11-21 07:59:41] 2025-11-21 12:58:58,716 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 07:59:41] 2025-11-21 12:58:58,716 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 07:59:41] 2025-11-21 12:58:58,716 | INFO     | aborting loop
[2025-11-21 07:59:41] 2025-11-21 12:58:59,077 | INFO     | all data control threads have been joined
[2025-11-21 07:59:41] 2025-11-21 12:58:59,721 | INFO     | [job] retrieve thread has finished
[2025-11-21 07:59:41] 2025-11-21 12:58:59,722 | INFO     | [job] job monitor thread has finished
[2025-11-21 07:59:41] 2025-11-21 12:58:59,736 | INFO     | [data] copytool_in thread has finished
[2025-11-21 07:59:41] 2025-11-21 12:58:59,884 | INFO     | all payload control threads have been joined
[2025-11-21 07:59:41] 2025-11-21 12:58:59,887 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 07:59:41] 2025-11-21 12:59:00,025 | INFO     | all job control threads have been joined
[2025-11-21 07:59:41] 2025-11-21 12:59:00,083 | INFO     | [data] control thread has finished
[2025-11-21 07:59:41] 2025-11-21 12:59:00,137 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 07:59:41] 2025-11-21 12:59:00,200 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 07:59:41] 2025-11-21 12:59:00,522 | INFO     | [job] validate thread has finished
[2025-11-21 07:59:41] 2025-11-21 12:59:00,533 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 07:59:41] 2025-11-21 12:59:00,711 | INFO     | [payload] validate_post thread has finished
[2025-11-21 07:59:41] 2025-11-21 12:59:00,834 | INFO     | [payload] failed_post thread has finished
[2025-11-21 07:59:41] 2025-11-21 12:59:00,894 | INFO     | [payload] control thread has finished
[2025-11-21 07:59:41] 2025-11-21 12:59:01,032 | INFO     | [job] control thread has finished
[2025-11-21 07:59:41] 2025-11-21 12:59:01,035 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 07:59:41] 2025-11-21 12:59:01,206 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 07:59:41] 2025-11-21 12:59:01,504 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 07:59:41] 2025-11-21 12:59:01,893 | INFO     | [data] copytool_out thread has finished
[2025-11-21 07:59:41] 2025-11-21 12:59:02,212 | INFO     | [job] queue monitor thread has finished
[2025-11-21 07:59:41] 2025-11-21 12:59:05,513 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 07:59:41] 2025-11-21 12:59:29,686 | INFO     | PID=3485930 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 07:59:41] 2025-11-21 12:59:29,686 | INFO     | .. there are 37 such processes running
[2025-11-21 07:59:41] 2025-11-21 12:59:29,686 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 07:59:41] 2025-11-21 12:59:29,686 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 07:59:41] 2025-11-21 12:59:29,686 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 07:59:41] 2025-11-21 12:59:35,473 | INFO     | [monitor] cgroup control has ended
[2025-11-21 07:59:41] 2025-11-21 12:59:35,609 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140559017154368)>', '<ExcThread(monitor, started 140558257329920)>']
[2025-11-21 07:59:41] 2025-11-21 12:59:35,722 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 07:59:41] 2025-11-21 12:59:35,722 | INFO     | [monitor] control thread has ended
[2025-11-21 07:59:41] 2025-11-21 12:59:40,635 | INFO     | all workflow threads have been joined
[2025-11-21 07:59:41] 2025-11-21 12:59:40,635 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 07:59:41] 2025-11-21 12:59:40,636 | INFO     | traces error code: 0
[2025-11-21 07:59:41] 2025-11-21 12:59:40,636 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 07:59:41] 2025-11-21 12:59:40,859 [wrapper] ==== pilot stdout END ====
[2025-11-21 07:59:41] 2025-11-21 12:59:40,861 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 07:59:41] 2025-11-21 12:59:40,863 [wrapper] pilotpid: 3485930
[2025-11-21 07:59:41] 2025-11-21 12:59:40,865 [wrapper] Pilot exit status: 0
[2025-11-21 07:59:41] 2025-11-21 12:59:40,889 [wrapper] pandaids: 6890967669
[2025-11-21 07:59:41] 2025-11-21 12:59:41,000 [wrapper] cleanup supervisor_pilot 2109685 3485931
[2025-11-21 07:59:41] 2025-11-21 12:59:41,004 [wrapper] Test setup, not cleaning
[2025-11-21 07:59:41] 2025-11-21 12:59:41,012 [wrapper] apfmon messages muted
[2025-11-21 07:59:41] 2025-11-21 12:59:41,029 [wrapper] ==== wrapper stdout END ====
[2025-11-21 07:59:41] 2025-11-21 12:59:41,031 [wrapper] ==== wrapper stderr END ====
[2025-11-21 07:59:41]  *** Error codes and diagnostics ***
[2025-11-21 07:59:41]     "exeErrorCode": 0,
[2025-11-21 07:59:41]     "exeErrorDiag": "",
[2025-11-21 07:59:41]     "pilotErrorCode": 0,
[2025-11-21 07:59:41]     "pilotErrorDiag": "",
[2025-11-21 07:59:41]  *** Listing of results directory ***
[2025-11-21 07:59:41] total 1328316
[2025-11-21 07:59:41] -rw-r--r-- 1 boincer umatlas    576529 Nov 17 22:56 pilot3.tar.gz
[2025-11-21 07:59:41] -rwx------ 1 boincer umatlas     36292 Nov 17 23:00 runpilot2-wrapper.sh
[2025-11-21 07:59:41] -rw-r--r-- 1 boincer umatlas      5112 Nov 17 23:00 queuedata.json
[2025-11-21 07:59:41] -rw-r--r-- 1 boincer umatlas       100 Nov 20 20:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 07:59:41] -rwxr-xr-x 1 boincer umatlas      7986 Nov 20 20:04 run_atlas
[2025-11-21 07:59:41] -rw-r--r-- 1 boincer umatlas       105 Nov 20 20:04 job.xml
[2025-11-21 07:59:41] -rw-r--r-- 2 boincer umatlas 409892949 Nov 20 20:04 EVNT.47483658._000097.pool.root.1
[2025-11-21 07:59:41] -rw-r--r-- 2 boincer umatlas     15120 Nov 20 20:04 start_atlas.sh
[2025-11-21 07:59:41] drwxrwx--x 2 boincer umatlas      4096 Nov 20 20:04 shared
[2025-11-21 07:59:41] -rw-r--r-- 2 boincer umatlas    590097 Nov 20 20:04 input.tar.gz
[2025-11-21 07:59:41] -rw-r--r-- 1 boincer umatlas         0 Nov 20 20:04 boinc_lockfile
[2025-11-21 07:59:41] -rw-r--r-- 1 boincer umatlas      2771 Nov 20 20:04 pandaJob.out
[2025-11-21 07:59:41] -rw------- 1 boincer umatlas    989817 Nov 20 20:05 agis_schedconf.cvmfs.json
[2025-11-21 07:59:41] drwx------ 5 boincer umatlas      4096 Nov 20 20:05 pilot3
[2025-11-21 07:59:41] -rw-r--r-- 1 boincer umatlas       533 Nov 21 07:48 boinc_task_state.xml
[2025-11-21 07:59:41] -rw-r--r-- 1 boincer umatlas      6880 Nov 21 07:55 init_data.xml
[2025-11-21 07:59:41] -rw------- 1 boincer umatlas 931261462 Nov 21 07:57 HITS.47483661._000970.pool.root.1
[2025-11-21 07:59:41] -rw------- 1 boincer umatlas      1052 Nov 21 07:58 memory_monitor_summary.json
[2025-11-21 07:59:41] -rw------- 1 boincer umatlas   1526164 Nov 21 07:58 agis_ddmendpoints.agis.ALL.json
[2025-11-21 07:59:41] -rw------- 1 boincer umatlas   2040303 Nov 21 07:58 log.47483661._000970.job.log.tgz.1
[2025-11-21 07:59:41] -rw------- 1 boincer umatlas        95 Nov 21 07:58 pilot_heartbeat.json
[2025-11-21 07:59:41] -rw------- 1 boincer umatlas      8622 Nov 21 07:58 heartbeat.json
[2025-11-21 07:59:41] -rw-r--r-- 1 boincer umatlas        29 Nov 21 07:59 wrapper_checkpoint.txt
[2025-11-21 07:59:41] -rw-r--r-- 1 boincer umatlas      8192 Nov 21 07:59 boinc_mmap_file
[2025-11-21 07:59:41] -rw------- 1 boincer umatlas      4824 Nov 21 07:59 pilotlog.txt
[2025-11-21 07:59:41] -rw------- 1 boincer umatlas   5520965 Nov 21 07:59 log.47483661._000970.job.log.1
[2025-11-21 07:59:41] -rw------- 1 boincer umatlas       353 Nov 21 07:59 output.list
[2025-11-21 07:59:41] -rw-r--r-- 1 boincer umatlas       620 Nov 21 07:59 runtime_log
[2025-11-21 07:59:41] -rw------- 1 boincer umatlas   7577600 Nov 21 07:59 result.tar.gz
[2025-11-21 07:59:41] -rw-r--r-- 1 boincer umatlas      8704 Nov 21 07:59 runtime_log.err
[2025-11-21 07:59:41] -rw------- 1 boincer umatlas       660 Nov 21 07:59 kTELDmQ4Rf8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGBKODmaPnk2m.diag
[2025-11-21 07:59:41] -rw-r--r-- 1 boincer umatlas     21440 Nov 21 07:59 stderr.txt
[2025-11-21 07:59:41] HITS file was successfully produced:
[2025-11-21 07:59:41] -rw------- 1 boincer umatlas 931261462 Nov 21 07:57 shared/HITS.pool.root.1
[2025-11-21 07:59:41]  *** Contents of shared directory: ***
[2025-11-21 07:59:41] total 1317728
[2025-11-21 07:59:41] -rw-r--r-- 2 boincer umatlas 409892949 Nov 20 20:04 ATLAS.root_0
[2025-11-21 07:59:41] -rw-r--r-- 2 boincer umatlas     15120 Nov 20 20:04 start_atlas.sh
[2025-11-21 07:59:41] -rw-r--r-- 2 boincer umatlas    590097 Nov 20 20:04 input.tar.gz
[2025-11-21 07:59:41] -rw------- 1 boincer umatlas 931261462 Nov 21 07:57 HITS.pool.root.1
[2025-11-21 07:59:41] -rw------- 1 boincer umatlas   7577600 Nov 21 07:59 result.tar.gz
07:59:43 (3481867): run_atlas exited; CPU time 257645.979091
07:59:43 (3481867): called boinc_finish(0)

</stderr_txt>
]]>

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