Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:43:35 (24785): wrapper (7.7.26015): starting
23:43:35 (24785): wrapper: running run_atlas (--nthreads 8)
[2025-11-22 23:43:35] Arguments: --nthreads 8
[2025-11-22 23:43:35] Threads: 8
[2025-11-22 23:43:35] Checking for CVMFS
[2025-11-22 23:43:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 23:43:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 23:43:36] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 23:43:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 23:43:38] 2.11.2.0 18458 280063 145920 153187 0 192 20623081 25165824 3960 130560 2 124750779 99.877 76911109 3055 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-22 23:43:38] CVMFS is ok
[2025-11-22 23:43:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 23:43:38] Checking for apptainer binary...
[2025-11-22 23:43:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 23:43:38] Running /usr/bin/apptainer --version
[2025-11-22 23:43:38] apptainer version 1.3.2-1.el7
[2025-11-22 23:43:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 23:43:46] cg-vwn434.simple-grid.lan
[2025-11-22 23:43:46] apptainer works
[2025-11-22 23:43:46] Set ATHENA_PROC_NUMBER=8
[2025-11-22 23:43:46] Set ATHENA_CORE_NUMBER=8
[2025-11-22 23:43:46] Starting ATLAS job with PandaID=6892528089
[2025-11-22 23:43:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 01:49:42]  *** The last 200 lines of the pilot log: ***
[2025-11-24 01:49:42] 2025-11-24 00:48:29,851 | INFO     | time since job start (93698s) is within the limit (172800.0s)
[2025-11-24 01:49:42] 2025-11-24 00:48:29,987 | INFO     | monitor loop #6262: job 0:6892528089 is in state 'finished'
[2025-11-24 01:49:42] 2025-11-24 00:48:29,988 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:49:42] 2025-11-24 00:48:31,862 | INFO     | time since job start (93700s) is within the limit (172800.0s)
[2025-11-24 01:49:42] 2025-11-24 00:48:32,492 | INFO     | monitor loop #6263: job 0:6892528089 is in state 'finished'
[2025-11-24 01:49:42] 2025-11-24 00:48:32,493 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:49:42] 2025-11-24 00:48:33,873 | INFO     | time since job start (93702s) is within the limit (172800.0s)
[2025-11-24 01:49:42] 2025-11-24 00:48:34,999 | INFO     | monitor loop #6264: job 0:6892528089 is in state 'finished'
[2025-11-24 01:49:42] 2025-11-24 00:48:35,000 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:49:42] 2025-11-24 00:48:35,880 | INFO     | time since job start (93704s) is within the limit (172800.0s)
[2025-11-24 01:49:42] 2025-11-24 00:48:37,504 | INFO     | monitor loop #6265: job 0:6892528089 is in state 'finished'
[2025-11-24 01:49:42] 2025-11-24 00:48:37,505 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:49:42] 2025-11-24 00:48:37,886 | INFO     | time since job start (93706s) is within the limit (172800.0s)
[2025-11-24 01:49:42] 2025-11-24 00:48:39,893 | INFO     | time since job start (93708s) is within the limit (172800.0s)
[2025-11-24 01:49:42] 2025-11-24 00:48:40,019 | INFO     | monitor loop #6266: job 0:6892528089 is in state 'finished'
[2025-11-24 01:49:42] 2025-11-24 00:48:40,019 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 01:49:42] 2025-11-24 00:48:40,678 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 01:49:42] 2025-11-24 00:48:40,679 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-24 01:49:42] 2025-11-24 00:48:40,681 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6892528089/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 01:49:42] 2025-11-24 00:48:40,682 | INFO     | extracted standard info from prmon json
[2025-11-24 01:49:42] 2025-11-24 00:48:40,682 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 01:49:42] 2025-11-24 00:48:40,682 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 01:49:42] 2025-11-24 00:48:40,714 | INFO     | fitting pss+swap vs Time
[2025-11-24 01:49:42] 2025-11-24 00:48:40,717 | INFO     | sum of square deviations: 1110581874704.149
[2025-11-24 01:49:42] 2025-11-24 00:48:40,786 | INFO     | sum of deviations: 3014097966913.41
[2025-11-24 01:49:42] 2025-11-24 00:48:40,788 | INFO     | mean x: 1763898607.872549
[2025-11-24 01:49:42] 2025-11-24 00:48:40,788 | INFO     | mean y: 2861115.043137255
[2025-11-24 01:49:42] 2025-11-24 00:48:40,788 | INFO     | intersect: -4784325970.3271675
[2025-11-24 01:49:42] 2025-11-24 00:48:40,790 | INFO     | chi2: 14.39641500877058
[2025-11-24 01:49:42] 2025-11-24 00:48:40,793 | INFO     | sum of square deviations: 1099729948922.1958
[2025-11-24 01:49:42] 2025-11-24 00:48:40,855 | INFO     | sum of deviations: 3510560236647.139
[2025-11-24 01:49:42] 2025-11-24 00:48:40,855 | INFO     | mean x: 1763898455.3770492
[2025-11-24 01:49:42] 2025-11-24 00:48:40,856 | INFO     | mean y: 2868092.678032787
[2025-11-24 01:49:42] 2025-11-24 00:48:40,856 | INFO     | intersect: -5627852235.525079
[2025-11-24 01:49:42] 2025-11-24 00:48:40,857 | INFO     | chi2: 11.325054394071026
[2025-11-24 01:49:42] 2025-11-24 00:48:40,858 | INFO     | current chi2=11.325054394071026 (change=21.334204472630304 %)
[2025-11-24 01:49:42] 2025-11-24 00:48:40,858 | INFO     | right removable region: 1524
[2025-11-24 01:49:42] 2025-11-24 00:48:40,860 | INFO     | sum of square deviations: 1099728667922.198
[2025-11-24 01:49:42] 2025-11-24 00:48:40,921 | INFO     | sum of deviations: 2534932721919.8745
[2025-11-24 01:49:42] 2025-11-24 00:48:40,922 | INFO     | mean x: 1763898760.3770492
[2025-11-24 01:49:42] 2025-11-24 00:48:40,922 | INFO     | mean y: 2867844.6419672132
[2025-11-24 01:49:42] 2025-11-24 00:48:40,922 | INFO     | intersect: -4063012054.880684
[2025-11-24 01:49:42] 2025-11-24 00:48:40,924 | INFO     | chi2: 11.761302747103581
[2025-11-24 01:49:42] 2025-11-24 00:48:40,924 | INFO     | current chi2=11.761302747103581 (change=18.303947615164166 %)
[2025-11-24 01:49:42] 2025-11-24 00:48:40,924 | INFO     | left removable region: 10
[2025-11-24 01:49:42] 2025-11-24 00:48:40,926 | INFO     | sum of square deviations: 1076103150475.0718
[2025-11-24 01:49:42] 2025-11-24 00:48:40,987 | INFO     | sum of deviations: 3051954780543.6616
[2025-11-24 01:49:42] 2025-11-24 00:48:40,988 | INFO     | mean x: 1763898729.8824306
[2025-11-24 01:49:42] 2025-11-24 00:48:40,988 | INFO     | mean y: 2878178.3857331574
[2025-11-24 01:49:42] 2025-11-24 00:48:40,988 | INFO     | intersect: -4999745555.856631
[2025-11-24 01:49:42] 2025-11-24 00:48:40,990 | INFO     | chi2: 7.6671977641301545
[2025-11-24 01:49:42] 2025-11-24 00:48:40,990 | INFO     | current memory leak: 2.84 B/s (using 1514 data points, chi2=7.67)
[2025-11-24 01:49:42] 2025-11-24 00:48:40,994 | INFO     | could have reported an average CPU frequency of 1999 MHz (52 samples)
[2025-11-24 01:49:42] 2025-11-24 00:48:40,994 | INFO     | ..............................
[2025-11-24 01:49:42] 2025-11-24 00:48:40,994 | INFO     | . Timing measurements:
[2025-11-24 01:49:42] 2025-11-24 00:48:40,994 | INFO     | . get job = 0 s
[2025-11-24 01:49:42] 2025-11-24 00:48:40,994 | INFO     | . initial setup = 5 s
[2025-11-24 01:49:42] 2025-11-24 00:48:40,994 | INFO     | . payload setup = 128 s
[2025-11-24 01:49:42] 2025-11-24 00:48:40,994 | INFO     | . stage-in = 0 s
[2025-11-24 01:49:42] 2025-11-24 00:48:40,994 | INFO     | . payload execution = 93398 s
[2025-11-24 01:49:42] 2025-11-24 00:48:40,995 | INFO     | . stage-out = 3 s
[2025-11-24 01:49:42] 2025-11-24 00:48:40,995 | INFO     | . log creation = 1 s
[2025-11-24 01:49:42] 2025-11-24 00:48:40,995 | INFO     | ..............................
[2025-11-24 01:49:42] 2025-11-24 00:48:41,282 | INFO     | 
[2025-11-24 01:49:42] 2025-11-24 00:48:41,283 | INFO     | job summary report
[2025-11-24 01:49:42] 2025-11-24 00:48:41,283 | INFO     | --------------------------------------------------
[2025-11-24 01:49:42] 2025-11-24 00:48:41,283 | INFO     | PanDA job id: 6892528089
[2025-11-24 01:49:42] 2025-11-24 00:48:41,283 | INFO     | task id: 47493029
[2025-11-24 01:49:42] 2025-11-24 00:48:41,283 | INFO     | errors: (none)
[2025-11-24 01:49:42] 2025-11-24 00:48:41,284 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 01:49:42] 2025-11-24 00:48:41,284 | INFO     | pilot state: finished 
[2025-11-24 01:49:42] 2025-11-24 00:48:41,284 | INFO     | transexitcode: 0
[2025-11-24 01:49:42] 2025-11-24 00:48:41,284 | INFO     | exeerrorcode: 0
[2025-11-24 01:49:42] 2025-11-24 00:48:41,284 | INFO     | exeerrordiag: 
[2025-11-24 01:49:42] 2025-11-24 00:48:41,284 | INFO     | exitcode: 0
[2025-11-24 01:49:42] 2025-11-24 00:48:41,284 | INFO     | exitmsg: OK
[2025-11-24 01:49:42] 2025-11-24 00:48:41,284 | INFO     | cpuconsumptiontime: 343776 s
[2025-11-24 01:49:42] 2025-11-24 00:48:41,284 | INFO     | nevents: 1000
[2025-11-24 01:49:42] 2025-11-24 00:48:41,284 | INFO     | neventsw: 0
[2025-11-24 01:49:42] 2025-11-24 00:48:41,285 | INFO     | pid: 3134
[2025-11-24 01:49:42] 2025-11-24 00:48:41,285 | INFO     | pgrp: 3134
[2025-11-24 01:49:42] 2025-11-24 00:48:41,285 | INFO     | corecount: 8
[2025-11-24 01:49:42] 2025-11-24 00:48:41,285 | INFO     | event service: False
[2025-11-24 01:49:42] 2025-11-24 00:48:41,285 | INFO     | sizes: {0: 2298569, 1: 2298824, 2: 2298824, 12: 2298852, 23: 2298880, 34: 2298908, 45: 2299064, 55: 2299092, 66: 2299120, 77: 2299148, 88: 2299204, 90: 2299774, 98
[2025-11-24 01:49:42] 2025-11-24 00:48:41,285 | INFO     | --------------------------------------------------
[2025-11-24 01:49:42] 2025-11-24 00:48:41,285 | INFO     | 
[2025-11-24 01:49:42] 2025-11-24 00:48:41,285 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-11-24 01:49:42] 2025-11-24 00:48:41,364 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 01:49:42] 2025-11-24 00:48:41,365 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 01:49:42] 2025-11-24 00:48:41,365 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 01:49:42] 2025-11-24 00:48:41,365 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 01:49:42] 2025-11-24 00:48:41,365 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 01:49:42] 2025-11-24 00:48:41,365 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 01:49:42] 2025-11-24 00:48:41,366 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 01:49:42] 2025-11-24 00:48:41,366 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 01:49:42] 2025-11-24 00:48:41,366 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 01:49:42] 2025-11-24 00:48:41,366 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 01:49:42] 2025-11-24 00:48:41,366 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 01:49:42] 2025-11-24 00:48:41,366 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 01:49:42] 2025-11-24 00:48:41,367 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 01:49:42] 2025-11-24 00:48:41,367 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 01:49:42] 2025-11-24 00:48:41,367 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 01:49:42] 2025-11-24 00:48:41,367 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 01:49:42] 2025-11-24 00:48:41,367 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 01:49:42] 2025-11-24 00:48:41,367 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 01:49:42] 2025-11-24 00:48:41,367 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 01:49:42] 2025-11-24 00:48:41,367 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 01:49:42] 2025-11-24 00:48:41,368 | INFO     | job 6892528089 has completed (purged errors)
[2025-11-24 01:49:42] 2025-11-24 00:48:41,368 | INFO     | overall cleanup function is called
[2025-11-24 01:49:42] 2025-11-24 00:48:42,387 | INFO     | --- collectZombieJob: --- 10, [3134]
[2025-11-24 01:49:42] 2025-11-24 00:48:42,388 | INFO     | zombie collector waiting for pid 3134
[2025-11-24 01:49:42] 2025-11-24 00:48:42,388 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 01:49:42] 2025-11-24 00:48:42,388 | INFO     | collected zombie processes
[2025-11-24 01:49:42] 2025-11-24 00:48:42,388 | INFO     | will attempt to kill all subprocesses of pid=3134
[2025-11-24 01:49:42] 2025-11-24 00:48:42,508 | INFO     | process IDs to be killed: [3134] (in reverse order)
[2025-11-24 01:49:42] 2025-11-24 00:48:43,236 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 01:49:42] 2025-11-24 00:48:43,236 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 01:49:42] 2025-11-24 00:48:43,240 | INFO     | did not find any defunct processes belonging to 3134
[2025-11-24 01:49:42] 2025-11-24 00:48:43,243 | INFO     | did not find any defunct processes belonging to 3134
[2025-11-24 01:49:42] 2025-11-24 00:48:43,275 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 01:49:42] 2025-11-24 00:48:43,275 | INFO     | ready for new job
[2025-11-24 01:49:42] 2025-11-24 00:48:43,275 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 01:49:42] 2025-11-24 00:48:43,291 | INFO     | ***************************************
[2025-11-24 01:49:42] 2025-11-24 00:48:43,292 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 01:49:42] 2025-11-24 00:48:43,292 | INFO     | ***************************************
[2025-11-24 01:49:42] 2025-11-24 00:48:43,292 | INFO     | 
[2025-11-24 01:49:42] 2025-11-24 00:48:43,293 | INFO     | pilot is running in a VM
[2025-11-24 01:49:42] 2025-11-24 00:48:43,293 | INFO     | architecture information:
[2025-11-24 01:49:42] 2025-11-24 00:48:43,307 | INFO     | executing command: cat /etc/os-release
[2025-11-24 01:49:42] 2025-11-24 00:48:43,460 | INFO     | cat /etc/os-release:
[2025-11-24 01:49:42] NAME="CentOS Linux"
[2025-11-24 01:49:42] VERSION="7 (Core)"
[2025-11-24 01:49:42] ID="centos"
[2025-11-24 01:49:42] ID_LIKE="rhel fedora"
[2025-11-24 01:49:42] VERSION_ID="7"
[2025-11-24 01:49:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 01:49:42] ANSI_COLOR="0;31"
[2025-11-24 01:49:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 01:49:42] HOME_URL="https://www.centos.org/"
[2025-11-24 01:49:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 01:49:42] 
[2025-11-24 01:49:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 01:49:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 01:49:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 01:49:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 01:49:42] 
[2025-11-24 01:49:42] 2025-11-24 00:48:43,460 | INFO     | ***************************************
[2025-11-24 01:49:42] 2025-11-24 00:48:43,964 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-11-24 01:49:42] 2025-11-24 00:48:44,013 | INFO     | sufficient remaining disk space (495059992576 B)
[2025-11-24 01:49:42] 2025-11-24 00:48:44,013 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 01:49:42] 2025-11-24 00:48:44,013 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 01:49:42] 2025-11-24 00:48:44,013 | INFO     | update_server=False
[2025-11-24 01:49:42] 2025-11-24 00:48:44,014 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 01:49:42] 2025-11-24 00:48:44,014 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 01:49:42] 2025-11-24 00:48:44,014 | INFO     | aborting loop
[2025-11-24 01:49:42] 2025-11-24 00:48:44,014 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 01:49:42] 2025-11-24 00:48:44,290 | INFO     | all payload control threads have been joined
[2025-11-24 01:49:42] 2025-11-24 00:48:44,481 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 01:49:42] 2025-11-24 00:48:44,905 | INFO     | all data control threads have been joined
[2025-11-24 01:49:42] 2025-11-24 00:48:45,019 | INFO     | [job] retrieve thread has finished
[2025-11-24 01:49:42] 2025-11-24 00:48:45,020 | INFO     | [job] job monitor thread has finished
[2025-11-24 01:49:42] 2025-11-24 00:48:45,032 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 01:49:42] 2025-11-24 00:48:45,051 | INFO     | [payload] validate_post thread has finished
[2025-11-24 01:49:42] 2025-11-24 00:48:45,120 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 01:49:42] 2025-11-24 00:48:45,141 | INFO     | [data] copytool_in thread has finished
[2025-11-24 01:49:42] 2025-11-24 00:48:45,296 | INFO     | [payload] control thread has finished
[2025-11-24 01:49:42] 2025-11-24 00:48:45,541 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 01:49:42] 2025-11-24 00:48:45,625 | INFO     | all job control threads have been joined
[2025-11-24 01:49:42] 2025-11-24 00:48:45,824 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 01:49:42] 2025-11-24 00:48:45,910 | INFO     | [data] control thread has finished
[2025-11-24 01:49:42] 2025-11-24 00:48:46,021 | INFO     | [data] copytool_out thread has finished
[2025-11-24 01:49:42] 2025-11-24 00:48:46,142 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 01:49:42] 2025-11-24 00:48:46,281 | INFO     | [payload] failed_post thread has finished
[2025-11-24 01:49:42] 2025-11-24 00:48:46,383 | INFO     | [job] validate thread has finished
[2025-11-24 01:49:42] 2025-11-24 00:48:46,631 | INFO     | [job] control thread has finished
[2025-11-24 01:49:42] 2025-11-24 00:48:47,148 | INFO     | [job] queue monitor thread has finished
[2025-11-24 01:49:42] 2025-11-24 00:48:48,489 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 01:49:42] 2025-11-24 00:49:13,138 | INFO     | PID=28672 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 01:49:42] 2025-11-24 00:49:13,138 | INFO     | .. there are 9 such processes running
[2025-11-24 01:49:42] 2025-11-24 00:49:13,138 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 01:49:42] 2025-11-24 00:49:13,138 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 01:49:42] 2025-11-24 00:49:13,139 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 01:49:42] 2025-11-24 00:49:34,318 | INFO     | [monitor] cgroup control has ended
[2025-11-24 01:49:42] 2025-11-24 00:49:35,982 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139903201765184)>', '<ExcThread(monitor, started 139902779909888)>']
[2025-11-24 01:49:42] 2025-11-24 00:49:36,273 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 01:49:42] 2025-11-24 00:49:36,274 | INFO     | [monitor] control thread has ended
[2025-11-24 01:49:42] 2025-11-24 00:49:41,008 | INFO     | all workflow threads have been joined
[2025-11-24 01:49:42] 2025-11-24 00:49:41,009 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 01:49:42] 2025-11-24 00:49:41,009 | INFO     | traces error code: 0
[2025-11-24 01:49:42] 2025-11-24 00:49:41,009 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 01:49:42] 2025-11-24 00:49:41,363 [wrapper] ==== pilot stdout END ====
[2025-11-24 01:49:42] 2025-11-24 00:49:41,382 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 01:49:42] 2025-11-24 00:49:41,454 [wrapper] pilotpid: 28672
[2025-11-24 01:49:42] 2025-11-24 00:49:41,524 [wrapper] Pilot exit status: 0
[2025-11-24 01:49:42] 2025-11-24 00:49:41,703 [wrapper] pandaids: 6892528089
[2025-11-24 01:49:42] 2025-11-24 00:49:41,844 [wrapper] cleanup supervisor_pilot 24831 28673
[2025-11-24 01:49:42] 2025-11-24 00:49:41,865 [wrapper] Test setup, not cleaning
[2025-11-24 01:49:42] 2025-11-24 00:49:41,924 [wrapper] apfmon messages muted
[2025-11-24 01:49:42] 2025-11-24 00:49:41,960 [wrapper] ==== wrapper stdout END ====
[2025-11-24 01:49:42] 2025-11-24 00:49:42,048 [wrapper] ==== wrapper stderr END ====
[2025-11-24 01:49:42]  *** Error codes and diagnostics ***
[2025-11-24 01:49:42]     "exeErrorCode": 0,
[2025-11-24 01:49:42]     "exeErrorDiag": "",
[2025-11-24 01:49:42]     "pilotErrorCode": 0,
[2025-11-24 01:49:42]     "pilotErrorDiag": "",
[2025-11-24 01:49:42]  *** Listing of results directory ***
[2025-11-24 01:49:42] total 1335980
[2025-11-24 01:49:42] -rw-r--r--. 1 boinc boinc    576529 Nov 19 08:00 pilot3.tar.gz
[2025-11-24 01:49:42] -rw-r--r--. 1 boinc boinc      5112 Nov 19 08:12 queuedata.json
[2025-11-24 01:49:42] -rwx------. 1 boinc boinc     36292 Nov 19 08:13 runpilot2-wrapper.sh
[2025-11-24 01:49:42] -rw-r--r--. 1 boinc boinc       100 Nov 22 23:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 01:49:42] -rwxr-xr-x. 1 boinc boinc      7986 Nov 22 23:43 run_atlas
[2025-11-24 01:49:42] -rw-r--r--. 1 boinc boinc       105 Nov 22 23:43 job.xml
[2025-11-24 01:49:42] -rw-r--r--. 1 boinc boinc      6391 Nov 22 23:43 init_data.xml
[2025-11-24 01:49:42] -rw-r--r--. 2 boinc boinc 411536341 Nov 22 23:43 EVNT.47493027._000149.pool.root.1
[2025-11-24 01:49:42] -rw-r--r--. 2 boinc boinc     15120 Nov 22 23:43 start_atlas.sh
[2025-11-24 01:49:42] drwxrwx--x. 2 boinc boinc        68 Nov 22 23:43 shared
[2025-11-24 01:49:42] -rw-r--r--. 2 boinc boinc    590088 Nov 22 23:43 input.tar.gz
[2025-11-24 01:49:42] -rw-r--r--. 1 boinc boinc         0 Nov 22 23:43 boinc_lockfile
[2025-11-24 01:49:42] -rw-r--r--. 1 boinc boinc      2773 Nov 22 23:43 pandaJob.out
[2025-11-24 01:49:42] -rw-------. 1 boinc boinc    989784 Nov 22 23:46 agis_schedconf.cvmfs.json
[2025-11-24 01:49:42] drwx------. 5 boinc boinc      4096 Nov 22 23:46 pilot3
[2025-11-24 01:49:42] -rw-r--r--. 1 boinc boinc       533 Nov 24 01:23 boinc_task_state.xml
[2025-11-24 01:49:42] -rw-------. 1 boinc boinc 922590964 Nov 24 01:47 HITS.47493029._001442.pool.root.1
[2025-11-24 01:49:42] -rw-------. 1 boinc boinc      1031 Nov 24 01:48 memory_monitor_summary.json
[2025-11-24 01:49:42] -rw-------. 1 boinc boinc   1526164 Nov 24 01:48 agis_ddmendpoints.agis.ALL.json
[2025-11-24 01:49:42] -rw-------. 1 boinc boinc   2578895 Nov 24 01:48 log.47493029._001442.job.log.tgz.1
[2025-11-24 01:49:42] -rw-------. 1 boinc boinc        95 Nov 24 01:48 pilot_heartbeat.json
[2025-11-24 01:49:42] -rw-------. 1 boinc boinc      8635 Nov 24 01:48 heartbeat.json
[2025-11-24 01:49:42] -rw-r--r--. 1 boinc boinc      8192 Nov 24 01:49 boinc_mmap_file
[2025-11-24 01:49:42] -rw-r--r--. 1 boinc boinc        29 Nov 24 01:49 wrapper_checkpoint.txt
[2025-11-24 01:49:42] -rw-------. 1 boinc boinc      4884 Nov 24 01:49 pilotlog.txt
[2025-11-24 01:49:42] -rw-------. 1 boinc boinc  12425064 Nov 24 01:49 log.47493029._001442.job.log.1
[2025-11-24 01:49:42] -rw-------. 1 boinc boinc       353 Nov 24 01:49 output.list
[2025-11-24 01:49:42] -rw-r--r--. 1 boinc boinc       620 Nov 24 01:49 runtime_log
[2025-11-24 01:49:42] -rw-------. 1 boinc boinc  15022080 Nov 24 01:49 result.tar.gz
[2025-11-24 01:49:42] -rw-r--r--. 1 boinc boinc      8703 Nov 24 01:49 runtime_log.err
[2025-11-24 01:49:42] -rw-------. 1 boinc boinc       662 Nov 24 01:49 6V6MDmQYrf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm9lGKDmWeFKXo.diag
[2025-11-24 01:49:42] -rw-r--r--. 1 boinc boinc     21437 Nov 24 01:49 stderr.txt
[2025-11-24 01:49:42] HITS file was successfully produced:
[2025-11-24 01:49:42] -rw-------. 1 boinc boinc 922590964 Nov 24 01:47 shared/HITS.pool.root.1
[2025-11-24 01:49:42]  *** Contents of shared directory: ***
[2025-11-24 01:49:42] total 1318128
[2025-11-24 01:49:42] -rw-r--r--. 2 boinc boinc 411536341 Nov 22 23:43 ATLAS.root_0
[2025-11-24 01:49:42] -rw-r--r--. 2 boinc boinc     15120 Nov 22 23:43 start_atlas.sh
[2025-11-24 01:49:42] -rw-r--r--. 2 boinc boinc    590088 Nov 22 23:43 input.tar.gz
[2025-11-24 01:49:42] -rw-------. 1 boinc boinc 922590964 Nov 24 01:47 HITS.pool.root.1
[2025-11-24 01:49:42] -rw-------. 1 boinc boinc  15022080 Nov 24 01:49 result.tar.gz
01:49:44 (24785): run_atlas exited; CPU time 344315.545089
01:49:44 (24785): called boinc_finish(0)

</stderr_txt>
]]>

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