Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
15:24:59 (535637): wrapper (7.7.26015): starting
15:24:59 (535637): wrapper: running run_atlas (--nthreads 12)
[2025-11-22 15:24:59] Arguments: --nthreads 12
[2025-11-22 15:24:59] Threads: 12
[2025-11-22 15:24:59] Checking for CVMFS
[2025-11-22 15:25:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 15:25:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 15:25:00] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 15:25:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 15:25:02] 2.13.0.0 2291514 5388 163560 153176 2 101 3849734 4096000 14012 130560 0 32606240 99.977 852277 583 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2025-11-22 15:25:02] CVMFS is ok
[2025-11-22 15:25:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 15:25:02] Checking for apptainer binary...
[2025-11-22 15:25:02] apptainer is not installed, using version from CVMFS
[2025-11-22 15:25:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 15:25:39] epyc7v12
[2025-11-22 15:25:39] apptainer works
[2025-11-22 15:25:39] Set ATHENA_PROC_NUMBER=12
[2025-11-22 15:25:39] Set ATHENA_CORE_NUMBER=12
[2025-11-22 15:25:39] Starting ATLAS job with PandaID=6892522723
[2025-11-22 15:25:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31419/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 01:12:05]  *** The last 200 lines of the pilot log: ***
[2025-11-23 01:12:05] 2025-11-23 01:10:39,291 | INFO     | time since job start (34783s) is within the limit (172800.0s)
[2025-11-23 01:12:05] 2025-11-23 01:10:40,739 | INFO     | monitor loop #2223: job 0:6892522723 is in state 'finished'
[2025-11-23 01:12:05] 2025-11-23 01:10:40,739 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 01:12:05] 2025-11-23 01:10:41,303 | INFO     | time since job start (34785s) is within the limit (172800.0s)
[2025-11-23 01:12:05] 2025-11-23 01:10:43,255 | INFO     | monitor loop #2224: job 0:6892522723 is in state 'finished'
[2025-11-23 01:12:05] 2025-11-23 01:10:43,255 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 01:12:05] 2025-11-23 01:10:43,315 | INFO     | time since job start (34787s) is within the limit (172800.0s)
[2025-11-23 01:12:05] 2025-11-23 01:10:45,323 | INFO     | time since job start (34789s) is within the limit (172800.0s)
[2025-11-23 01:12:05] 2025-11-23 01:10:45,763 | INFO     | monitor loop #2225: job 0:6892522723 is in state 'finished'
[2025-11-23 01:12:05] 2025-11-23 01:10:45,763 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 01:12:05] 2025-11-23 01:10:47,335 | INFO     | time since job start (34791s) is within the limit (172800.0s)
[2025-11-23 01:12:05] 2025-11-23 01:10:48,275 | INFO     | monitor loop #2226: job 0:6892522723 is in state 'finished'
[2025-11-23 01:12:05] 2025-11-23 01:10:48,275 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 01:12:05] 2025-11-23 01:10:49,347 | INFO     | time since job start (34793s) is within the limit (172800.0s)
[2025-11-23 01:12:05] 2025-11-23 01:10:50,783 | INFO     | monitor loop #2227: job 0:6892522723 is in state 'finished'
[2025-11-23 01:12:05] 2025-11-23 01:10:50,783 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 01:12:05] 2025-11-23 01:10:50,820 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 01:12:05] 2025-11-23 01:10:50,869 | INFO     | found 64 cores (64 cores per socket, 1 socket) HT, CPU MHz: 2389.784171875
[2025-11-23 01:12:05] 2025-11-23 01:10:50,931 | INFO     | using path: /opt/boinc/instance_homes/boinc_31419/slots/0/PanDA_Pilot-6892522723/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 01:12:05] 2025-11-23 01:10:50,932 | INFO     | extracted standard info from prmon json
[2025-11-23 01:12:05] 2025-11-23 01:10:50,932 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 01:12:05] 2025-11-23 01:10:50,932 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 01:12:05] 2025-11-23 01:10:50,963 | INFO     | fitting pss+swap vs Time
[2025-11-23 01:12:05] 2025-11-23 01:10:50,963 | INFO     | sum of square deviations: 53585589430.97286
[2025-11-23 01:12:05] 2025-11-23 01:10:50,988 | INFO     | sum of deviations: 624910535823.7257
[2025-11-23 01:12:05] 2025-11-23 01:10:50,988 | INFO     | mean x: 1763843123.2746859
[2025-11-23 01:12:05] 2025-11-23 01:10:50,988 | INFO     | mean y: 3096196.001795332
[2025-11-23 01:12:05] 2025-11-23 01:10:50,989 | INFO     | intersect: -20566690625.032455
[2025-11-23 01:12:05] 2025-11-23 01:10:50,989 | INFO     | chi2: 58.622388743968614
[2025-11-23 01:12:05] 2025-11-23 01:10:50,990 | INFO     | sum of square deviations: 52155676832.775444
[2025-11-23 01:12:05] 2025-11-23 01:10:51,010 | INFO     | sum of deviations: 834496597323.1647
[2025-11-23 01:12:05] 2025-11-23 01:10:51,011 | INFO     | mean x: 1763842970.786232
[2025-11-23 01:12:05] 2025-11-23 01:10:51,011 | INFO     | mean y: 3118537.9166666665
[2025-11-23 01:12:05] 2025-11-23 01:10:51,011 | INFO     | intersect: -28218564061.522144
[2025-11-23 01:12:05] 2025-11-23 01:10:51,012 | INFO     | chi2: 54.323235089835556
[2025-11-23 01:12:05] 2025-11-23 01:10:51,012 | INFO     | current chi2=54.323235089835556 (change=7.333637789666798 %)
[2025-11-23 01:12:05] 2025-11-23 01:10:51,012 | INFO     | right removable region: 551
[2025-11-23 01:12:05] 2025-11-23 01:10:51,013 | INFO     | sum of square deviations: 52155243732.775444
[2025-11-23 01:12:05] 2025-11-23 01:10:51,029 | INFO     | sum of deviations: 362642125420.214
[2025-11-23 01:12:05] 2025-11-23 01:10:51,029 | INFO     | mean x: 1763843275.786232
[2025-11-23 01:12:05] 2025-11-23 01:10:51,029 | INFO     | mean y: 3124161.0018115942
[2025-11-23 01:12:05] 2025-11-23 01:10:51,029 | INFO     | intersect: -12261105256.01664
[2025-11-23 01:12:05] 2025-11-23 01:10:51,030 | INFO     | chi2: 52.97671564261627
[2025-11-23 01:12:05] 2025-11-23 01:10:51,030 | INFO     | current chi2=52.97671564261627 (change=9.630574977095591 %)
[2025-11-23 01:12:05] 2025-11-23 01:10:51,030 | INFO     | left removable region: 10
[2025-11-23 01:12:05] 2025-11-23 01:10:51,035 | INFO     | sum of square deviations: 49099051116.20704
[2025-11-23 01:12:05] 2025-11-23 01:10:51,051 | INFO     | sum of deviations: 368602410889.4064
[2025-11-23 01:12:05] 2025-11-23 01:10:51,052 | INFO     | mean x: 1763843245.3123844
[2025-11-23 01:12:05] 2025-11-23 01:10:51,052 | INFO     | mean y: 3179252.4768946394
[2025-11-23 01:12:05] 2025-11-23 01:10:51,052 | INFO     | intersect: -13238560819.329302
[2025-11-23 01:12:05] 2025-11-23 01:10:51,053 | INFO     | chi2: 42.83967426654835
[2025-11-23 01:12:05] 2025-11-23 01:10:51,053 | INFO     | current memory leak: 7.51 B/s (using 541 data points, chi2=42.84)
[2025-11-23 01:12:05] 2025-11-23 01:10:51,054 | INFO     | could have reported an average CPU frequency of 2393 MHz (21 samples)
[2025-11-23 01:12:05] 2025-11-23 01:10:51,054 | INFO     | ..............................
[2025-11-23 01:12:05] 2025-11-23 01:10:51,054 | INFO     | . Timing measurements:
[2025-11-23 01:12:05] 2025-11-23 01:10:51,054 | INFO     | . get job = 0 s
[2025-11-23 01:12:05] 2025-11-23 01:10:51,054 | INFO     | . initial setup = 2 s
[2025-11-23 01:12:05] 2025-11-23 01:10:51,054 | INFO     | . payload setup = 209 s
[2025-11-23 01:12:05] 2025-11-23 01:10:51,059 | INFO     | . stage-in = 0 s
[2025-11-23 01:12:05] 2025-11-23 01:10:51,059 | INFO     | . payload execution = 34124 s
[2025-11-23 01:12:05] 2025-11-23 01:10:51,059 | INFO     | . stage-out = 7 s
[2025-11-23 01:12:05] 2025-11-23 01:10:51,059 | INFO     | . log creation = 3 s
[2025-11-23 01:12:05] 2025-11-23 01:10:51,059 | INFO     | ..............................
[2025-11-23 01:12:05] 2025-11-23 01:10:51,271 | INFO     | 
[2025-11-23 01:12:05] 2025-11-23 01:10:51,271 | INFO     | job summary report
[2025-11-23 01:12:05] 2025-11-23 01:10:51,271 | INFO     | --------------------------------------------------
[2025-11-23 01:12:05] 2025-11-23 01:10:51,271 | INFO     | PanDA job id: 6892522723
[2025-11-23 01:12:05] 2025-11-23 01:10:51,271 | INFO     | task id: 47493029
[2025-11-23 01:12:05] 2025-11-23 01:10:51,271 | INFO     | errors: (none)
[2025-11-23 01:12:05] 2025-11-23 01:10:51,271 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 01:12:05] 2025-11-23 01:10:51,271 | INFO     | pilot state: finished 
[2025-11-23 01:12:05] 2025-11-23 01:10:51,272 | INFO     | transexitcode: 0
[2025-11-23 01:12:05] 2025-11-23 01:10:51,272 | INFO     | exeerrorcode: 0
[2025-11-23 01:12:05] 2025-11-23 01:10:51,272 | INFO     | exeerrordiag: 
[2025-11-23 01:12:05] 2025-11-23 01:10:51,272 | INFO     | exitcode: 0
[2025-11-23 01:12:05] 2025-11-23 01:10:51,272 | INFO     | exitmsg: OK
[2025-11-23 01:12:05] 2025-11-23 01:10:51,272 | INFO     | cpuconsumptiontime: 260713 s
[2025-11-23 01:12:05] 2025-11-23 01:10:51,272 | INFO     | nevents: 1000
[2025-11-23 01:12:05] 2025-11-23 01:10:51,272 | INFO     | neventsw: 0
[2025-11-23 01:12:05] 2025-11-23 01:10:51,272 | INFO     | pid: 574227
[2025-11-23 01:12:05] 2025-11-23 01:10:51,272 | INFO     | pgrp: 574227
[2025-11-23 01:12:05] 2025-11-23 01:10:51,272 | INFO     | corecount: 12
[2025-11-23 01:12:05] 2025-11-23 01:10:51,273 | INFO     | event service: False
[2025-11-23 01:12:05] 2025-11-23 01:10:51,273 | INFO     | sizes: {0: 2297964, 1: 2298672, 2: 2298871, 13: 2298871, 24: 2298927, 34: 2298955, 45: 2299111, 56: 2299139, 67: 2299167, 78: 2299195, 88: 2299251, 99: 2299559, 11
[2025-11-23 01:12:05] 2025-11-23 01:10:51,273 | INFO     | --------------------------------------------------
[2025-11-23 01:12:05] 2025-11-23 01:10:51,273 | INFO     | 
[2025-11-23 01:12:05] 2025-11-23 01:10:51,273 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31419/slots/0
[2025-11-23 01:12:05] 2025-11-23 01:10:51,355 | INFO     | time since job start (34795s) is within the limit (172800.0s)
[2025-11-23 01:12:05] 2025-11-23 01:10:51,936 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 01:10:51,936 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 01:10:51,936 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 01:10:51,936 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 01:10:51,936 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 01:10:51,936 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 01:10:51,936 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 01:10:51,937 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 01:10:51,937 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 01:10:51,937 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 01:10:51,937 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 01:10:51,937 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 01:10:51,937 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 01:10:51,937 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 01:10:51,937 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 01:10:51,937 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 01:10:51,938 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 01:10:51,938 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 01:12:05] 2025-11-23 01:10:51,938 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 01:10:51,938 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 01:12:05] 2025-11-23 01:10:51,938 | INFO     | job 6892522723 has completed (purged errors)
[2025-11-23 01:12:05] 2025-11-23 01:10:51,938 | INFO     | overall cleanup function is called
[2025-11-23 01:12:05] 2025-11-23 01:10:52,983 | INFO     | --- collectZombieJob: --- 10, [574227]
[2025-11-23 01:12:05] 2025-11-23 01:10:52,983 | INFO     | zombie collector waiting for pid 574227
[2025-11-23 01:12:05] 2025-11-23 01:10:52,983 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 01:12:05] 2025-11-23 01:10:52,983 | INFO     | collected zombie processes
[2025-11-23 01:12:05] 2025-11-23 01:10:52,983 | INFO     | will attempt to kill all subprocesses of pid=574227
[2025-11-23 01:12:05] 2025-11-23 01:10:54,192 | INFO     | process IDs to be killed: [574227] (in reverse order)
[2025-11-23 01:12:05] 2025-11-23 01:10:59,527 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 01:12:05] 2025-11-23 01:10:59,527 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 01:12:05] 2025-11-23 01:10:59,556 | INFO     | did not find any defunct processes belonging to 574227
[2025-11-23 01:12:05] 2025-11-23 01:10:59,573 | INFO     | did not find any defunct processes belonging to 574227
[2025-11-23 01:12:05] 2025-11-23 01:10:59,584 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 01:12:05] 2025-11-23 01:10:59,585 | INFO     | ready for new job
[2025-11-23 01:12:05] 2025-11-23 01:10:59,585 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 01:12:05] 2025-11-23 01:10:59,589 | INFO     | ***************************************
[2025-11-23 01:12:05] 2025-11-23 01:10:59,589 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 01:12:05] 2025-11-23 01:10:59,589 | INFO     | ***************************************
[2025-11-23 01:12:05] 2025-11-23 01:10:59,589 | INFO     | 
[2025-11-23 01:12:05] 2025-11-23 01:10:59,599 | INFO     | architecture information:
[2025-11-23 01:12:05] 2025-11-23 01:10:59,603 | INFO     | executing command: cat /etc/os-release
[2025-11-23 01:12:05] 2025-11-23 01:10:59,871 | INFO     | cat /etc/os-release:
[2025-11-23 01:12:05] NAME="CentOS Linux"
[2025-11-23 01:12:05] VERSION="7 (Core)"
[2025-11-23 01:12:05] ID="centos"
[2025-11-23 01:12:05] ID_LIKE="rhel fedora"
[2025-11-23 01:12:05] VERSION_ID="7"
[2025-11-23 01:12:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 01:12:05] ANSI_COLOR="0;31"
[2025-11-23 01:12:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 01:12:05] HOME_URL="https://www.centos.org/"
[2025-11-23 01:12:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 01:12:05] 
[2025-11-23 01:12:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 01:12:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 01:12:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 01:12:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 01:12:05] 
[2025-11-23 01:12:05] 2025-11-23 01:10:59,872 | INFO     | ***************************************
[2025-11-23 01:12:05] 2025-11-23 01:11:00,375 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31419/slots/0
[2025-11-23 01:12:05] 2025-11-23 01:11:00,931 | INFO     | sufficient remaining disk space (326552780800 B)
[2025-11-23 01:12:05] 2025-11-23 01:11:00,932 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 01:12:05] 2025-11-23 01:11:00,932 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 01:12:05] 2025-11-23 01:11:00,932 | INFO     | update_server=False
[2025-11-23 01:12:05] 2025-11-23 01:11:00,932 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 01:12:05] 2025-11-23 01:11:00,933 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 01:12:05] 2025-11-23 01:11:00,933 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 01:12:05] 2025-11-23 01:11:00,994 | INFO     | all data control threads have been joined
[2025-11-23 01:12:05] 2025-11-23 01:11:01,319 | INFO     | all payload control threads have been joined
[2025-11-23 01:12:05] 2025-11-23 01:11:01,471 | INFO     | all job control threads have been joined
[2025-11-23 01:12:05] 2025-11-23 01:11:01,827 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 01:12:05] 2025-11-23 01:11:01,827 | INFO     | aborting loop
[2025-11-23 01:12:05] 2025-11-23 01:11:01,935 | INFO     | [job] retrieve thread has finished
[2025-11-23 01:12:05] 2025-11-23 01:11:01,935 | INFO     | [job] queue monitor thread has finished
[2025-11-23 01:12:05] 2025-11-23 01:11:01,999 | INFO     | [data] control thread has finished
[2025-11-23 01:12:05] 2025-11-23 01:11:02,079 | INFO     | [payload] validate_post thread has finished
[2025-11-23 01:12:05] 2025-11-23 01:11:02,119 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 01:12:05] 2025-11-23 01:11:02,159 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 01:12:05] 2025-11-23 01:11:02,327 | INFO     | [payload] control thread has finished
[2025-11-23 01:12:05] 2025-11-23 01:11:02,475 | INFO     | [job] control thread has finished
[2025-11-23 01:12:05] 2025-11-23 01:11:02,543 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 01:12:05] 2025-11-23 01:11:02,831 | INFO     | [job] job monitor thread has finished
[2025-11-23 01:12:05] 2025-11-23 01:11:02,911 | INFO     | [payload] failed_post thread has finished
[2025-11-23 01:12:05] 2025-11-23 01:11:02,943 | INFO     | [data] copytool_out thread has finished
[2025-11-23 01:12:05] 2025-11-23 01:11:02,995 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 01:12:05] 2025-11-23 01:11:03,231 | INFO     | [job] validate thread has finished
[2025-11-23 01:12:05] 2025-11-23 01:11:03,395 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 01:12:05] 2025-11-23 01:11:03,403 | INFO     | [data] copytool_in thread has finished
[2025-11-23 01:12:05] 2025-11-23 01:11:06,175 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 01:12:05] 2025-11-23 01:11:25,651 | INFO     | PID=546344 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-23 01:12:05] 2025-11-23 01:11:25,651 | INFO     | .. there are 16 such processes running
[2025-11-23 01:12:05] 2025-11-23 01:11:25,652 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 01:12:05] 2025-11-23 01:11:25,652 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 01:12:05] 2025-11-23 01:11:25,652 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 01:12:05] 2025-11-23 01:11:54,227 | INFO     | [monitor] cgroup control has ended
[2025-11-23 01:12:05] 2025-11-23 01:11:54,471 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140599667939136)>', '<ExcThread(monitor, started 140598564611840)>']
[2025-11-23 01:12:05] 2025-11-23 01:11:54,787 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 01:12:05] 2025-11-23 01:11:54,788 | INFO     | [monitor] control thread has ended
[2025-11-23 01:12:05] 2025-11-23 01:11:59,495 | INFO     | all workflow threads have been joined
[2025-11-23 01:12:05] 2025-11-23 01:11:59,495 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 01:12:05] 2025-11-23 01:11:59,495 | INFO     | traces error code: 0
[2025-11-23 01:12:05] 2025-11-23 01:11:59,495 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 01:12:05] 2025-11-23 01:11:59,943 [wrapper] ==== pilot stdout END ====
[2025-11-23 01:12:05] 2025-11-23 01:12:00,031 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 01:12:05] 2025-11-23 01:12:00,139 [wrapper] pilotpid: 546344
[2025-11-23 01:12:05] 2025-11-23 01:12:00,251 [wrapper] Pilot exit status: 0
[2025-11-23 01:12:05] 2025-11-23 01:12:00,807 [wrapper] pandaids: 6892522723
[2025-11-23 01:12:05] 2025-11-23 01:12:01,707 [wrapper] cleanup supervisor_pilot 1577793 546345
[2025-11-23 01:12:05] 2025-11-23 01:12:01,792 [wrapper] Test setup, not cleaning
[2025-11-23 01:12:05] 2025-11-23 01:12:01,943 [wrapper] apfmon messages muted
[2025-11-23 01:12:05] 2025-11-23 01:12:02,079 [wrapper] ==== wrapper stdout END ====
[2025-11-23 01:12:05] 2025-11-23 01:12:02,211 [wrapper] ==== wrapper stderr END ====
[2025-11-23 01:12:05]  *** Error codes and diagnostics ***
[2025-11-23 01:12:05]     "exeErrorCode": 0,
[2025-11-23 01:12:05]     "exeErrorDiag": "",
[2025-11-23 01:12:05]     "pilotErrorCode": 0,
[2025-11-23 01:12:05]     "pilotErrorDiag": "",
[2025-11-23 01:12:05]  *** Listing of results directory ***
[2025-11-23 01:12:05] total 1326172
[2025-11-23 01:12:05] -rw-r--r-- 1 boinc boinc    576529 Nov 19 07:00 pilot3.tar.gz
[2025-11-23 01:12:05] -rw-r--r-- 1 boinc boinc      5112 Nov 19 07:04 queuedata.json
[2025-11-23 01:12:05] -rwx------ 1 boinc boinc     36292 Nov 19 07:05 runpilot2-wrapper.sh
[2025-11-23 01:12:05] -rw-rw-r-- 1 boinc boinc       100 Nov 22 15:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 01:12:05] -rwxr-xr-x 1 boinc boinc      7986 Nov 22 15:24 run_atlas
[2025-11-23 01:12:05] -rw-rw-r-- 1 boinc boinc       105 Nov 22 15:24 job.xml
[2025-11-23 01:12:05] -rw-r--r-- 2 boinc boinc 409378476 Nov 22 15:24 EVNT.47493027._000052.pool.root.1
[2025-11-23 01:12:05] -rw-r--r-- 2 boinc boinc     15120 Nov 22 15:24 start_atlas.sh
[2025-11-23 01:12:05] drwxrwx--x 2 boinc boinc      4096 Nov 22 15:24 shared
[2025-11-23 01:12:05] -rw-r--r-- 2 boinc boinc    590097 Nov 22 15:24 input.tar.gz
[2025-11-23 01:12:05] -rw-rw-r-- 1 boinc boinc      6545 Nov 22 15:24 init_data.xml
[2025-11-23 01:12:05] -rw-rw-r-- 1 boinc boinc         0 Nov 22 15:24 boinc_setup_complete
[2025-11-23 01:12:05] -rw-rw-r-- 1 boinc boinc         0 Nov 22 15:24 boinc_lockfile
[2025-11-23 01:12:05] -rw-rw-r-- 1 boinc boinc      2771 Nov 22 15:25 pandaJob.out
[2025-11-23 01:12:05] -rw------- 1 boinc boinc    989768 Nov 22 15:30 agis_schedconf.cvmfs.json
[2025-11-23 01:12:05] drwx------ 5 boinc boinc      4096 Nov 22 15:30 pilot3
[2025-11-23 01:12:05] -rw-rw-r-- 1 boinc boinc       533 Nov 23 00:27 boinc_task_state.xml
[2025-11-23 01:12:05] -rw------- 1 boinc boinc 931144021 Nov 23 01:06 HITS.47493029._000475.pool.root.1
[2025-11-23 01:12:05] -rw------- 1 boinc boinc      1038 Nov 23 01:08 memory_monitor_summary.json
[2025-11-23 01:12:05] -rw------- 1 boinc boinc   1526164 Nov 23 01:08 agis_ddmendpoints.agis.ALL.json
[2025-11-23 01:12:05] -rw------- 1 boinc boinc   2239581 Nov 23 01:08 log.47493029._000475.job.log.tgz.1
[2025-11-23 01:12:05] -rw------- 1 boinc boinc      8560 Nov 23 01:10 heartbeat.json
[2025-11-23 01:12:05] -rw------- 1 boinc boinc        95 Nov 23 01:11 pilot_heartbeat.json
[2025-11-23 01:12:05] -rw------- 1 boinc boinc      4847 Nov 23 01:11 pilotlog.txt
[2025-11-23 01:12:05] -rw------- 1 boinc boinc   4538123 Nov 23 01:12 log.47493029._000475.job.log.1
[2025-11-23 01:12:05] -rw-rw-r-- 1 boinc boinc      8192 Nov 23 01:12 boinc_mmap_file
[2025-11-23 01:12:05] -rw-rw-r-- 1 boinc boinc        29 Nov 23 01:12 wrapper_checkpoint.txt
[2025-11-23 01:12:05] -rw------- 1 boinc boinc       353 Nov 23 01:12 output.list
[2025-11-23 01:12:05] -rw-rw-r-- 1 boinc boinc       620 Nov 23 01:12 runtime_log
[2025-11-23 01:12:05] -rw------- 1 boinc boinc   6799360 Nov 23 01:12 result.tar.gz
[2025-11-23 01:12:05] -rw------- 1 boinc boinc       660 Nov 23 01:12 zGLNDm6Qrf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpcGKDmHMiHjm.diag
[2025-11-23 01:12:05] -rw-rw-r-- 1 boinc boinc      9008 Nov 23 01:12 runtime_log.err
[2025-11-23 01:12:05] -rw-rw-r-- 1 boinc boinc     21595 Nov 23 01:12 stderr.txt
[2025-11-23 01:12:05] HITS file was successfully produced:
[2025-11-23 01:12:05] -rw------- 1 boinc boinc 931144021 Nov 23 01:06 shared/HITS.pool.root.1
[2025-11-23 01:12:05]  *** Contents of shared directory: ***
[2025-11-23 01:12:05] total 1316352
[2025-11-23 01:12:05] -rw-r--r-- 2 boinc boinc 409378476 Nov 22 15:24 ATLAS.root_0
[2025-11-23 01:12:05] -rw-r--r-- 2 boinc boinc     15120 Nov 22 15:24 start_atlas.sh
[2025-11-23 01:12:05] -rw-r--r-- 2 boinc boinc    590097 Nov 22 15:24 input.tar.gz
[2025-11-23 01:12:05] -rw------- 1 boinc boinc 931144021 Nov 23 01:06 HITS.pool.root.1
[2025-11-23 01:12:05] -rw------- 1 boinc boinc   6799360 Nov 23 01:12 result.tar.gz
01:12:07 (535637): run_atlas exited; CPU time 261881.625678
01:12:07 (535637): called boinc_finish(0)

</stderr_txt>
]]>

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