Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:43:32 (14175): wrapper (7.7.26015): starting
13:43:32 (14175): wrapper: running run_atlas (--nthreads 8)
[2025-11-19 13:43:32] Arguments: --nthreads 8
[2025-11-19 13:43:32] Threads: 8
[2025-11-19 13:43:32] Checking for CVMFS
[2025-11-19 13:43:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 13:43:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 13:43:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 13:43:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 13:43:32] 2.11.2.0 3869 93689 139320 153053 1 81 10792842 18432000 1569 130560 0 69005611 99.983 3529793 32665 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-19 13:43:32] CVMFS is ok
[2025-11-19 13:43:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-19 13:43:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-19 13:43:32] Further information can be found at the LHC@home message board.
[2025-11-19 13:43:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 13:43:32] Checking for apptainer binary...
[2025-11-19 13:43:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 13:43:32] Running /usr/bin/apptainer --version
[2025-11-19 13:43:32] apptainer version 1.3.2-1.el7
[2025-11-19 13:43:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 13:43:33] c-206-12.aglt2.org
[2025-11-19 13:43:33] apptainer works
[2025-11-19 13:43:33] Set ATHENA_PROC_NUMBER=8
[2025-11-19 13:43:33] Set ATHENA_CORE_NUMBER=8
[2025-11-19 13:43:33] Starting ATLAS job with PandaID=6892547571
[2025-11-19 13:43:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 08:29:42]  *** The last 200 lines of the pilot log: ***
[2025-11-20 08:29:42] 2025-11-20 13:28:38,650 | INFO     | sum of deviations: 1953841341637.9583
[2025-11-20 08:29:42] 2025-11-20 13:28:38,651 | INFO     | mean x: 1763611552.0931284
[2025-11-20 08:29:42] 2025-11-20 13:28:38,651 | INFO     | mean y: 2864958.165461121
[2025-11-20 08:29:42] 2025-11-20 13:28:38,651 | INFO     | intersect: -8211041660.288793
[2025-11-20 08:29:42] 2025-11-20 13:28:38,653 | INFO     | chi2: 5.53452654915548
[2025-11-20 08:29:42] 2025-11-20 13:28:38,654 | INFO     | sum of square deviations: 413846453389.1411
[2025-11-20 08:29:42] 2025-11-20 13:28:38,676 | INFO     | sum of deviations: 2293906732549.1855
[2025-11-20 08:29:42] 2025-11-20 13:28:38,676 | INFO     | mean x: 1763611399.595822
[2025-11-20 08:29:42] 2025-11-20 13:28:38,676 | INFO     | mean y: 2874112.8655767483
[2025-11-20 08:29:42] 2025-11-20 13:28:38,676 | INFO     | intersect: -9772635692.770706
[2025-11-20 08:29:42] 2025-11-20 13:28:38,677 | INFO     | chi2: 2.7450283450404402
[2025-11-20 08:29:42] 2025-11-20 13:28:38,677 | INFO     | current chi2=2.7450283450404402 (change=50.40174944215766 %)
[2025-11-20 08:29:42] 2025-11-20 13:28:38,678 | INFO     | sum of square deviations: 408233971487.35767
[2025-11-20 08:29:42] 2025-11-20 13:28:38,710 | INFO     | sum of deviations: 2460268740774.0776
[2025-11-20 08:29:42] 2025-11-20 13:28:38,710 | INFO     | mean x: 1763611247.09854
[2025-11-20 08:29:42] 2025-11-20 13:28:38,710 | INFO     | mean y: 2878631.61040146
[2025-11-20 08:29:42] 2025-11-20 13:28:38,710 | INFO     | intersect: -10625726347.797825
[2025-11-20 08:29:42] 2025-11-20 13:28:38,712 | INFO     | chi2: 1.9870491435450284
[2025-11-20 08:29:42] 2025-11-20 13:28:38,712 | INFO     | current chi2=1.9870491435450284 (change=27.61280053318521 %)
[2025-11-20 08:29:42] 2025-11-20 13:28:38,714 | INFO     | sum of square deviations: 402672333817.95856
[2025-11-20 08:29:42] 2025-11-20 13:28:38,757 | INFO     | sum of deviations: 2443667201496.893
[2025-11-20 08:29:42] 2025-11-20 13:28:38,757 | INFO     | mean x: 1763611094.59945
[2025-11-20 08:29:42] 2025-11-20 13:28:38,757 | INFO     | mean y: 2878175.8212648947
[2025-11-20 08:29:42] 2025-11-20 13:28:38,758 | INFO     | intersect: -10699815369.588898
[2025-11-20 08:29:42] 2025-11-20 13:28:38,759 | INFO     | chi2: 1.9792969288715427
[2025-11-20 08:29:42] 2025-11-20 13:28:38,759 | INFO     | current chi2=1.9792969288715427 (change=0.39013703806314354 %)
[2025-11-20 08:29:42] 2025-11-20 13:28:38,760 | INFO     | right removable region: 1090
[2025-11-20 08:29:42] 2025-11-20 13:28:38,761 | INFO     | sum of square deviations: 413846053229.1412
[2025-11-20 08:29:42] 2025-11-20 13:28:38,804 | INFO     | sum of deviations: 1709276464606.6367
[2025-11-20 08:29:42] 2025-11-20 13:28:38,804 | INFO     | mean x: 1763611704.595822
[2025-11-20 08:29:42] 2025-11-20 13:28:38,804 | INFO     | mean y: 2871532.7475022706
[2025-11-20 08:29:42] 2025-11-20 13:28:38,805 | INFO     | intersect: -7281237995.056407
[2025-11-20 08:29:42] 2025-11-20 13:28:38,806 | INFO     | chi2: 3.848811493292594
[2025-11-20 08:29:42] 2025-11-20 13:28:38,807 | INFO     | current chi2=3.848811493292594 (change=30.458161884147277 %)
[2025-11-20 08:29:42] 2025-11-20 13:28:38,808 | INFO     | sum of square deviations: 408233238084.5541
[2025-11-20 08:29:42] 2025-11-20 13:28:38,851 | INFO     | sum of deviations: 1633849735948.2666
[2025-11-20 08:29:42] 2025-11-20 13:28:38,851 | INFO     | mean x: 1763611857.0976276
[2025-11-20 08:29:42] 2025-11-20 13:28:38,852 | INFO     | mean y: 2873581.7171532847
[2025-11-20 08:29:42] 2025-11-20 13:28:38,852 | INFO     | intersect: -7055534451.28425
[2025-11-20 08:29:42] 2025-11-20 13:28:38,853 | INFO     | chi2: 3.789901767942313
[2025-11-20 08:29:42] 2025-11-20 13:28:38,854 | INFO     | current chi2=3.789901767942313 (change=1.5305952357745836 %)
[2025-11-20 08:29:42] 2025-11-20 13:28:38,854 | INFO     | left removable region: 20
[2025-11-20 08:29:42] 2025-11-20 13:28:38,855 | INFO     | sum of square deviations: 379864373879.4851
[2025-11-20 08:29:42] 2025-11-20 13:28:38,883 | INFO     | sum of deviations: 2014753512373.5696
[2025-11-20 08:29:42] 2025-11-20 13:28:38,883 | INFO     | mean x: 1763611674.1037383
[2025-11-20 08:29:42] 2025-11-20 13:28:38,883 | INFO     | mean y: 2889901.8327102805
[2025-11-20 08:29:42] 2025-11-20 13:28:38,883 | INFO     | intersect: -9351087620.657545
[2025-11-20 08:29:42] 2025-11-20 13:28:38,884 | INFO     | chi2: 0.19846990795553063
[2025-11-20 08:29:42] 2025-11-20 13:28:38,884 | INFO     | current memory leak: 5.30 B/s (using 1070 data points, chi2=0.20)
[2025-11-20 08:29:42] 2025-11-20 13:28:38,885 | INFO     | could have reported an average CPU frequency of 2604 MHz (40 samples)
[2025-11-20 08:29:42] 2025-11-20 13:28:38,885 | INFO     | ..............................
[2025-11-20 08:29:42] 2025-11-20 13:28:38,885 | INFO     | . Timing measurements:
[2025-11-20 08:29:42] 2025-11-20 13:28:38,886 | INFO     | . get job = 0 s
[2025-11-20 08:29:42] 2025-11-20 13:28:38,886 | INFO     | . initial setup = 2 s
[2025-11-20 08:29:42] 2025-11-20 13:28:38,886 | INFO     | . payload setup = 5 s
[2025-11-20 08:29:42] 2025-11-20 13:28:38,886 | INFO     | . stage-in = 0 s
[2025-11-20 08:29:42] 2025-11-20 13:28:38,886 | INFO     | . payload execution = 67460 s
[2025-11-20 08:29:42] 2025-11-20 13:28:38,886 | INFO     | . stage-out = 4 s
[2025-11-20 08:29:42] 2025-11-20 13:28:38,886 | INFO     | . log creation = 0 s
[2025-11-20 08:29:42] 2025-11-20 13:28:38,886 | INFO     | ..............................
[2025-11-20 08:29:42] 2025-11-20 13:28:39,259 | INFO     | 
[2025-11-20 08:29:42] 2025-11-20 13:28:39,259 | INFO     | job summary report
[2025-11-20 08:29:42] 2025-11-20 13:28:39,260 | INFO     | --------------------------------------------------
[2025-11-20 08:29:42] 2025-11-20 13:28:39,260 | INFO     | PanDA job id: 6892547571
[2025-11-20 08:29:42] 2025-11-20 13:28:39,260 | INFO     | task id: 47493029
[2025-11-20 08:29:42] 2025-11-20 13:28:39,260 | INFO     | errors: (none)
[2025-11-20 08:29:42] 2025-11-20 13:28:39,260 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 08:29:42] 2025-11-20 13:28:39,260 | INFO     | pilot state: finished 
[2025-11-20 08:29:42] 2025-11-20 13:28:39,261 | INFO     | transexitcode: 0
[2025-11-20 08:29:42] 2025-11-20 13:28:39,261 | INFO     | exeerrorcode: 0
[2025-11-20 08:29:42] 2025-11-20 13:28:39,261 | INFO     | exeerrordiag: 
[2025-11-20 08:29:42] 2025-11-20 13:28:39,261 | INFO     | exitcode: 0
[2025-11-20 08:29:42] 2025-11-20 13:28:39,261 | INFO     | exitmsg: OK
[2025-11-20 08:29:42] 2025-11-20 13:28:39,261 | INFO     | cpuconsumptiontime: 526741 s
[2025-11-20 08:29:42] 2025-11-20 13:28:39,262 | INFO     | nevents: 1000
[2025-11-20 08:29:42] 2025-11-20 13:28:39,262 | INFO     | neventsw: 0
[2025-11-20 08:29:42] 2025-11-20 13:28:39,262 | INFO     | pid: 24496
[2025-11-20 08:29:42] 2025-11-20 13:28:39,262 | INFO     | pgrp: 24496
[2025-11-20 08:29:42] 2025-11-20 13:28:39,262 | INFO     | corecount: 8
[2025-11-20 08:29:42] 2025-11-20 13:28:39,262 | INFO     | event service: False
[2025-11-20 08:29:42] 2025-11-20 13:28:39,263 | INFO     | sizes: {0: 2297200, 3: 2297462, 11: 2297490, 67470: 2353149, 67475: 2363739, 67476: 2363795, 67480: 2364169}
[2025-11-20 08:29:42] 2025-11-20 13:28:39,263 | INFO     | --------------------------------------------------
[2025-11-20 08:29:42] 2025-11-20 13:28:39,263 | INFO     | 
[2025-11-20 08:29:42] 2025-11-20 13:28:39,263 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-20 08:29:42] 2025-11-20 13:28:39,281 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 08:29:42] 2025-11-20 13:28:39,281 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 08:29:42] 2025-11-20 13:28:39,282 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 08:29:42] 2025-11-20 13:28:39,282 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 08:29:42] 2025-11-20 13:28:39,282 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 08:29:42] 2025-11-20 13:28:39,282 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 08:29:42] 2025-11-20 13:28:39,282 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 08:29:42] 2025-11-20 13:28:39,283 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 08:29:42] 2025-11-20 13:28:39,283 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 08:29:42] 2025-11-20 13:28:39,283 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 08:29:42] 2025-11-20 13:28:39,283 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 08:29:42] 2025-11-20 13:28:39,283 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 08:29:42] 2025-11-20 13:28:39,283 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 08:29:42] 2025-11-20 13:28:39,284 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 08:29:42] 2025-11-20 13:28:39,284 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 08:29:42] 2025-11-20 13:28:39,284 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 08:29:42] 2025-11-20 13:28:39,284 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 08:29:42] 2025-11-20 13:28:39,284 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 08:29:42] 2025-11-20 13:28:39,284 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 08:29:42] 2025-11-20 13:28:39,285 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 08:29:42] 2025-11-20 13:28:39,285 | INFO     | job 6892547571 has completed (purged errors)
[2025-11-20 08:29:42] 2025-11-20 13:28:39,285 | INFO     | overall cleanup function is called
[2025-11-20 08:29:42] 2025-11-20 13:28:40,302 | INFO     | --- collectZombieJob: --- 10, [24496]
[2025-11-20 08:29:42] 2025-11-20 13:28:40,303 | INFO     | zombie collector waiting for pid 24496
[2025-11-20 08:29:42] 2025-11-20 13:28:40,303 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 08:29:42] 2025-11-20 13:28:40,303 | INFO     | collected zombie processes
[2025-11-20 08:29:42] 2025-11-20 13:28:40,304 | INFO     | will attempt to kill all subprocesses of pid=24496
[2025-11-20 08:29:42] 2025-11-20 13:28:40,452 | INFO     | process IDs to be killed: [24496] (in reverse order)
[2025-11-20 08:29:42] 2025-11-20 13:28:40,504 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 08:29:42] 2025-11-20 13:28:40,504 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 08:29:42] 2025-11-20 13:28:40,510 | INFO     | did not find any defunct processes belonging to 24496
[2025-11-20 08:29:42] 2025-11-20 13:28:40,514 | INFO     | did not find any defunct processes belonging to 24496
[2025-11-20 08:29:42] 2025-11-20 13:28:40,516 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 08:29:42] 2025-11-20 13:28:40,517 | INFO     | ready for new job
[2025-11-20 08:29:42] 2025-11-20 13:28:40,517 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 08:29:42] 2025-11-20 13:28:40,522 | INFO     | ***************************************
[2025-11-20 08:29:42] 2025-11-20 13:28:40,522 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 08:29:42] 2025-11-20 13:28:40,522 | INFO     | ***************************************
[2025-11-20 08:29:42] 2025-11-20 13:28:40,523 | INFO     | 
[2025-11-20 08:29:42] 2025-11-20 13:28:40,524 | INFO     | architecture information:
[2025-11-20 08:29:42] 2025-11-20 13:28:40,524 | INFO     | executing command: cat /etc/os-release
[2025-11-20 08:29:42] 2025-11-20 13:28:40,538 | INFO     | cat /etc/os-release:
[2025-11-20 08:29:42] NAME="CentOS Linux"
[2025-11-20 08:29:42] VERSION="7 (Core)"
[2025-11-20 08:29:42] ID="centos"
[2025-11-20 08:29:42] ID_LIKE="rhel fedora"
[2025-11-20 08:29:42] VERSION_ID="7"
[2025-11-20 08:29:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 08:29:42] ANSI_COLOR="0;31"
[2025-11-20 08:29:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 08:29:42] HOME_URL="https://www.centos.org/"
[2025-11-20 08:29:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 08:29:42] 
[2025-11-20 08:29:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 08:29:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 08:29:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 08:29:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 08:29:42] 
[2025-11-20 08:29:42] 2025-11-20 13:28:40,538 | INFO     | ***************************************
[2025-11-20 08:29:42] 2025-11-20 13:28:41,041 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-20 08:29:42] 2025-11-20 13:28:41,076 | INFO     | sufficient remaining disk space (25559040000 B)
[2025-11-20 08:29:42] 2025-11-20 13:28:41,077 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 08:29:42] 2025-11-20 13:28:41,077 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 08:29:42] 2025-11-20 13:28:41,077 | INFO     | update_server=False
[2025-11-20 08:29:42] 2025-11-20 13:28:41,077 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 08:29:42] 2025-11-20 13:28:41,110 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 08:29:42] 2025-11-20 13:28:41,110 | INFO     | all data control threads have been joined
[2025-11-20 08:29:42] 2025-11-20 13:28:41,121 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-20 08:29:42] 2025-11-20 13:28:41,122 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-20 08:29:42] 2025-11-20 13:28:41,122 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 08:29:42] 2025-11-20 13:28:41,122 | INFO     | will abort loop
[2025-11-20 08:29:42] 2025-11-20 13:28:41,405 | INFO     | all payload control threads have been joined
[2025-11-20 08:29:42] 2025-11-20 13:28:41,821 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 08:29:42] 2025-11-20 13:28:42,083 | INFO     | [job] retrieve thread has finished
[2025-11-20 08:29:42] 2025-11-20 13:28:42,116 | INFO     | [data] control thread has finished
[2025-11-20 08:29:42] 2025-11-20 13:28:42,127 | INFO     | [job] job monitor thread has finished
[2025-11-20 08:29:42] 2025-11-20 13:28:42,389 | INFO     | [job] validate thread has finished
[2025-11-20 08:29:42] 2025-11-20 13:28:42,411 | INFO     | [payload] control thread has finished
[2025-11-20 08:29:42] 2025-11-20 13:28:42,553 | INFO     | all job control threads have been joined
[2025-11-20 08:29:42] 2025-11-20 13:28:42,672 | INFO     | [payload] failed_post thread has finished
[2025-11-20 08:29:42] 2025-11-20 13:28:42,794 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 08:29:42] 2025-11-20 13:28:42,876 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 08:29:42] 2025-11-20 13:28:43,262 | INFO     | [payload] validate_post thread has finished
[2025-11-20 08:29:42] 2025-11-20 13:28:43,282 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 08:29:42] 2025-11-20 13:28:43,560 | INFO     | [job] control thread has finished
[2025-11-20 08:29:42] 2025-11-20 13:28:43,562 | INFO     | [data] copytool_in thread has finished
[2025-11-20 08:29:42] 2025-11-20 13:28:43,827 | INFO     | [data] copytool_out thread has finished
[2025-11-20 08:29:42] 2025-11-20 13:28:43,996 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 08:29:42] 2025-11-20 13:28:45,002 | INFO     | [job] queue monitor thread has finished
[2025-11-20 08:29:42] 2025-11-20 13:28:45,116 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 08:29:42] 2025-11-20 13:28:48,570 [wrapper] supervise_pilot (15 min periods counter: 76)
[2025-11-20 08:29:42] 2025-11-20 13:28:51,779 | INFO     | job.realtimelogging is not enabled
[2025-11-20 08:29:42] 2025-11-20 13:28:52,785 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 08:29:42] 2025-11-20 13:29:10,686 | INFO     | PID=17950 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-20 08:29:42] 2025-11-20 13:29:10,686 | INFO     | .. there are 3 such processes running
[2025-11-20 08:29:42] 2025-11-20 13:29:10,687 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 08:29:42] 2025-11-20 13:29:10,687 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 08:29:42] 2025-11-20 13:29:10,687 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 08:29:42] 2025-11-20 13:29:36,413 | INFO     | [monitor] cgroup control has ended
[2025-11-20 08:29:42] 2025-11-20 13:29:36,971 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140378894853952)>', '<ExcThread(monitor, started 140378170709760)>']
[2025-11-20 08:29:42] 2025-11-20 13:29:37,827 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 08:29:42] 2025-11-20 13:29:37,827 | INFO     | [monitor] control thread has ended
[2025-11-20 08:29:42] 2025-11-20 13:29:41,996 | INFO     | all workflow threads have been joined
[2025-11-20 08:29:42] 2025-11-20 13:29:41,997 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 08:29:42] 2025-11-20 13:29:41,997 | INFO     | traces error code: 0
[2025-11-20 08:29:42] 2025-11-20 13:29:41,997 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 08:29:42] 2025-11-20 13:29:42,132 [wrapper] ==== pilot stdout END ====
[2025-11-20 08:29:42] 2025-11-20 13:29:42,134 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 08:29:42] 2025-11-20 13:29:42,140 [wrapper] pilotpid: 17950
[2025-11-20 08:29:42] 2025-11-20 13:29:42,143 [wrapper] Pilot exit status: 0
[2025-11-20 08:29:42] 2025-11-20 13:29:42,151 [wrapper] pandaids: 6892547571
[2025-11-20 08:29:42] 2025-11-20 13:29:42,181 [wrapper] cleanup supervisor_pilot 16410 17951
[2025-11-20 08:29:42] 2025-11-20 13:29:42,192 [wrapper] Test setup, not cleaning
[2025-11-20 08:29:42] 2025-11-20 13:29:42,197 [wrapper] apfmon messages muted
[2025-11-20 08:29:42] 2025-11-20 13:29:42,200 [wrapper] ==== wrapper stdout END ====
[2025-11-20 08:29:42] 2025-11-20 13:29:42,203 [wrapper] ==== wrapper stderr END ====
[2025-11-20 08:29:42]  *** Error codes and diagnostics ***
[2025-11-20 08:29:42]     "exeErrorCode": 0,
[2025-11-20 08:29:42]     "exeErrorDiag": "",
[2025-11-20 08:29:42]     "pilotErrorCode": 0,
[2025-11-20 08:29:42]     "pilotErrorDiag": "",
[2025-11-20 08:29:42]  *** Listing of results directory ***
[2025-11-20 08:29:42] total 1308180
[2025-11-20 08:29:42] -rw-r--r-- 1 boincer umatlas    576529 Nov 19 03:32 pilot3.tar.gz
[2025-11-20 08:29:42] -rw-r--r-- 1 boincer umatlas      5112 Nov 19 03:33 queuedata.json
[2025-11-20 08:29:42] -rwx------ 1 boincer umatlas     36292 Nov 19 03:33 runpilot2-wrapper.sh
[2025-11-20 08:29:42] -rw-r--r-- 1 boincer umatlas       100 Nov 19 13:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 08:29:42] -rwxr-xr-x 1 boincer umatlas      7986 Nov 19 13:43 run_atlas
[2025-11-20 08:29:42] -rw-r--r-- 1 boincer umatlas       105 Nov 19 13:43 job.xml
[2025-11-20 08:29:42] -rw-r--r-- 2 boincer umatlas 408127054 Nov 19 13:43 EVNT.47493027._000315.pool.root.1
[2025-11-20 08:29:42] -rw-r--r-- 2 boincer umatlas     15120 Nov 19 13:43 start_atlas.sh
[2025-11-20 08:29:42] drwxrwx--x 2 boincer umatlas      4096 Nov 19 13:43 shared
[2025-11-20 08:29:42] -rw-r--r-- 2 boincer umatlas    590101 Nov 19 13:43 input.tar.gz
[2025-11-20 08:29:42] -rw-r--r-- 1 boincer umatlas         0 Nov 19 13:43 boinc_lockfile
[2025-11-20 08:29:42] -rw-r--r-- 1 boincer umatlas      2773 Nov 19 13:43 pandaJob.out
[2025-11-20 08:29:42] -rw------- 1 boincer umatlas    989434 Nov 19 13:43 agis_schedconf.cvmfs.json
[2025-11-20 08:29:42] drwx------ 5 boincer umatlas      4096 Nov 19 13:43 pilot3
[2025-11-20 08:29:42] -rw-r--r-- 1 boincer umatlas       533 Nov 20 08:16 boinc_task_state.xml
[2025-11-20 08:29:42] -rw-r--r-- 1 boincer umatlas      5953 Nov 20 08:18 init_data.xml
[2025-11-20 08:29:42] -rw------- 1 boincer umatlas 904298853 Nov 20 08:27 HITS.47493029._003107.pool.root.1
[2025-11-20 08:29:42] -rw------- 1 boincer umatlas      1068 Nov 20 08:28 memory_monitor_summary.json
[2025-11-20 08:29:42] -rw------- 1 boincer umatlas   1526164 Nov 20 08:28 agis_ddmendpoints.agis.ALL.json
[2025-11-20 08:29:42] -rw------- 1 boincer umatlas   2275465 Nov 20 08:28 log.47493029._003107.job.log.tgz.1
[2025-11-20 08:29:42] -rw------- 1 boincer umatlas      8660 Nov 20 08:28 heartbeat.json
[2025-11-20 08:29:42] -rw------- 1 boincer umatlas        95 Nov 20 08:29 pilot_heartbeat.json
[2025-11-20 08:29:42] -rw-r--r-- 1 boincer umatlas      8192 Nov 20 08:29 boinc_mmap_file
[2025-11-20 08:29:42] -rw-r--r-- 1 boincer umatlas        29 Nov 20 08:29 wrapper_checkpoint.txt
[2025-11-20 08:29:42] -rw------- 1 boincer umatlas      5079 Nov 20 08:29 pilotlog.txt
[2025-11-20 08:29:42] -rw------- 1 boincer umatlas   9334858 Nov 20 08:29 log.47493029._003107.job.log.1
[2025-11-20 08:29:42] -rw------- 1 boincer umatlas       353 Nov 20 08:29 output.list
[2025-11-20 08:29:42] -rw-r--r-- 1 boincer umatlas       620 Nov 20 08:29 runtime_log
[2025-11-20 08:29:42] -rw------- 1 boincer umatlas  11632640 Nov 20 08:29 result.tar.gz
[2025-11-20 08:29:42] -rw------- 1 boincer umatlas       668 Nov 20 08:29 zsMODmXosf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDma3GKDmn6eiNo.diag
[2025-11-20 08:29:42] -rw-r--r-- 1 boincer umatlas      8704 Nov 20 08:29 runtime_log.err
[2025-11-20 08:29:42] -rw-r--r-- 1 boincer umatlas     21118 Nov 20 08:29 stderr.txt
[2025-11-20 08:29:42] HITS file was successfully produced:
[2025-11-20 08:29:42] -rw------- 1 boincer umatlas 904298853 Nov 20 08:27 shared/HITS.pool.root.1
[2025-11-20 08:29:42]  *** Contents of shared directory: ***
[2025-11-20 08:29:42] total 1293636
[2025-11-20 08:29:42] -rw-r--r-- 2 boincer umatlas 408127054 Nov 19 13:43 ATLAS.root_0
[2025-11-20 08:29:42] -rw-r--r-- 2 boincer umatlas     15120 Nov 19 13:43 start_atlas.sh
[2025-11-20 08:29:42] -rw-r--r-- 2 boincer umatlas    590101 Nov 19 13:43 input.tar.gz
[2025-11-20 08:29:42] -rw------- 1 boincer umatlas 904298853 Nov 20 08:27 HITS.pool.root.1
[2025-11-20 08:29:42] -rw------- 1 boincer umatlas  11632640 Nov 20 08:29 result.tar.gz
08:29:43 (14175): run_atlas exited; CPU time 526399.430411
08:29:43 (14175): called boinc_finish(0)

</stderr_txt>
]]>

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