Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
05:01:06 (2866352): wrapper (7.7.26015): starting
05:01:06 (2866352): wrapper: running run_atlas (--nthreads 4)
[2025-11-21 05:01:06] Arguments: --nthreads 4
[2025-11-21 05:01:06] Threads: 4
[2025-11-21 05:01:06] Checking for CVMFS
[2025-11-21 05:01:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 05:01:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 05:01:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 05:01:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 05:01:06] 2.12.7.0 245311 2498 46128 153106 0 90 5859964 6144000 3901 130560 0 7339761 99.996 59316 506 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-21 05:01:06] CVMFS is ok
[2025-11-21 05:01:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 05:01:06] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-21 05:01:06] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-21 05:01:06] Further information can be found at the LHC@home message board.
[2025-11-21 05:01:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 05:01:06] Checking for apptainer binary...
[2025-11-21 05:01:06] apptainer is not installed, using version from CVMFS
[2025-11-21 05:01:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 05:01:06] biggy
[2025-11-21 05:01:06] apptainer works
[2025-11-21 05:01:06] Set ATHENA_PROC_NUMBER=4
[2025-11-21 05:01:06] Set ATHENA_CORE_NUMBER=4
[2025-11-21 05:01:06] Starting ATLAS job with PandaID=6891582193
[2025-11-21 05:01:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/single_8TB/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 11:29:54]  *** The last 200 lines of the pilot log: ***
[2025-11-21 11:29:54] 2025-11-21 10:29:17,872 | INFO     | using path: /single_8TB/boinc-client/slots/3/PanDA_Pilot-6891582193/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 11:29:54] 2025-11-21 10:29:18,009 | INFO     | number of running child processes to parent process 2891408: 1
[2025-11-21 11:29:54] 2025-11-21 10:29:18,009 | INFO     | maximum number of monitored processes: 9
[2025-11-21 11:29:54] 2025-11-21 10:29:19,453 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-21 11:29:54] 2025-11-21 10:29:19,455 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 5179.66021875
[2025-11-21 11:29:54] 2025-11-21 10:29:19,458 | INFO     | using path: /single_8TB/boinc-client/slots/3/PanDA_Pilot-6891582193/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 11:29:54] 2025-11-21 10:29:19,459 | INFO     | extracted standard info from prmon json
[2025-11-21 11:29:54] 2025-11-21 10:29:19,459 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 11:29:54] 2025-11-21 10:29:19,459 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 11:29:54] 2025-11-21 10:29:19,462 | INFO     | fitting pss+swap vs Time
[2025-11-21 11:29:54] 2025-11-21 10:29:19,462 | INFO     | sum of square deviations: 17284846875.5
[2025-11-21 11:29:54] 2025-11-21 10:29:19,464 | INFO     | sum of deviations: 136475979753.49997
[2025-11-21 11:29:54] 2025-11-21 10:29:19,464 | INFO     | mean x: 1763709308.5
[2025-11-21 11:29:54] 2025-11-21 10:29:19,464 | INFO     | mean y: 2247360.6361256544
[2025-11-21 11:29:54] 2025-11-21 10:29:19,464 | INFO     | intersect: -13923473683.447037
[2025-11-21 11:29:54] 2025-11-21 10:29:19,465 | INFO     | chi2: 2.3843613691039875
[2025-11-21 11:29:54] 2025-11-21 10:29:19,465 | INFO     | sum of square deviations: 16614964548.0
[2025-11-21 11:29:54] 2025-11-21 10:29:19,466 | INFO     | sum of deviations: 173995143522.00003
[2025-11-21 11:29:54] 2025-11-21 10:29:19,467 | INFO     | mean x: 1763709156.0
[2025-11-21 11:29:54] 2025-11-21 10:29:19,467 | INFO     | mean y: 2255839.151193634
[2025-11-21 11:29:54] 2025-11-21 10:29:19,467 | INFO     | intersect: -18467649819.85458
[2025-11-21 11:29:54] 2025-11-21 10:29:19,467 | INFO     | chi2: 1.4655742286548563
[2025-11-21 11:29:54] 2025-11-21 10:29:19,467 | INFO     | current chi2=1.4655742286548563 (change=38.53388804040219 %)
[2025-11-21 11:29:54] 2025-11-21 10:29:19,467 | INFO     | sum of square deviations: 15962617433.0
[2025-11-21 11:29:54] 2025-11-21 10:29:19,469 | INFO     | sum of deviations: 168187418342.5
[2025-11-21 11:29:54] 2025-11-21 10:29:19,469 | INFO     | mean x: 1763709003.5
[2025-11-21 11:29:54] 2025-11-21 10:29:19,469 | INFO     | mean y: 2254485.5134408604
[2025-11-21 11:29:54] 2025-11-21 10:29:19,469 | INFO     | intersect: -18580767080.414
[2025-11-21 11:29:54] 2025-11-21 10:29:19,469 | INFO     | chi2: 1.4638510224647188
[2025-11-21 11:29:54] 2025-11-21 10:29:19,469 | INFO     | current chi2=1.4638510224647188 (change=0.11757890910234924 %)
[2025-11-21 11:29:54] 2025-11-21 10:29:19,469 | INFO     | right removable region: 371
[2025-11-21 11:29:54] 2025-11-21 10:29:19,469 | INFO     | sum of square deviations: 16614964548.0
[2025-11-21 11:29:54] 2025-11-21 10:29:19,471 | INFO     | sum of deviations: 84488832935.0
[2025-11-21 11:29:54] 2025-11-21 10:29:19,471 | INFO     | mean x: 1763709461.0
[2025-11-21 11:29:54] 2025-11-21 10:29:19,471 | INFO     | mean y: 2259122.4827586208
[2025-11-21 11:29:54] 2025-11-21 10:29:19,471 | INFO     | intersect: -8966388000.766455
[2025-11-21 11:29:54] 2025-11-21 10:29:19,472 | INFO     | chi2: 0.9628206573851115
[2025-11-21 11:29:54] 2025-11-21 10:29:19,472 | INFO     | current chi2=0.9628206573851115 (change=59.619348398228446 %)
[2025-11-21 11:29:54] 2025-11-21 10:29:19,472 | INFO     | sum of square deviations: 15962617433.0
[2025-11-21 11:29:54] 2025-11-21 10:29:19,473 | INFO     | sum of deviations: 75412286847.50009
[2025-11-21 11:29:54] 2025-11-21 10:29:19,474 | INFO     | mean x: 1763709613.5
[2025-11-21 11:29:54] 2025-11-21 10:29:19,474 | INFO     | mean y: 2261243.0833333335
[2025-11-21 11:29:54] 2025-11-21 10:29:19,474 | INFO     | intersect: -8330042393.661698
[2025-11-21 11:29:54] 2025-11-21 10:29:19,474 | INFO     | chi2: 0.9540879177368485
[2025-11-21 11:29:54] 2025-11-21 10:29:19,474 | INFO     | current chi2=0.9540879177368485 (change=0.9069954597754325 %)
[2025-11-21 11:29:54] 2025-11-21 10:29:19,474 | INFO     | left removable region: 20
[2025-11-21 11:29:54] 2025-11-21 10:29:19,474 | INFO     | sum of square deviations: 13408995600.0
[2025-11-21 11:29:54] 2025-11-21 10:29:19,476 | INFO     | sum of deviations: 93345902517.0
[2025-11-21 11:29:54] 2025-11-21 10:29:19,476 | INFO     | mean x: 1763709583.0
[2025-11-21 11:29:54] 2025-11-21 10:29:19,476 | INFO     | mean y: 2272429.982905983
[2025-11-21 11:29:54] 2025-11-21 10:29:19,476 | INFO     | intersect: -12275683929.628153
[2025-11-21 11:29:54] 2025-11-21 10:29:19,477 | INFO     | chi2: 0.020262919540441782
[2025-11-21 11:29:54] 2025-11-21 10:29:19,477 | INFO     | current memory leak: 6.96 B/s (using 351 data points, chi2=0.02)
[2025-11-21 11:29:54] 2025-11-21 10:29:19,477 | INFO     | could have reported an average CPU frequency of 5136 MHz (16 samples)
[2025-11-21 11:29:54] 2025-11-21 10:29:19,477 | INFO     | ..............................
[2025-11-21 11:29:54] 2025-11-21 10:29:19,477 | INFO     | . Timing measurements:
[2025-11-21 11:29:54] 2025-11-21 10:29:19,477 | INFO     | . get job = 0 s
[2025-11-21 11:29:54] 2025-11-21 10:29:19,477 | INFO     | . initial setup = 0 s
[2025-11-21 11:29:54] 2025-11-21 10:29:19,477 | INFO     | . payload setup = 2 s
[2025-11-21 11:29:54] 2025-11-21 10:29:19,477 | INFO     | . stage-in = 0 s
[2025-11-21 11:29:54] 2025-11-21 10:29:19,477 | INFO     | . payload execution = 23263 s
[2025-11-21 11:29:54] 2025-11-21 10:29:19,478 | INFO     | . stage-out = 3 s
[2025-11-21 11:29:54] 2025-11-21 10:29:19,478 | INFO     | . log creation = 0 s
[2025-11-21 11:29:54] 2025-11-21 10:29:19,478 | INFO     | ..............................
[2025-11-21 11:29:54] 2025-11-21 10:29:19,524 | INFO     | 
[2025-11-21 11:29:54] 2025-11-21 10:29:19,525 | INFO     | job summary report
[2025-11-21 11:29:54] 2025-11-21 10:29:19,525 | INFO     | --------------------------------------------------
[2025-11-21 11:29:54] 2025-11-21 10:29:19,525 | INFO     | PanDA job id: 6891582193
[2025-11-21 11:29:54] 2025-11-21 10:29:19,525 | INFO     | task id: 47493068
[2025-11-21 11:29:54] 2025-11-21 10:29:19,525 | INFO     | errors: (none)
[2025-11-21 11:29:54] 2025-11-21 10:29:19,525 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 11:29:54] 2025-11-21 10:29:19,525 | INFO     | pilot state: finished 
[2025-11-21 11:29:54] 2025-11-21 10:29:19,525 | INFO     | transexitcode: 0
[2025-11-21 11:29:54] 2025-11-21 10:29:19,525 | INFO     | exeerrorcode: 0
[2025-11-21 11:29:54] 2025-11-21 10:29:19,525 | INFO     | exeerrordiag: 
[2025-11-21 11:29:54] 2025-11-21 10:29:19,525 | INFO     | exitcode: 0
[2025-11-21 11:29:54] 2025-11-21 10:29:19,525 | INFO     | exitmsg: OK
[2025-11-21 11:29:54] 2025-11-21 10:29:19,525 | INFO     | cpuconsumptiontime: 91993 s
[2025-11-21 11:29:54] 2025-11-21 10:29:19,525 | INFO     | nevents: 1000
[2025-11-21 11:29:54] 2025-11-21 10:29:19,525 | INFO     | neventsw: 0
[2025-11-21 11:29:54] 2025-11-21 10:29:19,525 | INFO     | pid: 2891408
[2025-11-21 11:29:54] 2025-11-21 10:29:19,525 | INFO     | pgrp: 2891408
[2025-11-21 11:29:54] 2025-11-21 10:29:19,525 | INFO     | corecount: 4
[2025-11-21 11:29:54] 2025-11-21 10:29:19,525 | INFO     | event service: False
[2025-11-21 11:29:54] 2025-11-21 10:29:19,526 | INFO     | sizes: {0: 2298805, 2: 2299067, 11: 2299095, 23268: 2335217, 23269: 2335216, 23272: 2344286, 23273: 2344470, 23276: 2344716}
[2025-11-21 11:29:54] 2025-11-21 10:29:19,526 | INFO     | --------------------------------------------------
[2025-11-21 11:29:54] 2025-11-21 10:29:19,526 | INFO     | 
[2025-11-21 11:29:54] 2025-11-21 10:29:19,526 | INFO     | executing command: ls -lF /single_8TB/boinc-client/slots/3
[2025-11-21 11:29:54] 2025-11-21 10:29:19,537 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 11:29:54] 2025-11-21 10:29:19,537 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 11:29:54] 2025-11-21 10:29:19,537 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 11:29:54] 2025-11-21 10:29:19,538 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 11:29:54] 2025-11-21 10:29:19,538 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 11:29:54] 2025-11-21 10:29:19,538 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 11:29:54] 2025-11-21 10:29:19,538 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 11:29:54] 2025-11-21 10:29:19,538 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 11:29:54] 2025-11-21 10:29:19,538 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 11:29:54] 2025-11-21 10:29:19,538 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 11:29:54] 2025-11-21 10:29:19,538 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 11:29:54] 2025-11-21 10:29:19,538 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 11:29:54] 2025-11-21 10:29:19,538 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 11:29:54] 2025-11-21 10:29:19,538 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 11:29:54] 2025-11-21 10:29:19,538 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 11:29:54] 2025-11-21 10:29:19,538 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 11:29:54] 2025-11-21 10:29:19,538 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 11:29:54] 2025-11-21 10:29:19,538 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 11:29:54] 2025-11-21 10:29:19,538 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 11:29:54] 2025-11-21 10:29:19,538 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 11:29:54] 2025-11-21 10:29:19,538 | INFO     | job 6891582193 has completed (purged errors)
[2025-11-21 11:29:54] 2025-11-21 10:29:19,539 | INFO     | overall cleanup function is called
[2025-11-21 11:29:54] 2025-11-21 10:29:20,549 | INFO     | --- collectZombieJob: --- 10, [2891408]
[2025-11-21 11:29:54] 2025-11-21 10:29:20,549 | INFO     | zombie collector waiting for pid 2891408
[2025-11-21 11:29:54] 2025-11-21 10:29:20,549 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 11:29:54] 2025-11-21 10:29:20,549 | INFO     | collected zombie processes
[2025-11-21 11:29:54] 2025-11-21 10:29:20,549 | INFO     | will attempt to kill all subprocesses of pid=2891408
[2025-11-21 11:29:54] 2025-11-21 10:29:20,691 | INFO     | process IDs to be killed: [2891408] (in reverse order)
[2025-11-21 11:29:54] 2025-11-21 10:29:20,746 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 11:29:54] 2025-11-21 10:29:20,746 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 11:29:54] 2025-11-21 10:29:20,751 | INFO     | did not find any defunct processes belonging to 2891408
[2025-11-21 11:29:54] 2025-11-21 10:29:20,755 | INFO     | did not find any defunct processes belonging to 2891408
[2025-11-21 11:29:54] 2025-11-21 10:29:20,757 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 11:29:54] 2025-11-21 10:29:20,757 | INFO     | ready for new job
[2025-11-21 11:29:54] 2025-11-21 10:29:20,757 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 11:29:54] 2025-11-21 10:29:20,758 | INFO     | ***************************************
[2025-11-21 11:29:54] 2025-11-21 10:29:20,758 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 11:29:54] 2025-11-21 10:29:20,758 | INFO     | ***************************************
[2025-11-21 11:29:54] 2025-11-21 10:29:20,758 | INFO     | 
[2025-11-21 11:29:54] 2025-11-21 10:29:20,759 | INFO     | architecture information:
[2025-11-21 11:29:54] 2025-11-21 10:29:20,759 | INFO     | executing command: cat /etc/os-release
[2025-11-21 11:29:54] 2025-11-21 10:29:20,768 | INFO     | cat /etc/os-release:
[2025-11-21 11:29:54] NAME="CentOS Linux"
[2025-11-21 11:29:54] VERSION="7 (Core)"
[2025-11-21 11:29:54] ID="centos"
[2025-11-21 11:29:54] ID_LIKE="rhel fedora"
[2025-11-21 11:29:54] VERSION_ID="7"
[2025-11-21 11:29:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 11:29:54] ANSI_COLOR="0;31"
[2025-11-21 11:29:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 11:29:54] HOME_URL="https://www.centos.org/"
[2025-11-21 11:29:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 11:29:54] 
[2025-11-21 11:29:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 11:29:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 11:29:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 11:29:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 11:29:54] 
[2025-11-21 11:29:54] 2025-11-21 10:29:20,769 | INFO     | ***************************************
[2025-11-21 11:29:54] 2025-11-21 10:29:21,271 | INFO     | executing command: df -mP /single_8TB/boinc-client/slots/3
[2025-11-21 11:29:54] 2025-11-21 10:29:21,285 | INFO     | sufficient remaining disk space (950655778816 B)
[2025-11-21 11:29:54] 2025-11-21 10:29:21,285 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 11:29:54] 2025-11-21 10:29:21,285 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 11:29:54] 2025-11-21 10:29:21,285 | INFO     | update_server=False
[2025-11-21 11:29:54] 2025-11-21 10:29:21,285 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 11:29:54] 2025-11-21 10:29:21,286 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 11:29:54] 2025-11-21 10:29:21,286 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 11:29:54] 2025-11-21 10:29:21,357 | INFO     | all data control threads have been joined
[2025-11-21 11:29:54] 2025-11-21 10:29:21,394 | INFO     | all payload control threads have been joined
[2025-11-21 11:29:54] 2025-11-21 10:29:21,517 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 11:29:54] 2025-11-21 10:29:21,517 | INFO     | aborting loop
[2025-11-21 11:29:54] 2025-11-21 10:29:22,290 | INFO     | [job] retrieve thread has finished
[2025-11-21 11:29:54] 2025-11-21 10:29:22,291 | INFO     | [job] queue monitor thread has finished
[2025-11-21 11:29:54] 2025-11-21 10:29:22,330 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 11:29:54] 2025-11-21 10:29:22,362 | INFO     | [data] control thread has finished
[2025-11-21 11:29:54] 2025-11-21 10:29:22,399 | INFO     | [payload] control thread has finished
[2025-11-21 11:29:54] 2025-11-21 10:29:22,413 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 11:29:54] 2025-11-21 10:29:22,466 | INFO     | [payload] validate_post thread has finished
[2025-11-21 11:29:54] 2025-11-21 10:29:22,522 | INFO     | [job] job monitor thread has finished
[2025-11-21 11:29:54] 2025-11-21 10:29:22,684 | INFO     | all job control threads have been joined
[2025-11-21 11:29:54] 2025-11-21 10:29:22,979 | INFO     | [job] validate thread has finished
[2025-11-21 11:29:54] 2025-11-21 10:29:22,989 | INFO     | [payload] failed_post thread has finished
[2025-11-21 11:29:54] 2025-11-21 10:29:23,032 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 11:29:54] 2025-11-21 10:29:23,079 | INFO     | [data] copytool_in thread has finished
[2025-11-21 11:29:54] 2025-11-21 10:29:23,138 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 11:29:54] 2025-11-21 10:29:23,293 | INFO     | [data] copytool_out thread has finished
[2025-11-21 11:29:54] 2025-11-21 10:29:23,321 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 11:29:54] 2025-11-21 10:29:23,690 | INFO     | [job] control thread has finished
[2025-11-21 11:29:54] 2025-11-21 10:29:26,335 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 11:29:54] 2025-11-21 10:29:48,373 | INFO     | [monitor] cgroup control has ended
[2025-11-21 11:29:54] 2025-11-21 10:29:49,299 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 134657313965888)>', '<ExcThread(monitor, started 134655814661888)>']
[2025-11-21 11:29:54] 2025-11-21 10:29:50,778 | INFO     | PID=2872163 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 11:29:54] 2025-11-21 10:29:50,778 | INFO     | .. there are 6 such processes running
[2025-11-21 11:29:54] 2025-11-21 10:29:50,778 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 11:29:54] 2025-11-21 10:29:50,778 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 11:29:54] 2025-11-21 10:29:50,778 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 11:29:54] 2025-11-21 10:29:50,778 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 11:29:54] 2025-11-21 10:29:50,778 | INFO     | [monitor] control thread has ended
[2025-11-21 11:29:54] 2025-11-21 10:29:54,324 | INFO     | all workflow threads have been joined
[2025-11-21 11:29:54] 2025-11-21 10:29:54,324 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 11:29:54] 2025-11-21 10:29:54,324 | INFO     | traces error code: 0
[2025-11-21 11:29:54] 2025-11-21 10:29:54,324 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 11:29:54] 2025-11-21 10:29:54,399 [wrapper] ==== pilot stdout END ====
[2025-11-21 11:29:54] 2025-11-21 10:29:54,401 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 11:29:54] 2025-11-21 10:29:54,403 [wrapper] pilotpid: 2872163
[2025-11-21 11:29:54] 2025-11-21 10:29:54,404 [wrapper] Pilot exit status: 0
[2025-11-21 11:29:54] 2025-11-21 10:29:54,409 [wrapper] pandaids: 6891582193
[2025-11-21 11:29:54] 2025-11-21 10:29:54,442 [wrapper] cleanup supervisor_pilot 3228420 2872164
[2025-11-21 11:29:54] 2025-11-21 10:29:54,444 [wrapper] Test setup, not cleaning
[2025-11-21 11:29:54] 2025-11-21 10:29:54,447 [wrapper] apfmon messages muted
[2025-11-21 11:29:54] 2025-11-21 10:29:54,449 [wrapper] ==== wrapper stdout END ====
[2025-11-21 11:29:54] 2025-11-21 10:29:54,450 [wrapper] ==== wrapper stderr END ====
[2025-11-21 11:29:54]  *** Error codes and diagnostics ***
[2025-11-21 11:29:54]     "exeErrorCode": 0,
[2025-11-21 11:29:54]     "exeErrorDiag": "",
[2025-11-21 11:29:54]     "pilotErrorCode": 0,
[2025-11-21 11:29:54]     "pilotErrorDiag": "",
[2025-11-21 11:29:54]  *** Listing of results directory ***
[2025-11-21 11:29:54] total 1306192
[2025-11-21 11:29:54] -rw-r--r-- 1 boinc boinc    576529 Nov 18 17:45 pilot3.tar.gz
[2025-11-21 11:29:54] -rw-r--r-- 1 boinc boinc      5112 Nov 18 18:02 queuedata.json
[2025-11-21 11:29:54] -rwx------ 1 boinc boinc     36292 Nov 18 18:04 runpilot2-wrapper.sh
[2025-11-21 11:29:54] -rw-r--r-- 1 boinc boinc       100 Nov 21 05:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 11:29:54] -rw-r--r-- 1 boinc boinc       105 Nov 21 05:01 job.xml
[2025-11-21 11:29:54] -rwxr-xr-x 1 boinc boinc      7986 Nov 21 05:01 run_atlas
[2025-11-21 11:29:54] -rw-r--r-- 2 boinc boinc 410106024 Nov 21 05:01 EVNT.47493065._000422.pool.root.1
[2025-11-21 11:29:54] -rw-r--r-- 2 boinc boinc    590102 Nov 21 05:01 input.tar.gz
[2025-11-21 11:29:54] drwxrwx--x 2 boinc boinc         5 Nov 21 05:01 shared
[2025-11-21 11:29:54] -rw-r--r-- 2 boinc boinc     15120 Nov 21 05:01 start_atlas.sh
[2025-11-21 11:29:54] -rw-r--r-- 1 boinc boinc      6806 Nov 21 05:01 init_data.xml
[2025-11-21 11:29:54] -rw-r--r-- 1 boinc boinc         0 Nov 21 05:01 boinc_setup_complete
[2025-11-21 11:29:54] -rw-r--r-- 1 boinc boinc         0 Nov 21 05:01 boinc_lockfile
[2025-11-21 11:29:54] -rw-r--r-- 1 boinc boinc      2772 Nov 21 05:01 pandaJob.out
[2025-11-21 11:29:54] -rw------- 1 boinc boinc    989817 Nov 21 05:01 agis_schedconf.cvmfs.json
[2025-11-21 11:29:54] drwx------ 5 boinc boinc        22 Nov 21 05:01 pilot3
[2025-11-21 11:29:54] -rw-r--r-- 1 boinc boinc       532 Nov 21 11:25 boinc_task_state.xml
[2025-11-21 11:29:54] -rw------- 1 boinc boinc 917783301 Nov 21 11:28 HITS.47493068._004215.pool.root.1
[2025-11-21 11:29:54] -rw------- 1 boinc boinc        95 Nov 21 11:28 pilot_heartbeat.json
[2025-11-21 11:29:54] -rw------- 1 boinc boinc      1059 Nov 21 11:29 memory_monitor_summary.json
[2025-11-21 11:29:54] -rw------- 1 boinc boinc   1526164 Nov 21 11:29 agis_ddmendpoints.agis.ALL.json
[2025-11-21 11:29:54] -rw------- 1 boinc boinc   1232715 Nov 21 11:29 log.47493068._004215.job.log.tgz.1
[2025-11-21 11:29:54] -rw------- 1 boinc boinc      8591 Nov 21 11:29 heartbeat.json
[2025-11-21 11:29:54] -rw-r--r-- 1 boinc boinc      8192 Nov 21 11:29 boinc_mmap_file
[2025-11-21 11:29:54] -rw-r--r-- 1 boinc boinc        28 Nov 21 11:29 wrapper_checkpoint.txt
[2025-11-21 11:29:54] -rw------- 1 boinc boinc      4834 Nov 21 11:29 pilotlog.txt
[2025-11-21 11:29:54] -rw------- 1 boinc boinc   3377802 Nov 21 11:29 log.47493068._004215.job.log.1
[2025-11-21 11:29:54] -rw------- 1 boinc boinc       353 Nov 21 11:29 output.list
[2025-11-21 11:29:54] -rw-r--r-- 1 boinc boinc       620 Nov 21 11:29 runtime_log
[2025-11-21 11:29:54] -rw------- 1 boinc boinc   4628480 Nov 21 11:29 result.tar.gz
[2025-11-21 11:29:54] -rw-r--r-- 1 boinc boinc      8806 Nov 21 11:29 runtime_log.err
[2025-11-21 11:29:54] -rw------- 1 boinc boinc       661 Nov 21 11:29 wAKMDm3Ief8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm4wFKDmFg1DRm.diag
[2025-11-21 11:29:54] -rw-r--r-- 1 boinc boinc     21389 Nov 21 11:29 stderr.txt
[2025-11-21 11:29:54] HITS file was successfully produced:
[2025-11-21 11:29:54] -rw------- 1 boinc boinc 917783301 Nov 21 11:28 shared/HITS.pool.root.1
[2025-11-21 11:29:54]  *** Contents of shared directory: ***
[2025-11-21 11:29:54] total 1298384
[2025-11-21 11:29:54] -rw-r--r-- 2 boinc boinc 410106024 Nov 21 05:01 ATLAS.root_0
[2025-11-21 11:29:54] -rw-r--r-- 2 boinc boinc    590102 Nov 21 05:01 input.tar.gz
[2025-11-21 11:29:54] -rw-r--r-- 2 boinc boinc     15120 Nov 21 05:01 start_atlas.sh
[2025-11-21 11:29:54] -rw------- 1 boinc boinc 917783301 Nov 21 11:28 HITS.pool.root.1
[2025-11-21 11:29:54] -rw------- 1 boinc boinc   4628480 Nov 21 11:29 result.tar.gz
11:29:56 (2866352): run_atlas exited; CPU time 92036.001416
11:29:56 (2866352): called boinc_finish(0)

</stderr_txt>
]]>

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