Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:22:15 (1667705): wrapper (7.7.26015): starting
13:22:15 (1667705): wrapper: running run_atlas (--nthreads 8)
[2025-11-19 13:22:15] Arguments: --nthreads 8
[2025-11-19 13:22:15] Threads: 8
[2025-11-19 13:22:15] Checking for CVMFS
[2025-11-19 13:22:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 13:22:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 13:22:16] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 13:22:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 13:22:16] 2.13.2.0 8544 24652 120576 153053 1 126 36681954 40960000 21971 16776704 0 39664292 99.760 21199366 33681 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-19 13:22:16] CVMFS is ok
[2025-11-19 13:22:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-19 13:22:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-19 13:22:16] Further information can be found at the LHC@home message board.
[2025-11-19 13:22:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 13:22:16] Checking for apptainer binary...
[2025-11-19 13:22:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 13:22:16] Running /usr/bin/apptainer --version
[2025-11-19 13:22:16] apptainer version 1.4.4-1.el9
[2025-11-19 13:22:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 13:22:16] c-212-10.aglt2.org
[2025-11-19 13:22:16] apptainer works
[2025-11-19 13:22:16] Set ATHENA_PROC_NUMBER=8
[2025-11-19 13:22:16] Set ATHENA_CORE_NUMBER=8
[2025-11-19 13:22:16] Starting ATLAS job with PandaID=6891594174
[2025-11-19 13:22:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 05:12:17]  *** The last 200 lines of the pilot log: ***
[2025-11-20 05:12:17] 2025-11-20 10:11:25,668 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 05:12:17] 2025-11-20 10:11:25,955 | INFO     | time since job start (56931s) is within the limit (172800.0s)
[2025-11-20 05:12:17] 2025-11-20 10:11:26,509 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-20 05:12:17] 2025-11-20 10:11:26,516 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3184.284927083332
[2025-11-20 05:12:17] 2025-11-20 10:11:26,531 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6891594174/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 05:12:17] 2025-11-20 10:11:26,532 | INFO     | extracted standard info from prmon json
[2025-11-20 05:12:17] 2025-11-20 10:11:26,532 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 05:12:17] 2025-11-20 10:11:26,532 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 05:12:17] 2025-11-20 10:11:26,546 | INFO     | fitting pss+swap vs Time
[2025-11-20 05:12:17] 2025-11-20 10:11:26,549 | INFO     | sum of square deviations: 251860439134.91974
[2025-11-20 05:12:17] 2025-11-20 10:11:26,568 | INFO     | sum of deviations: 1774492059437.8552
[2025-11-20 05:12:17] 2025-11-20 10:11:26,568 | INFO     | mean x: 1763605021.8006432
[2025-11-20 05:12:17] 2025-11-20 10:11:26,568 | INFO     | mean y: 2851478.907824223
[2025-11-20 05:12:17] 2025-11-20 10:11:26,569 | INFO     | intersect: -12422693072.34866
[2025-11-20 05:12:17] 2025-11-20 10:11:26,570 | INFO     | chi2: 5.934583271367396
[2025-11-20 05:12:17] 2025-11-20 10:11:26,571 | INFO     | sum of square deviations: 247833750428.6208
[2025-11-20 05:12:17] 2025-11-20 10:11:26,586 | INFO     | sum of deviations: 2072491616829.3787
[2025-11-20 05:12:17] 2025-11-20 10:11:26,587 | INFO     | mean x: 1763604869.310345
[2025-11-20 05:12:17] 2025-11-20 10:11:26,587 | INFO     | mean y: 2862758.2521551726
[2025-11-20 05:12:17] 2025-11-20 10:11:26,587 | INFO     | intersect: -14745154009.93965
[2025-11-20 05:12:17] 2025-11-20 10:11:26,588 | INFO     | chi2: 2.8941728413585057
[2025-11-20 05:12:17] 2025-11-20 10:11:26,588 | INFO     | current chi2=2.8941728413585057 (change=51.23207967571992 %)
[2025-11-20 05:12:17] 2025-11-20 10:11:26,589 | INFO     | sum of square deviations: 243850225322.1453
[2025-11-20 05:12:17] 2025-11-20 10:11:26,605 | INFO     | sum of deviations: 2180250873221.68
[2025-11-20 05:12:17] 2025-11-20 10:11:26,605 | INFO     | mean x: 1763604716.8201516
[2025-11-20 05:12:17] 2025-11-20 10:11:26,605 | INFO     | mean y: 2866877.5763813653
[2025-11-20 05:12:17] 2025-11-20 10:11:26,605 | INFO     | intersect: -15765421705.242556
[2025-11-20 05:12:17] 2025-11-20 10:11:26,606 | INFO     | chi2: 2.3095214847997454
[2025-11-20 05:12:17] 2025-11-20 10:11:26,606 | INFO     | current chi2=2.3095214847997454 (change=20.20098275417196 %)
[2025-11-20 05:12:17] 2025-11-20 10:11:26,606 | INFO     | right removable region: 922
[2025-11-20 05:12:17] 2025-11-20 10:11:26,607 | INFO     | sum of square deviations: 247832725628.6207
[2025-11-20 05:12:17] 2025-11-20 10:11:26,623 | INFO     | sum of deviations: 1527543545028.1038
[2025-11-20 05:12:17] 2025-11-20 10:11:26,624 | INFO     | mean x: 1763605174.310345
[2025-11-20 05:12:17] 2025-11-20 10:11:26,624 | INFO     | mean y: 2860815.6767241377
[2025-11-20 05:12:17] 2025-11-20 10:11:26,624 | INFO     | intersect: -10867308542.15412
[2025-11-20 05:12:17] 2025-11-20 10:11:26,625 | INFO     | chi2: 3.734021140206754
[2025-11-20 05:12:17] 2025-11-20 10:11:26,625 | INFO     | current chi2=3.734021140206754 (change=37.08031432935993 %)
[2025-11-20 05:12:17] 2025-11-20 10:11:26,626 | INFO     | sum of square deviations: 243848232576.7845
[2025-11-20 05:12:17] 2025-11-20 10:11:26,641 | INFO     | sum of deviations: 1467171499157.216
[2025-11-20 05:12:17] 2025-11-20 10:11:26,642 | INFO     | mean x: 1763605326.8190682
[2025-11-20 05:12:17] 2025-11-20 10:11:26,642 | INFO     | mean y: 2863126.6240520044
[2025-11-20 05:12:17] 2025-11-20 10:11:26,642 | INFO     | intersect: -10608292197.030025
[2025-11-20 05:12:17] 2025-11-20 10:11:26,643 | INFO     | chi2: 3.6960357763935203
[2025-11-20 05:12:17] 2025-11-20 10:11:26,643 | INFO     | current chi2=3.6960357763935203 (change=1.0172776850194918 %)
[2025-11-20 05:12:17] 2025-11-20 10:11:26,643 | INFO     | left removable region: 20
[2025-11-20 05:12:17] 2025-11-20 10:11:26,643 | INFO     | sum of square deviations: 227581475508.17737
[2025-11-20 05:12:17] 2025-11-20 10:11:26,658 | INFO     | sum of deviations: 1776689436137.3113
[2025-11-20 05:12:17] 2025-11-20 10:11:26,658 | INFO     | mean x: 1763605296.361419
[2025-11-20 05:12:17] 2025-11-20 10:11:26,659 | INFO     | mean y: 2882147.88248337
[2025-11-20 05:12:17] 2025-11-20 10:11:26,659 | INFO     | intersect: -13765281067.354944
[2025-11-20 05:12:17] 2025-11-20 10:11:26,660 | INFO     | chi2: 0.020502427950438468
[2025-11-20 05:12:17] 2025-11-20 10:11:26,660 | INFO     | current memory leak: 7.81 B/s (using 902 data points, chi2=0.02)
[2025-11-20 05:12:17] 2025-11-20 10:11:26,662 | INFO     | could have reported an average CPU frequency of 3122 MHz (35 samples)
[2025-11-20 05:12:17] 2025-11-20 10:11:26,662 | INFO     | ..............................
[2025-11-20 05:12:17] 2025-11-20 10:11:26,662 | INFO     | . Timing measurements:
[2025-11-20 05:12:17] 2025-11-20 10:11:26,662 | INFO     | . get job = 0 s
[2025-11-20 05:12:17] 2025-11-20 10:11:26,662 | INFO     | . initial setup = 3 s
[2025-11-20 05:12:17] 2025-11-20 10:11:26,662 | INFO     | . payload setup = 12 s
[2025-11-20 05:12:17] 2025-11-20 10:11:26,662 | INFO     | . stage-in = 0 s
[2025-11-20 05:12:17] 2025-11-20 10:11:26,662 | INFO     | . payload execution = 56883 s
[2025-11-20 05:12:17] 2025-11-20 10:11:26,662 | INFO     | . stage-out = 3 s
[2025-11-20 05:12:17] 2025-11-20 10:11:26,662 | INFO     | . log creation = 0 s
[2025-11-20 05:12:17] 2025-11-20 10:11:26,662 | INFO     | ..............................
[2025-11-20 05:12:17] 2025-11-20 10:11:26,744 | INFO     | 
[2025-11-20 05:12:17] 2025-11-20 10:11:26,744 | INFO     | job summary report
[2025-11-20 05:12:17] 2025-11-20 10:11:26,744 | INFO     | --------------------------------------------------
[2025-11-20 05:12:17] 2025-11-20 10:11:26,744 | INFO     | PanDA job id: 6891594174
[2025-11-20 05:12:17] 2025-11-20 10:11:26,745 | INFO     | task id: 47493068
[2025-11-20 05:12:17] 2025-11-20 10:11:26,745 | INFO     | errors: (none)
[2025-11-20 05:12:17] 2025-11-20 10:11:26,745 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 05:12:17] 2025-11-20 10:11:26,745 | INFO     | pilot state: finished 
[2025-11-20 05:12:17] 2025-11-20 10:11:26,745 | INFO     | transexitcode: 0
[2025-11-20 05:12:17] 2025-11-20 10:11:26,745 | INFO     | exeerrorcode: 0
[2025-11-20 05:12:17] 2025-11-20 10:11:26,745 | INFO     | exeerrordiag: 
[2025-11-20 05:12:17] 2025-11-20 10:11:26,745 | INFO     | exitcode: 0
[2025-11-20 05:12:17] 2025-11-20 10:11:26,745 | INFO     | exitmsg: OK
[2025-11-20 05:12:17] 2025-11-20 10:11:26,745 | INFO     | cpuconsumptiontime: 198112 s
[2025-11-20 05:12:17] 2025-11-20 10:11:26,745 | INFO     | nevents: 1000
[2025-11-20 05:12:17] 2025-11-20 10:11:26,745 | INFO     | neventsw: 0
[2025-11-20 05:12:17] 2025-11-20 10:11:26,745 | INFO     | pid: 1678088
[2025-11-20 05:12:17] 2025-11-20 10:11:26,746 | INFO     | pgrp: 1678088
[2025-11-20 05:12:17] 2025-11-20 10:11:26,746 | INFO     | corecount: 8
[2025-11-20 05:12:17] 2025-11-20 10:11:26,746 | INFO     | event service: False
[2025-11-20 05:12:17] 2025-11-20 10:11:26,746 | INFO     | sizes: {0: 2297200, 7: 2297462, 11: 2297490, 56900: 2349388, 56901: 2349387, 56904: 2358621, 56915: 2358811}
[2025-11-20 05:12:17] 2025-11-20 10:11:26,746 | INFO     | --------------------------------------------------
[2025-11-20 05:12:17] 2025-11-20 10:11:26,746 | INFO     | 
[2025-11-20 05:12:17] 2025-11-20 10:11:26,746 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-20 05:12:17] 2025-11-20 10:11:26,767 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 05:12:17] 2025-11-20 10:11:26,767 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 05:12:17] 2025-11-20 10:11:26,767 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 05:12:17] 2025-11-20 10:11:26,767 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 05:12:17] 2025-11-20 10:11:26,767 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 05:12:17] 2025-11-20 10:11:26,767 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 05:12:17] 2025-11-20 10:11:26,767 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 05:12:17] 2025-11-20 10:11:26,768 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 05:12:17] 2025-11-20 10:11:26,768 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 05:12:17] 2025-11-20 10:11:26,768 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 05:12:17] 2025-11-20 10:11:26,768 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 05:12:17] 2025-11-20 10:11:26,768 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 05:12:17] 2025-11-20 10:11:26,768 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 05:12:17] 2025-11-20 10:11:26,768 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 05:12:17] 2025-11-20 10:11:26,768 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 05:12:17] 2025-11-20 10:11:26,768 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 05:12:17] 2025-11-20 10:11:26,768 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 05:12:17] 2025-11-20 10:11:26,768 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 05:12:17] 2025-11-20 10:11:26,768 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 05:12:17] 2025-11-20 10:11:26,769 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 05:12:17] 2025-11-20 10:11:26,769 | INFO     | job 6891594174 has completed (purged errors)
[2025-11-20 05:12:17] 2025-11-20 10:11:26,769 | INFO     | overall cleanup function is called
[2025-11-20 05:12:17] 2025-11-20 10:11:27,788 | INFO     | --- collectZombieJob: --- 10, [1678088]
[2025-11-20 05:12:17] 2025-11-20 10:11:27,788 | INFO     | zombie collector waiting for pid 1678088
[2025-11-20 05:12:17] 2025-11-20 10:11:27,788 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 05:12:17] 2025-11-20 10:11:27,788 | INFO     | collected zombie processes
[2025-11-20 05:12:17] 2025-11-20 10:11:27,788 | INFO     | will attempt to kill all subprocesses of pid=1678088
[2025-11-20 05:12:17] 2025-11-20 10:11:28,199 | INFO     | process IDs to be killed: [1678088] (in reverse order)
[2025-11-20 05:12:17] 2025-11-20 10:11:28,323 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 05:12:17] 2025-11-20 10:11:28,323 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 05:12:17] 2025-11-20 10:11:28,341 | INFO     | did not find any defunct processes belonging to 1678088
[2025-11-20 05:12:17] 2025-11-20 10:11:28,355 | INFO     | did not find any defunct processes belonging to 1678088
[2025-11-20 05:12:17] 2025-11-20 10:11:28,356 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 05:12:17] 2025-11-20 10:11:28,356 | INFO     | ready for new job
[2025-11-20 05:12:17] 2025-11-20 10:11:28,356 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 05:12:17] 2025-11-20 10:11:28,361 | INFO     | ***************************************
[2025-11-20 05:12:17] 2025-11-20 10:11:28,361 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 05:12:17] 2025-11-20 10:11:28,361 | INFO     | ***************************************
[2025-11-20 05:12:17] 2025-11-20 10:11:28,361 | INFO     | 
[2025-11-20 05:12:17] 2025-11-20 10:11:28,366 | INFO     | architecture information:
[2025-11-20 05:12:17] 2025-11-20 10:11:28,367 | INFO     | executing command: cat /etc/os-release
[2025-11-20 05:12:17] 2025-11-20 10:11:28,382 | INFO     | cat /etc/os-release:
[2025-11-20 05:12:17] NAME="CentOS Linux"
[2025-11-20 05:12:17] VERSION="7 (Core)"
[2025-11-20 05:12:17] ID="centos"
[2025-11-20 05:12:17] ID_LIKE="rhel fedora"
[2025-11-20 05:12:17] VERSION_ID="7"
[2025-11-20 05:12:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 05:12:17] ANSI_COLOR="0;31"
[2025-11-20 05:12:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 05:12:17] HOME_URL="https://www.centos.org/"
[2025-11-20 05:12:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 05:12:17] 
[2025-11-20 05:12:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 05:12:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 05:12:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 05:12:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 05:12:17] 
[2025-11-20 05:12:17] 2025-11-20 10:11:28,382 | INFO     | ***************************************
[2025-11-20 05:12:17] 2025-11-20 10:11:28,884 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-20 05:12:17] 2025-11-20 10:11:28,908 | INFO     | sufficient remaining disk space (123949023232 B)
[2025-11-20 05:12:17] 2025-11-20 10:11:28,908 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 05:12:17] 2025-11-20 10:11:28,909 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 05:12:17] 2025-11-20 10:11:28,909 | INFO     | update_server=False
[2025-11-20 05:12:17] 2025-11-20 10:11:28,909 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 05:12:17] 2025-11-20 10:11:29,015 | INFO     | all payload control threads have been joined
[2025-11-20 05:12:17] 2025-11-20 10:11:29,030 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 05:12:17] 2025-11-20 10:11:29,040 | INFO     | all job control threads have been joined
[2025-11-20 05:12:17] 2025-11-20 10:11:29,183 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 05:12:17] 2025-11-20 10:11:29,183 | INFO     | aborting loop
[2025-11-20 05:12:17] 2025-11-20 10:11:29,914 | INFO     | [job] retrieve thread has finished
[2025-11-20 05:12:17] 2025-11-20 10:11:29,985 | INFO     | all data control threads have been joined
[2025-11-20 05:12:17] 2025-11-20 10:11:30,020 | INFO     | [payload] control thread has finished
[2025-11-20 05:12:17] 2025-11-20 10:11:30,045 | INFO     | [job] control thread has finished
[2025-11-20 05:12:17] 2025-11-20 10:11:30,188 | INFO     | [job] job monitor thread has finished
[2025-11-20 05:12:17] 2025-11-20 10:11:30,477 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 05:12:17] 2025-11-20 10:11:30,641 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 05:12:17] 2025-11-20 10:11:30,990 | INFO     | [data] control thread has finished
[2025-11-20 05:12:17] 2025-11-20 10:11:31,014 | INFO     | [job] validate thread has finished
[2025-11-20 05:12:17] 2025-11-20 10:11:31,015 | INFO     | [data] copytool_in thread has finished
[2025-11-20 05:12:17] 2025-11-20 10:11:31,036 | INFO     | [data] copytool_out thread has finished
[2025-11-20 05:12:17] 2025-11-20 10:11:31,106 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 05:12:17] 2025-11-20 10:11:31,220 | INFO     | [payload] failed_post thread has finished
[2025-11-20 05:12:17] 2025-11-20 10:11:31,225 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 05:12:17] 2025-11-20 10:11:31,323 | INFO     | [payload] validate_post thread has finished
[2025-11-20 05:12:17] 2025-11-20 10:11:31,759 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 05:12:17] 2025-11-20 10:11:32,765 | INFO     | [job] queue monitor thread has finished
[2025-11-20 05:12:17] 2025-11-20 10:11:35,114 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 05:12:17] 2025-11-20 10:11:39,062 | INFO     | job.realtimelogging is not enabled
[2025-11-20 05:12:17] 2025-11-20 10:11:40,068 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 05:12:17] 2025-11-20 10:11:59,527 | INFO     | PID=1671390 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-20 05:12:17] 2025-11-20 10:11:59,527 | INFO     | .. there are 15 such processes running
[2025-11-20 05:12:17] 2025-11-20 10:11:59,528 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 05:12:17] 2025-11-20 10:11:59,528 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 05:12:17] 2025-11-20 10:11:59,528 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 05:12:17] 2025-11-20 10:12:12,000 | INFO     | [monitor] cgroup control has ended
[2025-11-20 05:12:17] 2025-11-20 10:12:12,046 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139712330716992)>', '<ExcThread(monitor, started 139711846799104)>']
[2025-11-20 05:12:17] 2025-11-20 10:12:12,609 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 05:12:17] 2025-11-20 10:12:12,609 | INFO     | [monitor] control thread has ended
[2025-11-20 05:12:17] 2025-11-20 10:12:17,071 | INFO     | all workflow threads have been joined
[2025-11-20 05:12:17] 2025-11-20 10:12:17,071 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 05:12:17] 2025-11-20 10:12:17,071 | INFO     | traces error code: 0
[2025-11-20 05:12:17] 2025-11-20 10:12:17,072 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 05:12:17] 2025-11-20 10:12:17,296 [wrapper] ==== pilot stdout END ====
[2025-11-20 05:12:17] 2025-11-20 10:12:17,307 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 05:12:17] 2025-11-20 10:12:17,323 [wrapper] pilotpid: 1671390
[2025-11-20 05:12:17] 2025-11-20 10:12:17,333 [wrapper] Pilot exit status: 0
[2025-11-20 05:12:17] 2025-11-20 10:12:17,375 [wrapper] pandaids: 6891594174
[2025-11-20 05:12:17] 2025-11-20 10:12:17,468 [wrapper] cleanup supervisor_pilot 3710784 1671391
[2025-11-20 05:12:17] 2025-11-20 10:12:17,486 [wrapper] Test setup, not cleaning
[2025-11-20 05:12:17] 2025-11-20 10:12:17,521 [wrapper] apfmon messages muted
[2025-11-20 05:12:17] 2025-11-20 10:12:17,524 [wrapper] ==== wrapper stdout END ====
[2025-11-20 05:12:17] 2025-11-20 10:12:17,527 [wrapper] ==== wrapper stderr END ====
[2025-11-20 05:12:17]  *** Error codes and diagnostics ***
[2025-11-20 05:12:17]     "exeErrorCode": 0,
[2025-11-20 05:12:17]     "exeErrorDiag": "",
[2025-11-20 05:12:17]     "pilotErrorCode": 0,
[2025-11-20 05:12:17]     "pilotErrorDiag": "",
[2025-11-20 05:12:17]  *** Listing of results directory ***
[2025-11-20 05:12:17] total 1319128
[2025-11-20 05:12:17] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 13:36 pilot3.tar.gz
[2025-11-20 05:12:17] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 13:40 queuedata.json
[2025-11-20 05:12:17] -rwx------. 1 boincer umatlas     36292 Nov 18 13:40 runpilot2-wrapper.sh
[2025-11-20 05:12:17] -rw-r--r--. 1 boincer umatlas       100 Nov 19 13:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 05:12:17] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 19 13:22 run_atlas
[2025-11-20 05:12:17] -rw-r--r--. 1 boincer umatlas       105 Nov 19 13:22 job.xml
[2025-11-20 05:12:17] -rw-r--r--. 2 boincer umatlas 410092256 Nov 19 13:22 EVNT.47493065._000754.pool.root.1
[2025-11-20 05:12:17] -rw-r--r--. 2 boincer umatlas     15120 Nov 19 13:22 start_atlas.sh
[2025-11-20 05:12:17] drwxrwx--x. 2 boincer umatlas      4096 Nov 19 13:22 shared
[2025-11-20 05:12:17] -rw-r--r--. 2 boincer umatlas    590100 Nov 19 13:22 input.tar.gz
[2025-11-20 05:12:17] -rw-r--r--. 1 boincer umatlas         0 Nov 19 13:22 boinc_lockfile
[2025-11-20 05:12:17] -rw-r--r--. 1 boincer umatlas      2773 Nov 19 13:22 pandaJob.out
[2025-11-20 05:12:17] -rw-------. 1 boincer umatlas    989434 Nov 19 13:22 agis_schedconf.cvmfs.json
[2025-11-20 05:12:17] drwx------. 5 boincer umatlas      4096 Nov 19 13:22 pilot3
[2025-11-20 05:12:17] -rw-r--r--. 1 boincer umatlas       533 Nov 20 05:00 boinc_task_state.xml
[2025-11-20 05:12:17] -rw-r--r--. 1 boincer umatlas      6949 Nov 20 05:09 init_data.xml
[2025-11-20 05:12:17] -rw-------. 1 boincer umatlas 917327083 Nov 20 05:10 HITS.47493068._006186.pool.root.1
[2025-11-20 05:12:17] -rw-------. 1 boincer umatlas      1073 Nov 20 05:11 memory_monitor_summary.json
[2025-11-20 05:12:17] -rw-------. 1 boincer umatlas   1525063 Nov 20 05:11 agis_ddmendpoints.agis.ALL.json
[2025-11-20 05:12:17] -rw-------. 1 boincer umatlas   2114825 Nov 20 05:11 log.47493068._006186.job.log.tgz.1
[2025-11-20 05:12:17] -rw-------. 1 boincer umatlas      8634 Nov 20 05:11 heartbeat.json
[2025-11-20 05:12:17] -rw-------. 1 boincer umatlas        95 Nov 20 05:11 pilot_heartbeat.json
[2025-11-20 05:12:17] -rw-r--r--. 1 boincer umatlas      8192 Nov 20 05:12 boinc_mmap_file
[2025-11-20 05:12:17] -rw-r--r--. 1 boincer umatlas        29 Nov 20 05:12 wrapper_checkpoint.txt
[2025-11-20 05:12:17] -rw-------. 1 boincer umatlas      4897 Nov 20 05:12 pilotlog.txt
[2025-11-20 05:12:17] -rw-------. 1 boincer umatlas   7608531 Nov 20 05:12 log.47493068._006186.job.log.1
[2025-11-20 05:12:17] -rw-------. 1 boincer umatlas       353 Nov 20 05:12 output.list
[2025-11-20 05:12:17] -rw-r--r--. 1 boincer umatlas       620 Nov 20 05:12 runtime_log
[2025-11-20 05:12:17] -rw-------. 1 boincer umatlas   9738240 Nov 20 05:12 result.tar.gz
[2025-11-20 05:12:17] -rw-------. 1 boincer umatlas       665 Nov 20 05:12 vofMDm0nff8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmdhFKDmRapt7n.diag
[2025-11-20 05:12:17] -rw-r--r--. 1 boincer umatlas      8704 Nov 20 05:12 runtime_log.err
[2025-11-20 05:12:17] -rw-r--r--. 1 boincer umatlas     21306 Nov 20 05:12 stderr.txt
[2025-11-20 05:12:17] HITS file was successfully produced:
[2025-11-20 05:12:17] -rw-------. 1 boincer umatlas 917327083 Nov 20 05:10 shared/HITS.pool.root.1
[2025-11-20 05:12:17]  *** Contents of shared directory: ***
[2025-11-20 05:12:17] total 1306428
[2025-11-20 05:12:17] -rw-r--r--. 2 boincer umatlas 410092256 Nov 19 13:22 ATLAS.root_0
[2025-11-20 05:12:17] -rw-r--r--. 2 boincer umatlas     15120 Nov 19 13:22 start_atlas.sh
[2025-11-20 05:12:17] -rw-r--r--. 2 boincer umatlas    590100 Nov 19 13:22 input.tar.gz
[2025-11-20 05:12:17] -rw-------. 1 boincer umatlas 917327083 Nov 20 05:10 HITS.pool.root.1
[2025-11-20 05:12:17] -rw-------. 1 boincer umatlas   9738240 Nov 20 05:12 result.tar.gz
05:12:18 (1667705): run_atlas exited; CPU time 198469.325677
05:12:18 (1667705): called boinc_finish(0)

</stderr_txt>
]]>

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