Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:54:50 (4189065): wrapper (7.7.26015): starting
11:54:50 (4189065): wrapper: running run_atlas (--nthreads 8)
[2025-11-19 11:54:50] Arguments: --nthreads 8
[2025-11-19 11:54:50] Threads: 8
[2025-11-19 11:54:50] Checking for CVMFS
[2025-11-19 11:54:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 11:54:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 11:54:51] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 11:54:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 11:54:52] 2.13.3.0 1933508 17438 210960 153051 3 205 25615685 32503809 35469 16776704 0 75017200 99.417 108778589 40510 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-19 11:54:52] CVMFS is ok
[2025-11-19 11:54:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-19 11:54:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-19 11:54:52] Further information can be found at the LHC@home message board.
[2025-11-19 11:54:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 11:54:52] Checking for apptainer binary...
[2025-11-19 11:54:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 11:54:52] Running /usr/bin/apptainer --version
[2025-11-19 11:54:52] apptainer version 1.4.4-1.el9
[2025-11-19 11:54:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 11:54:53] c7-3-16.aglt2.org
[2025-11-19 11:54:53] apptainer works
[2025-11-19 11:54:53] Set ATHENA_PROC_NUMBER=8
[2025-11-19 11:54:53] Set ATHENA_CORE_NUMBER=8
[2025-11-19 11:54:53] Starting ATLAS job with PandaID=6892522075
[2025-11-19 11:54:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
21:40:06 (4189065): BOINC client no longer exists - exiting
21:40:06 (4189065): timer handler: client dead, exiting
21:49:36 (2909127): wrapper (7.7.26015): starting
21:49:36 (2909127): wrapper: running run_atlas (--nthreads 11)
[2025-11-19 21:49:36] Arguments: --nthreads 11
[2025-11-19 21:49:36] Threads: 11
[2025-11-19 21:49:36] This job has been restarted, cleaning up previous attempt
[2025-11-19 21:49:36] Checking for CVMFS
[2025-11-19 21:49:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 21:49:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 21:49:36] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 21:49:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 21:49:37] 2.13.3.0 1933508 18033 213780 153065 1 200 21791992 32503808 24585 16776704 0 79372452 99.427 111902878 40183 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-19 21:49:37] CVMFS is ok
[2025-11-19 21:49:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-19 21:49:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-19 21:49:37] Further information can be found at the LHC@home message board.
[2025-11-19 21:49:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 21:49:37] Checking for apptainer binary...
[2025-11-19 21:49:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 21:49:37] Running /usr/bin/apptainer --version
[2025-11-19 21:49:37] apptainer version 1.4.4-1.el9
[2025-11-19 21:49:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 21:49:37] c7-3-16.aglt2.org
[2025-11-19 21:49:37] apptainer works
[2025-11-19 21:49:37] Set ATHENA_PROC_NUMBER=11
[2025-11-19 21:49:37] Set ATHENA_CORE_NUMBER=11
[2025-11-19 21:49:37] Starting ATLAS job with PandaID=6892522075
[2025-11-19 21:49:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 01:27:07]  *** The last 200 lines of the pilot log: ***
[2025-11-21 01:27:07] 2025-11-21 06:26:18,946 | INFO     | time since job start (99388s) is within the limit (172800.0s)
[2025-11-21 01:27:07] 2025-11-21 06:26:20,956 | INFO     | time since job start (99390s) is within the limit (172800.0s)
[2025-11-21 01:27:07] 2025-11-21 06:26:20,958 | INFO     | monitor loop #5435: job 0:6892522075 is in state 'finished'
[2025-11-21 01:27:07] 2025-11-21 06:26:20,958 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 01:27:07] 2025-11-21 06:26:23,479 | INFO     | monitor loop #5436: job 0:6892522075 is in state 'finished'
[2025-11-21 01:27:07] 2025-11-21 06:26:23,479 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 01:27:07] 2025-11-21 06:26:24,300 | INFO     | PID=2932470 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 01:27:07] 2025-11-21 06:26:24,301 | INFO     | .. there are 47 such processes running
[2025-11-21 01:27:07] 2025-11-21 06:26:25,301 | INFO     | time since job start (99395s) is within the limit (172800.0s)
[2025-11-21 01:27:07] 2025-11-21 06:26:25,987 | INFO     | monitor loop #5437: job 0:6892522075 is in state 'finished'
[2025-11-21 01:27:07] 2025-11-21 06:26:25,987 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 01:27:07] 2025-11-21 06:26:27,308 | INFO     | time since job start (99397s) is within the limit (172800.0s)
[2025-11-21 01:27:07] 2025-11-21 06:26:28,490 | INFO     | monitor loop #5438: job 0:6892522075 is in state 'finished'
[2025-11-21 01:27:07] 2025-11-21 06:26:28,490 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 01:27:07] 2025-11-21 06:26:29,039 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 01:27:07] 2025-11-21 06:26:29,062 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2936.4058125000006
[2025-11-21 01:27:07] 2025-11-21 06:26:29,104 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6892522075/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 01:27:07] 2025-11-21 06:26:29,105 | INFO     | extracted standard info from prmon json
[2025-11-21 01:27:07] 2025-11-21 06:26:29,105 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 01:27:07] 2025-11-21 06:26:29,105 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 01:27:07] 2025-11-21 06:26:29,172 | INFO     | fitting pss+swap vs Time
[2025-11-21 01:27:07] 2025-11-21 06:26:29,184 | INFO     | sum of square deviations: 1340443082584.9941
[2025-11-21 01:27:07] 2025-11-21 06:26:29,321 | INFO     | sum of deviations: 1927838678425.439
[2025-11-21 01:27:07] 2025-11-21 06:26:29,321 | INFO     | mean x: 1763656675.335175
[2025-11-21 01:27:07] 2025-11-21 06:26:29,321 | INFO     | mean y: 3315872.7446286064
[2025-11-21 01:27:07] 2025-11-21 06:26:29,321 | INFO     | intersect: -2533192837.209327
[2025-11-21 01:27:07] 2025-11-21 06:26:29,327 | INFO     | time since job start (99399s) is within the limit (172800.0s)
[2025-11-21 01:27:07] 2025-11-21 06:26:29,333 | INFO     | chi2: 33.19949627614222
[2025-11-21 01:27:07] 2025-11-21 06:26:29,334 | INFO     | sum of square deviations: 1328138845471.0537
[2025-11-21 01:27:07] 2025-11-21 06:26:29,496 | INFO     | sum of deviations: 2651146404617.299
[2025-11-21 01:27:07] 2025-11-21 06:26:29,496 | INFO     | mean x: 1763656522.8392856
[2025-11-21 01:27:07] 2025-11-21 06:26:29,496 | INFO     | mean y: 3324836.0548029556
[2025-11-21 01:27:07] 2025-11-21 06:26:29,496 | INFO     | intersect: -3517174293.5726233
[2025-11-21 01:27:07] 2025-11-21 06:26:29,498 | INFO     | chi2: 28.72570344924538
[2025-11-21 01:27:07] 2025-11-21 06:26:29,498 | INFO     | current chi2=28.72570344924538 (change=13.475484054593299 %)
[2025-11-21 01:27:07] 2025-11-21 06:26:29,498 | INFO     | right removable region: 1623
[2025-11-21 01:27:07] 2025-11-21 06:26:29,503 | INFO     | sum of square deviations: 1328137816221.0815
[2025-11-21 01:27:07] 2025-11-21 06:26:29,664 | INFO     | sum of deviations: 1429239737950.5137
[2025-11-21 01:27:07] 2025-11-21 06:26:29,664 | INFO     | mean x: 1763656827.8374383
[2025-11-21 01:27:07] 2025-11-21 06:26:29,664 | INFO     | mean y: 3322046.6988916257
[2025-11-21 01:27:07] 2025-11-21 06:26:29,664 | INFO     | intersect: -1894589745.0344908
[2025-11-21 01:27:07] 2025-11-21 06:26:29,666 | INFO     | chi2: 31.093853759588498
[2025-11-21 01:27:07] 2025-11-21 06:26:29,666 | INFO     | current chi2=31.093853759588498 (change=6.342392965964596 %)
[2025-11-21 01:27:07] 2025-11-21 06:26:29,666 | INFO     | left removable region: 10
[2025-11-21 01:27:07] 2025-11-21 06:26:29,673 | INFO     | sum of square deviations: 1301333319917.4026
[2025-11-21 01:27:07] 2025-11-21 06:26:29,785 | INFO     | sum of deviations: 2085848510181.4473
[2025-11-21 01:27:07] 2025-11-21 06:26:29,785 | INFO     | mean x: 1763656797.3428395
[2025-11-21 01:27:07] 2025-11-21 06:26:29,785 | INFO     | mean y: 3335113.514569126
[2025-11-21 01:27:07] 2025-11-21 06:26:29,785 | INFO     | intersect: -2823550855.5947423
[2025-11-21 01:27:07] 2025-11-21 06:26:29,787 | INFO     | chi2: 25.70780912576703
[2025-11-21 01:27:07] 2025-11-21 06:26:29,787 | INFO     | current memory leak: 1.60 B/s (using 1613 data points, chi2=25.71)
[2025-11-21 01:27:07] 2025-11-21 06:26:29,788 | INFO     | could have reported an average CPU frequency of 3114 MHz (58 samples)
[2025-11-21 01:27:07] 2025-11-21 06:26:29,788 | INFO     | ..............................
[2025-11-21 01:27:07] 2025-11-21 06:26:29,788 | INFO     | . Timing measurements:
[2025-11-21 01:27:07] 2025-11-21 06:26:29,788 | INFO     | . get job = 0 s
[2025-11-21 01:27:07] 2025-11-21 06:26:29,788 | INFO     | . initial setup = 2 s
[2025-11-21 01:27:07] 2025-11-21 06:26:29,789 | INFO     | . payload setup = 7 s
[2025-11-21 01:27:07] 2025-11-21 06:26:29,789 | INFO     | . stage-in = 0 s
[2025-11-21 01:27:07] 2025-11-21 06:26:29,789 | INFO     | . payload execution = 99325 s
[2025-11-21 01:27:07] 2025-11-21 06:26:29,789 | INFO     | . stage-out = 8 s
[2025-11-21 01:27:07] 2025-11-21 06:26:29,789 | INFO     | . log creation = 3 s
[2025-11-21 01:27:07] 2025-11-21 06:26:29,789 | INFO     | ..............................
[2025-11-21 01:27:07] 2025-11-21 06:26:29,891 | INFO     | 
[2025-11-21 01:27:07] 2025-11-21 06:26:29,891 | INFO     | job summary report
[2025-11-21 01:27:07] 2025-11-21 06:26:29,891 | INFO     | --------------------------------------------------
[2025-11-21 01:27:07] 2025-11-21 06:26:29,891 | INFO     | PanDA job id: 6892522075
[2025-11-21 01:27:07] 2025-11-21 06:26:29,891 | INFO     | task id: 47493029
[2025-11-21 01:27:07] 2025-11-21 06:26:29,891 | INFO     | errors: (none)
[2025-11-21 01:27:07] 2025-11-21 06:26:29,891 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 01:27:07] 2025-11-21 06:26:29,891 | INFO     | pilot state: finished 
[2025-11-21 01:27:07] 2025-11-21 06:26:29,891 | INFO     | transexitcode: 0
[2025-11-21 01:27:07] 2025-11-21 06:26:29,891 | INFO     | exeerrorcode: 0
[2025-11-21 01:27:07] 2025-11-21 06:26:29,891 | INFO     | exeerrordiag: 
[2025-11-21 01:27:07] 2025-11-21 06:26:29,891 | INFO     | exitcode: 0
[2025-11-21 01:27:07] 2025-11-21 06:26:29,891 | INFO     | exitmsg: OK
[2025-11-21 01:27:07] 2025-11-21 06:26:29,892 | INFO     | cpuconsumptiontime: 208815 s
[2025-11-21 01:27:07] 2025-11-21 06:26:29,892 | INFO     | nevents: 1000
[2025-11-21 01:27:07] 2025-11-21 06:26:29,892 | INFO     | neventsw: 0
[2025-11-21 01:27:07] 2025-11-21 06:26:29,892 | INFO     | pid: 2980324
[2025-11-21 01:27:07] 2025-11-21 06:26:29,892 | INFO     | pgrp: 2980324
[2025-11-21 01:27:07] 2025-11-21 06:26:29,892 | INFO     | corecount: 11
[2025-11-21 01:27:07] 2025-11-21 06:26:29,892 | INFO     | event service: False
[2025-11-21 01:27:07] 2025-11-21 06:26:29,892 | INFO     | sizes: {0: 2297025, 1: 2297224, 6: 2297486, 11: 2297514, 99337: 2367831, 99338: 2367830, 99349: 2378604, 99350: 2378660, 99384: 2378906}
[2025-11-21 01:27:07] 2025-11-21 06:26:29,892 | INFO     | --------------------------------------------------
[2025-11-21 01:27:07] 2025-11-21 06:26:29,892 | INFO     | 
[2025-11-21 01:27:07] 2025-11-21 06:26:29,892 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-21 01:27:07] 2025-11-21 06:26:30,002 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 01:27:07] 2025-11-21 06:26:30,003 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 01:27:07] 2025-11-21 06:26:30,003 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 01:27:07] 2025-11-21 06:26:30,003 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 01:27:07] 2025-11-21 06:26:30,003 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 01:27:07] 2025-11-21 06:26:30,003 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 01:27:07] 2025-11-21 06:26:30,003 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 01:27:07] 2025-11-21 06:26:30,003 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 01:27:07] 2025-11-21 06:26:30,007 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 01:27:07] 2025-11-21 06:26:30,007 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 01:27:07] 2025-11-21 06:26:30,007 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 01:27:07] 2025-11-21 06:26:30,007 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 01:27:07] 2025-11-21 06:26:30,007 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 01:27:07] 2025-11-21 06:26:30,008 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 01:27:07] 2025-11-21 06:26:30,008 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 01:27:07] 2025-11-21 06:26:30,008 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 01:27:07] 2025-11-21 06:26:30,008 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 01:27:07] 2025-11-21 06:26:30,008 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 01:27:07] 2025-11-21 06:26:30,008 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 01:27:07] 2025-11-21 06:26:30,008 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 01:27:07] 2025-11-21 06:26:30,008 | INFO     | job 6892522075 has completed (purged errors)
[2025-11-21 01:27:07] 2025-11-21 06:26:30,008 | INFO     | overall cleanup function is called
[2025-11-21 01:27:07] 2025-11-21 06:26:31,042 | INFO     | --- collectZombieJob: --- 10, [2980324]
[2025-11-21 01:27:07] 2025-11-21 06:26:31,042 | INFO     | zombie collector waiting for pid 2980324
[2025-11-21 01:27:07] 2025-11-21 06:26:31,042 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 01:27:07] 2025-11-21 06:26:31,043 | INFO     | collected zombie processes
[2025-11-21 01:27:07] 2025-11-21 06:26:31,043 | INFO     | will attempt to kill all subprocesses of pid=2980324
[2025-11-21 01:27:07] 2025-11-21 06:26:33,221 | INFO     | process IDs to be killed: [2980324] (in reverse order)
[2025-11-21 01:27:07] 2025-11-21 06:26:34,638 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 01:27:07] 2025-11-21 06:26:34,638 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 01:27:07] 2025-11-21 06:26:34,799 | INFO     | did not find any defunct processes belonging to 2980324
[2025-11-21 01:27:07] 2025-11-21 06:26:34,921 | INFO     | did not find any defunct processes belonging to 2980324
[2025-11-21 01:27:07] 2025-11-21 06:26:34,924 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 01:27:07] 2025-11-21 06:26:34,924 | INFO     | ready for new job
[2025-11-21 01:27:07] 2025-11-21 06:26:34,924 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 01:27:07] 2025-11-21 06:26:34,946 | INFO     | ***************************************
[2025-11-21 01:27:07] 2025-11-21 06:26:34,946 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 01:27:07] 2025-11-21 06:26:34,946 | INFO     | ***************************************
[2025-11-21 01:27:07] 2025-11-21 06:26:34,946 | INFO     | 
[2025-11-21 01:27:07] 2025-11-21 06:26:34,964 | INFO     | architecture information:
[2025-11-21 01:27:07] 2025-11-21 06:26:34,981 | INFO     | executing command: cat /etc/os-release
[2025-11-21 01:27:07] 2025-11-21 06:26:35,060 | INFO     | cat /etc/os-release:
[2025-11-21 01:27:07] NAME="CentOS Linux"
[2025-11-21 01:27:07] VERSION="7 (Core)"
[2025-11-21 01:27:07] ID="centos"
[2025-11-21 01:27:07] ID_LIKE="rhel fedora"
[2025-11-21 01:27:07] VERSION_ID="7"
[2025-11-21 01:27:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 01:27:07] ANSI_COLOR="0;31"
[2025-11-21 01:27:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 01:27:07] HOME_URL="https://www.centos.org/"
[2025-11-21 01:27:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 01:27:07] 
[2025-11-21 01:27:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 01:27:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 01:27:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 01:27:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 01:27:07] 
[2025-11-21 01:27:07] 2025-11-21 06:26:35,060 | INFO     | ***************************************
[2025-11-21 01:27:07] 2025-11-21 06:26:35,562 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-21 01:27:07] 2025-11-21 06:26:35,623 | INFO     | sufficient remaining disk space (84094746624 B)
[2025-11-21 01:27:07] 2025-11-21 06:26:35,623 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 01:27:07] 2025-11-21 06:26:35,623 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 01:27:07] 2025-11-21 06:26:35,623 | INFO     | update_server=False
[2025-11-21 01:27:07] 2025-11-21 06:26:35,623 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 01:27:07] 2025-11-21 06:26:35,624 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 01:27:07] 2025-11-21 06:26:35,624 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 01:27:07] 2025-11-21 06:26:35,990 | INFO     | all job control threads have been joined
[2025-11-21 01:27:07] 2025-11-21 06:26:36,046 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-21 01:27:07] 2025-11-21 06:26:36,046 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-21 01:27:07] 2025-11-21 06:26:36,047 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 01:27:07] 2025-11-21 06:26:36,047 | INFO     | will abort loop
[2025-11-21 01:27:07] 2025-11-21 06:26:36,161 | INFO     | all data control threads have been joined
[2025-11-21 01:27:07] 2025-11-21 06:26:36,629 | INFO     | [job] retrieve thread has finished
[2025-11-21 01:27:07] 2025-11-21 06:26:36,630 | INFO     | [job] queue monitor thread has finished
[2025-11-21 01:27:07] 2025-11-21 06:26:36,657 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 01:27:07] 2025-11-21 06:26:36,696 | INFO     | [payload] failed_post thread has finished
[2025-11-21 01:27:07] 2025-11-21 06:26:36,697 | INFO     | [payload] validate_post thread has finished
[2025-11-21 01:27:07] 2025-11-21 06:26:36,727 | INFO     | [data] copytool_in thread has finished
[2025-11-21 01:27:07] 2025-11-21 06:26:36,913 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 01:27:07] 2025-11-21 06:26:36,999 | INFO     | [job] control thread has finished
[2025-11-21 01:27:07] 2025-11-21 06:26:37,016 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 01:27:07] 2025-11-21 06:26:37,053 | INFO     | [job] job monitor thread has finished
[2025-11-21 01:27:07] 2025-11-21 06:26:37,088 | INFO     | all payload control threads have been joined
[2025-11-21 01:27:07] 2025-11-21 06:26:37,131 | INFO     | [job] validate thread has finished
[2025-11-21 01:27:07] 2025-11-21 06:26:37,167 | INFO     | [data] control thread has finished
[2025-11-21 01:27:07] 2025-11-21 06:26:37,631 | INFO     | [data] copytool_out thread has finished
[2025-11-21 01:27:07] 2025-11-21 06:26:37,808 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 01:27:07] 2025-11-21 06:26:38,043 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 01:27:07] 2025-11-21 06:26:38,094 | INFO     | [payload] control thread has finished
[2025-11-21 01:27:07] 2025-11-21 06:26:42,051 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 01:27:07] 2025-11-21 06:26:48,475 | INFO     | [monitor] cgroup control has ended
[2025-11-21 01:27:07] 2025-11-21 06:26:48,644 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140706457786176)>', '<ExcThread(monitor, started 140706106550016)>']
[2025-11-21 01:27:07] 2025-11-21 06:26:53,670 | INFO     | all workflow threads have been joined
[2025-11-21 01:27:07] 2025-11-21 06:26:53,670 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 01:27:07] 2025-11-21 06:26:53,671 | INFO     | traces error code: 0
[2025-11-21 01:27:07] 2025-11-21 06:26:53,672 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 01:27:07] 2025-11-21 06:27:03,875 | INFO     | PID=2932470 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 01:27:07] 2025-11-21 06:27:03,876 | INFO     | .. there are 47 such processes running
[2025-11-21 01:27:07] 2025-11-21 06:27:03,876 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 01:27:07] 2025-11-21 06:27:03,877 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 01:27:07] 2025-11-21 06:27:03,877 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 01:27:07] 2025-11-21 06:27:03,877 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 01:27:07] 2025-11-21 06:27:03,877 | INFO     | [monitor] control thread has ended
[2025-11-21 01:27:07] 2025-11-21 06:27:04,018 [wrapper] ==== pilot stdout END ====
[2025-11-21 01:27:07] 2025-11-21 06:27:04,052 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 01:27:07] 2025-11-21 06:27:04,115 [wrapper] pilotpid: 2932470
[2025-11-21 01:27:07] 2025-11-21 06:27:04,155 [wrapper] Pilot exit status: 0
[2025-11-21 01:27:07] 2025-11-21 06:27:04,365 [wrapper] pandaids: 6892522075 6892522075
[2025-11-21 01:27:07] 2025-11-21 06:27:06,187 [wrapper] cleanup supervisor_pilot 2488822 2932472
[2025-11-21 01:27:07] 2025-11-21 06:27:06,223 [wrapper] Test setup, not cleaning
[2025-11-21 01:27:07] 2025-11-21 06:27:06,229 [wrapper] apfmon messages muted
[2025-11-21 01:27:07] 2025-11-21 06:27:06,239 [wrapper] ==== wrapper stdout END ====
[2025-11-21 01:27:07] 2025-11-21 06:27:06,256 [wrapper] ==== wrapper stderr END ====
[2025-11-21 01:27:07]  *** Error codes and diagnostics ***
[2025-11-21 01:27:07]     "exeErrorCode": 0,
[2025-11-21 01:27:07]     "exeErrorDiag": "",
[2025-11-21 01:27:07]     "pilotErrorCode": 0,
[2025-11-21 01:27:07]     "pilotErrorDiag": "",
[2025-11-21 01:27:07]  *** Listing of results directory ***
[2025-11-21 01:27:07] total 1723112
[2025-11-21 01:27:07] drwx------. 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-21 01:27:07] -rw-r--r--. 1 boincer umatlas    576529 Nov 19 02:00 pilot3.tar.gz
[2025-11-21 01:27:07] -rw-r--r--. 1 boincer umatlas      5112 Nov 19 02:03 queuedata.json
[2025-11-21 01:27:07] -rwx------. 1 boincer umatlas     36292 Nov 19 02:03 runpilot2-wrapper.sh
[2025-11-21 01:27:07] -rw-r--r--. 1 boincer umatlas       100 Nov 19 11:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 01:27:07] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 19 11:54 run_atlas
[2025-11-21 01:27:07] -rw-r--r--. 1 boincer umatlas       105 Nov 19 11:54 job.xml
[2025-11-21 01:27:07] -rw-r--r--. 3 boincer umatlas 407745335 Nov 19 11:54 EVNT.47493027._000018.pool.root.1
[2025-11-21 01:27:07] -rw-r--r--. 3 boincer umatlas 407745335 Nov 19 11:54 ATLAS.root_0
[2025-11-21 01:27:07] -rw-r--r--. 2 boincer umatlas     15120 Nov 19 11:54 start_atlas.sh
[2025-11-21 01:27:07] drwxrwx--x. 2 boincer umatlas      4096 Nov 19 11:54 shared
[2025-11-21 01:27:07] -rw-r--r--. 2 boincer umatlas    590094 Nov 19 11:54 input.tar.gz
[2025-11-21 01:27:07] -rw-r--r--. 1 boincer umatlas         0 Nov 19 11:54 boinc_lockfile
[2025-11-21 01:27:07] -rw-r--r--. 1 boincer umatlas      2771 Nov 19 21:49 pandaJob.out
[2025-11-21 01:27:07] -rw-------. 1 boincer umatlas    989435 Nov 19 21:49 agis_schedconf.cvmfs.json
[2025-11-21 01:27:07] -rw-r--r--. 1 boincer umatlas       533 Nov 21 00:29 boinc_task_state.xml
[2025-11-21 01:27:07] -rw-r--r--. 1 boincer umatlas      6949 Nov 21 01:19 init_data.xml
[2025-11-21 01:27:07] -rw-------. 1 boincer umatlas 915530438 Nov 21 01:22 HITS.47493029._000137.pool.root.1
[2025-11-21 01:27:07] -rw-------. 1 boincer umatlas      1068 Nov 21 01:25 memory_monitor_summary.json
[2025-11-21 01:27:07] -rw-------. 1 boincer umatlas   1526164 Nov 21 01:25 agis_ddmendpoints.agis.ALL.json
[2025-11-21 01:27:07] -rw-------. 1 boincer umatlas   2895166 Nov 21 01:25 log.47493029._000137.job.log.tgz.1
[2025-11-21 01:27:07] -rw-------. 1 boincer umatlas      8634 Nov 21 01:26 heartbeat.json
[2025-11-21 01:27:07] -rw-------. 1 boincer umatlas       823 Nov 21 01:27 pilotlog.txt
[2025-11-21 01:27:07] -rw-------. 1 boincer umatlas        96 Nov 21 01:27 pilot_heartbeat.json
[2025-11-21 01:27:07] -rw-------. 1 boincer umatlas  11864008 Nov 21 01:27 log.47493029._000137.job.log.1
[2025-11-21 01:27:07] -rw-------. 1 boincer umatlas       353 Nov 21 01:27 output.list
[2025-11-21 01:27:07] -rw-r--r--. 1 boincer umatlas       620 Nov 21 01:27 runtime_log
[2025-11-21 01:27:07] -rw-------. 1 boincer umatlas  14776320 Nov 21 01:27 result.tar.gz
[2025-11-21 01:27:07] -rw-r--r--. 1 boincer umatlas      8786 Nov 21 01:27 runtime_log.err
[2025-11-21 01:27:07] -rw-------. 1 boincer umatlas       790 Nov 21 01:27 mXVNDmMPrf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmKaGKDm23dgWn.diag
[2025-11-21 01:27:07] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 01:27 boinc_mmap_file
[2025-11-21 01:27:07] -rw-r--r--. 1 boincer umatlas        30 Nov 21 01:27 wrapper_checkpoint.txt
[2025-11-21 01:27:07] -rw-r--r--. 1 boincer umatlas     24136 Nov 21 01:27 stderr.txt
[2025-11-21 01:27:07] HITS file was successfully produced:
[2025-11-21 01:27:07] -rw-------. 1 boincer umatlas 915530438 Nov 21 01:22 shared/HITS.pool.root.1
[2025-11-21 01:27:07]  *** Contents of shared directory: ***
[2025-11-21 01:27:07] total 1307304
[2025-11-21 01:27:07] -rw-r--r--. 3 boincer umatlas 407745335 Nov 19 11:54 ATLAS.root_0
[2025-11-21 01:27:07] -rw-r--r--. 2 boincer umatlas     15120 Nov 19 11:54 start_atlas.sh
[2025-11-21 01:27:07] -rw-r--r--. 2 boincer umatlas    590094 Nov 19 11:54 input.tar.gz
[2025-11-21 01:27:07] -rw-------. 1 boincer umatlas 915530438 Nov 21 01:22 HITS.pool.root.1
[2025-11-21 01:27:07] -rw-------. 1 boincer umatlas  14776320 Nov 21 01:27 result.tar.gz
01:27:09 (2909127): run_atlas exited; CPU time 210916.849886
01:27:09 (2909127): called boinc_finish(0)

</stderr_txt>
]]>

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