Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:40:12 (1713924): wrapper (7.7.26015): starting
13:40:12 (1713924): wrapper: running run_atlas (--nthreads 8)
[2025-11-19 13:40:13] Arguments: --nthreads 8
[2025-11-19 13:40:13] Threads: 8
[2025-11-19 13:40:13] Checking for CVMFS
[2025-11-19 13:40:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 13:40:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 13:40:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 13:40:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 13:40:14] 2.13.3.0 7385 20278 195728 153053 3 733 28502157 32503809 46899 16776704 0 288107312 99.667 243897719 50829 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-19 13:40:14] CVMFS is ok
[2025-11-19 13:40:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-19 13:40:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-19 13:40:14] Further information can be found at the LHC@home message board.
[2025-11-19 13:40:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 13:40:14] Checking for apptainer binary...
[2025-11-19 13:40:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 13:40:14] Running /usr/bin/apptainer --version
[2025-11-19 13:40:14] apptainer version 1.4.4-1.el9
[2025-11-19 13:40:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 13:40:15] c8-7-1.aglt2.org
[2025-11-19 13:40:15] apptainer works
[2025-11-19 13:40:15] Set ATHENA_PROC_NUMBER=8
[2025-11-19 13:40:15] Set ATHENA_CORE_NUMBER=8
[2025-11-19 13:40:15] Starting ATLAS job with PandaID=6892526641
[2025-11-19 13:40:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 00:38:31]  *** The last 200 lines of the pilot log: ***
[2025-11-20 00:38:31] 2025-11-20 05:37:36,473 | INFO     | sum of deviations: 579653933119.2064
[2025-11-20 00:38:31] 2025-11-20 05:37:36,473 | INFO     | mean x: 1763597410.097826
[2025-11-20 00:38:31] 2025-11-20 05:37:36,473 | INFO     | mean y: 2829851.933229814
[2025-11-20 00:38:31] 2025-11-20 05:37:36,473 | INFO     | intersect: -12340365473.366735
[2025-11-20 00:38:31] 2025-11-20 05:37:36,474 | INFO     | chi2: 9.133677881930291
[2025-11-20 00:38:31] 2025-11-20 05:37:36,474 | INFO     | sum of square deviations: 80907244841.97014
[2025-11-20 00:38:31] 2025-11-20 05:37:36,479 | INFO     | sum of deviations: 805778145889.4131
[2025-11-20 00:38:31] 2025-11-20 05:37:36,479 | INFO     | mean x: 1763597257.6103287
[2025-11-20 00:38:31] 2025-11-20 05:37:36,479 | INFO     | mean y: 2847871.937402191
[2025-11-20 00:38:31] 2025-11-20 05:37:36,479 | INFO     | intersect: -17561316265.755913
[2025-11-20 00:38:31] 2025-11-20 05:37:36,480 | INFO     | chi2: 5.503478902144407
[2025-11-20 00:38:31] 2025-11-20 05:37:36,480 | INFO     | current chi2=5.503478902144407 (change=39.745204798252495 %)
[2025-11-20 00:38:31] 2025-11-20 05:37:36,480 | INFO     | sum of square deviations: 79023140423.64828
[2025-11-20 00:38:31] 2025-11-20 05:37:36,485 | INFO     | sum of deviations: 968555464384.8939
[2025-11-20 00:38:31] 2025-11-20 05:37:36,485 | INFO     | mean x: 1763597105.1214511
[2025-11-20 00:38:31] 2025-11-20 05:37:36,485 | INFO     | mean y: 2861014.5078864354
[2025-11-20 00:38:31] 2025-11-20 05:37:36,485 | INFO     | intersect: -21612853116.58462
[2025-11-20 00:38:31] 2025-11-20 05:37:36,486 | INFO     | chi2: 2.9910460464570856
[2025-11-20 00:38:31] 2025-11-20 05:37:36,486 | INFO     | current chi2=2.9910460464570856 (change=45.65172139950173 %)
[2025-11-20 00:38:31] 2025-11-20 05:37:36,486 | INFO     | sum of square deviations: 77168447098.68999
[2025-11-20 00:38:31] 2025-11-20 05:37:36,491 | INFO     | sum of deviations: 956437610720.8663
[2025-11-20 00:38:31] 2025-11-20 05:37:36,491 | INFO     | mean x: 1763596952.6295707
[2025-11-20 00:38:31] 2025-11-20 05:37:36,491 | INFO     | mean y: 2860016.3942766297
[2025-11-20 00:38:31] 2025-11-20 05:37:36,491 | INFO     | intersect: -21855432058.479706
[2025-11-20 00:38:31] 2025-11-20 05:37:36,491 | INFO     | chi2: 2.983839060467525
[2025-11-20 00:38:31] 2025-11-20 05:37:36,492 | INFO     | current chi2=2.983839060467525 (change=0.24095202406186406 %)
[2025-11-20 00:38:31] 2025-11-20 05:37:36,492 | INFO     | right removable region: 628
[2025-11-20 00:38:31] 2025-11-20 05:37:36,492 | INFO     | sum of square deviations: 80906617151.97014
[2025-11-20 00:38:31] 2025-11-20 05:37:36,497 | INFO     | sum of deviations: 384449467002.6621
[2025-11-20 00:38:31] 2025-11-20 05:37:36,497 | INFO     | mean x: 1763597562.6103287
[2025-11-20 00:38:31] 2025-11-20 05:37:36,497 | INFO     | mean y: 2845377.323943662
[2025-11-20 00:38:31] 2025-11-20 05:37:36,497 | INFO     | intersect: -8377360924.951601
[2025-11-20 00:38:31] 2025-11-20 05:37:36,497 | INFO     | chi2: 6.3851527157955354
[2025-11-20 00:38:31] 2025-11-20 05:37:36,497 | INFO     | current chi2=6.3851527157955354 (change=30.092206027676205 %)
[2025-11-20 00:38:31] 2025-11-20 05:37:36,498 | INFO     | sum of square deviations: 79022118436.59424
[2025-11-20 00:38:31] 2025-11-20 05:37:36,503 | INFO     | sum of deviations: 345473871020.1657
[2025-11-20 00:38:31] 2025-11-20 05:37:36,503 | INFO     | mean x: 1763597715.1151419
[2025-11-20 00:38:31] 2025-11-20 05:37:36,503 | INFO     | mean y: 2848529.326498423
[2025-11-20 00:38:31] 2025-11-20 05:37:36,503 | INFO     | intersect: -7707358962.162344
[2025-11-20 00:38:31] 2025-11-20 05:37:36,503 | INFO     | chi2: 6.338770385738917
[2025-11-20 00:38:31] 2025-11-20 05:37:36,503 | INFO     | current chi2=6.338770385738917 (change=0.7264090949912386 %)
[2025-11-20 00:38:31] 2025-11-20 05:37:36,503 | INFO     | left removable region: 20
[2025-11-20 00:38:31] 2025-11-20 05:37:36,504 | INFO     | sum of square deviations: 69694097252.15625
[2025-11-20 00:38:31] 2025-11-20 05:37:36,508 | INFO     | sum of deviations: 666250970403.6874
[2025-11-20 00:38:31] 2025-11-20 05:37:36,508 | INFO     | mean x: 1763597532.15625
[2025-11-20 00:38:31] 2025-11-20 05:37:36,508 | INFO     | mean y: 2884033.2664473685
[2025-11-20 00:38:31] 2025-11-20 05:37:36,508 | INFO     | intersect: -16856485892.273363
[2025-11-20 00:38:31] 2025-11-20 05:37:36,509 | INFO     | chi2: 0.09491945449503031
[2025-11-20 00:38:31] 2025-11-20 05:37:36,509 | INFO     | current memory leak: 9.56 B/s (using 608 data points, chi2=0.09)
[2025-11-20 00:38:31] 2025-11-20 05:37:36,509 | INFO     | could have reported an average CPU frequency of 3782 MHz (25 samples)
[2025-11-20 00:38:31] 2025-11-20 05:37:36,510 | INFO     | ..............................
[2025-11-20 00:38:31] 2025-11-20 05:37:36,510 | INFO     | . Timing measurements:
[2025-11-20 00:38:31] 2025-11-20 05:37:36,510 | INFO     | . get job = 0 s
[2025-11-20 00:38:31] 2025-11-20 05:37:36,510 | INFO     | . initial setup = 4 s
[2025-11-20 00:38:31] 2025-11-20 05:37:36,510 | INFO     | . payload setup = 36 s
[2025-11-20 00:38:31] 2025-11-20 05:37:36,510 | INFO     | . stage-in = 0 s
[2025-11-20 00:38:31] 2025-11-20 05:37:36,510 | INFO     | . payload execution = 39259 s
[2025-11-20 00:38:31] 2025-11-20 05:37:36,510 | INFO     | . stage-out = 7 s
[2025-11-20 00:38:31] 2025-11-20 05:37:36,510 | INFO     | . log creation = 1 s
[2025-11-20 00:38:31] 2025-11-20 05:37:36,510 | INFO     | ..............................
[2025-11-20 00:38:31] 2025-11-20 05:37:36,699 | INFO     | 
[2025-11-20 00:38:31] 2025-11-20 05:37:36,699 | INFO     | job summary report
[2025-11-20 00:38:31] 2025-11-20 05:37:36,699 | INFO     | --------------------------------------------------
[2025-11-20 00:38:31] 2025-11-20 05:37:36,699 | INFO     | PanDA job id: 6892526641
[2025-11-20 00:38:31] 2025-11-20 05:37:36,699 | INFO     | task id: 47493029
[2025-11-20 00:38:31] 2025-11-20 05:37:36,699 | INFO     | errors: (none)
[2025-11-20 00:38:31] 2025-11-20 05:37:36,699 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 00:38:31] 2025-11-20 05:37:36,699 | INFO     | pilot state: finished 
[2025-11-20 00:38:31] 2025-11-20 05:37:36,699 | INFO     | transexitcode: 0
[2025-11-20 00:38:31] 2025-11-20 05:37:36,699 | INFO     | exeerrorcode: 0
[2025-11-20 00:38:31] 2025-11-20 05:37:36,699 | INFO     | exeerrordiag: 
[2025-11-20 00:38:31] 2025-11-20 05:37:36,699 | INFO     | exitcode: 0
[2025-11-20 00:38:31] 2025-11-20 05:37:36,700 | INFO     | exitmsg: OK
[2025-11-20 00:38:31] 2025-11-20 05:37:36,700 | INFO     | cpuconsumptiontime: 135982 s
[2025-11-20 00:38:31] 2025-11-20 05:37:36,700 | INFO     | nevents: 1000
[2025-11-20 00:38:31] 2025-11-20 05:37:36,700 | INFO     | neventsw: 0
[2025-11-20 00:38:31] 2025-11-20 05:37:36,700 | INFO     | pid: 1766437
[2025-11-20 00:38:31] 2025-11-20 05:37:36,700 | INFO     | pgrp: 1766437
[2025-11-20 00:38:31] 2025-11-20 05:37:36,700 | INFO     | corecount: 8
[2025-11-20 00:38:31] 2025-11-20 05:37:36,700 | INFO     | event service: False
[2025-11-20 00:38:31] 2025-11-20 05:37:36,700 | INFO     | sizes: {0: 2297029, 1: 2297228, 12: 2297228, 22: 2297256, 23: 2297546, 33: 2297574, 39300: 2340472, 39309: 2349522, 39331: 2349776}
[2025-11-20 00:38:31] 2025-11-20 05:37:36,700 | INFO     | --------------------------------------------------
[2025-11-20 00:38:31] 2025-11-20 05:37:36,700 | INFO     | 
[2025-11-20 00:38:31] 2025-11-20 05:37:36,700 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-20 00:38:31] 2025-11-20 05:37:36,910 | INFO     | time since job start (39383s) is within the limit (172800.0s)
[2025-11-20 00:38:31] 2025-11-20 05:37:36,915 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 00:38:31] 2025-11-20 05:37:36,915 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 00:38:31] 2025-11-20 05:37:36,915 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 00:38:31] 2025-11-20 05:37:36,915 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 00:38:31] 2025-11-20 05:37:36,916 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 00:38:31] 2025-11-20 05:37:36,916 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 00:38:31] 2025-11-20 05:37:36,916 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 00:38:31] 2025-11-20 05:37:36,916 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 00:38:31] 2025-11-20 05:37:36,916 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 00:38:31] 2025-11-20 05:37:36,916 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 00:38:31] 2025-11-20 05:37:36,916 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 00:38:31] 2025-11-20 05:37:36,916 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 00:38:31] 2025-11-20 05:37:36,916 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 00:38:31] 2025-11-20 05:37:36,916 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 00:38:31] 2025-11-20 05:37:36,916 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 00:38:31] 2025-11-20 05:37:36,916 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 00:38:31] 2025-11-20 05:37:36,916 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 00:38:31] 2025-11-20 05:37:36,916 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 00:38:31] 2025-11-20 05:37:36,916 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 00:38:31] 2025-11-20 05:37:36,916 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 00:38:31] 2025-11-20 05:37:36,916 | INFO     | job 6892526641 has completed (purged errors)
[2025-11-20 00:38:31] 2025-11-20 05:37:36,916 | INFO     | overall cleanup function is called
[2025-11-20 00:38:31] 2025-11-20 05:37:37,978 | INFO     | --- collectZombieJob: --- 10, [1766437]
[2025-11-20 00:38:31] 2025-11-20 05:37:37,978 | INFO     | zombie collector waiting for pid 1766437
[2025-11-20 00:38:31] 2025-11-20 05:37:37,978 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 00:38:31] 2025-11-20 05:37:37,978 | INFO     | collected zombie processes
[2025-11-20 00:38:31] 2025-11-20 05:37:37,978 | INFO     | will attempt to kill all subprocesses of pid=1766437
[2025-11-20 00:38:31] 2025-11-20 05:37:40,185 | INFO     | process IDs to be killed: [1766437] (in reverse order)
[2025-11-20 00:38:31] 2025-11-20 05:37:40,409 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 00:38:31] 2025-11-20 05:37:40,409 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 00:38:31] 2025-11-20 05:37:40,448 | INFO     | did not find any defunct processes belonging to 1766437
[2025-11-20 00:38:31] 2025-11-20 05:37:40,513 | INFO     | did not find any defunct processes belonging to 1766437
[2025-11-20 00:38:31] 2025-11-20 05:37:40,514 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 00:38:31] 2025-11-20 05:37:40,515 | INFO     | ready for new job
[2025-11-20 00:38:31] 2025-11-20 05:37:40,515 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 00:38:31] 2025-11-20 05:37:40,517 | INFO     | ***************************************
[2025-11-20 00:38:31] 2025-11-20 05:37:40,517 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 00:38:31] 2025-11-20 05:37:40,517 | INFO     | ***************************************
[2025-11-20 00:38:31] 2025-11-20 05:37:40,517 | INFO     | 
[2025-11-20 00:38:31] 2025-11-20 05:37:40,530 | INFO     | architecture information:
[2025-11-20 00:38:31] 2025-11-20 05:37:40,530 | INFO     | executing command: cat /etc/os-release
[2025-11-20 00:38:31] 2025-11-20 05:37:40,581 | INFO     | cat /etc/os-release:
[2025-11-20 00:38:31] NAME="CentOS Linux"
[2025-11-20 00:38:31] VERSION="7 (Core)"
[2025-11-20 00:38:31] ID="centos"
[2025-11-20 00:38:31] ID_LIKE="rhel fedora"
[2025-11-20 00:38:31] VERSION_ID="7"
[2025-11-20 00:38:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 00:38:31] ANSI_COLOR="0;31"
[2025-11-20 00:38:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 00:38:31] HOME_URL="https://www.centos.org/"
[2025-11-20 00:38:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 00:38:31] 
[2025-11-20 00:38:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 00:38:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 00:38:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 00:38:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 00:38:31] 
[2025-11-20 00:38:31] 2025-11-20 05:37:40,582 | INFO     | ***************************************
[2025-11-20 00:38:31] 2025-11-20 05:37:41,085 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-20 00:38:31] 2025-11-20 05:37:41,133 | INFO     | sufficient remaining disk space (90445971456 B)
[2025-11-20 00:38:31] 2025-11-20 05:37:41,134 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 00:38:31] 2025-11-20 05:37:41,134 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 00:38:31] 2025-11-20 05:37:41,134 | INFO     | update_server=False
[2025-11-20 00:38:31] 2025-11-20 05:37:41,134 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 00:38:31] 2025-11-20 05:37:41,135 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 00:38:31] 2025-11-20 05:37:41,353 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-20 00:38:31] 2025-11-20 05:37:41,353 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-20 00:38:31] 2025-11-20 05:37:41,353 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 00:38:31] 2025-11-20 05:37:41,353 | INFO     | will abort loop
[2025-11-20 00:38:31] 2025-11-20 05:37:41,722 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 00:38:31] 2025-11-20 05:37:41,922 | INFO     | all job control threads have been joined
[2025-11-20 00:38:31] 2025-11-20 05:37:42,140 | INFO     | [job] retrieve thread has finished
[2025-11-20 00:38:31] 2025-11-20 05:37:42,145 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 00:38:31] 2025-11-20 05:37:42,158 | INFO     | all payload control threads have been joined
[2025-11-20 00:38:31] 2025-11-20 05:37:42,218 | INFO     | all data control threads have been joined
[2025-11-20 00:38:31] 2025-11-20 05:37:42,230 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 00:38:31] 2025-11-20 05:37:42,282 | INFO     | [data] copytool_in thread has finished
[2025-11-20 00:38:31] 2025-11-20 05:37:42,359 | INFO     | [job] job monitor thread has finished
[2025-11-20 00:38:31] 2025-11-20 05:37:42,459 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 00:38:31] 2025-11-20 05:37:42,498 | INFO     | [payload] failed_post thread has finished
[2025-11-20 00:38:31] 2025-11-20 05:37:42,733 | INFO     | [job] queue monitor thread has finished
[2025-11-20 00:38:31] 2025-11-20 05:37:42,928 | INFO     | [job] control thread has finished
[2025-11-20 00:38:31] 2025-11-20 05:37:42,948 | INFO     | [payload] validate_post thread has finished
[2025-11-20 00:38:31] 2025-11-20 05:37:43,142 | INFO     | [data] copytool_out thread has finished
[2025-11-20 00:38:31] 2025-11-20 05:37:43,164 | INFO     | [payload] control thread has finished
[2025-11-20 00:38:31] 2025-11-20 05:37:43,191 | INFO     | [job] validate thread has finished
[2025-11-20 00:38:31] 2025-11-20 05:37:43,220 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 00:38:31] 2025-11-20 05:37:43,224 | INFO     | [data] control thread has finished
[2025-11-20 00:38:31] 2025-11-20 05:37:44,019 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 00:38:31] 2025-11-20 05:37:48,042 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 00:38:31] 2025-11-20 05:38:08,983 | INFO     | 39390s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-20 00:38:31] 2025-11-20 05:38:11,222 | INFO     | PID=1719950 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-20 00:38:31] 2025-11-20 05:38:11,222 | INFO     | .. there are 74 such processes running
[2025-11-20 00:38:31] 2025-11-20 05:38:11,222 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 00:38:31] 2025-11-20 05:38:11,222 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 00:38:31] 2025-11-20 05:38:11,222 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 00:38:31] 2025-11-20 05:38:23,755 | INFO     | [monitor] cgroup control has ended
[2025-11-20 00:38:31] 2025-11-20 05:38:23,958 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140041703991104)>', '<ExcThread(monitor, started 140041191925504)>']
[2025-11-20 00:38:31] 2025-11-20 05:38:24,314 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 00:38:31] 2025-11-20 05:38:24,314 | INFO     | [monitor] control thread has ended
[2025-11-20 00:38:31] 2025-11-20 05:38:28,984 | INFO     | all workflow threads have been joined
[2025-11-20 00:38:31] 2025-11-20 05:38:28,984 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 00:38:31] 2025-11-20 05:38:28,984 | INFO     | traces error code: 0
[2025-11-20 00:38:31] 2025-11-20 05:38:28,984 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 00:38:31] 2025-11-20 05:38:29,904 [wrapper] ==== pilot stdout END ====
[2025-11-20 00:38:31] 2025-11-20 05:38:29,915 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 00:38:31] 2025-11-20 05:38:29,918 [wrapper] pilotpid: 1719950
[2025-11-20 00:38:31] 2025-11-20 05:38:29,939 [wrapper] Pilot exit status: 0
[2025-11-20 00:38:31] 2025-11-20 05:38:30,025 [wrapper] pandaids: 6892526641
[2025-11-20 00:38:31] 2025-11-20 05:38:30,506 [wrapper] cleanup supervisor_pilot 1084171 1719951
[2025-11-20 00:38:31] 2025-11-20 05:38:30,529 [wrapper] Test setup, not cleaning
[2025-11-20 00:38:31] 2025-11-20 05:38:30,554 [wrapper] apfmon messages muted
[2025-11-20 00:38:31] 2025-11-20 05:38:30,594 [wrapper] ==== wrapper stdout END ====
[2025-11-20 00:38:31] 2025-11-20 05:38:30,618 [wrapper] ==== wrapper stderr END ====
[2025-11-20 00:38:31]  *** Error codes and diagnostics ***
[2025-11-20 00:38:31]     "exeErrorCode": 0,
[2025-11-20 00:38:31]     "exeErrorDiag": "",
[2025-11-20 00:38:31]     "pilotErrorCode": 0,
[2025-11-20 00:38:31]     "pilotErrorDiag": "",
[2025-11-20 00:38:31]  *** Listing of results directory ***
[2025-11-20 00:38:31] total 1299328
[2025-11-20 00:38:31] -rw-r--r--. 1 boincer umatlas    576529 Nov 19 02:00 pilot3.tar.gz
[2025-11-20 00:38:31] -rw-r--r--. 1 boincer umatlas      5112 Nov 19 02:07 queuedata.json
[2025-11-20 00:38:31] -rwx------. 1 boincer umatlas     36292 Nov 19 02:07 runpilot2-wrapper.sh
[2025-11-20 00:38:31] -rw-r--r--. 1 boincer umatlas       100 Nov 19 13:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 00:38:31] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 19 13:40 run_atlas
[2025-11-20 00:38:31] -rw-r--r--. 1 boincer umatlas       105 Nov 19 13:40 job.xml
[2025-11-20 00:38:31] -rw-r--r--. 2 boincer umatlas 408096396 Nov 19 13:40 EVNT.47493027._000115.pool.root.1
[2025-11-20 00:38:31] drwxrwx--x. 2 boincer umatlas      4096 Nov 19 13:40 shared
[2025-11-20 00:38:31] -rw-r--r--. 2 boincer umatlas    590092 Nov 19 13:40 input.tar.gz
[2025-11-20 00:38:31] -rw-r--r--. 2 boincer umatlas     15120 Nov 19 13:40 start_atlas.sh
[2025-11-20 00:38:31] -rw-r--r--. 1 boincer umatlas         0 Nov 19 13:40 boinc_lockfile
[2025-11-20 00:38:31] -rw-r--r--. 1 boincer umatlas      2773 Nov 19 13:40 pandaJob.out
[2025-11-20 00:38:31] -rw-------. 1 boincer umatlas    989434 Nov 19 13:41 agis_schedconf.cvmfs.json
[2025-11-20 00:38:31] drwx------. 5 boincer umatlas      4096 Nov 19 13:41 pilot3
[2025-11-20 00:38:31] -rw-r--r--. 1 boincer umatlas       533 Nov 20 00:26 boinc_task_state.xml
[2025-11-20 00:38:31] -rw-r--r--. 1 boincer umatlas      7172 Nov 20 00:30 init_data.xml
[2025-11-20 00:38:31] -rw-------. 1 boincer umatlas 905552141 Nov 20 00:36 HITS.47493029._001102.pool.root.1
[2025-11-20 00:38:31] -rw-------. 1 boincer umatlas      1066 Nov 20 00:37 memory_monitor_summary.json
[2025-11-20 00:38:31] -rw-------. 1 boincer umatlas   1525063 Nov 20 00:37 agis_ddmendpoints.agis.ALL.json
[2025-11-20 00:38:31] -rw-------. 1 boincer umatlas   1832939 Nov 20 00:37 log.47493029._001102.job.log.tgz.1
[2025-11-20 00:38:31] -rw-------. 1 boincer umatlas        95 Nov 20 00:37 pilot_heartbeat.json
[2025-11-20 00:38:31] -rw-------. 1 boincer umatlas      8625 Nov 20 00:37 heartbeat.json
[2025-11-20 00:38:31] -rw-r--r--. 1 boincer umatlas      8192 Nov 20 00:38 boinc_mmap_file
[2025-11-20 00:38:31] -rw-------. 1 boincer umatlas      5126 Nov 20 00:38 pilotlog.txt
[2025-11-20 00:38:31] -rw-r--r--. 1 boincer umatlas        29 Nov 20 00:38 wrapper_checkpoint.txt
[2025-11-20 00:38:31] -rw-------. 1 boincer umatlas   4640329 Nov 20 00:38 log.47493029._001102.job.log.1
[2025-11-20 00:38:31] -rw-------. 1 boincer umatlas       353 Nov 20 00:38 output.list
[2025-11-20 00:38:31] -rw-r--r--. 1 boincer umatlas       620 Nov 20 00:38 runtime_log
[2025-11-20 00:38:31] -rw-------. 1 boincer umatlas   6492160 Nov 20 00:38 result.tar.gz
[2025-11-20 00:38:31] -rw-r--r--. 1 boincer umatlas      8694 Nov 20 00:38 runtime_log.err
[2025-11-20 00:38:31] -rw-------. 1 boincer umatlas       663 Nov 20 00:38 4wMKDmKTrf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmNgGKDmEiuKjm.diag
[2025-11-20 00:38:31] -rw-r--r--. 1 boincer umatlas     20502 Nov 20 00:38 stderr.txt
[2025-11-20 00:38:31] HITS file was successfully produced:
[2025-11-20 00:38:31] -rw-------. 1 boincer umatlas 905552141 Nov 20 00:36 shared/HITS.pool.root.1
[2025-11-20 00:38:31]  *** Contents of shared directory: ***
[2025-11-20 00:38:31] total 1289804
[2025-11-20 00:38:31] -rw-r--r--. 2 boincer umatlas 408096396 Nov 19 13:40 ATLAS.root_0
[2025-11-20 00:38:31] -rw-r--r--. 2 boincer umatlas    590092 Nov 19 13:40 input.tar.gz
[2025-11-20 00:38:31] -rw-r--r--. 2 boincer umatlas     15120 Nov 19 13:40 start_atlas.sh
[2025-11-20 00:38:31] -rw-------. 1 boincer umatlas 905552141 Nov 20 00:36 HITS.pool.root.1
[2025-11-20 00:38:31] -rw-------. 1 boincer umatlas   6492160 Nov 20 00:38 result.tar.gz
00:38:53 (1713924): run_atlas exited; CPU time 136627.538925
00:38:53 (1713924): called boinc_finish(0)

</stderr_txt>
]]>

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