Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:01:37 (85229): wrapper (7.7.26015): starting
09:01:37 (85229): wrapper: running run_atlas (--nthreads 8)
[2025-11-19 09:01:37] Arguments: --nthreads 8
[2025-11-19 09:01:37] Threads: 8
[2025-11-19 09:01:37] Checking for CVMFS
[2025-11-19 09:01:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 09:01:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 09:01:39] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 09:01:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 09:01:40] 2.11.3.0 1215219 18577 227356 153051 3 685 37530339 45568000 10369 130560 0 118911375 99.779 86659909 20969 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-11-19 09:01:40] CVMFS is ok
[2025-11-19 09:01:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-19 09:01:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-19 09:01:40] Further information can be found at the LHC@home message board.
[2025-11-19 09:01:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 09:01:40] Checking for apptainer binary...
[2025-11-19 09:01:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 09:01:40] Running /usr/bin/apptainer --version
[2025-11-19 09:01:40] apptainer version 1.4.1-1.el9
[2025-11-19 09:01:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 09:01:40] wns0018.triumf.lcg
[2025-11-19 09:01:40] apptainer works
[2025-11-19 09:01:40] Set ATHENA_PROC_NUMBER=8
[2025-11-19 09:01:40] Set ATHENA_CORE_NUMBER=8
[2025-11-19 09:01:41] Starting ATLAS job with PandaID=6892523186
[2025-11-19 09:01:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-19 09:07:28]  *** The last 200 lines of the pilot log: ***
[2025-11-19 09:07:28] 2025-11-19 17:06:54,016 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-19 09:07:28] 2025-11-19 17:06:54,017 | WARNING  | wrong length of table data, x=[1763571813.0, 1763571874.0], y=[23771.0, 696027.0] (must be same and length>=4)
[2025-11-19 09:07:28] 2025-11-19 17:06:54,018 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-11-19 09:07:28] 2025-11-19 17:06:54,018 | INFO     | ..............................
[2025-11-19 09:07:28] 2025-11-19 17:06:54,018 | INFO     | . Timing measurements:
[2025-11-19 09:07:28] 2025-11-19 17:06:54,018 | INFO     | . get job = 0 s
[2025-11-19 09:07:28] 2025-11-19 17:06:54,018 | INFO     | . initial setup = 7 s
[2025-11-19 09:07:28] 2025-11-19 17:06:54,018 | INFO     | . payload setup = 21 s
[2025-11-19 09:07:28] 2025-11-19 17:06:54,018 | INFO     | . stage-in = 0 s
[2025-11-19 09:07:28] 2025-11-19 17:06:54,018 | INFO     | . payload execution = 86 s
[2025-11-19 09:07:28] 2025-11-19 17:06:54,018 | INFO     | . stage-out = 0 s
[2025-11-19 09:07:28] 2025-11-19 17:06:54,019 | INFO     | . log creation = 0 s
[2025-11-19 09:07:28] 2025-11-19 17:06:54,019 | INFO     | ..............................
[2025-11-19 09:07:28] 2025-11-19 17:06:54,019 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-19 09:07:28] 2025-11-19 17:06:54,019 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6892523186/pilotlog.txt
[2025-11-19 09:07:28] 2025-11-19 17:06:54,039 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-19 09:07:28] - Log from pilotlog.txt -
[2025-11-19 09:07:28] 2025-11-19 17:06:54,015 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6892523186/memory_monitor_summary.json (trf name=prmon)
[2025-11-19 09:07:28] 2025-11-19 17:06:54,016 | INFO     | extracted standard info from prmon json
[2025-11-19 09:07:28] 2025-11-19 17:06:54,016 | INFO     | extracted standard memory fields from prmon json
[2025-11-19 09:07:28] 2025-11-19 17:06:54,016 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-19 09:07:28] 2025-11-19 17:06:54,016 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-19 09:07:28] 2025-11-19 17:06:54,016 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-19 09:07:28] 2025-11-19 17:06:54,017 | WARNING  | wrong length of table data, x=[1763571813.0, 1763571874.0], y=[23771.0, 696027.0] (must be same and length>=4)
[2025-11-19 09:07:28] 2025-11-19 17:06:54,018 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-11-19 09:07:28] 2025-11-19 17:06:54,018 | INFO     | ..............................
[2025-11-19 09:07:28] 2025-11-19 17:06:54,018 | INFO     | . Timing measurements:
[2025-11-19 09:07:28] 2025-11-19 17:06:54,018 | INFO     | . get job = 0 s
[2025-11-19 09:07:28] 2025-11-19 17:06:54,018 | INFO     | . initial setup = 7 s
[2025-11-19 09:07:28] 2025-11-19 17:06:54,018 | INFO     | . payload setup = 21 s
[2025-11-19 09:07:28] 2025-11-19 17:06:54,018 | INFO     | . stage-in = 0 s
[2025-11-19 09:07:28] 2025-11-19 17:06:54,018 | INFO     | . payload execution = 86 s
[2025-11-19 09:07:28] 2025-11-19 17:06:54,018 | INFO     | . stage-out = 0 s
[2025-11-19 09:07:28] 2025-11-19 17:06:54,019 | INFO     | . log creation = 0 s
[2025-11-19 09:07:28] 2025-11-19 17:06:54,019 | INFO     | ..............................
[2025-11-19 09:07:28] 2025-11-19 17:06:54,019 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-19 09:07:28] 2025-11-19 17:06:54,019 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6892523186/pilotlog.txt
[2025-11-19 09:07:28] 2025-11-19 17:06:54,040 | WARNING  | 
[2025-11-19 09:07:28] [begin log extracts]
[2025-11-19 09:07:28] - Log from pilotlog.txt -
[2025-11-19 09:07:28] 2025-11-19 17:06:54,015 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6892523186/memory_monitor_summary.json (trf name=prmon)
[2025-11-19 09:07:28] 2025-11-19 17:06:54,016 | INFO     | extracted standard info from prmon json
[2025-11-19 09:07:28] 2025-11-19 17:06:54,016 | INFO     | extracted standard memory fields from prmon json
[2025-11-19 09:07:28] 2025-11-19 17:06:54,016 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-19 09:07:28] 2025-11-19 17:06:54,016 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-19 09:07:28] 2025-11-19 17:06:54,016 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-19 09:07:28] 2025-11-19 17:06:54,017 | WARNING  | wrong length of table data, x=[1763571813.0, 1763571874.0], y=[23771.0, 696027.0] (must be same and length>=4)
[2025-11-19 09:07:28] 2025-11-19 17:06:54,018 | INFO     | could have reported an average CPU frequency of 2094 MHz (4 samples)
[2025-11-19 09:07:28] 2025-11-19 17:06:54,018 | INFO     | ..............................
[2025-11-19 09:07:28] 2025-11-19 17:06:54,018 | INFO     | . Timing measurements:
[2025-11-19 09:07:28] 2025-11-19 17:06:54,018 | INFO     | . get job = 0 s
[2025-11-19 09:07:28] 2025-11-19 17:06:54,018 | INFO     | . initial setup = 7 s
[2025-11-19 09:07:28] 2025-11-19 17:06:54,018 | INFO     | . payload setup = 21 s
[2025-11-19 09:07:28] 2025-11-19 17:06:54,018 | INFO     | . stage-in = 0 s
[2025-11-19 09:07:28] 2025-11-19 17:06:54,018 | INFO     | . payload execution = 86 s
[2025-11-19 09:07:28] 2025-11-19 17:06:54,018 | INFO     | . stage-out = 0 s
[2025-11-19 09:07:28] 2025-11-19 17:06:54,019 | INFO     | . log creation = 0 s
[2025-11-19 09:07:28] 2025-11-19 17:06:54,019 | INFO     | ..............................
[2025-11-19 09:07:28] 2025-11-19 17:06:54,019 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-19 09:07:28] 2025-11-19 17:06:54,019 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6892523186/pilotlog.txt
[2025-11-19 09:07:28] [end log extracts]
[2025-11-19 09:07:28] 2025-11-19 17:06:54,040 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-19 09:07:28] 2025-11-19 17:06:54,040 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-19 09:07:28] 2025-11-19 17:06:54,147 | INFO     | 
[2025-11-19 09:07:28] 2025-11-19 17:06:54,148 | INFO     | job summary report
[2025-11-19 09:07:28] 2025-11-19 17:06:54,148 | INFO     | --------------------------------------------------
[2025-11-19 09:07:28] 2025-11-19 17:06:54,148 | INFO     | PanDA job id: 6892523186
[2025-11-19 09:07:28] 2025-11-19 17:06:54,148 | INFO     | task id: 47493029
[2025-11-19 09:07:28] 2025-11-19 17:06:54,148 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-19 09:04:39,196 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-19 09:07:28] 2025-11-19 17:06:54,148 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-19 09:07:28] 2025-11-19 17:06:54,148 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-19 09:07:28] 2025-11-19 17:06:54,148 | INFO     | pilot state: failed 
[2025-11-19 09:07:28] 2025-11-19 17:06:54,148 | INFO     | transexitcode: 65
[2025-11-19 09:07:28] 2025-11-19 17:06:54,148 | INFO     | exeerrorcode: 65
[2025-11-19 09:07:28] 2025-11-19 17:06:54,148 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-19 09:07:28] 2025-11-19 17:06:54,148 | INFO     | exitcode: 65
[2025-11-19 09:07:28] 2025-11-19 17:06:54,149 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-19 09:07:28] 2025-11-19 17:06:54,149 | INFO     | cpuconsumptiontime: 48 s
[2025-11-19 09:07:28] 2025-11-19 17:06:54,149 | INFO     | nevents: 0
[2025-11-19 09:07:28] 2025-11-19 17:06:54,149 | INFO     | neventsw: 0
[2025-11-19 09:07:28] 2025-11-19 17:06:54,149 | INFO     | pid: 95543
[2025-11-19 09:07:28] 2025-11-19 17:06:54,149 | INFO     | pgrp: 95543
[2025-11-19 09:07:28] 2025-11-19 17:06:54,150 | INFO     | corecount: 8
[2025-11-19 09:07:28] 2025-11-19 17:06:54,150 | INFO     | event service: False
[2025-11-19 09:07:28] 2025-11-19 17:06:54,150 | INFO     | sizes: {0: 2297022, 1: 2297221, 12: 2297221, 15: 2297511, 23: 2297539, 111: 2323152, 112: 2327442, 114: 2327498, 238: 2327692}
[2025-11-19 09:07:28] 2025-11-19 17:06:54,150 | INFO     | --------------------------------------------------
[2025-11-19 09:07:28] 2025-11-19 17:06:54,150 | INFO     | 
[2025-11-19 09:07:28] 2025-11-19 17:06:54,150 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-19 09:07:28] 2025-11-19 17:06:54,165 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-19 09:07:28] 2025-11-19 17:06:54,165 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-19 09:07:28] 2025-11-19 17:06:54,165 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-19 09:07:28] 2025-11-19 17:06:54,165 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-19 09:07:28] 2025-11-19 17:06:54,165 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-19 09:07:28] 2025-11-19 17:06:54,165 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-19 09:07:28] 2025-11-19 17:06:54,165 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-19 09:07:28] 2025-11-19 17:06:54,165 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-19 09:07:28] 2025-11-19 17:06:54,166 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-19 09:07:28] 2025-11-19 17:06:54,166 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-19 09:07:28] 2025-11-19 17:06:54,166 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-19 09:07:28] 2025-11-19 17:06:54,166 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-19 09:07:28] 2025-11-19 17:06:54,166 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-19 09:07:28] 2025-11-19 17:06:54,166 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-19 09:07:28] 2025-11-19 17:06:54,166 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-19 09:07:28] 2025-11-19 17:06:54,166 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-19 09:07:28] 2025-11-19 17:06:54,166 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-19 09:07:28] 2025-11-19 17:06:54,166 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-19 09:07:28] 2025-11-19 17:06:54,166 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-19 09:07:28] 2025-11-19 17:06:54,166 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-19 09:07:28] 2025-11-19 17:06:54,167 | INFO     | job 6892523186 has completed (purged errors)
[2025-11-19 09:07:28] 2025-11-19 17:06:54,167 | INFO     | overall cleanup function is called
[2025-11-19 09:07:28] 2025-11-19 17:06:55,174 | INFO     | --- collectZombieJob: --- 10, [95543]
[2025-11-19 09:07:28] 2025-11-19 17:06:55,174 | INFO     | zombie collector waiting for pid 95543
[2025-11-19 09:07:28] 2025-11-19 17:06:55,174 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-19 09:07:28] 2025-11-19 17:06:55,174 | INFO     | collected zombie processes
[2025-11-19 09:07:28] 2025-11-19 17:06:55,174 | INFO     | will attempt to kill all subprocesses of pid=95543
[2025-11-19 09:07:28] 2025-11-19 17:06:55,384 | INFO     | process IDs to be killed: [95543] (in reverse order)
[2025-11-19 09:07:28] 2025-11-19 17:06:55,535 | WARNING  | found no corresponding commands to process id(s)
[2025-11-19 09:07:28] 2025-11-19 17:06:55,536 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-19 09:07:28] 2025-11-19 17:06:55,542 | INFO     | did not find any defunct processes belonging to 95543
[2025-11-19 09:07:28] 2025-11-19 17:06:55,547 | INFO     | did not find any defunct processes belonging to 95543
[2025-11-19 09:07:28] 2025-11-19 17:06:55,548 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-19 09:07:28] 2025-11-19 17:06:55,548 | INFO     | ready for new job
[2025-11-19 09:07:28] 2025-11-19 17:06:55,548 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-19 09:07:28] 2025-11-19 17:06:55,549 | INFO     | ***************************************
[2025-11-19 09:07:28] 2025-11-19 17:06:55,549 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-19 09:07:28] 2025-11-19 17:06:55,549 | INFO     | ***************************************
[2025-11-19 09:07:28] 2025-11-19 17:06:55,549 | INFO     | 
[2025-11-19 09:07:28] 2025-11-19 17:06:55,551 | INFO     | architecture information:
[2025-11-19 09:07:28] 2025-11-19 17:06:55,551 | INFO     | executing command: cat /etc/os-release
[2025-11-19 09:07:28] 2025-11-19 17:06:55,561 | INFO     | cat /etc/os-release:
[2025-11-19 09:07:28] NAME="CentOS Linux"
[2025-11-19 09:07:28] VERSION="7 (Core)"
[2025-11-19 09:07:28] ID="centos"
[2025-11-19 09:07:28] ID_LIKE="rhel fedora"
[2025-11-19 09:07:28] VERSION_ID="7"
[2025-11-19 09:07:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-19 09:07:28] ANSI_COLOR="0;31"
[2025-11-19 09:07:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-19 09:07:28] HOME_URL="https://www.centos.org/"
[2025-11-19 09:07:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-19 09:07:28] 
[2025-11-19 09:07:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-19 09:07:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-19 09:07:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-19 09:07:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-19 09:07:28] 
[2025-11-19 09:07:28] 2025-11-19 17:06:55,561 | INFO     | ***************************************
[2025-11-19 09:07:28] 2025-11-19 17:06:56,077 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-19 09:07:28] 2025-11-19 17:06:56,111 | INFO     | sufficient remaining disk space (1238627254272 B)
[2025-11-19 09:07:28] 2025-11-19 17:06:56,111 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-19 09:07:28] 2025-11-19 17:06:56,111 | INFO     | current server update state: UPDATING_FINAL
[2025-11-19 09:07:28] 2025-11-19 17:06:56,111 | INFO     | update_server=False
[2025-11-19 09:07:28] 2025-11-19 17:06:56,112 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-19 09:07:28] 2025-11-19 17:06:56,112 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-19 09:07:28] 2025-11-19 17:06:56,694 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-19 09:07:28] 2025-11-19 17:06:56,694 | INFO     | aborting loop
[2025-11-19 09:07:28] 2025-11-19 17:06:56,704 | INFO     | all job control threads have been joined
[2025-11-19 09:07:28] 2025-11-19 17:06:56,869 | INFO     | all data control threads have been joined
[2025-11-19 09:07:28] 2025-11-19 17:06:57,045 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-19 09:07:28] 2025-11-19 17:06:57,117 | INFO     | [job] retrieve thread has finished
[2025-11-19 09:07:28] 2025-11-19 17:06:57,118 | INFO     | [job] queue monitor thread has finished
[2025-11-19 09:07:28] 2025-11-19 17:06:57,149 | INFO     | all payload control threads have been joined
[2025-11-19 09:07:28] 2025-11-19 17:06:57,160 | INFO     | [payload] failed_post thread has finished
[2025-11-19 09:07:28] 2025-11-19 17:06:57,568 | INFO     | [job] validate thread has finished
[2025-11-19 09:07:28] 2025-11-19 17:06:57,599 | INFO     | [data] copytool_in thread has finished
[2025-11-19 09:07:28] 2025-11-19 17:06:57,699 | INFO     | [job] job monitor thread has finished
[2025-11-19 09:07:28] 2025-11-19 17:06:57,717 | INFO     | [job] control thread has finished
[2025-11-19 09:07:28] 2025-11-19 17:06:57,757 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-19 09:07:28] 2025-11-19 17:06:57,841 | INFO     | [job] create_data_payload thread has finished
[2025-11-19 09:07:28] 2025-11-19 17:06:57,874 | INFO     | [data] control thread has finished
[2025-11-19 09:07:28] 2025-11-19 17:06:57,943 | INFO     | [payload] execute_payloads thread has finished
[2025-11-19 09:07:28] 2025-11-19 17:06:57,993 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-19 09:07:28] 2025-11-19 17:06:58,148 | INFO     | [payload] validate_post thread has finished
[2025-11-19 09:07:28] 2025-11-19 17:06:58,152 | INFO     | [payload] validate_pre thread has finished
[2025-11-19 09:07:28] 2025-11-19 17:06:58,155 | INFO     | [payload] control thread has finished
[2025-11-19 09:07:28] 2025-11-19 17:06:59,052 | INFO     | [data] copytool_out thread has finished
[2025-11-19 09:07:28] 2025-11-19 17:07:02,000 | INFO     | [data] queue_monitor thread has finished
[2025-11-19 09:07:28] 2025-11-19 17:07:18,891 | INFO     | [monitor] cgroup control has ended
[2025-11-19 09:07:28] 2025-11-19 17:07:19,977 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140586455226176)>', '<ExcThread(monitor, started 140585553884928)>']
[2025-11-19 09:07:28] 2025-11-19 17:07:25,013 | INFO     | all workflow threads have been joined
[2025-11-19 09:07:28] 2025-11-19 17:07:25,013 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-19 09:07:28] 2025-11-19 17:07:25,013 | INFO     | traces error code: 0
[2025-11-19 09:07:28] 2025-11-19 17:07:25,014 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-19 09:07:28] 2025-11-19 17:07:27,335 | INFO     | PID=88923 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-19 09:07:28] 2025-11-19 17:07:27,336 | INFO     | .. there are 19 such processes running
[2025-11-19 09:07:28] 2025-11-19 17:07:27,336 | INFO     | found 0 job(s) in 20 queues
[2025-11-19 09:07:28] 2025-11-19 17:07:27,336 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-19 09:07:28] 2025-11-19 17:07:27,336 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-19 09:07:28] 2025-11-19 17:07:27,336 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-19 09:07:28] 2025-11-19 17:07:27,337 | INFO     | [monitor] control thread has ended
[2025-11-19 09:07:28] 2025-11-19 17:07:27,444 [wrapper] ==== pilot stdout END ====
[2025-11-19 09:07:28] 2025-11-19 17:07:27,454 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-19 09:07:28] 2025-11-19 17:07:27,502 [wrapper] pilotpid: 88923
[2025-11-19 09:07:28] 2025-11-19 17:07:27,570 [wrapper] Pilot exit status: 0
[2025-11-19 09:07:28] 2025-11-19 17:07:27,666 [wrapper] pandaids: 6892523186
[2025-11-19 09:07:28] 2025-11-19 17:07:27,794 [wrapper] cleanup supervisor_pilot   88935 88924
[2025-11-19 09:07:28] 2025-11-19 17:07:27,825 [wrapper] Test setup, not cleaning
[2025-11-19 09:07:28] 2025-11-19 17:07:27,858 [wrapper] apfmon messages muted
[2025-11-19 09:07:28] 2025-11-19 17:07:27,905 [wrapper] ==== wrapper stdout END ====
[2025-11-19 09:07:28] 2025-11-19 17:07:27,937 [wrapper] ==== wrapper stderr END ====
[2025-11-19 09:07:28]  *** Error codes and diagnostics ***
[2025-11-19 09:07:28]     "exeErrorCode": 65,
[2025-11-19 09:07:28]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-19 09:07:28]     "pilotErrorCode": 1305,
[2025-11-19 09:07:28]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-19 09:07:28]  *** Listing of results directory ***
[2025-11-19 09:07:28] total 405388
[2025-11-19 09:07:28] -rw-r--r--. 1 boinc boinc    576529 Nov 18 23:00 pilot3.tar.gz
[2025-11-19 09:07:28] -rwx------. 1 boinc boinc     36292 Nov 18 23:06 runpilot2-wrapper.sh
[2025-11-19 09:07:28] -rw-r--r--. 1 boinc boinc      5112 Nov 18 23:07 queuedata.json
[2025-11-19 09:07:28] -rw-r--r--. 1 boinc boinc       100 Nov 19 09:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-19 09:07:28] -rwxr-xr-x. 1 boinc boinc      7986 Nov 19 09:01 run_atlas
[2025-11-19 09:07:28] -rw-r--r--. 1 boinc boinc       105 Nov 19 09:01 job.xml
[2025-11-19 09:07:28] -rw-r--r--. 1 boinc boinc      6445 Nov 19 09:01 init_data.xml
[2025-11-19 09:07:28] -rw-r--r--. 2 boinc boinc 410905513 Nov 19 09:01 EVNT.47493027._000064.pool.root.1
[2025-11-19 09:07:28] -rw-r--r--. 2 boinc boinc     15120 Nov 19 09:01 start_atlas.sh
[2025-11-19 09:07:28] drwxrwx--x. 2 boinc boinc      4096 Nov 19 09:01 shared
[2025-11-19 09:07:28] -rw-r--r--. 2 boinc boinc    590097 Nov 19 09:01 input.tar.gz
[2025-11-19 09:07:28] -rw-r--r--. 1 boinc boinc         0 Nov 19 09:01 boinc_lockfile
[2025-11-19 09:07:28] -rw-r--r--. 1 boinc boinc      2771 Nov 19 09:01 pandaJob.out
[2025-11-19 09:07:28] -rw-------. 1 boinc boinc    989426 Nov 19 09:02 agis_schedconf.cvmfs.json
[2025-11-19 09:07:28] -rw-------. 1 boinc boinc   1525063 Nov 19 09:02 agis_ddmendpoints.agis.ALL.json
[2025-11-19 09:07:28] drwx------. 5 boinc boinc      4096 Nov 19 09:02 pilot3
[2025-11-19 09:07:28] -rw-r--r--. 1 boinc boinc       524 Nov 19 09:04 boinc_task_state.xml
[2025-11-19 09:07:28] -rw-------. 1 boinc boinc       992 Nov 19 09:04 memory_monitor_summary.json
[2025-11-19 09:07:28] -rw-------. 1 boinc boinc     48527 Nov 19 09:04 log.47493029._000592.job.log.tgz.1
[2025-11-19 09:07:28] -rw-------. 1 boinc boinc     10330 Nov 19 09:06 heartbeat.json
[2025-11-19 09:07:28] -rw-r--r--. 1 boinc boinc      8192 Nov 19 09:07 boinc_mmap_file
[2025-11-19 09:07:28] -rw-r--r--. 1 boinc boinc        23 Nov 19 09:07 wrapper_checkpoint.txt
[2025-11-19 09:07:28] -rw-------. 1 boinc boinc       821 Nov 19 09:07 pilotlog.txt
[2025-11-19 09:07:28] -rw-------. 1 boinc boinc        95 Nov 19 09:07 pilot_heartbeat.json
[2025-11-19 09:07:28] -rw-------. 1 boinc boinc    101772 Nov 19 09:07 log.47493029._000592.job.log.1
[2025-11-19 09:07:28] -rw-------. 1 boinc boinc       186 Nov 19 09:07 output.list
[2025-11-19 09:07:28] -rw-r--r--. 1 boinc boinc       620 Nov 19 09:07 runtime_log
[2025-11-19 09:07:28] -rw-------. 1 boinc boinc    174080 Nov 19 09:07 result.tar.gz
[2025-11-19 09:07:28] -rw-------. 1 boinc boinc       645 Nov 19 09:07 ta1KDm6Rrf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmWrFKDmZq58Kn.diag
[2025-11-19 09:07:28] -rw-r--r--. 1 boinc boinc      8526 Nov 19 09:07 runtime_log.err
[2025-11-19 09:07:28] -rw-r--r--. 1 boinc boinc     22470 Nov 19 09:07 stderr.txt
[2025-11-19 09:07:28] No HITS result produced
[2025-11-19 09:07:28]  *** Contents of shared directory: ***
[2025-11-19 09:07:28] total 402044
[2025-11-19 09:07:28] -rw-r--r--. 2 boinc boinc 410905513 Nov 19 09:01 ATLAS.root_0
[2025-11-19 09:07:28] -rw-r--r--. 2 boinc boinc     15120 Nov 19 09:01 start_atlas.sh
[2025-11-19 09:07:28] -rw-r--r--. 2 boinc boinc    590097 Nov 19 09:01 input.tar.gz
[2025-11-19 09:07:28] -rw-------. 1 boinc boinc    174080 Nov 19 09:07 result.tar.gz
09:07:30 (85229): run_atlas exited; CPU time 51.519319
09:07:30 (85229): called boinc_finish(0)

</stderr_txt>
]]>

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