Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:08:53 (1828104): wrapper (7.7.26015): starting
01:08:53 (1828104): wrapper: running run_atlas (--nthreads 4)
[2025-11-21 01:08:53] Arguments: --nthreads 4
[2025-11-21 01:08:53] Threads: 4
[2025-11-21 01:08:53] Checking for CVMFS
[2025-11-21 01:08:53] No cvmfs_config command found, will try listing directly
[2025-11-21 01:08:53] CVMFS is ok
[2025-11-21 01:08:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 01:08:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 01:08:53] Further information can be found at the LHC@home message board.
[2025-11-21 01:08:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 01:08:53] Checking for apptainer binary...
[2025-11-21 01:08:53] which: no apptainer in ((null))
[2025-11-21 01:08:53] apptainer is not installed, using version from CVMFS
[2025-11-21 01:08:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 01:08:53] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-11-21 01:08:53] apptainer works
[2025-11-21 01:08:53] Set ATHENA_PROC_NUMBER=4
[2025-11-21 01:08:53] Set ATHENA_CORE_NUMBER=4
[2025-11-21 01:08:53] Starting ATLAS job with PandaID=6892549337
[2025-11-21 01:08:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 19:18:03]  *** The last 200 lines of the pilot log: ***
[2025-11-21 19:18:03] 2025-11-21 18:00:15,079 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 19:18:03] 2025-11-21 18:00:16,248 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-21 19:18:03] 2025-11-21 18:00:16,259 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2732.4265937500004
[2025-11-21 19:18:03] 2025-11-21 18:00:16,271 | INFO     | using path: /scratch/boinc/var/slot52/slots/1/PanDA_Pilot-6892549337/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 19:18:03] 2025-11-21 18:00:16,272 | INFO     | extracted standard info from prmon json
[2025-11-21 19:18:03] 2025-11-21 18:00:16,272 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 19:18:03] 2025-11-21 18:00:16,272 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 19:18:03] 2025-11-21 18:00:16,291 | INFO     | fitting pss+swap vs Time
[2025-11-21 19:18:03] 2025-11-21 18:00:16,292 | INFO     | sum of square deviations: 362047418875.1987
[2025-11-21 19:18:03] 2025-11-21 18:00:16,315 | INFO     | sum of deviations: 984712032812.3219
[2025-11-21 19:18:03] 2025-11-21 18:00:16,315 | INFO     | mean x: 1763715858.1405509
[2025-11-21 19:18:03] 2025-11-21 18:00:16,315 | INFO     | mean y: 2279617.1329534664
[2025-11-21 19:18:03] 2025-11-21 18:00:16,315 | INFO     | intersect: -4794750101.705026
[2025-11-21 19:18:03] 2025-11-21 18:00:16,316 | INFO     | chi2: 3.5327348948471724
[2025-11-21 19:18:03] 2025-11-21 18:00:16,318 | INFO     | sum of square deviations: 356914567775.0991
[2025-11-21 19:18:03] 2025-11-21 18:00:16,340 | INFO     | sum of deviations: 1172820766118.5356
[2025-11-21 19:18:03] 2025-11-21 18:00:16,340 | INFO     | mean x: 1763715705.6412213
[2025-11-21 19:18:03] 2025-11-21 18:00:16,340 | INFO     | mean y: 2285200.145038168
[2025-11-21 19:18:03] 2025-11-21 18:00:16,340 | INFO     | intersect: -5793282120.068294
[2025-11-21 19:18:03] 2025-11-21 18:00:16,342 | INFO     | chi2: 1.8337223257477353
[2025-11-21 19:18:03] 2025-11-21 18:00:16,342 | INFO     | current chi2=1.8337223257477353 (change=48.09340694026057 %)
[2025-11-21 19:18:03] 2025-11-21 18:00:16,343 | INFO     | sum of square deviations: 351830461774.9992
[2025-11-21 19:18:03] 2025-11-21 18:00:16,365 | INFO     | sum of deviations: 1162597853401.3816
[2025-11-21 19:18:03] 2025-11-21 18:00:16,366 | INFO     | mean x: 1763715553.1418984
[2025-11-21 19:18:03] 2025-11-21 18:00:16,366 | INFO     | mean y: 2284893.524448706
[2025-11-21 19:18:03] 2025-11-21 18:00:16,366 | INFO     | intersect: -5825783278.141487
[2025-11-21 19:18:03] 2025-11-21 18:00:16,367 | INFO     | chi2: 1.8326552771355695
[2025-11-21 19:18:03] 2025-11-21 18:00:16,367 | INFO     | current chi2=1.8326552771355695 (change=0.05819030488875506 %)
[2025-11-21 19:18:03] 2025-11-21 18:00:16,367 | INFO     | right removable region: 1042
[2025-11-21 19:18:03] 2025-11-21 18:00:16,369 | INFO     | sum of square deviations: 356914477495.09906
[2025-11-21 19:18:03] 2025-11-21 18:00:16,391 | INFO     | sum of deviations: 806783554706.8022
[2025-11-21 19:18:03] 2025-11-21 18:00:16,391 | INFO     | mean x: 1763716010.6412213
[2025-11-21 19:18:03] 2025-11-21 18:00:16,391 | INFO     | mean y: 2284893.967557252
[2025-11-21 19:18:03] 2025-11-21 18:00:16,391 | INFO     | intersect: -3984488303.199721
[2025-11-21 19:18:03] 2025-11-21 18:00:16,393 | INFO     | chi2: 1.8356724456089322
[2025-11-21 19:18:03] 2025-11-21 18:00:16,393 | INFO     | current chi2=1.8356724456089322 (change=48.03820551928666 %)
[2025-11-21 19:18:03] 2025-11-21 18:00:16,394 | INFO     | sum of square deviations: 351830281214.99896
[2025-11-21 19:18:03] 2025-11-21 18:00:16,416 | INFO     | sum of deviations: 763877489294.8203
[2025-11-21 19:18:03] 2025-11-21 18:00:16,416 | INFO     | mean x: 1763716163.1418984
[2025-11-21 19:18:03] 2025-11-21 18:00:16,416 | INFO     | mean y: 2286180.534995206
[2025-11-21 19:18:03] 2025-11-21 18:00:16,416 | INFO     | intersect: -3827012053.479808
[2025-11-21 19:18:03] 2025-11-21 18:00:16,417 | INFO     | chi2: 1.797505876796977
[2025-11-21 19:18:03] 2025-11-21 18:00:16,418 | INFO     | current chi2=1.797505876796977 (change=2.0791600867165907 %)
[2025-11-21 19:18:03] 2025-11-21 18:00:16,418 | INFO     | left removable region: 20
[2025-11-21 19:18:03] 2025-11-21 18:00:16,419 | INFO     | sum of square deviations: 331003903476.0681
[2025-11-21 19:18:03] 2025-11-21 18:00:16,440 | INFO     | sum of deviations: 883013820260.4156
[2025-11-21 19:18:03] 2025-11-21 18:00:16,440 | INFO     | mean x: 1763716132.644814
[2025-11-21 19:18:03] 2025-11-21 18:00:16,440 | INFO     | mean y: 2293290.5410958906
[2025-11-21 19:18:03] 2025-11-21 18:00:16,440 | INFO     | intersect: -4702744033.147819
[2025-11-21 19:18:03] 2025-11-21 18:00:16,442 | INFO     | chi2: 0.07220990237056163
[2025-11-21 19:18:03] 2025-11-21 18:00:16,442 | INFO     | current memory leak: 2.67 B/s (using 1022 data points, chi2=0.07)
[2025-11-21 19:18:03] 2025-11-21 18:00:16,443 | INFO     | could have reported an average CPU frequency of 2680 MHz (39 samples)
[2025-11-21 19:18:03] 2025-11-21 18:00:16,443 | INFO     | ..............................
[2025-11-21 19:18:03] 2025-11-21 18:00:16,444 | INFO     | . Timing measurements:
[2025-11-21 19:18:03] 2025-11-21 18:00:16,444 | INFO     | . get job = 0 s
[2025-11-21 19:18:03] 2025-11-21 18:00:16,444 | INFO     | . initial setup = 1 s
[2025-11-21 19:18:03] 2025-11-21 18:00:16,444 | INFO     | . payload setup = 6 s
[2025-11-21 19:18:03] 2025-11-21 18:00:16,444 | INFO     | . stage-in = 0 s
[2025-11-21 19:18:03] 2025-11-21 18:00:16,444 | INFO     | . payload execution = 64232 s
[2025-11-21 19:18:03] 2025-11-21 18:00:16,444 | INFO     | . stage-out = 2 s
[2025-11-21 19:18:03] 2025-11-21 18:00:16,444 | INFO     | . log creation = 0 s
[2025-11-21 19:18:03] 2025-11-21 18:00:16,444 | INFO     | ..............................
[2025-11-21 19:18:03] 2025-11-21 18:00:16,828 | INFO     | time since job start (64272s) is within the limit (172800.0s)
[2025-11-21 19:18:03] 2025-11-21 18:00:16,880 | INFO     | 
[2025-11-21 19:18:03] 2025-11-21 18:00:16,880 | INFO     | job summary report
[2025-11-21 19:18:03] 2025-11-21 18:00:16,880 | INFO     | --------------------------------------------------
[2025-11-21 19:18:03] 2025-11-21 18:00:16,880 | INFO     | PanDA job id: 6892549337
[2025-11-21 19:18:03] 2025-11-21 18:00:16,880 | INFO     | task id: 47493029
[2025-11-21 19:18:03] 2025-11-21 18:00:16,880 | INFO     | errors: (none)
[2025-11-21 19:18:03] 2025-11-21 18:00:16,881 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 19:18:03] 2025-11-21 18:00:16,881 | INFO     | pilot state: finished 
[2025-11-21 19:18:03] 2025-11-21 18:00:16,881 | INFO     | transexitcode: 0
[2025-11-21 19:18:03] 2025-11-21 18:00:16,881 | INFO     | exeerrorcode: 0
[2025-11-21 19:18:03] 2025-11-21 18:00:16,881 | INFO     | exeerrordiag: 
[2025-11-21 19:18:03] 2025-11-21 18:00:16,881 | INFO     | exitcode: 0
[2025-11-21 19:18:03] 2025-11-21 18:00:16,881 | INFO     | exitmsg: OK
[2025-11-21 19:18:03] 2025-11-21 18:00:16,881 | INFO     | cpuconsumptiontime: 246416 s
[2025-11-21 19:18:03] 2025-11-21 18:00:16,881 | INFO     | nevents: 1000
[2025-11-21 19:18:03] 2025-11-21 18:00:16,881 | INFO     | neventsw: 0
[2025-11-21 19:18:03] 2025-11-21 18:00:16,881 | INFO     | pid: 1839401
[2025-11-21 19:18:03] 2025-11-21 18:00:16,881 | INFO     | pgrp: 1839401
[2025-11-21 19:18:03] 2025-11-21 18:00:16,882 | INFO     | corecount: 4
[2025-11-21 19:18:03] 2025-11-21 18:00:16,882 | INFO     | event service: False
[2025-11-21 19:18:03] 2025-11-21 18:00:16,882 | INFO     | sizes: {0: 2298807, 1: 2298807, 5: 2299097, 11: 2299153, 64242: 2355107, 64245: 2364123, 64248: 2364307, 64256: 2364553}
[2025-11-21 19:18:03] 2025-11-21 18:00:16,882 | INFO     | --------------------------------------------------
[2025-11-21 19:18:03] 2025-11-21 18:00:16,882 | INFO     | 
[2025-11-21 19:18:03] 2025-11-21 18:00:16,882 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/1
[2025-11-21 19:18:03] 2025-11-21 18:00:16,905 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 19:18:03] 2025-11-21 18:00:16,905 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 19:18:03] 2025-11-21 18:00:16,905 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 19:18:03] 2025-11-21 18:00:16,905 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 19:18:03] 2025-11-21 18:00:16,906 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 19:18:03] 2025-11-21 18:00:16,906 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 19:18:03] 2025-11-21 18:00:16,906 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 19:18:03] 2025-11-21 18:00:16,906 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 19:18:03] 2025-11-21 18:00:16,906 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 19:18:03] 2025-11-21 18:00:16,906 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 19:18:03] 2025-11-21 18:00:16,906 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 19:18:03] 2025-11-21 18:00:16,906 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 19:18:03] 2025-11-21 18:00:16,906 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 19:18:03] 2025-11-21 18:00:16,906 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 19:18:03] 2025-11-21 18:00:16,906 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 19:18:03] 2025-11-21 18:00:16,906 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 19:18:03] 2025-11-21 18:00:16,906 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 19:18:03] 2025-11-21 18:00:16,906 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 19:18:03] 2025-11-21 18:00:16,907 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 19:18:03] 2025-11-21 18:00:16,907 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 19:18:03] 2025-11-21 18:00:16,907 | INFO     | job 6892549337 has completed (purged errors)
[2025-11-21 19:18:03] 2025-11-21 18:00:16,907 | INFO     | overall cleanup function is called
[2025-11-21 19:18:03] 2025-11-21 18:00:17,920 | INFO     | --- collectZombieJob: --- 10, [1839401]
[2025-11-21 19:18:03] 2025-11-21 18:00:17,920 | INFO     | zombie collector waiting for pid 1839401
[2025-11-21 19:18:03] 2025-11-21 18:00:17,920 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 19:18:03] 2025-11-21 18:00:17,920 | INFO     | collected zombie processes
[2025-11-21 19:18:03] 2025-11-21 18:00:17,920 | INFO     | will attempt to kill all subprocesses of pid=1839401
[2025-11-21 19:18:03] 2025-11-21 18:00:18,312 | INFO     | process IDs to be killed: [1839401] (in reverse order)
[2025-11-21 19:18:03] 2025-11-21 18:00:18,439 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 19:18:03] 2025-11-21 18:00:18,440 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 19:18:03] 2025-11-21 18:00:18,454 | INFO     | did not find any defunct processes belonging to 1839401
[2025-11-21 19:18:03] 2025-11-21 18:00:18,468 | INFO     | did not find any defunct processes belonging to 1839401
[2025-11-21 19:18:03] 2025-11-21 18:00:18,469 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 19:18:03] 2025-11-21 18:00:18,470 | INFO     | ready for new job
[2025-11-21 19:18:03] 2025-11-21 18:00:18,470 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 19:18:03] 2025-11-21 18:00:18,475 | INFO     | ***************************************
[2025-11-21 19:18:03] 2025-11-21 18:00:18,475 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 19:18:03] 2025-11-21 18:00:18,475 | INFO     | ***************************************
[2025-11-21 19:18:03] 2025-11-21 18:00:18,475 | INFO     | 
[2025-11-21 19:18:03] 2025-11-21 18:00:18,479 | INFO     | architecture information:
[2025-11-21 19:18:03] 2025-11-21 18:00:18,480 | INFO     | executing command: cat /etc/os-release
[2025-11-21 19:18:03] 2025-11-21 18:00:18,496 | INFO     | cat /etc/os-release:
[2025-11-21 19:18:03] NAME="CentOS Linux"
[2025-11-21 19:18:03] VERSION="7 (Core)"
[2025-11-21 19:18:03] ID="centos"
[2025-11-21 19:18:03] ID_LIKE="rhel fedora"
[2025-11-21 19:18:03] VERSION_ID="7"
[2025-11-21 19:18:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 19:18:03] ANSI_COLOR="0;31"
[2025-11-21 19:18:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 19:18:03] HOME_URL="https://www.centos.org/"
[2025-11-21 19:18:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 19:18:03] 
[2025-11-21 19:18:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 19:18:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 19:18:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 19:18:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 19:18:03] 
[2025-11-21 19:18:03] 2025-11-21 18:00:18,497 | INFO     | ***************************************
[2025-11-21 19:18:03] 2025-11-21 18:00:18,999 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/1
[2025-11-21 19:18:03] 2025-11-21 18:00:19,014 | INFO     | sufficient remaining disk space (666454982656 B)
[2025-11-21 19:18:03] 2025-11-21 18:00:19,016 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 19:18:03] 2025-11-21 18:00:19,017 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 19:18:03] 2025-11-21 18:00:19,018 | INFO     | update_server=False
[2025-11-21 19:18:03] 2025-11-21 18:00:19,018 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 19:18:03] 2025-11-21 18:00:19,018 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 19:18:03] 2025-11-21 18:00:19,018 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 19:18:03] 2025-11-21 18:00:19,018 | INFO     | aborting loop
[2025-11-21 19:18:03] 2025-11-21 18:00:19,034 | INFO     | all data control threads have been joined
[2025-11-21 19:18:03] 2025-11-21 18:00:19,367 | INFO     | all payload control threads have been joined
[2025-11-21 19:18:03] 2025-11-21 18:00:19,382 | INFO     | all job control threads have been joined
[2025-11-21 19:18:03] 2025-11-21 18:00:19,809 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 19:18:03] 2025-11-21 18:00:20,023 | INFO     | [job] retrieve thread has finished
[2025-11-21 19:18:03] 2025-11-21 18:00:20,024 | INFO     | [job] job monitor thread has finished
[2025-11-21 19:18:03] 2025-11-21 18:00:20,039 | INFO     | [data] control thread has finished
[2025-11-21 19:18:03] 2025-11-21 18:00:20,372 | INFO     | [payload] control thread has finished
[2025-11-21 19:18:03] 2025-11-21 18:00:20,388 | INFO     | [job] control thread has finished
[2025-11-21 19:18:03] 2025-11-21 18:00:20,398 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 19:18:03] 2025-11-21 18:00:20,472 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 19:18:03] 2025-11-21 18:00:20,641 | INFO     | [payload] failed_post thread has finished
[2025-11-21 19:18:03] 2025-11-21 18:00:21,024 | INFO     | [data] copytool_out thread has finished
[2025-11-21 19:18:03] 2025-11-21 18:00:21,181 | INFO     | [data] copytool_in thread has finished
[2025-11-21 19:18:03] 2025-11-21 18:00:21,360 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 19:18:03] 2025-11-21 18:00:21,493 | INFO     | [job] validate thread has finished
[2025-11-21 19:18:03] 2025-11-21 18:00:21,551 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 19:18:03] 2025-11-21 18:00:21,611 | INFO     | [payload] validate_post thread has finished
[2025-11-21 19:18:03] 2025-11-21 18:00:22,556 | INFO     | [job] queue monitor thread has finished
[2025-11-21 19:18:03] 2025-11-21 18:00:23,812 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 19:18:03] 2025-11-21 18:00:29,633 | INFO     | job.realtimelogging is not enabled
[2025-11-21 19:18:03] 2025-11-21 18:00:30,638 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 19:18:03] 2025-11-21 18:00:50,390 | INFO     | PID=1832429 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 19:18:03] 2025-11-21 18:00:50,393 | INFO     | .. there are 5 such processes running
[2025-11-21 19:18:03] 2025-11-21 18:00:50,394 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 19:18:03] 2025-11-21 18:00:50,394 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 19:18:03] 2025-11-21 18:00:50,394 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 19:18:03] 2025-11-21 18:00:53,092 | INFO     | [monitor] cgroup control has ended
[2025-11-21 19:18:03] 2025-11-21 18:00:54,511 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23228845082432)>', '<ExcThread(monitor, started 23228607072000)>']
[2025-11-21 19:18:03] 2025-11-21 18:00:55,419 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 19:18:03] 2025-11-21 18:00:55,420 | INFO     | [monitor] control thread has ended
[2025-11-21 19:18:03] 2025-11-21 18:00:59,536 | INFO     | all workflow threads have been joined
[2025-11-21 19:18:03] 2025-11-21 18:00:59,536 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 19:18:03] 2025-11-21 18:00:59,536 | INFO     | traces error code: 0
[2025-11-21 19:18:03] 2025-11-21 18:00:59,537 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 19:18:03] 2025-11-21 18:00:59,720 [wrapper] ==== pilot stdout END ====
[2025-11-21 19:18:03] 2025-11-21 18:00:59,723 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 19:18:03] 2025-11-21 18:00:59,726 [wrapper] pilotpid: 1832429
[2025-11-21 19:18:03] 2025-11-21 18:00:59,729 [wrapper] Pilot exit status: 0
[2025-11-21 19:18:03] 2025-11-21 18:00:59,739 [wrapper] pandaids: 6892549337
[2025-11-21 19:18:03] 2025-11-21 18:00:59,823 [wrapper] cleanup supervisor_pilot 2915709 1832430
[2025-11-21 19:18:03] 2025-11-21 18:00:59,827 [wrapper] Test setup, not cleaning
[2025-11-21 19:18:03] 2025-11-21 18:00:59,830 [wrapper] apfmon messages muted
[2025-11-21 19:18:03] 2025-11-21 18:00:59,833 [wrapper] ==== wrapper stdout END ====
[2025-11-21 19:18:03] 2025-11-21 18:00:59,835 [wrapper] ==== wrapper stderr END ====
[2025-11-21 19:18:03]  *** Error codes and diagnostics ***
[2025-11-21 19:18:03]     "exeErrorCode": 0,
[2025-11-21 19:18:03]     "exeErrorDiag": "",
[2025-11-21 19:18:03]     "pilotErrorCode": 0,
[2025-11-21 19:18:03]     "pilotErrorDiag": "",
[2025-11-21 19:18:03]  *** Listing of results directory ***
[2025-11-21 19:18:03] total 1305612
[2025-11-21 19:18:03] -rw-r--r-- 1 boinc boinc    598293 Nov  6 09:41 pilot3.tar.gz
[2025-11-21 19:18:03] -rwx------ 1 boinc boinc     36292 Nov 19 09:52 runpilot2-wrapper.sh
[2025-11-21 19:18:03] -rw-r--r-- 1 boinc boinc      5112 Nov 19 09:52 queuedata.json
[2025-11-21 19:18:03] -rw-r--r-- 1 boinc boinc       100 Nov 20 23:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 19:18:03] -rwxr-xr-x 1 boinc boinc      7986 Nov 20 23:54 run_atlas
[2025-11-21 19:18:03] -rw-r--r-- 1 boinc boinc       105 Nov 20 23:54 job.xml
[2025-11-21 19:18:03] -rw-r--r-- 2 boinc boinc 409573586 Nov 21 01:08 EVNT.47493027._000358.pool.root.1
[2025-11-21 19:18:03] -rw-r--r-- 1 boinc boinc      6634 Nov 21 01:08 init_data.xml
[2025-11-21 19:18:03] -rw-r--r-- 2 boinc boinc     15120 Nov 21 01:08 start_atlas.sh
[2025-11-21 19:18:03] drwxrwx--x 2 boinc boinc      4096 Nov 21 01:08 shared
[2025-11-21 19:18:03] -rw-r--r-- 2 boinc boinc    611267 Nov 21 01:08 input.tar.gz
[2025-11-21 19:18:03] -rw-r--r-- 1 boinc boinc         0 Nov 21 01:08 boinc_lockfile
[2025-11-21 19:18:03] -rw-r--r-- 1 boinc boinc      2773 Nov 21 01:08 pandaJob.out
[2025-11-21 19:18:03] -rw------- 1 boinc boinc    989817 Nov 21 01:09 agis_schedconf.cvmfs.json
[2025-11-21 19:18:03] drwx------ 7 boinc boinc      4096 Nov 21 01:09 pilot3
[2025-11-21 19:18:03] -rw-r--r-- 1 boinc boinc       531 Nov 21 18:54 boinc_task_state.xml
[2025-11-21 19:18:03] -rw------- 1 boinc boinc 901977279 Nov 21 18:59 HITS.47493029._003534.pool.root.1
[2025-11-21 19:18:03] -rw------- 1 boinc boinc      1045 Nov 21 18:59 memory_monitor_summary.json
[2025-11-21 19:18:03] -rw------- 1 boinc boinc   1526164 Nov 21 19:00 agis_ddmendpoints.agis.ALL.json
[2025-11-21 19:18:03] -rw------- 1 boinc boinc   1783383 Nov 21 19:00 log.47493029._003534.job.log.tgz.1
[2025-11-21 19:18:03] -rw------- 1 boinc boinc      8628 Nov 21 19:00 heartbeat.json
[2025-11-21 19:18:03] -rw------- 1 boinc boinc        95 Nov 21 19:00 pilot_heartbeat.json
[2025-11-21 19:18:03] -rw------- 1 boinc boinc      4905 Nov 21 19:00 pilotlog.txt
[2025-11-21 19:18:03] -rw------- 1 boinc boinc   8932355 Nov 21 19:00 log.47493029._003534.job.log.1
[2025-11-21 19:18:03] -rw------- 1 boinc boinc       353 Nov 21 19:00 output.list
[2025-11-21 19:18:03] -rw-r--r-- 1 boinc boinc       620 Nov 21 19:00 runtime_log
[2025-11-21 19:18:03] -rw------- 1 boinc boinc  10731520 Nov 21 19:00 result.tar.gz
[2025-11-21 19:18:03] -rw-r--r-- 1 boinc boinc      9070 Nov 21 19:00 runtime_log.err
[2025-11-21 19:18:03] -rw------- 1 boinc boinc       670 Nov 21 19:00 SsgKDmO6sf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmz6GKDmETjkZm.diag
[2025-11-21 19:18:03] -rw-r--r-- 1 boinc boinc        28 Nov 21 19:17 wrapper_checkpoint.txt
[2025-11-21 19:18:03] -rw-r--r-- 1 boinc boinc      8192 Nov 21 19:18 boinc_mmap_file
[2025-11-21 19:18:03] -rw-r--r-- 1 boinc boinc     21101 Nov 21 19:18 stderr.txt
[2025-11-21 19:18:03] HITS file was successfully produced:
[2025-11-21 19:18:03] -rw------- 1 boinc boinc 901977279 Nov 21 18:59 shared/HITS.pool.root.1
[2025-11-21 19:18:03]  *** Contents of shared directory: ***
[2025-11-21 19:18:03] total 1291920
[2025-11-21 19:18:03] -rw-r--r-- 2 boinc boinc 409573586 Nov 21 01:08 ATLAS.root_0
[2025-11-21 19:18:03] -rw-r--r-- 2 boinc boinc     15120 Nov 21 01:08 start_atlas.sh
[2025-11-21 19:18:03] -rw-r--r-- 2 boinc boinc    611267 Nov 21 01:08 input.tar.gz
[2025-11-21 19:18:03] -rw------- 1 boinc boinc 901977279 Nov 21 18:59 HITS.pool.root.1
[2025-11-21 19:18:03] -rw------- 1 boinc boinc  10731520 Nov 21 19:00 result.tar.gz
19:18:05 (1828104): run_atlas exited; CPU time 248878.698075
19:18:05 (1828104): called boinc_finish(0)

</stderr_txt>
]]>

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