Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
00:22:08 (2076219): wrapper (7.7.26015): starting
00:22:08 (2076219): wrapper: running run_atlas (--nthreads 3)
[2025-11-26 00:22:08] Arguments: --nthreads 3
[2025-11-26 00:22:08] Threads: 3
[2025-11-26 00:22:08] Checking for CVMFS
[2025-11-26 00:22:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 00:22:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 00:22:09] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 00:22:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 00:22:09] 2.12.7.0 42853 11036 66876 153302 1 72 2462362 4096001 839 130560 31 6091832 99.897 808598 531 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.42:3128 1
[2025-11-26 00:22:09] CVMFS is ok
[2025-11-26 00:22:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 00:22:09] Checking for apptainer binary...
[2025-11-26 00:22:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 00:22:09] Running /usr/bin/apptainer --version
[2025-11-26 00:22:09] apptainer version 1.4.2
[2025-11-26 00:22:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 00:22:09] TS-P320
[2025-11-26 00:22:09] apptainer works
[2025-11-26 00:22:09] Set ATHENA_PROC_NUMBER=3
[2025-11-26 00:22:09] Set ATHENA_CORE_NUMBER=3
[2025-11-26 00:22:09] Starting ATLAS job with PandaID=6892549568
[2025-11-26 00:22:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 13:50:39]  *** The last 200 lines of the pilot log: ***
[2025-11-26 13:50:39] 2025-11-26 12:50:15,880 | INFO     | fitting pss+swap vs Time
[2025-11-26 13:50:39] 2025-11-26 12:50:15,881 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-11-26 13:50:39] 2025-11-26 12:50:15,882 | INFO     | sum of square deviations: 155804186390.0
[2025-11-26 13:50:39] 2025-11-26 12:50:15,892 | INFO     | sum of deviations: 347611694081.99994
[2025-11-26 13:50:39] 2025-11-26 12:50:15,892 | INFO     | mean x: 1764137171.0
[2025-11-26 13:50:39] 2025-11-26 12:50:15,892 | INFO     | mean y: 2196518.1710691825
[2025-11-26 13:50:39] 2025-11-26 12:50:15,892 | INFO     | intersect: -3933735659.3464417
[2025-11-26 13:50:39] 2025-11-26 12:50:15,893 | INFO     | chi2: 2.6964314632948043
[2025-11-26 13:50:39] 2025-11-26 12:50:15,893 | INFO     | sum of square deviations: 152882931617.5
[2025-11-26 13:50:39] 2025-11-26 12:50:15,903 | INFO     | sum of deviations: 434455873961.99994
[2025-11-26 13:50:39] 2025-11-26 12:50:15,904 | INFO     | mean x: 1764137018.5
[2025-11-26 13:50:39] 2025-11-26 12:50:15,904 | INFO     | mean y: 2201034.524050633
[2025-11-26 13:50:39] 2025-11-26 12:50:15,904 | INFO     | intersect: -5011044604.163078
[2025-11-26 13:50:39] 2025-11-26 12:50:15,905 | INFO     | chi2: 1.4699173187033012
[2025-11-26 13:50:39] 2025-11-26 12:50:15,905 | INFO     | current chi2=1.4699173187033012 (change=45.48656849941996 %)
[2025-11-26 13:50:39] 2025-11-26 12:50:15,906 | INFO     | sum of square deviations: 149998421720.0
[2025-11-26 13:50:39] 2025-11-26 12:50:15,915 | INFO     | sum of deviations: 428694567922.0
[2025-11-26 13:50:39] 2025-11-26 12:50:15,916 | INFO     | mean x: 1764136866.0
[2025-11-26 13:50:39] 2025-11-26 12:50:15,916 | INFO     | mean y: 2200729.9286624203
[2025-11-26 13:50:39] 2025-11-26 12:50:15,916 | INFO     | intersect: -5039691597.024425
[2025-11-26 13:50:39] 2025-11-26 12:50:15,917 | INFO     | chi2: 1.469792094340157
[2025-11-26 13:50:39] 2025-11-26 12:50:15,917 | INFO     | current chi2=1.469792094340157 (change=0.00851914332533233 %)
[2025-11-26 13:50:39] 2025-11-26 12:50:15,917 | INFO     | right removable region: 784
[2025-11-26 13:50:39] 2025-11-26 12:50:15,917 | INFO     | sum of square deviations: 152882931617.5
[2025-11-26 13:50:39] 2025-11-26 12:50:15,927 | INFO     | sum of deviations: 247338689850.49948
[2025-11-26 13:50:39] 2025-11-26 12:50:15,928 | INFO     | mean x: 1764137323.5
[2025-11-26 13:50:39] 2025-11-26 12:50:15,928 | INFO     | mean y: 2201735.806329114
[2025-11-26 13:50:39] 2025-11-26 12:50:15,928 | INFO     | intersect: -2851873664.857367
[2025-11-26 13:50:39] 2025-11-26 12:50:15,929 | INFO     | chi2: 1.352502399950485
[2025-11-26 13:50:39] 2025-11-26 12:50:15,929 | INFO     | current chi2=1.352502399950485 (change=49.84102439237061 %)
[2025-11-26 13:50:39] 2025-11-26 12:50:15,929 | INFO     | sum of square deviations: 149998421720.0
[2025-11-26 13:50:39] 2025-11-26 12:50:15,939 | INFO     | sum of deviations: 244897477872.00003
[2025-11-26 13:50:39] 2025-11-26 12:50:15,940 | INFO     | mean x: 1764137476.0
[2025-11-26 13:50:39] 2025-11-26 12:50:15,940 | INFO     | mean y: 2201864.4968152866
[2025-11-26 13:50:39] 2025-11-26 12:50:15,940 | INFO     | intersect: -2878047231.0459747
[2025-11-26 13:50:39] 2025-11-26 12:50:15,940 | INFO     | chi2: 1.3515553796943367
[2025-11-26 13:50:39] 2025-11-26 12:50:15,941 | INFO     | current chi2=1.3515553796943367 (change=0.07001985772321112 %)
[2025-11-26 13:50:39] 2025-11-26 12:50:15,941 | INFO     | left removable region: 20
[2025-11-26 13:50:39] 2025-11-26 12:50:15,941 | INFO     | sum of square deviations: 138279485715.0
[2025-11-26 13:50:39] 2025-11-26 12:50:15,950 | INFO     | sum of deviations: 323036537248.49994
[2025-11-26 13:50:39] 2025-11-26 12:50:15,950 | INFO     | mean x: 1764137445.5
[2025-11-26 13:50:39] 2025-11-26 12:50:15,951 | INFO     | mean y: 2206254.3102094242
[2025-11-26 13:50:39] 2025-11-26 12:50:15,951 | INFO     | intersect: -4119018587.3794928
[2025-11-26 13:50:39] 2025-11-26 12:50:15,951 | INFO     | chi2: 0.11248030438886739
[2025-11-26 13:50:39] 2025-11-26 12:50:15,951 | INFO     | current memory leak: 2.34 B/s (using 764 data points, chi2=0.11)
[2025-11-26 13:50:39] 2025-11-26 12:50:15,952 | INFO     | could have reported an average CPU frequency of 4001 MHz (30 samples)
[2025-11-26 13:50:39] 2025-11-26 12:50:15,952 | INFO     | ..............................
[2025-11-26 13:50:39] 2025-11-26 12:50:15,952 | INFO     | . Timing measurements:
[2025-11-26 13:50:39] 2025-11-26 12:50:15,952 | INFO     | . get job = 0 s
[2025-11-26 13:50:39] 2025-11-26 12:50:15,952 | INFO     | . initial setup = 1 s
[2025-11-26 13:50:39] 2025-11-26 12:50:15,953 | INFO     | . payload setup = 3 s
[2025-11-26 13:50:39] 2025-11-26 12:50:15,953 | INFO     | . stage-in = 0 s
[2025-11-26 13:50:39] 2025-11-26 12:50:15,953 | INFO     | . payload execution = 48454 s
[2025-11-26 13:50:39] 2025-11-26 12:50:15,953 | INFO     | . stage-out = 1 s
[2025-11-26 13:50:39] 2025-11-26 12:50:15,953 | INFO     | . log creation = 0 s
[2025-11-26 13:50:39] 2025-11-26 12:50:15,953 | INFO     | ..............................
[2025-11-26 13:50:39] 2025-11-26 12:50:15,989 | INFO     | time since job start (48480s) is within the limit (172800.0s)
[2025-11-26 13:50:39] 2025-11-26 12:50:16,000 | INFO     | size of work directory /var/lib/boinc/slots/1/PanDA_Pilot-6892549568: 4914777 B (within 2537553920 B limit)
[2025-11-26 13:50:39] 2025-11-26 12:50:16,000 | INFO     | pfn file=/var/lib/boinc/slots/1/PanDA_Pilot-6892549568/HITS.47493029._003581.pool.root.1 does not exist (skip from workdir size calculation)
[2025-11-26 13:50:39] 2025-11-26 12:50:16,000 | INFO     | total size of present files: 0 B (workdir size: 4914777 B)
[2025-11-26 13:50:39] 2025-11-26 12:50:16,000 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/1/PanDA_Pilot-6892549568/HITS.47493029._003581.pool.root.1 since it does not exist
[2025-11-26 13:50:39] 2025-11-26 12:50:16,048 | INFO     | number of running child processes to parent process 2086342: 1
[2025-11-26 13:50:39] 2025-11-26 12:50:16,048 | INFO     | maximum number of monitored processes: 8
[2025-11-26 13:50:39] 2025-11-26 12:50:16,048 | INFO     | aborting job monitoring since job object (job id=6892549568) has expired
[2025-11-26 13:50:39] 2025-11-26 12:50:16,147 | INFO     | 
[2025-11-26 13:50:39] 2025-11-26 12:50:16,148 | INFO     | job summary report
[2025-11-26 13:50:39] 2025-11-26 12:50:16,148 | INFO     | --------------------------------------------------
[2025-11-26 13:50:39] 2025-11-26 12:50:16,148 | INFO     | PanDA job id: 6892549568
[2025-11-26 13:50:39] 2025-11-26 12:50:16,148 | INFO     | task id: 47493029
[2025-11-26 13:50:39] 2025-11-26 12:50:16,148 | INFO     | errors: (none)
[2025-11-26 13:50:39] 2025-11-26 12:50:16,148 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 13:50:39] 2025-11-26 12:50:16,148 | INFO     | pilot state: finished 
[2025-11-26 13:50:39] 2025-11-26 12:50:16,148 | INFO     | transexitcode: 0
[2025-11-26 13:50:39] 2025-11-26 12:50:16,148 | INFO     | exeerrorcode: 0
[2025-11-26 13:50:39] 2025-11-26 12:50:16,148 | INFO     | exeerrordiag: 
[2025-11-26 13:50:39] 2025-11-26 12:50:16,148 | INFO     | exitcode: 0
[2025-11-26 13:50:39] 2025-11-26 12:50:16,148 | INFO     | exitmsg: OK
[2025-11-26 13:50:39] 2025-11-26 12:50:16,148 | INFO     | cpuconsumptiontime: 144935 s
[2025-11-26 13:50:39] 2025-11-26 12:50:16,148 | INFO     | nevents: 1000
[2025-11-26 13:50:39] 2025-11-26 12:50:16,148 | INFO     | neventsw: 0
[2025-11-26 13:50:39] 2025-11-26 12:50:16,148 | INFO     | pid: 2086342
[2025-11-26 13:50:39] 2025-11-26 12:50:16,149 | INFO     | pgrp: 2086342
[2025-11-26 13:50:39] 2025-11-26 12:50:16,149 | INFO     | corecount: 3
[2025-11-26 13:50:39] 2025-11-26 12:50:16,149 | INFO     | event service: False
[2025-11-26 13:50:39] 2025-11-26 12:50:16,149 | INFO     | sizes: {0: 2283470, 1: 2284326, 3: 2284588, 11: 2284616, 48461: 2332850, 48462: 2332849, 48463: 2342027, 48464: 2342083, 48468: 2342329}
[2025-11-26 13:50:39] 2025-11-26 12:50:16,149 | INFO     | --------------------------------------------------
[2025-11-26 13:50:39] 2025-11-26 12:50:16,149 | INFO     | 
[2025-11-26 13:50:39] 2025-11-26 12:50:16,149 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-11-26 13:50:39] 2025-11-26 12:50:16,158 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 13:50:39] 2025-11-26 12:50:16,158 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 13:50:39] 2025-11-26 12:50:16,158 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 13:50:39] 2025-11-26 12:50:16,158 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 13:50:39] 2025-11-26 12:50:16,158 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 13:50:39] 2025-11-26 12:50:16,158 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 13:50:39] 2025-11-26 12:50:16,158 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 13:50:39] 2025-11-26 12:50:16,158 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 13:50:39] 2025-11-26 12:50:16,158 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 13:50:39] 2025-11-26 12:50:16,158 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 13:50:39] 2025-11-26 12:50:16,159 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 13:50:39] 2025-11-26 12:50:16,159 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 13:50:39] 2025-11-26 12:50:16,159 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 13:50:39] 2025-11-26 12:50:16,159 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 13:50:39] 2025-11-26 12:50:16,159 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 13:50:39] 2025-11-26 12:50:16,159 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 13:50:39] 2025-11-26 12:50:16,159 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 13:50:39] 2025-11-26 12:50:16,159 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 13:50:39] 2025-11-26 12:50:16,159 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 13:50:39] 2025-11-26 12:50:16,159 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 13:50:39] 2025-11-26 12:50:16,159 | INFO     | job 6892549568 has completed (purged errors)
[2025-11-26 13:50:39] 2025-11-26 12:50:16,159 | INFO     | overall cleanup function is called
[2025-11-26 13:50:39] 2025-11-26 12:50:17,165 | INFO     | --- collectZombieJob: --- 10, [2086342]
[2025-11-26 13:50:39] 2025-11-26 12:50:17,166 | INFO     | zombie collector waiting for pid 2086342
[2025-11-26 13:50:39] 2025-11-26 12:50:17,166 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 13:50:39] 2025-11-26 12:50:17,166 | INFO     | collected zombie processes
[2025-11-26 13:50:39] 2025-11-26 12:50:17,166 | INFO     | will attempt to kill all subprocesses of pid=2086342
[2025-11-26 13:50:39] 2025-11-26 12:50:17,202 | INFO     | process IDs to be killed: [2086342] (in reverse order)
[2025-11-26 13:50:39] 2025-11-26 12:50:17,222 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 13:50:39] 2025-11-26 12:50:17,222 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 13:50:39] 2025-11-26 12:50:17,224 | INFO     | did not find any defunct processes belonging to 2086342
[2025-11-26 13:50:39] 2025-11-26 12:50:17,225 | INFO     | did not find any defunct processes belonging to 2086342
[2025-11-26 13:50:39] 2025-11-26 12:50:17,226 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 13:50:39] 2025-11-26 12:50:17,226 | INFO     | ready for new job
[2025-11-26 13:50:39] 2025-11-26 12:50:17,226 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 13:50:39] 2025-11-26 12:50:17,228 | INFO     | ***************************************
[2025-11-26 13:50:39] 2025-11-26 12:50:17,229 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 13:50:39] 2025-11-26 12:50:17,229 | INFO     | ***************************************
[2025-11-26 13:50:39] 2025-11-26 12:50:17,229 | INFO     | 
[2025-11-26 13:50:39] 2025-11-26 12:50:17,229 | INFO     | architecture information:
[2025-11-26 13:50:39] 2025-11-26 12:50:17,229 | INFO     | executing command: cat /etc/os-release
[2025-11-26 13:50:39] 2025-11-26 12:50:17,237 | INFO     | cat /etc/os-release:
[2025-11-26 13:50:39] NAME="CentOS Linux"
[2025-11-26 13:50:39] VERSION="7 (Core)"
[2025-11-26 13:50:39] ID="centos"
[2025-11-26 13:50:39] ID_LIKE="rhel fedora"
[2025-11-26 13:50:39] VERSION_ID="7"
[2025-11-26 13:50:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 13:50:39] ANSI_COLOR="0;31"
[2025-11-26 13:50:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 13:50:39] HOME_URL="https://www.centos.org/"
[2025-11-26 13:50:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 13:50:39] 
[2025-11-26 13:50:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 13:50:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 13:50:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 13:50:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 13:50:39] 
[2025-11-26 13:50:39] 2025-11-26 12:50:17,237 | INFO     | ***************************************
[2025-11-26 13:50:39] 2025-11-26 12:50:17,738 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-11-26 13:50:39] 2025-11-26 12:50:17,746 | INFO     | sufficient remaining disk space (190856560640 B)
[2025-11-26 13:50:39] 2025-11-26 12:50:17,746 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 13:50:39] 2025-11-26 12:50:17,746 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 13:50:39] 2025-11-26 12:50:17,746 | INFO     | update_server=False
[2025-11-26 13:50:39] 2025-11-26 12:50:17,747 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 13:50:39] 2025-11-26 12:50:17,747 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 13:50:39] 2025-11-26 12:50:17,747 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-26 13:50:39] 2025-11-26 12:50:17,747 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 13:50:39] 2025-11-26 12:50:17,747 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 13:50:39] 2025-11-26 12:50:17,747 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 13:50:39] 2025-11-26 12:50:17,747 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 13:50:39] 2025-11-26 12:50:17,747 | INFO     | aborting loop
[2025-11-26 13:50:39] 2025-11-26 12:50:18,204 | INFO     | all data control threads have been joined
[2025-11-26 13:50:39] 2025-11-26 12:50:18,426 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 13:50:39] 2025-11-26 12:50:18,512 | INFO     | all payload control threads have been joined
[2025-11-26 13:50:39] 2025-11-26 12:50:18,752 | INFO     | [job] retrieve thread has finished
[2025-11-26 13:50:39] 2025-11-26 12:50:18,752 | INFO     | [job] queue monitor thread has finished
[2025-11-26 13:50:39] 2025-11-26 12:50:18,753 | INFO     | [job] job monitor thread has finished
[2025-11-26 13:50:39] 2025-11-26 12:50:18,874 | INFO     | [payload] validate_post thread has finished
[2025-11-26 13:50:39] 2025-11-26 12:50:18,935 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 13:50:39] 2025-11-26 12:50:18,946 | INFO     | all job control threads have been joined
[2025-11-26 13:50:39] 2025-11-26 12:50:19,017 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 13:50:39] 2025-11-26 12:50:19,209 | INFO     | [data] control thread has finished
[2025-11-26 13:50:39] 2025-11-26 12:50:19,233 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 13:50:39] 2025-11-26 12:50:19,357 | INFO     | [data] copytool_in thread has finished
[2025-11-26 13:50:39] 2025-11-26 12:50:19,517 | INFO     | [payload] control thread has finished
[2025-11-26 13:50:39] 2025-11-26 12:50:19,875 | INFO     | [job] validate thread has finished
[2025-11-26 13:50:39] 2025-11-26 12:50:19,891 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 13:50:39] 2025-11-26 12:50:19,939 | INFO     | [payload] failed_post thread has finished
[2025-11-26 13:50:39] 2025-11-26 12:50:19,949 | INFO     | [job] control thread has finished
[2025-11-26 13:50:39] 2025-11-26 12:50:20,939 | INFO     | [data] copytool_out thread has finished
[2025-11-26 13:50:39] 2025-11-26 12:50:22,429 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 13:50:39] 2025-11-26 12:50:28,429 | INFO     | job.realtimelogging is not enabled
[2025-11-26 13:50:39] 2025-11-26 12:50:29,434 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 13:50:39] 2025-11-26 12:50:33,226 | INFO     | [monitor] cgroup control has ended
[2025-11-26 13:50:39] 2025-11-26 12:50:33,982 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140681543919424)>', '<ExcThread(monitor, started 140680898795264)>']
[2025-11-26 13:50:39] 2025-11-26 12:50:34,824 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 13:50:39] 2025-11-26 12:50:34,824 | INFO     | [monitor] control thread has ended
[2025-11-26 13:50:39] 2025-11-26 12:50:39,005 | INFO     | all workflow threads have been joined
[2025-11-26 13:50:39] 2025-11-26 12:50:39,006 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 13:50:39] 2025-11-26 12:50:39,006 | INFO     | traces error code: 0
[2025-11-26 13:50:39] 2025-11-26 12:50:39,006 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 13:50:39] 2025-11-26 12:50:39,060 [wrapper] ==== pilot stdout END ====
[2025-11-26 13:50:39] 2025-11-26 12:50:39,061 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 13:50:39] 2025-11-26 12:50:39,062 [wrapper] pilotpid: 2079921
[2025-11-26 13:50:39] 2025-11-26 12:50:39,063 [wrapper] Pilot exit status: 0
[2025-11-26 13:50:39] 2025-11-26 12:50:39,068 [wrapper] pandaids: 6892549568
[2025-11-26 13:50:39] 2025-11-26 12:50:39,080 [wrapper] cleanup supervisor_pilot 2241259 2079922
[2025-11-26 13:50:39] 2025-11-26 12:50:39,082 [wrapper] Test setup, not cleaning
[2025-11-26 13:50:39] 2025-11-26 12:50:39,083 [wrapper] apfmon messages muted
[2025-11-26 13:50:39] 2025-11-26 12:50:39,084 [wrapper] ==== wrapper stdout END ====
[2025-11-26 13:50:39] 2025-11-26 12:50:39,085 [wrapper] ==== wrapper stderr END ====
[2025-11-26 13:50:39]  *** Error codes and diagnostics ***
[2025-11-26 13:50:39]     "exeErrorCode": 0,
[2025-11-26 13:50:39]     "exeErrorDiag": "",
[2025-11-26 13:50:39]     "pilotErrorCode": 0,
[2025-11-26 13:50:39]     "pilotErrorDiag": "",
[2025-11-26 13:50:39]  *** Listing of results directory ***
[2025-11-26 13:50:39] insgesamt 1328976
[2025-11-26 13:50:39] -rw-r--r-- 1 boinc boinc    576529 19. Nov 09:32 pilot3.tar.gz
[2025-11-26 13:50:39] -rwx------ 1 boinc boinc     36292 19. Nov 09:55 runpilot2-wrapper.sh
[2025-11-26 13:50:39] -rw-r--r-- 1 boinc boinc      5112 19. Nov 09:55 queuedata.json
[2025-11-26 13:50:39] -rw-r--r-- 1 boinc boinc       100 26. Nov 00:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 13:50:39] -rwxr-xr-x 1 boinc boinc      7986 26. Nov 00:22 run_atlas
[2025-11-26 13:50:39] -rw-r--r-- 1 boinc boinc       105 26. Nov 00:22 job.xml
[2025-11-26 13:50:39] -rw-r--r-- 1 boinc boinc      9829 26. Nov 00:22 init_data.xml
[2025-11-26 13:50:39] -rw-r--r-- 2 boinc boinc 412008552 26. Nov 00:22 EVNT.47493027._000363.pool.root.1
[2025-11-26 13:50:39] drwxrwx--x 2 boinc boinc      4096 26. Nov 00:22 shared
[2025-11-26 13:50:39] -rw-r--r-- 2 boinc boinc    590098 26. Nov 00:22 input.tar.gz
[2025-11-26 13:50:39] -rw-r--r-- 2 boinc boinc     15120 26. Nov 00:22 start_atlas.sh
[2025-11-26 13:50:39] -rw-r--r-- 1 boinc boinc         0 26. Nov 00:22 boinc_lockfile
[2025-11-26 13:50:39] -rw-r--r-- 1 boinc boinc      2770 26. Nov 00:22 pandaJob.out
[2025-11-26 13:50:39] -rw------- 1 boinc boinc    991877 26. Nov 00:22 agis_schedconf.cvmfs.json
[2025-11-26 13:50:39] drwx------ 5 boinc boinc      4096 26. Nov 00:22 pilot3
[2025-11-26 13:50:39] -rw-r--r-- 1 boinc boinc       532 26. Nov 13:47 boinc_task_state.xml
[2025-11-26 13:50:39] -rw------- 1 boinc boinc        95 26. Nov 13:49 pilot_heartbeat.json
[2025-11-26 13:50:39] -rw------- 1 boinc boinc 928288032 26. Nov 13:49 HITS.47493029._003581.pool.root.1
[2025-11-26 13:50:39] -rw------- 1 boinc boinc      1024 26. Nov 13:50 memory_monitor_summary.json
[2025-11-26 13:50:39] -rw------- 1 boinc boinc   1516240 26. Nov 13:50 agis_ddmendpoints.agis.ALL.json
[2025-11-26 13:50:39] -rw------- 1 boinc boinc   1407879 26. Nov 13:50 log.47493029._003581.job.log.tgz.1
[2025-11-26 13:50:39] -rw------- 1 boinc boinc      8561 26. Nov 13:50 heartbeat.json
[2025-11-26 13:50:39] -rw-r--r-- 1 boinc boinc      8192 26. Nov 13:50 boinc_mmap_file
[2025-11-26 13:50:39] -rw-r--r-- 1 boinc boinc        29 26. Nov 13:50 wrapper_checkpoint.txt
[2025-11-26 13:50:39] -rw------- 1 boinc boinc      4625 26. Nov 13:50 pilotlog.txt
[2025-11-26 13:50:39] -rw------- 1 boinc boinc   6915036 26. Nov 13:50 log.47493029._003581.job.log.1
[2025-11-26 13:50:39] -rw------- 1 boinc boinc       353 26. Nov 13:50 output.list
[2025-11-26 13:50:39] -rw-r--r-- 1 boinc boinc       620 26. Nov 13:50 runtime_log
[2025-11-26 13:50:39] -rw------- 1 boinc boinc   8345600 26. Nov 13:50 result.tar.gz
[2025-11-26 13:50:39] -rw-r--r-- 1 boinc boinc      8661 26. Nov 13:50 runtime_log.err
[2025-11-26 13:50:39] -rw------- 1 boinc boinc       651 26. Nov 13:50 4cxMDmM9sf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm99FKDmQhdqpm.diag
[2025-11-26 13:50:39] -rw-r--r-- 1 boinc boinc     21127 26. Nov 13:50 stderr.txt
[2025-11-26 13:50:39] HITS file was successfully produced:
[2025-11-26 13:50:39] -rw------- 1 boinc boinc 928288032 26. Nov 13:49 shared/HITS.pool.root.1
[2025-11-26 13:50:39]  *** Contents of shared directory: ***
[2025-11-26 13:50:39] insgesamt 1317644
[2025-11-26 13:50:39] -rw-r--r-- 2 boinc boinc 412008552 26. Nov 00:22 ATLAS.root_0
[2025-11-26 13:50:39] -rw-r--r-- 2 boinc boinc    590098 26. Nov 00:22 input.tar.gz
[2025-11-26 13:50:39] -rw-r--r-- 2 boinc boinc     15120 26. Nov 00:22 start_atlas.sh
[2025-11-26 13:50:39] -rw------- 1 boinc boinc 928288032 26. Nov 13:49 HITS.pool.root.1
[2025-11-26 13:50:39] -rw------- 1 boinc boinc   8345600 26. Nov 13:50 result.tar.gz
13:50:40 (2076219): run_atlas exited; CPU time 145173.694005
13:50:40 (2076219): called boinc_finish(0)

</stderr_txt>
]]>

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