Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:47:15 (2091): wrapper (7.7.26015): starting
10:47:15 (2091): wrapper: running run_atlas (--nthreads 8)
[2025-11-19 10:47:15] Arguments: --nthreads 8
[2025-11-19 10:47:15] Threads: 8
[2025-11-19 10:47:15] Checking for CVMFS
[2025-11-19 10:47:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 10:47:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 10:47:15] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 10:47:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 10:47:16] 2.11.2.0 2831 33172 78468 153049 1 82 20049944 20275200 1 130560 0 2625672 99.264 2422185 26738 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-19 10:47:16] CVMFS is ok
[2025-11-19 10:47:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-19 10:47:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-19 10:47:16] Further information can be found at the LHC@home message board.
[2025-11-19 10:47:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 10:47:16] Checking for apptainer binary...
[2025-11-19 10:47:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 10:47:16] Running /usr/bin/apptainer --version
[2025-11-19 10:47:16] apptainer version 1.3.2-1.el7
[2025-11-19 10:47:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 10:47:17] c-204-31.aglt2.org
[2025-11-19 10:47:17] apptainer works
[2025-11-19 10:47:17] Set ATHENA_PROC_NUMBER=8
[2025-11-19 10:47:17] Set ATHENA_CORE_NUMBER=8
[2025-11-19 10:47:17] Starting ATLAS job with PandaID=6892543911
[2025-11-19 10:47:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-19 23:30:58]  *** The last 200 lines of the pilot log: ***
[2025-11-19 23:30:58] 2025-11-20 04:30:19,247 | INFO     | extracted standard info from prmon json
[2025-11-19 23:30:58] 2025-11-20 04:30:19,247 | INFO     | extracted standard memory fields from prmon json
[2025-11-19 23:30:58] 2025-11-20 04:30:19,248 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-19 23:30:58] 2025-11-20 04:30:19,261 | INFO     | fitting pss+swap vs Time
[2025-11-19 23:30:58] 2025-11-20 04:30:19,262 | INFO     | sum of square deviations: 130816211871.19391
[2025-11-19 23:30:58] 2025-11-20 04:30:19,274 | INFO     | sum of deviations: 722595411287.2351
[2025-11-19 23:30:58] 2025-11-20 04:30:19,274 | INFO     | mean x: 1763590133.1306667
[2025-11-19 23:30:58] 2025-11-20 04:30:19,274 | INFO     | mean y: 3101689.1506666667
[2025-11-19 23:30:58] 2025-11-20 04:30:19,275 | INFO     | intersect: -9738520693.604492
[2025-11-19 23:30:58] 2025-11-20 04:30:19,275 | INFO     | chi2: 6.97310761010087
[2025-11-19 23:30:58] 2025-11-20 04:30:19,276 | INFO     | sum of square deviations: 128217432986.69269
[2025-11-19 23:30:58] 2025-11-20 04:30:19,290 | INFO     | sum of deviations: 1022215501910.422
[2025-11-19 23:30:58] 2025-11-20 04:30:19,290 | INFO     | mean x: 1763589980.6348994
[2025-11-19 23:30:58] 2025-11-20 04:30:19,290 | INFO     | mean y: 3119273.553020134
[2025-11-19 23:30:58] 2025-11-20 04:30:19,290 | INFO     | intersect: -14057129596.083912
[2025-11-19 23:30:58] 2025-11-20 04:30:19,291 | INFO     | chi2: 3.2018079905468664
[2025-11-19 23:30:58] 2025-11-20 04:30:19,291 | INFO     | current chi2=3.2018079905468664 (change=54.08348516077825 %)
[2025-11-19 23:30:58] 2025-11-20 04:30:19,292 | INFO     | sum of square deviations: 125653305914.66336
[2025-11-19 23:30:58] 2025-11-20 04:30:19,304 | INFO     | sum of deviations: 1149914748291.797
[2025-11-19 23:30:58] 2025-11-20 04:30:19,304 | INFO     | mean x: 1763589828.1391892
[2025-11-19 23:30:58] 2025-11-20 04:30:19,304 | INFO     | mean y: 3126863.6621621624
[2025-11-19 23:30:58] 2025-11-20 04:30:19,304 | INFO     | intersect: -16136344665.180363
[2025-11-19 23:30:58] 2025-11-20 04:30:19,305 | INFO     | chi2: 2.3981082555198863
[2025-11-19 23:30:58] 2025-11-20 04:30:19,305 | INFO     | current chi2=2.3981082555198863 (change=25.10143448326234 %)
[2025-11-19 23:30:58] 2025-11-20 04:30:19,306 | INFO     | sum of square deviations: 123123508179.1752
[2025-11-19 23:30:58] 2025-11-20 04:30:19,319 | INFO     | sum of deviations: 1158332128106.0034
[2025-11-19 23:30:58] 2025-11-20 04:30:19,319 | INFO     | mean x: 1763589675.6408162
[2025-11-19 23:30:58] 2025-11-20 04:30:19,319 | INFO     | mean y: 3127364.8598639457
[2025-11-19 23:30:58] 2025-11-20 04:30:19,319 | INFO     | intersect: -16588526108.155136
[2025-11-19 23:30:58] 2025-11-20 04:30:19,320 | INFO     | chi2: 2.3333731634594543
[2025-11-19 23:30:58] 2025-11-20 04:30:19,320 | INFO     | current chi2=2.3333731634594543 (change=2.6994232604565216 %)
[2025-11-19 23:30:58] 2025-11-20 04:30:19,321 | INFO     | right removable region: 734
[2025-11-19 23:30:58] 2025-11-20 04:30:19,321 | INFO     | sum of square deviations: 128217144456.69272
[2025-11-19 23:30:58] 2025-11-20 04:30:19,333 | INFO     | sum of deviations: 503999753980.14417
[2025-11-19 23:30:58] 2025-11-20 04:30:19,333 | INFO     | mean x: 1763590285.6348994
[2025-11-19 23:30:58] 2025-11-20 04:30:19,333 | INFO     | mean y: 3114495.0483221477
[2025-11-19 23:30:58] 2025-11-20 04:30:19,333 | INFO     | intersect: -6929258502.713952
[2025-11-19 23:30:58] 2025-11-20 04:30:19,334 | INFO     | chi2: 4.797630178661377
[2025-11-19 23:30:58] 2025-11-20 04:30:19,334 | INFO     | current chi2=4.797630178661377 (change=31.198104963821482 %)
[2025-11-19 23:30:58] 2025-11-20 04:30:19,335 | INFO     | sum of square deviations: 125652865556.48637
[2025-11-19 23:30:58] 2025-11-20 04:30:19,348 | INFO     | sum of deviations: 463406064743.91925
[2025-11-19 23:30:58] 2025-11-20 04:30:19,349 | INFO     | mean x: 1763590438.1351352
[2025-11-19 23:30:58] 2025-11-20 04:30:19,349 | INFO     | mean y: 3116907.6108108107
[2025-11-19 23:30:58] 2025-11-20 04:30:19,349 | INFO     | intersect: -6500980719.902621
[2025-11-19 23:30:58] 2025-11-20 04:30:19,350 | INFO     | chi2: 4.765786466003441
[2025-11-19 23:30:58] 2025-11-20 04:30:19,350 | INFO     | current chi2=4.765786466003441 (change=0.6637383764919842 %)
[2025-11-19 23:30:58] 2025-11-20 04:30:19,350 | INFO     | left removable region: 20
[2025-11-19 23:30:58] 2025-11-20 04:30:19,351 | INFO     | sum of square deviations: 112868462398.2633
[2025-11-19 23:30:58] 2025-11-20 04:30:19,361 | INFO     | sum of deviations: 850465762322.4763
[2025-11-19 23:30:58] 2025-11-20 04:30:19,362 | INFO     | mean x: 1763590255.1484594
[2025-11-19 23:30:58] 2025-11-20 04:30:19,362 | INFO     | mean y: 3145954.023809524
[2025-11-19 23:30:58] 2025-11-20 04:30:19,362 | INFO     | intersect: -13285536277.483257
[2025-11-19 23:30:58] 2025-11-20 04:30:19,363 | INFO     | chi2: 0.09185534504564916
[2025-11-19 23:30:58] 2025-11-20 04:30:19,363 | INFO     | current memory leak: 7.54 B/s (using 714 data points, chi2=0.09)
[2025-11-19 23:30:58] 2025-11-20 04:30:19,363 | INFO     | could have reported an average CPU frequency of 2152 MHz (29 samples)
[2025-11-19 23:30:58] 2025-11-20 04:30:19,364 | INFO     | ..............................
[2025-11-19 23:30:58] 2025-11-20 04:30:19,364 | INFO     | . Timing measurements:
[2025-11-19 23:30:58] 2025-11-20 04:30:19,364 | INFO     | . get job = 0 s
[2025-11-19 23:30:58] 2025-11-20 04:30:19,364 | INFO     | . initial setup = 3 s
[2025-11-19 23:30:58] 2025-11-20 04:30:19,364 | INFO     | . payload setup = 9 s
[2025-11-19 23:30:58] 2025-11-20 04:30:19,364 | INFO     | . stage-in = 0 s
[2025-11-19 23:30:58] 2025-11-20 04:30:19,364 | INFO     | . payload execution = 45716 s
[2025-11-19 23:30:58] 2025-11-20 04:30:19,364 | INFO     | . stage-out = 7 s
[2025-11-19 23:30:58] 2025-11-20 04:30:19,365 | INFO     | . log creation = 0 s
[2025-11-19 23:30:58] 2025-11-20 04:30:19,365 | INFO     | ..............................
[2025-11-19 23:30:58] 2025-11-20 04:30:19,473 | INFO     | 
[2025-11-19 23:30:58] 2025-11-20 04:30:19,473 | INFO     | job summary report
[2025-11-19 23:30:58] 2025-11-20 04:30:19,473 | INFO     | --------------------------------------------------
[2025-11-19 23:30:58] 2025-11-20 04:30:19,473 | INFO     | PanDA job id: 6892543911
[2025-11-19 23:30:58] 2025-11-20 04:30:19,473 | INFO     | task id: 47493029
[2025-11-19 23:30:58] 2025-11-20 04:30:19,473 | INFO     | errors: (none)
[2025-11-19 23:30:58] 2025-11-20 04:30:19,473 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-19 23:30:58] 2025-11-20 04:30:19,474 | INFO     | pilot state: finished 
[2025-11-19 23:30:58] 2025-11-20 04:30:19,474 | INFO     | transexitcode: 0
[2025-11-19 23:30:58] 2025-11-20 04:30:19,474 | INFO     | exeerrorcode: 0
[2025-11-19 23:30:58] 2025-11-20 04:30:19,474 | INFO     | exeerrordiag: 
[2025-11-19 23:30:58] 2025-11-20 04:30:19,474 | INFO     | exitcode: 0
[2025-11-19 23:30:58] 2025-11-20 04:30:19,474 | INFO     | exitmsg: OK
[2025-11-19 23:30:58] 2025-11-20 04:30:19,474 | INFO     | cpuconsumptiontime: 352664 s
[2025-11-19 23:30:58] 2025-11-20 04:30:19,474 | INFO     | nevents: 1000
[2025-11-19 23:30:58] 2025-11-20 04:30:19,475 | INFO     | neventsw: 0
[2025-11-19 23:30:58] 2025-11-20 04:30:19,475 | INFO     | pid: 12412
[2025-11-19 23:30:58] 2025-11-20 04:30:19,475 | INFO     | pgrp: 12412
[2025-11-19 23:30:58] 2025-11-20 04:30:19,475 | INFO     | corecount: 8
[2025-11-19 23:30:58] 2025-11-20 04:30:19,475 | INFO     | event service: False
[2025-11-19 23:30:58] 2025-11-20 04:30:19,475 | INFO     | sizes: {0: 2297023, 1: 2297222, 7: 2297484, 11: 2297512, 45729: 2343648, 45738: 2352916, 45739: 2353100, 45747: 2353124}
[2025-11-19 23:30:58] 2025-11-20 04:30:19,475 | INFO     | --------------------------------------------------
[2025-11-19 23:30:58] 2025-11-20 04:30:19,475 | INFO     | 
[2025-11-19 23:30:58] 2025-11-20 04:30:19,476 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-19 23:30:58] 2025-11-20 04:30:19,506 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-19 23:30:58] 2025-11-20 04:30:19,506 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-19 23:30:58] 2025-11-20 04:30:19,506 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-19 23:30:58] 2025-11-20 04:30:19,506 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-19 23:30:58] 2025-11-20 04:30:19,507 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-19 23:30:58] 2025-11-20 04:30:19,507 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-19 23:30:58] 2025-11-20 04:30:19,507 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-19 23:30:58] 2025-11-20 04:30:19,507 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-19 23:30:58] 2025-11-20 04:30:19,507 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-19 23:30:58] 2025-11-20 04:30:19,507 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-19 23:30:58] 2025-11-20 04:30:19,508 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-19 23:30:58] 2025-11-20 04:30:19,508 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-19 23:30:58] 2025-11-20 04:30:19,508 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-19 23:30:58] 2025-11-20 04:30:19,508 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-19 23:30:58] 2025-11-20 04:30:19,508 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-19 23:30:58] 2025-11-20 04:30:19,508 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-19 23:30:58] 2025-11-20 04:30:19,508 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-19 23:30:58] 2025-11-20 04:30:19,509 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-19 23:30:58] 2025-11-20 04:30:19,509 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-19 23:30:58] 2025-11-20 04:30:19,509 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-19 23:30:58] 2025-11-20 04:30:19,509 | INFO     | job 6892543911 has completed (purged errors)
[2025-11-19 23:30:58] 2025-11-20 04:30:19,510 | INFO     | overall cleanup function is called
[2025-11-19 23:30:58] 2025-11-20 04:30:20,526 | INFO     | --- collectZombieJob: --- 10, [12412]
[2025-11-19 23:30:58] 2025-11-20 04:30:20,526 | INFO     | zombie collector waiting for pid 12412
[2025-11-19 23:30:58] 2025-11-20 04:30:20,526 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-19 23:30:58] 2025-11-20 04:30:20,526 | INFO     | collected zombie processes
[2025-11-19 23:30:58] 2025-11-20 04:30:20,526 | INFO     | will attempt to kill all subprocesses of pid=12412
[2025-11-19 23:30:58] 2025-11-20 04:30:20,623 | INFO     | process IDs to be killed: [12412] (in reverse order)
[2025-11-19 23:30:58] 2025-11-20 04:30:20,686 | WARNING  | found no corresponding commands to process id(s)
[2025-11-19 23:30:58] 2025-11-20 04:30:20,686 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-19 23:30:58] 2025-11-20 04:30:20,691 | INFO     | did not find any defunct processes belonging to 12412
[2025-11-19 23:30:58] 2025-11-20 04:30:20,694 | INFO     | did not find any defunct processes belonging to 12412
[2025-11-19 23:30:58] 2025-11-20 04:30:20,697 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-19 23:30:58] 2025-11-20 04:30:20,697 | INFO     | ready for new job
[2025-11-19 23:30:58] 2025-11-20 04:30:20,698 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-19 23:30:58] 2025-11-20 04:30:20,702 | INFO     | ***************************************
[2025-11-19 23:30:58] 2025-11-20 04:30:20,702 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-19 23:30:58] 2025-11-20 04:30:20,702 | INFO     | ***************************************
[2025-11-19 23:30:58] 2025-11-20 04:30:20,702 | INFO     | 
[2025-11-19 23:30:58] 2025-11-20 04:30:20,703 | INFO     | architecture information:
[2025-11-19 23:30:58] 2025-11-20 04:30:20,704 | INFO     | executing command: cat /etc/os-release
[2025-11-19 23:30:58] 2025-11-20 04:30:20,723 | INFO     | cat /etc/os-release:
[2025-11-19 23:30:58] NAME="CentOS Linux"
[2025-11-19 23:30:58] VERSION="7 (Core)"
[2025-11-19 23:30:58] ID="centos"
[2025-11-19 23:30:58] ID_LIKE="rhel fedora"
[2025-11-19 23:30:58] VERSION_ID="7"
[2025-11-19 23:30:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-19 23:30:58] ANSI_COLOR="0;31"
[2025-11-19 23:30:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-19 23:30:58] HOME_URL="https://www.centos.org/"
[2025-11-19 23:30:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-19 23:30:58] 
[2025-11-19 23:30:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-19 23:30:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-19 23:30:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-19 23:30:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-19 23:30:58] 
[2025-11-19 23:30:58] 2025-11-20 04:30:20,724 | INFO     | ***************************************
[2025-11-19 23:30:58] 2025-11-20 04:30:21,227 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-19 23:30:58] 2025-11-20 04:30:21,248 | INFO     | sufficient remaining disk space (17423138816 B)
[2025-11-19 23:30:58] 2025-11-20 04:30:21,249 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-19 23:30:58] 2025-11-20 04:30:21,249 | INFO     | current server update state: UPDATING_FINAL
[2025-11-19 23:30:58] 2025-11-20 04:30:21,249 | INFO     | update_server=False
[2025-11-19 23:30:58] 2025-11-20 04:30:21,249 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-19 23:30:58] 2025-11-20 04:30:21,250 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-19 23:30:58] 2025-11-20 04:30:21,250 | INFO     | aborting loop
[2025-11-19 23:30:58] 2025-11-20 04:30:21,250 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-19 23:30:58] 2025-11-20 04:30:21,516 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-19 23:30:58] 2025-11-20 04:30:21,712 | INFO     | all data control threads have been joined
[2025-11-19 23:30:58] 2025-11-20 04:30:21,968 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-19 23:30:58] 2025-11-20 04:30:22,250 | INFO     | [job] retrieve thread has finished
[2025-11-19 23:30:58] 2025-11-20 04:30:22,256 | INFO     | [job] job monitor thread has finished
[2025-11-19 23:30:58] 2025-11-20 04:30:22,257 | INFO     | [job] queue monitor thread has finished
[2025-11-19 23:30:58] 2025-11-20 04:30:22,426 | INFO     | [payload] execute_payloads thread has finished
[2025-11-19 23:30:58] 2025-11-20 04:30:22,514 | INFO     | [job] create_data_payload thread has finished
[2025-11-19 23:30:58] 2025-11-20 04:30:22,620 | INFO     | all payload control threads have been joined
[2025-11-19 23:30:58] 2025-11-20 04:30:22,718 | INFO     | [data] control thread has finished
[2025-11-19 23:30:58] 2025-11-20 04:30:22,795 | INFO     | all job control threads have been joined
[2025-11-19 23:30:58] 2025-11-20 04:30:23,251 | INFO     | [payload] failed_post thread has finished
[2025-11-19 23:30:58] 2025-11-20 04:30:23,327 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-19 23:30:58] 2025-11-20 04:30:23,521 | INFO     | [data] copytool_out thread has finished
[2025-11-19 23:30:58] 2025-11-20 04:30:23,626 | INFO     | [payload] control thread has finished
[2025-11-19 23:30:58] 2025-11-20 04:30:23,656 | INFO     | [payload] validate_pre thread has finished
[2025-11-19 23:30:58] 2025-11-20 04:30:23,687 | INFO     | [job] validate thread has finished
[2025-11-19 23:30:58] 2025-11-20 04:30:23,709 | INFO     | [data] copytool_in thread has finished
[2025-11-19 23:30:58] 2025-11-20 04:30:23,800 | INFO     | [job] control thread has finished
[2025-11-19 23:30:58] 2025-11-20 04:30:23,821 | INFO     | [payload] validate_post thread has finished
[2025-11-19 23:30:58] 2025-11-20 04:30:25,974 | INFO     | [data] queue_monitor thread has finished
[2025-11-19 23:30:58] 2025-11-20 04:30:50,950 | INFO     | PID=5971 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-19 23:30:58] 2025-11-20 04:30:50,951 | INFO     | found 0 job(s) in 20 queues
[2025-11-19 23:30:58] 2025-11-20 04:30:50,951 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-19 23:30:58] 2025-11-20 04:30:50,951 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-19 23:30:58] 2025-11-20 04:30:51,166 | INFO     | [monitor] cgroup control has ended
[2025-11-19 23:30:58] 2025-11-20 04:30:52,976 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140523062540096)>', '<ExcThread(monitor, started 140522756740864)>']
[2025-11-19 23:30:58] 2025-11-20 04:30:53,967 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-19 23:30:58] 2025-11-20 04:30:53,967 | INFO     | [monitor] control thread has ended
[2025-11-19 23:30:58] 2025-11-20 04:30:58,001 | INFO     | all workflow threads have been joined
[2025-11-19 23:30:58] 2025-11-20 04:30:58,001 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-19 23:30:58] 2025-11-20 04:30:58,002 | INFO     | traces error code: 0
[2025-11-19 23:30:58] 2025-11-20 04:30:58,002 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-19 23:30:58] 2025-11-20 04:30:58,135 [wrapper] ==== pilot stdout END ====
[2025-11-19 23:30:58] 2025-11-20 04:30:58,140 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-19 23:30:58] 2025-11-20 04:30:58,145 [wrapper] pilotpid: 5971
[2025-11-19 23:30:58] 2025-11-20 04:30:58,149 [wrapper] Pilot exit status: 0
[2025-11-19 23:30:58] 2025-11-20 04:30:58,166 [wrapper] pandaids: 6892543911
[2025-11-19 23:30:58] 2025-11-20 04:30:58,213 [wrapper] cleanup supervisor_pilot 28302 5972
[2025-11-19 23:30:58] 2025-11-20 04:30:58,219 [wrapper] Test setup, not cleaning
[2025-11-19 23:30:58] 2025-11-20 04:30:58,224 [wrapper] apfmon messages muted
[2025-11-19 23:30:58] 2025-11-20 04:30:58,228 [wrapper] ==== wrapper stdout END ====
[2025-11-19 23:30:58] 2025-11-20 04:30:58,232 [wrapper] ==== wrapper stderr END ====
[2025-11-19 23:30:58]  *** Error codes and diagnostics ***
[2025-11-19 23:30:58]     "exeErrorCode": 0,
[2025-11-19 23:30:58]     "exeErrorDiag": "",
[2025-11-19 23:30:58]     "pilotErrorCode": 0,
[2025-11-19 23:30:58]     "pilotErrorDiag": "",
[2025-11-19 23:30:58]  *** Listing of results directory ***
[2025-11-19 23:30:58] total 1329404
[2025-11-19 23:30:58] -rw-r--r-- 1 boincer umatlas    576529 Nov 19 02:46 pilot3.tar.gz
[2025-11-19 23:30:58] -rwx------ 1 boincer umatlas     36292 Nov 19 02:58 runpilot2-wrapper.sh
[2025-11-19 23:30:58] -rw-r--r-- 1 boincer umatlas      5112 Nov 19 02:58 queuedata.json
[2025-11-19 23:30:58] -rw-r--r-- 1 boincer umatlas       100 Nov 19 10:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-19 23:30:58] -rwxr-xr-x 1 boincer umatlas      7986 Nov 19 10:47 run_atlas
[2025-11-19 23:30:58] -rw-r--r-- 1 boincer umatlas       105 Nov 19 10:47 job.xml
[2025-11-19 23:30:58] -rw-r--r-- 2 boincer umatlas 411439610 Nov 19 10:47 EVNT.47493027._000265.pool.root.1
[2025-11-19 23:30:58] -rw-r--r-- 2 boincer umatlas     15120 Nov 19 10:47 start_atlas.sh
[2025-11-19 23:30:58] drwxrwx--x 2 boincer umatlas      4096 Nov 19 10:47 shared
[2025-11-19 23:30:58] -rw-r--r-- 2 boincer umatlas    590098 Nov 19 10:47 input.tar.gz
[2025-11-19 23:30:58] -rw-r--r-- 1 boincer umatlas         0 Nov 19 10:47 boinc_lockfile
[2025-11-19 23:30:58] -rw-r--r-- 1 boincer umatlas      2770 Nov 19 10:47 pandaJob.out
[2025-11-19 23:30:58] -rw------- 1 boincer umatlas    989434 Nov 19 10:47 agis_schedconf.cvmfs.json
[2025-11-19 23:30:58] drwx------ 5 boincer umatlas      4096 Nov 19 10:47 pilot3
[2025-11-19 23:30:58] -rw-r--r-- 1 boincer umatlas       533 Nov 19 23:17 boinc_task_state.xml
[2025-11-19 23:30:58] -rw------- 1 boincer umatlas 929385999 Nov 19 23:29 HITS.47493029._002601.pool.root.1
[2025-11-19 23:30:58] -rw------- 1 boincer umatlas      1063 Nov 19 23:29 memory_monitor_summary.json
[2025-11-19 23:30:58] -rw------- 1 boincer umatlas        95 Nov 19 23:30 pilot_heartbeat.json
[2025-11-19 23:30:58] -rw------- 1 boincer umatlas   1525063 Nov 19 23:30 agis_ddmendpoints.agis.ALL.json
[2025-11-19 23:30:58] -rw------- 1 boincer umatlas   1989138 Nov 19 23:30 log.47493029._002601.job.log.tgz.1
[2025-11-19 23:30:58] -rw------- 1 boincer umatlas      8655 Nov 19 23:30 heartbeat.json
[2025-11-19 23:30:58] -rw-r--r-- 1 boincer umatlas      5911 Nov 19 23:30 init_data.xml
[2025-11-19 23:30:58] -rw-r--r-- 1 boincer umatlas      8192 Nov 19 23:30 boinc_mmap_file
[2025-11-19 23:30:58] -rw-r--r-- 1 boincer umatlas        29 Nov 19 23:30 wrapper_checkpoint.txt
[2025-11-19 23:30:58] -rw------- 1 boincer umatlas      4745 Nov 19 23:30 pilotlog.txt
[2025-11-19 23:30:58] -rw------- 1 boincer umatlas   6290457 Nov 19 23:30 log.47493029._002601.job.log.1
[2025-11-19 23:30:58] -rw------- 1 boincer umatlas       353 Nov 19 23:30 output.list
[2025-11-19 23:30:58] -rw-r--r-- 1 boincer umatlas       620 Nov 19 23:30 runtime_log
[2025-11-19 23:30:58] -rw------- 1 boincer umatlas   8304640 Nov 19 23:30 result.tar.gz
[2025-11-19 23:30:58] -rw-r--r-- 1 boincer umatlas      8704 Nov 19 23:30 runtime_log.err
[2025-11-19 23:30:58] -rw------- 1 boincer umatlas       668 Nov 19 23:30 7lIMDmaGsf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmg3FKDmSQbfFn.diag
[2025-11-19 23:30:58] -rw-r--r-- 1 boincer umatlas     21099 Nov 19 23:30 stderr.txt
[2025-11-19 23:30:58] HITS file was successfully produced:
[2025-11-19 23:30:58] -rw------- 1 boincer umatlas 929385999 Nov 19 23:29 shared/HITS.pool.root.1
[2025-11-19 23:30:58]  *** Contents of shared directory: ***
[2025-11-19 23:30:58] total 1318116
[2025-11-19 23:30:58] -rw-r--r-- 2 boincer umatlas 411439610 Nov 19 10:47 ATLAS.root_0
[2025-11-19 23:30:58] -rw-r--r-- 2 boincer umatlas     15120 Nov 19 10:47 start_atlas.sh
[2025-11-19 23:30:58] -rw-r--r-- 2 boincer umatlas    590098 Nov 19 10:47 input.tar.gz
[2025-11-19 23:30:58] -rw------- 1 boincer umatlas 929385999 Nov 19 23:29 HITS.pool.root.1
[2025-11-19 23:30:58] -rw------- 1 boincer umatlas   8304640 Nov 19 23:30 result.tar.gz
23:31:00 (2091): run_atlas exited; CPU time 350277.466482
23:31:00 (2091): called boinc_finish(0)

</stderr_txt>
]]>

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