Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-25 22:30:32 (6480): vboxwrapper version 26210
2025-11-25 22:30:32 (6480): BOINC client version: 8.0.2
2025-11-25 22:30:32 (6480): Detected: VirtualBox VboxManage Interface (Version: 7.1.10)
2025-11-25 22:30:32 (6480): Successfully copied 'init_data.xml' to the shared directory.
2025-11-25 22:30:33 (6480): Create VM. (boinc_8097d12c376fb71d, slot#8)
2025-11-25 22:30:33 (6480): Setting Memory Size for VM. (4800MB)
2025-11-25 22:30:33 (6480): Setting CPU Count for VM. (8)
2025-11-25 22:30:34 (6480): Setting Chipset Options for VM.
2025-11-25 22:30:34 (6480): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-25 22:30:34 (6480): Setting Boot Options for VM.
2025-11-25 22:30:35 (6480): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-25 22:30:35 (6480): Enabling VM Network Access.
2025-11-25 22:30:35 (6480): Disabling USB Support for VM.
2025-11-25 22:30:35 (6480): Disabling COM Port Support for VM.
2025-11-25 22:30:36 (6480): Disabling LPT Port Support for VM.
2025-11-25 22:30:36 (6480): Disabling Audio Support for VM.
2025-11-25 22:30:36 (6480): Disabling Clipboard Support for VM.
2025-11-25 22:30:36 (6480): Disabling Drag and Drop Support for VM.
2025-11-25 22:30:37 (6480): Adding storage controller(s) to VM.
2025-11-25 22:30:37 (6480): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-25 22:30:39 (6480): Adding VirtualBox Guest Additions to VM.
2025-11-25 22:30:39 (6480): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-25 22:30:40 (6480): forwarding host port 56514 to guest port 80
2025-11-25 22:30:40 (6480): Enabling remote desktop for VM.
2025-11-25 22:30:40 (6480): Required extension pack not installed, remote desktop not enabled.
2025-11-25 22:30:40 (6480): Enabling shared directory for VM.
2025-11-25 22:30:41 (6480): Starting VM using VBoxManage interface. (boinc_8097d12c376fb71d, slot#8)
2025-11-25 22:30:46 (6480): Successfully started VM. (PID = '13080')
2025-11-25 22:30:46 (6480): Reporting VM Process ID to BOINC.
2025-11-25 22:30:46 (6480): Guest Log: BIOS: VirtualBox 7.1.10
2025-11-25 22:30:46 (6480): Guest Log: CPUID EDX: 0x178bfbff
2025-11-25 22:30:46 (6480): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-25 22:30:46 (6480): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-25 22:30:46 (6480): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-25 22:30:46 (6480): Detected: Web Application Enabled (http://localhost:56514)
2025-11-25 22:30:46 (6480): Preference change detected
2025-11-25 22:30:46 (6480): Setting CPU throttle for VM. (100%)
2025-11-25 22:30:46 (6480): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-25 22:30:48 (6480): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-25 22:30:48 (6480): Guest Log: BIOS: Booting from Hard Disk...
2025-11-25 22:30:50 (6480): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-25 22:30:50 (6480): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-25 22:30:50 (6480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-25 22:30:50 (6480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-25 22:30:50 (6480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-25 22:30:50 (6480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-25 22:30:50 (6480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-25 22:30:50 (6480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-25 22:30:50 (6480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-25 22:30:50 (6480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-25 22:30:50 (6480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-25 22:30:50 (6480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-25 22:30:50 (6480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-25 22:30:50 (6480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-25 22:30:50 (6480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-25 22:30:50 (6480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-25 22:30:50 (6480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-25 22:30:50 (6480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-25 22:30:50 (6480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-25 22:30:50 (6480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-25 22:30:50 (6480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-25 22:30:50 (6480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-25 22:30:50 (6480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-25 22:30:50 (6480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-25 22:30:50 (6480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-25 22:30:50 (6480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-25 22:30:50 (6480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-25 22:30:50 (6480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-25 22:30:50 (6480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-25 22:30:50 (6480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-25 22:30:50 (6480): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-25 22:30:50 (6480): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-25 22:30:55 (6480): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-25 22:30:55 (6480): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-25 22:31:00 (6480): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-25 22:31:00 (6480): Guest Log: 00:00:00.000148 main     Log opened 2025-11-25T22:30:58.569068000Z
2025-11-25 22:31:00 (6480): Guest Log: 00:00:00.000247 main     OS Product: Linux
2025-11-25 22:31:00 (6480): Guest Log: 00:00:00.000274 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-25 22:31:00 (6480): Guest Log: 00:00:00.000295 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-25 22:31:00 (6480): Guest Log: 00:00:00.000317 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-25 22:31:00 (6480): Guest Log: 00:00:00.000318 main     Process ID: 1378
2025-11-25 22:31:00 (6480): Guest Log: 00:00:00.000319 main     Package type: LINUX_64BITS_GENERIC
2025-11-25 22:31:00 (6480): Guest Log: 00:00:00.001094 main     5.2.32 r132073 started. Verbose level = 0
2025-11-25 22:31:01 (6480): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-25 22:31:01 (6480): Guest Log: [INFO] Mounting shared directory
2025-11-25 22:31:01 (6480): Guest Log: [INFO] Checking for init_data.xml
2025-11-25 22:31:05 (6480): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-25 22:31:05 (6480): Guest Log: [INFO] Detected branch: prod
2025-11-25 22:31:05 (6480): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-25 22:31:05 (6480): Guest Log: Copying input files
2025-11-25 22:31:07 (6480): Guest Log: Copied input files into RunAtlas.
2025-11-25 22:31:07 (6480): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-25 22:31:07 (6480): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-25 22:31:07 (6480): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-25 22:31:07 (6480): Guest Log: Further information can be found at the LHC@home message board.
2025-11-25 22:31:10 (6480): Guest Log: 00:00:10.005673 timesync vgsvcTimeSyncWorker: Radical guest time change: 28 812 063 967 000ns (GuestNow=1 764 138 670 635 222 000 ns GuestLast=1 764 109 858 571 255 000 ns fSetTimeLastLoop=true )
2025-11-25 22:31:16 (6480): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-25 22:31:16 (6480): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-25 22:31:16 (6480): Guest Log: 2.6.3.0 1679 0 32216 153312 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-25 22:31:17 (6480): Guest Log: copied the webapp to /var/www
2025-11-25 22:31:17 (6480): Guest Log: ATHENA_PROC_NUMBER=8
2025-11-25 22:31:17 (6480): Guest Log: ATHENA_CORE_NUMBER=8
2025-11-25 22:31:17 (6480): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-25 22:31:17 (6480): Guest Log:  *** Starting ATLAS job. (PandaID=6892547925 taskID=47493029) ***
2025-11-26 00:11:04 (6480): Status Report: Elapsed Time: '6000.000000'
2025-11-26 00:11:04 (6480): Status Report: CPU Time: '42671.453125'
2025-11-26 01:51:22 (6480): Status Report: Elapsed Time: '12000.000000'
2025-11-26 01:51:22 (6480): Status Report: CPU Time: '87711.937500'
2025-11-26 03:31:46 (6480): Status Report: Elapsed Time: '18000.743826'
2025-11-26 03:31:46 (6480): Status Report: CPU Time: '132760.609375'
2025-11-26 05:12:03 (6480): Status Report: Elapsed Time: '24000.743826'
2025-11-26 05:12:03 (6480): Status Report: CPU Time: '177870.890625'
2025-11-26 06:52:22 (6480): Status Report: Elapsed Time: '30000.743826'
2025-11-26 06:52:22 (6480): Status Report: CPU Time: '222961.312500'
2025-11-26 08:32:41 (6480): Status Report: Elapsed Time: '36000.743826'
2025-11-26 08:32:41 (6480): Status Report: CPU Time: '268037.421875'
2025-11-26 10:12:59 (6480): Status Report: Elapsed Time: '42000.743826'
2025-11-26 10:12:59 (6480): Status Report: CPU Time: '313176.796875'
2025-11-26 11:34:37 (6480): Guest Log:  *** Job finished ***
2025-11-26 11:34:37 (6480): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-26 11:34:37 (6480): Guest Log: 2025-11-26 19:33:39,893 | INFO     | [payload] failed_post thread has finished
2025-11-26 11:34:37 (6480): Guest Log: 2025-11-26 19:33:42,282 | INFO     | [data] queue_monitor thread has finished
2025-11-26 11:34:37 (6480): Guest Log: 2025-11-26 19:34:30,447 | INFO     | [monitor] cgroup control has ended
2025-11-26 11:34:37 (6480): Guest Log: 2025-11-26 19:34:30,858 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140307375966016)>', '<ExcThread(monitor, started 140306565551872)>']
2025-11-26 11:34:37 (6480): Guest Log: 2025-11-26 19:34:31,334 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-26 11:34:37 (6480): Guest Log: 2025-11-26 19:34:31,334 | INFO     | [monitor] control thread has ended
2025-11-26 11:34:37 (6480): Guest Log: 2025-11-26 19:34:35,898 | INFO     | all workflow threads have been joined
2025-11-26 11:34:37 (6480): Guest Log: 2025-11-26 19:34:35,899 | INFO     | end of generic workflow (traces error code: 0)
2025-11-26 11:34:37 (6480): Guest Log: 2025-11-26 19:34:35,899 | INFO     | traces error code: 0
2025-11-26 11:34:37 (6480): Guest Log: 2025-11-26 19:34:35,900 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-26 11:34:37 (6480): Guest Log: 2025-11-26 19:34:36,033 [wrapper] ==== pilot stdout END ====
2025-11-26 11:34:37 (6480): Guest Log: 2025-11-26 19:34:36,037 [wrapper] ==== wrapper stdout RESUME ====
2025-11-26 11:34:37 (6480): Guest Log: 2025-11-26 19:34:36,042 [wrapper] pilotpid: 6100
2025-11-26 11:34:37 (6480): Guest Log: 2025-11-26 19:34:36,046 [wrapper] Pilot exit status: 0
2025-11-26 11:34:37 (6480): Guest Log: 2025-11-26 19:34:36,064 [wrapper] pandaids: 6892547925
2025-11-26 11:34:37 (6480): Guest Log: 2025-11-26 19:34:36,099 [wrapper] cleanup supervisor_pilot  1020 6101
2025-11-26 11:34:37 (6480): Guest Log: 2025-11-26 19:34:36,104 [wrapper] Test setup, not cleaning
2025-11-26 11:34:37 (6480): Guest Log: 2025-11-26 19:34:36,109 [wrapper] apfmon messages muted
2025-11-26 11:34:37 (6480): Guest Log: 2025-11-26 19:34:36,113 [wrapper] ==== wrapper stdout END ====
2025-11-26 11:34:37 (6480): Guest Log: 2025-11-26 19:34:36,118 [wrapper] ==== wrapper stderr END ====
2025-11-26 11:34:37 (6480): Guest Log:  *** Error codes and diagnostics ***
2025-11-26 11:34:37 (6480): Guest Log:     "exeErrorCode": 0,
2025-11-26 11:34:37 (6480): Guest Log:     "exeErrorDiag": "",
2025-11-26 11:34:37 (6480): Guest Log:     "pilotErrorCode": 0,
2025-11-26 11:34:37 (6480): Guest Log:     "pilotErrorDiag": "",
2025-11-26 11:34:37 (6480): Guest Log:  *** Listing of results directory ***
2025-11-26 11:34:37 (6480): Guest Log: total 910724
2025-11-26 11:34:37 (6480): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 19 08:32 pilot3.tar.gz
2025-11-26 11:34:37 (6480): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 19 08:35 runpilot2-wrapper.sh
2025-11-26 11:34:37 (6480): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 19 08:35 queuedata.json
2025-11-26 11:34:37 (6480): Guest Log: -rwxr-xr-x. 1 atlas atlas      9129 Nov 26 06:31 init_data.xml
2025-11-26 11:34:37 (6480): Guest Log: -rwxr-xr-x. 1 atlas atlas    590093 Nov 26 06:31 input.tar.gz
2025-11-26 11:34:37 (6480): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Nov 26 06:31 start_atlas.sh
2025-11-26 11:34:37 (6480): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 26 06:31 EVNT.47493027._000323.pool.root.1 -> /data/./ATLAS.root_0
2025-11-26 11:34:37 (6480): Guest Log: -rw-r--r--. 1 atlas atlas      2773 Nov 26 06:31 pandaJob.out
2025-11-26 11:34:37 (6480): Guest Log: -rw-------. 1 atlas atlas    991877 Nov 26 06:31 agis_schedconf.cvmfs.json
2025-11-26 11:34:37 (6480): Guest Log: drwx------. 5 atlas atlas      4096 Nov 26 06:31 pilot3
2025-11-26 11:34:37 (6480): Guest Log: -rw-------. 1 atlas atlas        95 Nov 26 19:32 pilot_heartbeat.json
2025-11-26 11:34:37 (6480): Guest Log: -rw-------. 1 atlas atlas 912611096 Nov 26 19:32 HITS.47493029._003183.pool.root.1
2025-11-26 11:34:37 (6480): Guest Log: -rw-------. 1 atlas atlas      1042 Nov 26 19:33 memory_monitor_summary.json
2025-11-26 11:34:37 (6480): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 26 19:33 agis_ddmendpoints.agis.ALL.json
2025-11-26 11:34:37 (6480): Guest Log: -rw-------. 1 atlas atlas   1987354 Nov 26 19:33 log.47493029._003183.job.log.tgz.1
2025-11-26 11:34:37 (6480): Guest Log: -rw-------. 1 atlas atlas      8634 Nov 26 19:33 heartbeat.json
2025-11-26 11:34:37 (6480): Guest Log: -rw-------. 1 atlas atlas      4612 Nov 26 19:34 pilotlog.txt
2025-11-26 11:34:37 (6480): Guest Log: -rw-------. 1 atlas atlas   6071439 Nov 26 19:34 log.47493029._003183.job.log.1
2025-11-26 11:34:37 (6480): Guest Log: -rw-------. 1 atlas atlas       353 Nov 26 19:34 output.list
2025-11-26 11:34:37 (6480): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 26 19:34 runtime_log
2025-11-26 11:34:37 (6480): Guest Log: -rw-------. 1 atlas atlas   8079360 Nov 26 19:34 result.tar.gz
2025-11-26 11:34:37 (6480): Guest Log: -rw-r--r--. 1 atlas atlas      8648 Nov 26 19:34 runtime_log.err
2025-11-26 11:34:37 (6480): Guest Log: -rw-------. 1 atlas atlas       670 Nov 26 19:34 MYHNDmLqsf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm83GKDm70STTo.diag
2025-11-26 11:34:37 (6480): Guest Log: Looking for outputfile HITS.47493029._003183.pool.root.1
2025-11-26 11:34:37 (6480): Guest Log: HITS file was successfully produced
2025-11-26 11:34:37 (6480): Guest Log: -rw-------. 1 atlas atlas 912611096 Nov 26 19:32 /home/atlas/RunAtlas/HITS.47493029._003183.pool.root.1
2025-11-26 11:34:40 (6480): Guest Log: Successfully finished the ATLAS job!
2025-11-26 11:34:40 (6480): Guest Log: Copying the results back to the shared directory!
2025-11-26 11:34:40 (6480): Guest Log:  *** Contents of shared directory: ***
2025-11-26 11:34:40 (6480): Guest Log: total 1302552
2025-11-26 11:34:40 (6480): Guest Log: -rwxrwxrwx. 1 root root 412491895 Nov 26 06:30 ATLAS.root_0
2025-11-26 11:34:40 (6480): Guest Log: -rwxrwxrwx. 1 root root 912611096 Nov 26 19:34 HITS.pool.root.1
2025-11-26 11:34:40 (6480): Guest Log: -rwxrwxrwx. 1 root root      9129 Nov 26 06:30 init_data.xml
2025-11-26 11:34:40 (6480): Guest Log: -rwxrwxrwx. 1 root root    590093 Nov 19 15:49 input.tar.gz
2025-11-26 11:34:40 (6480): Guest Log: -rwxrwxrwx. 1 root root   8079360 Nov 26 19:34 result.tar.gz
2025-11-26 11:34:40 (6480): Guest Log: -rwxrwxrwx. 1 root root     15120 Nov 19 15:49 start_atlas.sh
2025-11-26 11:34:40 (6480): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-26 11:34:40 (6480): VM Completion File Detected.
2025-11-26 11:34:40 (6480): Powering off VM.
2025-11-26 11:34:41 (6480): Successfully stopped VM.
2025-11-26 11:34:41 (6480): Deregistering VM. (boinc_8097d12c376fb71d, slot#8)
2025-11-26 11:34:41 (6480): Removing network bandwidth throttle group from VM.
2025-11-26 11:34:41 (6480): Removing VM from VirtualBox.
2025-11-26 11:34:47 (6480): called boinc_finish(0)

</stderr_txt>
]]>

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