Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:22:35 (1462141): wrapper (7.7.26015): starting
03:22:35 (1462141): wrapper: running run_atlas (--nthreads 3)
[2025-11-22 03:22:35] Arguments: --nthreads 3
[2025-11-22 03:22:35] Threads: 3
[2025-11-22 03:22:35] Checking for CVMFS
[2025-11-22 03:22:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-22 03:22:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-22 03:22:35] Running cvmfs_config stat atlas.cern.ch
[2025-11-22 03:22:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-22 03:22:35] 2.9.2.0 630443 4900 88404 153155 0 81 36559832 36864001 0 130560 0 1819061 99.881 334781 4952 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-22 03:22:35] CVMFS is ok
[2025-11-22 03:22:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 03:22:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 03:22:35] Further information can be found at the LHC@home message board.
[2025-11-22 03:22:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 03:22:35] Checking for apptainer binary...
[2025-11-22 03:22:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-22 03:22:35] Running /usr/bin/apptainer --version
[2025-11-22 03:22:35] apptainer version 1.4.1-1.1
[2025-11-22 03:22:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 03:22:35] legendA163
[2025-11-22 03:22:35] apptainer works
[2025-11-22 03:22:35] Set ATHENA_PROC_NUMBER=3
[2025-11-22 03:22:35] Set ATHENA_CORE_NUMBER=3
[2025-11-22 03:22:35] Starting ATLAS job with PandaID=6892548601
[2025-11-22 03:22:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 11:19:29]  *** The last 200 lines of the pilot log: ***
[2025-11-22 11:19:29] 2025-11-22 10:18:54,105 | INFO     | time since job start (28573s) is within the limit (172800.0s)
[2025-11-22 11:19:29] 2025-11-22 10:18:55,504 | INFO     | monitor loop #2175: job 0:6892548601 is in state 'finished'
[2025-11-22 11:19:29] 2025-11-22 10:18:55,504 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 11:19:29] 2025-11-22 10:18:56,111 | INFO     | time since job start (28575s) is within the limit (172800.0s)
[2025-11-22 11:19:29] 2025-11-22 10:18:56,531 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 11:19:29] 2025-11-22 10:18:56,532 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3664.6013333333335
[2025-11-22 11:19:29] 2025-11-22 10:18:56,533 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6892548601/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 11:19:29] 2025-11-22 10:18:56,533 | INFO     | extracted standard info from prmon json
[2025-11-22 11:19:29] 2025-11-22 10:18:56,533 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 11:19:29] 2025-11-22 10:18:56,533 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 11:19:29] 2025-11-22 10:18:56,536 | INFO     | fitting pss+swap vs Time
[2025-11-22 11:19:29] 2025-11-22 10:18:56,536 | INFO     | sum of square deviations: 31784398737.0
[2025-11-22 11:19:29] 2025-11-22 10:18:56,538 | INFO     | sum of deviations: 198465158742.50003
[2025-11-22 11:19:29] 2025-11-22 10:18:56,538 | INFO     | mean x: 1763792424.5
[2025-11-22 11:19:29] 2025-11-22 10:18:56,538 | INFO     | mean y: 2197572.856837607
[2025-11-22 11:19:29] 2025-11-22 10:18:56,538 | INFO     | intersect: -11011109503.162163
[2025-11-22 11:19:29] 2025-11-22 10:18:56,538 | INFO     | chi2: 3.2308719515195197
[2025-11-22 11:19:29] 2025-11-22 10:18:56,539 | INFO     | sum of square deviations: 30776510072.0
[2025-11-22 11:19:29] 2025-11-22 10:18:56,540 | INFO     | sum of deviations: 237017746935.00003
[2025-11-22 11:19:29] 2025-11-22 10:18:56,540 | INFO     | mean x: 1763792272.0
[2025-11-22 11:19:29] 2025-11-22 10:18:56,540 | INFO     | mean y: 2203366.1468682503
[2025-11-22 11:19:29] 2025-11-22 10:18:56,540 | INFO     | intersect: -13581210393.009026
[2025-11-22 11:19:29] 2025-11-22 10:18:56,541 | INFO     | chi2: 2.354669223840207
[2025-11-22 11:19:29] 2025-11-22 10:18:56,541 | INFO     | current chi2=2.354669223840207 (change=27.119698360909144 %)
[2025-11-22 11:19:29] 2025-11-22 10:18:56,541 | INFO     | sum of square deviations: 29790156694.5
[2025-11-22 11:19:29] 2025-11-22 10:18:56,542 | INFO     | sum of deviations: 234445718291.0
[2025-11-22 11:19:29] 2025-11-22 10:18:56,543 | INFO     | mean x: 1763792119.5
[2025-11-22 11:19:29] 2025-11-22 10:18:56,543 | INFO     | mean y: 2202968.253275109
[2025-11-22 11:19:29] 2025-11-22 10:18:56,543 | INFO     | intersect: -13878674350.1439
[2025-11-22 11:19:29] 2025-11-22 10:18:56,543 | INFO     | chi2: 2.3521147914660956
[2025-11-22 11:19:29] 2025-11-22 10:18:56,543 | INFO     | current chi2=2.3521147914660956 (change=0.10848370328404647 %)
[2025-11-22 11:19:29] 2025-11-22 10:18:56,543 | INFO     | right removable region: 457
[2025-11-22 11:19:29] 2025-11-22 10:18:56,543 | INFO     | sum of square deviations: 30776510072.0
[2025-11-22 11:19:29] 2025-11-22 10:18:56,545 | INFO     | sum of deviations: 100005561595.99991
[2025-11-22 11:19:29] 2025-11-22 10:18:56,545 | INFO     | mean x: 1763792577.0
[2025-11-22 11:19:29] 2025-11-22 10:18:56,545 | INFO     | mean y: 2212450.142548596
[2025-11-22 11:19:29] 2025-11-22 10:18:56,545 | INFO     | intersect: -5729076340.857084
[2025-11-22 11:19:29] 2025-11-22 10:18:56,545 | INFO     | chi2: 1.1107591135721395
[2025-11-22 11:19:29] 2025-11-22 10:18:56,545 | INFO     | current chi2=1.1107591135721395 (change=65.62045385148318 %)
[2025-11-22 11:19:29] 2025-11-22 10:18:56,545 | INFO     | sum of square deviations: 29790156694.5
[2025-11-22 11:19:29] 2025-11-22 10:18:56,547 | INFO     | sum of deviations: 78458683730.00003
[2025-11-22 11:19:29] 2025-11-22 10:18:56,547 | INFO     | mean x: 1763792729.5
[2025-11-22 11:19:29] 2025-11-22 10:18:56,547 | INFO     | mean y: 2215765.4890829693
[2025-11-22 11:19:29] 2025-11-22 10:18:56,547 | INFO     | intersect: -4643105752.899012
[2025-11-22 11:19:29] 2025-11-22 10:18:56,547 | INFO     | chi2: 0.9425310437309469
[2025-11-22 11:19:29] 2025-11-22 10:18:56,547 | INFO     | current chi2=0.9425310437309469 (change=15.145324290896928 %)
[2025-11-22 11:19:29] 2025-11-22 10:18:56,547 | INFO     | left removable region: 20
[2025-11-22 11:19:29] 2025-11-22 10:18:56,547 | INFO     | sum of square deviations: 25877389378.0
[2025-11-22 11:19:29] 2025-11-22 10:18:56,549 | INFO     | sum of deviations: 103485729448.0
[2025-11-22 11:19:29] 2025-11-22 10:18:56,549 | INFO     | mean x: 1763792699.0
[2025-11-22 11:19:29] 2025-11-22 10:18:56,549 | INFO     | mean y: 2223714.757437071
[2025-11-22 11:19:29] 2025-11-22 10:18:56,549 | INFO     | intersect: -7051322969.75664
[2025-11-22 11:19:29] 2025-11-22 10:18:56,549 | INFO     | chi2: 0.05347510122553914
[2025-11-22 11:19:29] 2025-11-22 10:18:56,549 | INFO     | current memory leak: 4.00 B/s (using 437 data points, chi2=0.05)
[2025-11-22 11:19:29] 2025-11-22 10:18:56,549 | INFO     | could have reported an average CPU frequency of 3893 MHz (19 samples)
[2025-11-22 11:19:29] 2025-11-22 10:18:56,549 | INFO     | ..............................
[2025-11-22 11:19:29] 2025-11-22 10:18:56,549 | INFO     | . Timing measurements:
[2025-11-22 11:19:29] 2025-11-22 10:18:56,549 | INFO     | . get job = 0 s
[2025-11-22 11:19:29] 2025-11-22 10:18:56,550 | INFO     | . initial setup = 1 s
[2025-11-22 11:19:29] 2025-11-22 10:18:56,550 | INFO     | . payload setup = 3 s
[2025-11-22 11:19:29] 2025-11-22 10:18:56,550 | INFO     | . stage-in = 0 s
[2025-11-22 11:19:29] 2025-11-22 10:18:56,550 | INFO     | . payload execution = 28547 s
[2025-11-22 11:19:29] 2025-11-22 10:18:56,550 | INFO     | . stage-out = 0 s
[2025-11-22 11:19:29] 2025-11-22 10:18:56,550 | INFO     | . log creation = 0 s
[2025-11-22 11:19:29] 2025-11-22 10:18:56,550 | INFO     | ..............................
[2025-11-22 11:19:29] 2025-11-22 10:18:56,580 | INFO     | 
[2025-11-22 11:19:29] 2025-11-22 10:18:56,580 | INFO     | job summary report
[2025-11-22 11:19:29] 2025-11-22 10:18:56,580 | INFO     | --------------------------------------------------
[2025-11-22 11:19:29] 2025-11-22 10:18:56,580 | INFO     | PanDA job id: 6892548601
[2025-11-22 11:19:29] 2025-11-22 10:18:56,580 | INFO     | task id: 47493029
[2025-11-22 11:19:29] 2025-11-22 10:18:56,580 | INFO     | errors: (none)
[2025-11-22 11:19:29] 2025-11-22 10:18:56,580 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 11:19:29] 2025-11-22 10:18:56,580 | INFO     | pilot state: finished 
[2025-11-22 11:19:29] 2025-11-22 10:18:56,580 | INFO     | transexitcode: 0
[2025-11-22 11:19:29] 2025-11-22 10:18:56,580 | INFO     | exeerrorcode: 0
[2025-11-22 11:19:29] 2025-11-22 10:18:56,580 | INFO     | exeerrordiag: 
[2025-11-22 11:19:29] 2025-11-22 10:18:56,580 | INFO     | exitcode: 0
[2025-11-22 11:19:29] 2025-11-22 10:18:56,580 | INFO     | exitmsg: OK
[2025-11-22 11:19:29] 2025-11-22 10:18:56,580 | INFO     | cpuconsumptiontime: 84425 s
[2025-11-22 11:19:29] 2025-11-22 10:18:56,580 | INFO     | nevents: 1000
[2025-11-22 11:19:29] 2025-11-22 10:18:56,580 | INFO     | neventsw: 0
[2025-11-22 11:19:29] 2025-11-22 10:18:56,580 | INFO     | pid: 1472319
[2025-11-22 11:19:29] 2025-11-22 10:18:56,580 | INFO     | pgrp: 1472319
[2025-11-22 11:19:29] 2025-11-22 10:18:56,580 | INFO     | corecount: 3
[2025-11-22 11:19:29] 2025-11-22 10:18:56,580 | INFO     | event service: False
[2025-11-22 11:19:29] 2025-11-22 10:18:56,580 | INFO     | sizes: {0: 2298799, 2: 2299061, 11: 2299089, 28553: 2337876, 28554: 2337875, 28555: 2347115, 28562: 2347305}
[2025-11-22 11:19:29] 2025-11-22 10:18:56,580 | INFO     | --------------------------------------------------
[2025-11-22 11:19:29] 2025-11-22 10:18:56,580 | INFO     | 
[2025-11-22 11:19:29] 2025-11-22 10:18:56,580 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-22 11:19:29] 2025-11-22 10:18:56,591 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 11:19:29] 2025-11-22 10:18:56,591 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 11:19:29] 2025-11-22 10:18:56,591 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 11:19:29] 2025-11-22 10:18:56,592 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 11:19:29] 2025-11-22 10:18:56,592 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 11:19:29] 2025-11-22 10:18:56,592 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 11:19:29] 2025-11-22 10:18:56,592 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 11:19:29] 2025-11-22 10:18:56,592 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 11:19:29] 2025-11-22 10:18:56,592 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 11:19:29] 2025-11-22 10:18:56,592 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 11:19:29] 2025-11-22 10:18:56,592 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 11:19:29] 2025-11-22 10:18:56,592 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 11:19:29] 2025-11-22 10:18:56,592 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 11:19:29] 2025-11-22 10:18:56,592 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 11:19:29] 2025-11-22 10:18:56,592 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 11:19:29] 2025-11-22 10:18:56,592 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 11:19:29] 2025-11-22 10:18:56,592 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 11:19:29] 2025-11-22 10:18:56,592 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 11:19:29] 2025-11-22 10:18:56,592 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 11:19:29] 2025-11-22 10:18:56,592 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 11:19:29] 2025-11-22 10:18:56,592 | INFO     | job 6892548601 has completed (purged errors)
[2025-11-22 11:19:29] 2025-11-22 10:18:56,592 | INFO     | overall cleanup function is called
[2025-11-22 11:19:29] 2025-11-22 10:18:57,600 | INFO     | --- collectZombieJob: --- 10, [1472319]
[2025-11-22 11:19:29] 2025-11-22 10:18:57,601 | INFO     | zombie collector waiting for pid 1472319
[2025-11-22 11:19:29] 2025-11-22 10:18:57,601 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 11:19:29] 2025-11-22 10:18:57,601 | INFO     | collected zombie processes
[2025-11-22 11:19:29] 2025-11-22 10:18:57,601 | INFO     | will attempt to kill all subprocesses of pid=1472319
[2025-11-22 11:19:29] 2025-11-22 10:18:57,656 | INFO     | process IDs to be killed: [1472319] (in reverse order)
[2025-11-22 11:19:29] 2025-11-22 10:18:57,682 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 11:19:29] 2025-11-22 10:18:57,683 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 11:19:29] 2025-11-22 10:18:57,684 | INFO     | did not find any defunct processes belonging to 1472319
[2025-11-22 11:19:29] 2025-11-22 10:18:57,686 | INFO     | did not find any defunct processes belonging to 1472319
[2025-11-22 11:19:29] 2025-11-22 10:18:57,686 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 11:19:29] 2025-11-22 10:18:57,686 | INFO     | ready for new job
[2025-11-22 11:19:29] 2025-11-22 10:18:57,687 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 11:19:29] 2025-11-22 10:18:57,688 | INFO     | ***************************************
[2025-11-22 11:19:29] 2025-11-22 10:18:57,688 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 11:19:29] 2025-11-22 10:18:57,688 | INFO     | ***************************************
[2025-11-22 11:19:29] 2025-11-22 10:18:57,688 | INFO     | 
[2025-11-22 11:19:29] 2025-11-22 10:18:57,688 | INFO     | architecture information:
[2025-11-22 11:19:29] 2025-11-22 10:18:57,688 | INFO     | executing command: cat /etc/os-release
[2025-11-22 11:19:29] 2025-11-22 10:18:57,697 | INFO     | cat /etc/os-release:
[2025-11-22 11:19:29] NAME="CentOS Linux"
[2025-11-22 11:19:29] VERSION="7 (Core)"
[2025-11-22 11:19:29] ID="centos"
[2025-11-22 11:19:29] ID_LIKE="rhel fedora"
[2025-11-22 11:19:29] VERSION_ID="7"
[2025-11-22 11:19:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 11:19:29] ANSI_COLOR="0;31"
[2025-11-22 11:19:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 11:19:29] HOME_URL="https://www.centos.org/"
[2025-11-22 11:19:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 11:19:29] 
[2025-11-22 11:19:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 11:19:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 11:19:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 11:19:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 11:19:29] 
[2025-11-22 11:19:29] 2025-11-22 10:18:57,697 | INFO     | ***************************************
[2025-11-22 11:19:29] 2025-11-22 10:18:58,200 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-22 11:19:29] 2025-11-22 10:18:58,212 | INFO     | sufficient remaining disk space (364849922048 B)
[2025-11-22 11:19:29] 2025-11-22 10:18:58,212 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 11:19:29] 2025-11-22 10:18:58,212 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 11:19:29] 2025-11-22 10:18:58,213 | INFO     | update_server=False
[2025-11-22 11:19:29] 2025-11-22 10:18:58,213 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 11:19:29] 2025-11-22 10:18:58,213 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 11:19:29] 2025-11-22 10:18:58,213 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 11:19:29] 2025-11-22 10:18:58,990 | INFO     | all data control threads have been joined
[2025-11-22 11:19:29] 2025-11-22 10:18:59,014 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 11:19:29] 2025-11-22 10:18:59,014 | INFO     | aborting loop
[2025-11-22 11:19:29] 2025-11-22 10:18:59,195 | INFO     | all payload control threads have been joined
[2025-11-22 11:19:29] 2025-11-22 10:18:59,218 | INFO     | [job] queue monitor thread has finished
[2025-11-22 11:19:29] 2025-11-22 10:18:59,219 | INFO     | [job] retrieve thread has finished
[2025-11-22 11:19:29] 2025-11-22 10:18:59,229 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 11:19:29] 2025-11-22 10:18:59,528 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 11:19:29] 2025-11-22 10:18:59,564 | INFO     | [data] copytool_in thread has finished
[2025-11-22 11:19:29] 2025-11-22 10:18:59,633 | INFO     | all job control threads have been joined
[2025-11-22 11:19:29] 2025-11-22 10:18:59,996 | INFO     | [data] control thread has finished
[2025-11-22 11:19:29] 2025-11-22 10:19:00,019 | INFO     | [job] job monitor thread has finished
[2025-11-22 11:19:29] 2025-11-22 10:19:00,052 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 11:19:29] 2025-11-22 10:19:00,074 | INFO     | [job] validate thread has finished
[2025-11-22 11:19:29] 2025-11-22 10:19:00,175 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 11:19:29] 2025-11-22 10:19:00,201 | INFO     | [payload] control thread has finished
[2025-11-22 11:19:29] 2025-11-22 10:19:00,219 | INFO     | [data] copytool_out thread has finished
[2025-11-22 11:19:29] 2025-11-22 10:19:00,248 | INFO     | [payload] failed_post thread has finished
[2025-11-22 11:19:29] 2025-11-22 10:19:00,393 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 11:19:29] 2025-11-22 10:19:00,638 | INFO     | [job] control thread has finished
[2025-11-22 11:19:29] 2025-11-22 10:19:00,778 | INFO     | [payload] validate_post thread has finished
[2025-11-22 11:19:29] 2025-11-22 10:19:04,400 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 11:19:29] 2025-11-22 10:19:13,709 | INFO     | [monitor] cgroup control has ended
[2025-11-22 11:19:29] 2025-11-22 10:19:15,088 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139877773313856)>', '<ExcThread(monitor, started 139877010106112)>']
[2025-11-22 11:19:29] 2025-11-22 10:19:20,105 | INFO     | all workflow threads have been joined
[2025-11-22 11:19:29] 2025-11-22 10:19:20,105 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 11:19:29] 2025-11-22 10:19:20,106 | INFO     | traces error code: 0
[2025-11-22 11:19:29] 2025-11-22 10:19:20,106 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 11:19:29] 2025-11-22 10:19:29,252 | INFO     | PID=1465864 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 11:19:29] 2025-11-22 10:19:29,253 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 11:19:29] 2025-11-22 10:19:29,253 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 11:19:29] 2025-11-22 10:19:29,253 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 11:19:29] 2025-11-22 10:19:29,253 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 11:19:29] 2025-11-22 10:19:29,253 | INFO     | [monitor] control thread has ended
[2025-11-22 11:19:29] 2025-11-22 10:19:29,303 [wrapper] ==== pilot stdout END ====
[2025-11-22 11:19:29] 2025-11-22 10:19:29,305 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 11:19:29] 2025-11-22 10:19:29,308 [wrapper] pilotpid: 1465864
[2025-11-22 11:19:29] 2025-11-22 10:19:29,310 [wrapper] Pilot exit status: 0
[2025-11-22 11:19:29] 2025-11-22 10:19:29,317 [wrapper] pandaids: 6892548601
[2025-11-22 11:19:29] 2025-11-22 10:19:29,335 [wrapper] cleanup supervisor_pilot 1539642 1465865
[2025-11-22 11:19:29] 2025-11-22 10:19:29,338 [wrapper] Test setup, not cleaning
[2025-11-22 11:19:29] 2025-11-22 10:19:29,340 [wrapper] apfmon messages muted
[2025-11-22 11:19:29] 2025-11-22 10:19:29,342 [wrapper] ==== wrapper stdout END ====
[2025-11-22 11:19:29] 2025-11-22 10:19:29,345 [wrapper] ==== wrapper stderr END ====
[2025-11-22 11:19:29]  *** Error codes and diagnostics ***
[2025-11-22 11:19:29]     "exeErrorCode": 0,
[2025-11-22 11:19:29]     "exeErrorDiag": "",
[2025-11-22 11:19:29]     "pilotErrorCode": 0,
[2025-11-22 11:19:29]     "pilotErrorDiag": "",
[2025-11-22 11:19:29]  *** Listing of results directory ***
[2025-11-22 11:19:29] total 1302192
[2025-11-22 11:19:29] -rw-r--r-- 1 boinc boinc    576529 Nov 19 09:32 pilot3.tar.gz
[2025-11-22 11:19:29] -rwx------ 1 boinc boinc     36292 Nov 19 09:43 runpilot2-wrapper.sh
[2025-11-22 11:19:29] -rw-r--r-- 1 boinc boinc      5112 Nov 19 09:43 queuedata.json
[2025-11-22 11:19:29] -rw-r--r-- 1 boinc boinc       100 Nov 22 03:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 11:19:29] -rwxr-xr-x 1 boinc boinc      7986 Nov 22 03:22 run_atlas
[2025-11-22 11:19:29] -rw-r--r-- 1 boinc boinc       105 Nov 22 03:22 job.xml
[2025-11-22 11:19:29] -rw-r--r-- 2 boinc boinc 410202313 Nov 22 03:22 EVNT.47493027._000336.pool.root.1
[2025-11-22 11:19:29] -rw-r--r-- 2 boinc boinc    590091 Nov 22 03:22 input.tar.gz
[2025-11-22 11:19:29] -rw-r--r-- 2 boinc boinc     15120 Nov 22 03:22 start_atlas.sh
[2025-11-22 11:19:29] drwxrwx--x 2 boinc boinc      4096 Nov 22 03:22 shared
[2025-11-22 11:19:29] -rw-r--r-- 1 boinc boinc         0 Nov 22 03:22 boinc_setup_complete
[2025-11-22 11:19:29] -rw-r--r-- 1 boinc boinc      6450 Nov 22 03:22 init_data.xml
[2025-11-22 11:19:29] -rw-r--r-- 1 boinc boinc         0 Nov 22 03:22 boinc_lockfile
[2025-11-22 11:19:29] -rw-r--r-- 1 boinc boinc      2773 Nov 22 03:22 pandaJob.out
[2025-11-22 11:19:29] -rw------- 1 boinc boinc    989776 Nov 22 03:22 agis_schedconf.cvmfs.json
[2025-11-22 11:19:29] drwx------ 5 boinc boinc      4096 Nov 22 03:22 pilot3
[2025-11-22 11:19:29] -rw-r--r-- 1 boinc boinc       531 Nov 22 11:16 boinc_task_state.xml
[2025-11-22 11:19:29] -rw------- 1 boinc boinc 908978014 Nov 22 11:18 HITS.47493029._003316.pool.root.1
[2025-11-22 11:19:29] -rw------- 1 boinc boinc      1033 Nov 22 11:18 memory_monitor_summary.json
[2025-11-22 11:19:29] -rw------- 1 boinc boinc   1526164 Nov 22 11:18 agis_ddmendpoints.agis.ALL.json
[2025-11-22 11:19:29] -rw------- 1 boinc boinc   1158055 Nov 22 11:18 log.47493029._003316.job.log.tgz.1
[2025-11-22 11:19:29] -rw------- 1 boinc boinc      8564 Nov 22 11:18 heartbeat.json
[2025-11-22 11:19:29] -rw-r--r-- 1 boinc boinc        28 Nov 22 11:19 wrapper_checkpoint.txt
[2025-11-22 11:19:29] -rw-r--r-- 1 boinc boinc      8192 Nov 22 11:19 boinc_mmap_file
[2025-11-22 11:19:29] -rw------- 1 boinc boinc       747 Nov 22 11:19 pilotlog.txt
[2025-11-22 11:19:29] -rw------- 1 boinc boinc        95 Nov 22 11:19 pilot_heartbeat.json
[2025-11-22 11:19:29] -rw------- 1 boinc boinc   4017786 Nov 22 11:19 log.47493029._003316.job.log.1
[2025-11-22 11:19:29] -rw------- 1 boinc boinc       353 Nov 22 11:19 output.list
[2025-11-22 11:19:29] -rw-r--r-- 1 boinc boinc       620 Nov 22 11:19 runtime_log
[2025-11-22 11:19:29] -rw------- 1 boinc boinc   5191680 Nov 22 11:19 result.tar.gz
[2025-11-22 11:19:29] -rw-r--r-- 1 boinc boinc      8798 Nov 22 11:19 runtime_log.err
[2025-11-22 11:19:29] -rw------- 1 boinc boinc       669 Nov 22 11:19 EcFMDm8xsf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmB5GKDmyS5aPn.diag
[2025-11-22 11:19:29] -rw-r--r-- 1 boinc boinc     21266 Nov 22 11:19 stderr.txt
[2025-11-22 11:19:29] HITS file was successfully produced:
[2025-11-22 11:19:29] -rw------- 1 boinc boinc 908978014 Nov 22 11:18 shared/HITS.pool.root.1
[2025-11-22 11:19:29]  *** Contents of shared directory: ***
[2025-11-22 11:19:29] total 1293940
[2025-11-22 11:19:29] -rw-r--r-- 2 boinc boinc 410202313 Nov 22 03:22 ATLAS.root_0
[2025-11-22 11:19:29] -rw-r--r-- 2 boinc boinc    590091 Nov 22 03:22 input.tar.gz
[2025-11-22 11:19:29] -rw-r--r-- 2 boinc boinc     15120 Nov 22 03:22 start_atlas.sh
[2025-11-22 11:19:29] -rw------- 1 boinc boinc 908978014 Nov 22 11:18 HITS.pool.root.1
[2025-11-22 11:19:29] -rw------- 1 boinc boinc   5191680 Nov 22 11:19 result.tar.gz
11:19:30 (1462141): run_atlas exited; CPU time 84482.919093
11:19:30 (1462141): called boinc_finish(0)

</stderr_txt>
]]>

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