Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
07:25:34 (494409): wrapper (7.7.26015): starting
07:25:34 (494409): wrapper: running run_atlas (--nthreads 4)
[2025-11-20 07:25:34] Arguments: --nthreads 4
[2025-11-20 07:25:34] Threads: 4
[2025-11-20 07:25:34] Checking for CVMFS
[2025-11-20 07:25:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 07:25:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 07:25:35] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 07:25:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 07:25:35] 2.13.3.0 32779 2954 52632 153074 0 84 2681080 4096001 464 130560 31 13734388 99.961 390099 897 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.178:3128 1
[2025-11-20 07:25:35] CVMFS is ok
[2025-11-20 07:25:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 07:25:35] Checking for apptainer binary...
[2025-11-20 07:25:35] apptainer is not installed, using version from CVMFS
[2025-11-20 07:25:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 07:25:35] senture-c621e-l
[2025-11-20 07:25:35] apptainer works
[2025-11-20 07:25:35] Set ATHENA_PROC_NUMBER=4
[2025-11-20 07:25:35] Set ATHENA_CORE_NUMBER=4
[2025-11-20 07:25:35] Starting ATLAS job with PandaID=6892525884
[2025-11-20 07:25:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 00:08:29]  *** The last 200 lines of the pilot log: ***
[2025-11-21 00:08:29] 2025-11-21 00:07:47,100 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 00:08:29] 2025-11-21 00:07:48,057 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-21 00:08:29] 2025-11-21 00:07:48,061 | INFO     | found 32 cores (32 cores per socket, 1 socket) HT, CPU MHz: 2600.0059999999967
[2025-11-21 00:08:29] 2025-11-21 00:07:48,073 | INFO     | using path: /var/lib/boinc-client/slots/11/PanDA_Pilot-6892525884/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 00:08:29] 2025-11-21 00:07:48,074 | INFO     | extracted standard info from prmon json
[2025-11-21 00:08:29] 2025-11-21 00:07:48,074 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 00:08:29] 2025-11-21 00:07:48,074 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 00:08:29] 2025-11-21 00:07:48,093 | INFO     | fitting pss+swap vs Time
[2025-11-21 00:08:29] 2025-11-21 00:07:48,096 | INFO     | sum of square deviations: 297241082828.4957
[2025-11-21 00:08:29] 2025-11-21 00:07:48,115 | INFO     | sum of deviations: 720966644538.897
[2025-11-21 00:08:29] 2025-11-21 00:07:48,116 | INFO     | mean x: 1763653611.5020285
[2025-11-21 00:08:29] 2025-11-21 00:07:48,116 | INFO     | mean y: 2247070.5517241377
[2025-11-21 00:08:29] 2025-11-21 00:07:48,116 | INFO     | intersect: -4275544593.755946
[2025-11-21 00:08:29] 2025-11-21 00:07:48,117 | INFO     | chi2: 5.567498808272225
[2025-11-21 00:08:29] 2025-11-21 00:07:48,119 | INFO     | sum of square deviations: 292742050245.99585
[2025-11-21 00:08:29] 2025-11-21 00:07:48,141 | INFO     | sum of deviations: 996243819313.6873
[2025-11-21 00:08:29] 2025-11-21 00:07:48,142 | INFO     | mean x: 1763653459.0020387
[2025-11-21 00:08:29] 2025-11-21 00:07:48,142 | INFO     | mean y: 2256401.1569826705
[2025-11-21 00:08:29] 2025-11-21 00:07:48,142 | INFO     | intersect: -5999713102.25234
[2025-11-21 00:08:29] 2025-11-21 00:07:48,143 | INFO     | chi2: 2.0720261363878683
[2025-11-21 00:08:29] 2025-11-21 00:07:48,144 | INFO     | current chi2=2.0720261363878683 (change=62.78353695721967 %)
[2025-11-21 00:08:29] 2025-11-21 00:07:48,145 | INFO     | sum of square deviations: 288288646425.9961
[2025-11-21 00:08:29] 2025-11-21 00:07:48,163 | INFO     | sum of deviations: 1044265009601.9355
[2025-11-21 00:08:29] 2025-11-21 00:07:48,164 | INFO     | mean x: 1763653306.5020492
[2025-11-21 00:08:29] 2025-11-21 00:07:48,164 | INFO     | mean y: 2258042.781762295
[2025-11-21 00:08:29] 2025-11-21 00:07:48,164 | INFO     | intersect: -6386205255.656247
[2025-11-21 00:08:29] 2025-11-21 00:07:48,165 | INFO     | chi2: 1.8732945570817394
[2025-11-21 00:08:29] 2025-11-21 00:07:48,166 | INFO     | current chi2=1.8732945570817394 (change=9.591171453685163 %)
[2025-11-21 00:08:29] 2025-11-21 00:07:48,166 | INFO     | right removable region: 975
[2025-11-21 00:08:29] 2025-11-21 00:07:48,167 | INFO     | sum of square deviations: 292742049025.9958
[2025-11-21 00:08:29] 2025-11-21 00:07:48,188 | INFO     | sum of deviations: 554962194422.1855
[2025-11-21 00:08:29] 2025-11-21 00:07:48,188 | INFO     | mean x: 1763653764.0020387
[2025-11-21 00:08:29] 2025-11-21 00:07:48,189 | INFO     | mean y: 2252686.9072375125
[2025-11-21 00:08:29] 2025-11-21 00:07:48,189 | INFO     | intersect: -3341172578.878901
[2025-11-21 00:08:29] 2025-11-21 00:07:48,190 | INFO     | chi2: 3.8736403086737052
[2025-11-21 00:08:29] 2025-11-21 00:07:48,191 | INFO     | current chi2=3.8736403086737052 (change=30.424047816261297 %)
[2025-11-21 00:08:29] 2025-11-21 00:07:48,192 | INFO     | sum of square deviations: 288288643985.9961
[2025-11-21 00:08:29] 2025-11-21 00:07:48,211 | INFO     | sum of deviations: 519280751603.704
[2025-11-21 00:08:29] 2025-11-21 00:07:48,211 | INFO     | mean x: 1763653916.5020492
[2025-11-21 00:08:29] 2025-11-21 00:07:48,211 | INFO     | mean y: 2253908.3985655736
[2025-11-21 00:08:29] 2025-11-21 00:07:48,212 | INFO     | intersect: -3174532796.298993
[2025-11-21 00:08:29] 2025-11-21 00:07:48,213 | INFO     | chi2: 3.8439972996291827
[2025-11-21 00:08:29] 2025-11-21 00:07:48,214 | INFO     | current chi2=3.8439972996291827 (change=0.7652493954626369 %)
[2025-11-21 00:08:29] 2025-11-21 00:07:48,214 | INFO     | left removable region: 20
[2025-11-21 00:08:29] 2025-11-21 00:07:48,215 | INFO     | sum of square deviations: 270077363117.99545
[2025-11-21 00:08:29] 2025-11-21 00:07:48,232 | INFO     | sum of deviations: 780611904509.733
[2025-11-21 00:08:29] 2025-11-21 00:07:48,233 | INFO     | mean x: 1763653886.0020943
[2025-11-21 00:08:29] 2025-11-21 00:07:48,233 | INFO     | mean y: 2267107.1340314136
[2025-11-21 00:08:29] 2025-11-21 00:07:48,233 | INFO     | intersect: -5095269402.234954
[2025-11-21 00:08:29] 2025-11-21 00:07:48,234 | INFO     | chi2: 0.10570953501887997
[2025-11-21 00:08:29] 2025-11-21 00:07:48,234 | INFO     | current memory leak: 2.89 B/s (using 955 data points, chi2=0.11)
[2025-11-21 00:08:29] 2025-11-21 00:07:48,236 | INFO     | could have reported an average CPU frequency of 2600 MHz (37 samples)
[2025-11-21 00:08:29] 2025-11-21 00:07:48,236 | INFO     | ..............................
[2025-11-21 00:08:29] 2025-11-21 00:07:48,236 | INFO     | . Timing measurements:
[2025-11-21 00:08:29] 2025-11-21 00:07:48,236 | INFO     | . get job = 0 s
[2025-11-21 00:08:29] 2025-11-21 00:07:48,236 | INFO     | . initial setup = 1 s
[2025-11-21 00:08:29] 2025-11-21 00:07:48,236 | INFO     | . payload setup = 5 s
[2025-11-21 00:08:29] 2025-11-21 00:07:48,237 | INFO     | . stage-in = 0 s
[2025-11-21 00:08:29] 2025-11-21 00:07:48,237 | INFO     | . payload execution = 60089 s
[2025-11-21 00:08:29] 2025-11-21 00:07:48,237 | INFO     | . stage-out = 2 s
[2025-11-21 00:08:29] 2025-11-21 00:07:48,237 | INFO     | . log creation = 0 s
[2025-11-21 00:08:29] 2025-11-21 00:07:48,237 | INFO     | ..............................
[2025-11-21 00:08:29] 2025-11-21 00:07:48,341 | INFO     | 
[2025-11-21 00:08:29] 2025-11-21 00:07:48,341 | INFO     | job summary report
[2025-11-21 00:08:29] 2025-11-21 00:07:48,341 | INFO     | --------------------------------------------------
[2025-11-21 00:08:29] 2025-11-21 00:07:48,341 | INFO     | PanDA job id: 6892525884
[2025-11-21 00:08:29] 2025-11-21 00:07:48,341 | INFO     | task id: 47493029
[2025-11-21 00:08:29] 2025-11-21 00:07:48,341 | INFO     | errors: (none)
[2025-11-21 00:08:29] 2025-11-21 00:07:48,341 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 00:08:29] 2025-11-21 00:07:48,342 | INFO     | pilot state: finished 
[2025-11-21 00:08:29] 2025-11-21 00:07:48,342 | INFO     | transexitcode: 0
[2025-11-21 00:08:29] 2025-11-21 00:07:48,342 | INFO     | exeerrorcode: 0
[2025-11-21 00:08:29] 2025-11-21 00:07:48,342 | INFO     | exeerrordiag: 
[2025-11-21 00:08:29] 2025-11-21 00:07:48,342 | INFO     | exitcode: 0
[2025-11-21 00:08:29] 2025-11-21 00:07:48,342 | INFO     | exitmsg: OK
[2025-11-21 00:08:29] 2025-11-21 00:07:48,342 | INFO     | cpuconsumptiontime: 233673 s
[2025-11-21 00:08:29] 2025-11-21 00:07:48,342 | INFO     | nevents: 1000
[2025-11-21 00:08:29] 2025-11-21 00:07:48,342 | INFO     | neventsw: 0
[2025-11-21 00:08:29] 2025-11-21 00:07:48,342 | INFO     | pid: 697473
[2025-11-21 00:08:29] 2025-11-21 00:07:48,342 | INFO     | pgrp: 697473
[2025-11-21 00:08:29] 2025-11-21 00:07:48,342 | INFO     | corecount: 4
[2025-11-21 00:08:29] 2025-11-21 00:07:48,343 | INFO     | event service: False
[2025-11-21 00:08:29] 2025-11-21 00:07:48,343 | INFO     | sizes: {0: 2297027, 1: 2297226, 4: 2297488, 11: 2297516, 60099: 2349402, 60101: 2360008, 60103: 2360192, 60110: 2360438}
[2025-11-21 00:08:29] 2025-11-21 00:07:48,343 | INFO     | --------------------------------------------------
[2025-11-21 00:08:29] 2025-11-21 00:07:48,343 | INFO     | 
[2025-11-21 00:08:29] 2025-11-21 00:07:48,343 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/11
[2025-11-21 00:08:29] 2025-11-21 00:07:48,374 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 00:08:29] 2025-11-21 00:07:48,375 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 00:08:29] 2025-11-21 00:07:48,375 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 00:08:29] 2025-11-21 00:07:48,375 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 00:08:29] 2025-11-21 00:07:48,375 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 00:08:29] 2025-11-21 00:07:48,375 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 00:08:29] 2025-11-21 00:07:48,375 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 00:08:29] 2025-11-21 00:07:48,375 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 00:08:29] 2025-11-21 00:07:48,375 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 00:08:29] 2025-11-21 00:07:48,376 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 00:08:29] 2025-11-21 00:07:48,376 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 00:08:29] 2025-11-21 00:07:48,376 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 00:08:29] 2025-11-21 00:07:48,376 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 00:08:29] 2025-11-21 00:07:48,376 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 00:08:29] 2025-11-21 00:07:48,376 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 00:08:29] 2025-11-21 00:07:48,376 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 00:08:29] 2025-11-21 00:07:48,376 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 00:08:29] 2025-11-21 00:07:48,376 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 00:08:29] 2025-11-21 00:07:48,376 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 00:08:29] 2025-11-21 00:07:48,376 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 00:08:29] 2025-11-21 00:07:48,376 | INFO     | job 6892525884 has completed (purged errors)
[2025-11-21 00:08:29] 2025-11-21 00:07:48,377 | INFO     | overall cleanup function is called
[2025-11-21 00:08:29] 2025-11-21 00:07:49,391 | INFO     | --- collectZombieJob: --- 10, [697473]
[2025-11-21 00:08:29] 2025-11-21 00:07:49,392 | INFO     | zombie collector waiting for pid 697473
[2025-11-21 00:08:29] 2025-11-21 00:07:49,392 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 00:08:29] 2025-11-21 00:07:49,392 | INFO     | collected zombie processes
[2025-11-21 00:08:29] 2025-11-21 00:07:49,392 | INFO     | will attempt to kill all subprocesses of pid=697473
[2025-11-21 00:08:29] 2025-11-21 00:07:49,778 | INFO     | process IDs to be killed: [697473] (in reverse order)
[2025-11-21 00:08:29] 2025-11-21 00:07:49,942 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 00:08:29] 2025-11-21 00:07:49,943 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 00:08:29] 2025-11-21 00:07:49,952 | INFO     | did not find any defunct processes belonging to 697473
[2025-11-21 00:08:29] 2025-11-21 00:07:49,961 | INFO     | did not find any defunct processes belonging to 697473
[2025-11-21 00:08:29] 2025-11-21 00:07:49,964 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 00:08:29] 2025-11-21 00:07:49,964 | INFO     | ready for new job
[2025-11-21 00:08:29] 2025-11-21 00:07:49,964 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 00:08:29] 2025-11-21 00:07:49,969 | INFO     | ***************************************
[2025-11-21 00:08:29] 2025-11-21 00:07:49,969 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 00:08:29] 2025-11-21 00:07:49,969 | INFO     | ***************************************
[2025-11-21 00:08:29] 2025-11-21 00:07:49,969 | INFO     | 
[2025-11-21 00:08:29] 2025-11-21 00:07:49,973 | INFO     | pilot is running in a VM
[2025-11-21 00:08:29] 2025-11-21 00:07:49,973 | INFO     | architecture information:
[2025-11-21 00:08:29] 2025-11-21 00:07:49,973 | INFO     | executing command: cat /etc/os-release
[2025-11-21 00:08:29] 2025-11-21 00:07:49,993 | INFO     | cat /etc/os-release:
[2025-11-21 00:08:29] NAME="CentOS Linux"
[2025-11-21 00:08:29] VERSION="7 (Core)"
[2025-11-21 00:08:29] ID="centos"
[2025-11-21 00:08:29] ID_LIKE="rhel fedora"
[2025-11-21 00:08:29] VERSION_ID="7"
[2025-11-21 00:08:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 00:08:29] ANSI_COLOR="0;31"
[2025-11-21 00:08:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 00:08:29] HOME_URL="https://www.centos.org/"
[2025-11-21 00:08:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 00:08:29] 
[2025-11-21 00:08:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 00:08:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 00:08:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 00:08:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 00:08:29] 
[2025-11-21 00:08:29] 2025-11-21 00:07:49,994 | INFO     | ***************************************
[2025-11-21 00:08:29] 2025-11-21 00:07:50,497 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/11
[2025-11-21 00:08:29] 2025-11-21 00:07:50,519 | INFO     | sufficient remaining disk space (93352624128 B)
[2025-11-21 00:08:29] 2025-11-21 00:07:50,520 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 00:08:29] 2025-11-21 00:07:50,520 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 00:08:29] 2025-11-21 00:07:50,520 | INFO     | update_server=False
[2025-11-21 00:08:29] 2025-11-21 00:07:50,520 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 00:08:29] 2025-11-21 00:07:50,520 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 00:08:29] 2025-11-21 00:07:50,613 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 00:08:29] 2025-11-21 00:07:50,614 | INFO     | aborting loop
[2025-11-21 00:08:29] 2025-11-21 00:07:50,948 | INFO     | all data control threads have been joined
[2025-11-21 00:08:29] 2025-11-21 00:07:51,117 | INFO     | all payload control threads have been joined
[2025-11-21 00:08:29] 2025-11-21 00:07:51,467 | INFO     | all job control threads have been joined
[2025-11-21 00:08:29] 2025-11-21 00:07:51,521 | INFO     | [job] retrieve thread has finished
[2025-11-21 00:08:29] 2025-11-21 00:07:51,619 | INFO     | [job] job monitor thread has finished
[2025-11-21 00:08:29] 2025-11-21 00:07:51,872 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 00:08:29] 2025-11-21 00:07:51,874 | INFO     | [payload] failed_post thread has finished
[2025-11-21 00:08:29] 2025-11-21 00:07:51,897 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 00:08:29] 2025-11-21 00:07:51,898 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 00:08:29] 2025-11-21 00:07:51,954 | INFO     | [data] control thread has finished
[2025-11-21 00:08:29] 2025-11-21 00:07:51,985 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 00:08:29] 2025-11-21 00:07:52,121 | INFO     | [payload] control thread has finished
[2025-11-21 00:08:29] 2025-11-21 00:07:52,474 | INFO     | [job] control thread has finished
[2025-11-21 00:08:29] 2025-11-21 00:07:52,526 | INFO     | [data] copytool_out thread has finished
[2025-11-21 00:08:29] 2025-11-21 00:07:52,802 | INFO     | [data] copytool_in thread has finished
[2025-11-21 00:08:29] 2025-11-21 00:07:52,875 | INFO     | [job] validate thread has finished
[2025-11-21 00:08:29] 2025-11-21 00:07:52,887 | INFO     | [payload] validate_post thread has finished
[2025-11-21 00:08:29] 2025-11-21 00:07:53,351 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 00:08:29] 2025-11-21 00:07:54,357 | INFO     | [job] queue monitor thread has finished
[2025-11-21 00:08:29] 2025-11-21 00:07:55,879 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 00:08:29] 2025-11-21 00:08:00,672 | INFO     | job.realtimelogging is not enabled
[2025-11-21 00:08:29] 2025-11-21 00:08:01,678 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 00:08:29] 2025-11-21 00:08:20,371 | INFO     | PID=541789 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-21 00:08:29] 2025-11-21 00:08:20,371 | INFO     | .. there are 16 such processes running
[2025-11-21 00:08:29] 2025-11-21 00:08:20,372 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 00:08:29] 2025-11-21 00:08:20,372 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 00:08:29] 2025-11-21 00:08:20,372 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 00:08:29] 2025-11-21 00:08:23,240 | INFO     | [monitor] cgroup control has ended
[2025-11-21 00:08:29] 2025-11-21 00:08:24,101 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125340048877376)>', '<ExcThread(monitor, started 125339292399360)>']
[2025-11-21 00:08:29] 2025-11-21 00:08:24,393 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 00:08:29] 2025-11-21 00:08:24,394 | INFO     | [monitor] control thread has ended
[2025-11-21 00:08:29] 2025-11-21 00:08:29,127 | INFO     | all workflow threads have been joined
[2025-11-21 00:08:29] 2025-11-21 00:08:29,128 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 00:08:29] 2025-11-21 00:08:29,128 | INFO     | traces error code: 0
[2025-11-21 00:08:29] 2025-11-21 00:08:29,128 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 00:08:29] 2025-11-21 00:08:29,354 [wrapper] ==== pilot stdout END ====
[2025-11-21 00:08:29] 2025-11-21 00:08:29,359 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 00:08:29] 2025-11-21 00:08:29,362 [wrapper] pilotpid: 541789
[2025-11-21 00:08:29] 2025-11-21 00:08:29,367 [wrapper] Pilot exit status: 0
[2025-11-21 00:08:29] 2025-11-21 00:08:29,380 [wrapper] pandaids: 6892525884
[2025-11-21 00:08:29] 2025-11-21 00:08:29,449 [wrapper] cleanup supervisor_pilot 2160026 541793
[2025-11-21 00:08:29] 2025-11-21 00:08:29,454 [wrapper] Test setup, not cleaning
[2025-11-21 00:08:29] 2025-11-21 00:08:29,458 [wrapper] apfmon messages muted
[2025-11-21 00:08:29] 2025-11-21 00:08:29,462 [wrapper] ==== wrapper stdout END ====
[2025-11-21 00:08:29] 2025-11-21 00:08:29,465 [wrapper] ==== wrapper stderr END ====
[2025-11-21 00:08:29]  *** Error codes and diagnostics ***
[2025-11-21 00:08:29]     "exeErrorCode": 0,
[2025-11-21 00:08:29]     "exeErrorDiag": "",
[2025-11-21 00:08:29]     "pilotErrorCode": 0,
[2025-11-21 00:08:29]     "pilotErrorDiag": "",
[2025-11-21 00:08:29]  *** Listing of results directory ***
[2025-11-21 00:08:29] total 1334620
[2025-11-21 00:08:29] -rw-r--r-- 1 boinc boinc    576529 Nov 19 07:00 pilot3.tar.gz
[2025-11-21 00:08:29] -rwx------ 1 boinc boinc     36292 Nov 19 07:06 runpilot2-wrapper.sh
[2025-11-21 00:08:29] -rw-r--r-- 1 boinc boinc      5112 Nov 19 07:07 queuedata.json
[2025-11-21 00:08:29] -rw-r--r-- 1 boinc boinc       100 Nov 20 07:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 00:08:29] -rwxr-xr-x 1 boinc boinc      7986 Nov 20 07:25 run_atlas
[2025-11-21 00:08:29] -rw-r--r-- 1 boinc boinc       105 Nov 20 07:25 job.xml
[2025-11-21 00:08:29] -rw-r--r-- 2 boinc boinc 409687633 Nov 20 07:25 EVNT.47493027._000095.pool.root.1
[2025-11-21 00:08:29] drwxrwx--x 2 boinc boinc      4096 Nov 20 07:25 shared
[2025-11-21 00:08:29] -rw-r--r-- 2 boinc boinc    590102 Nov 20 07:25 input.tar.gz
[2025-11-21 00:08:29] -rw-r--r-- 2 boinc boinc     15120 Nov 20 07:25 start_atlas.sh
[2025-11-21 00:08:29] -rw-r--r-- 1 boinc boinc         0 Nov 20 07:25 boinc_setup_complete
[2025-11-21 00:08:29] -rw-r--r-- 1 boinc boinc      6663 Nov 20 07:25 init_data.xml
[2025-11-21 00:08:29] -rw-r--r-- 1 boinc boinc         0 Nov 20 07:25 boinc_lockfile
[2025-11-21 00:08:29] -rw-r--r-- 1 boinc boinc      2768 Nov 20 07:25 pandaJob.out
[2025-11-21 00:08:29] -rw------- 1 boinc boinc    989443 Nov 20 07:25 agis_schedconf.cvmfs.json
[2025-11-21 00:08:29] drwx------ 5 boinc boinc      4096 Nov 20 07:25 pilot3
[2025-11-21 00:08:29] -rw-r--r-- 1 boinc boinc       533 Nov 20 23:59 boinc_task_state.xml
[2025-11-21 00:08:29] -rw------- 1 boinc boinc 933045593 Nov 21 00:07 HITS.47493029._000901.pool.root.1
[2025-11-21 00:08:29] -rw------- 1 boinc boinc      1051 Nov 21 00:07 memory_monitor_summary.json
[2025-11-21 00:08:29] -rw------- 1 boinc boinc   1526164 Nov 21 00:07 agis_ddmendpoints.agis.ALL.json
[2025-11-21 00:08:29] -rw------- 1 boinc boinc   1695691 Nov 21 00:07 log.47493029._000901.job.log.tgz.1
[2025-11-21 00:08:29] -rw------- 1 boinc boinc      8616 Nov 21 00:07 heartbeat.json
[2025-11-21 00:08:29] -rw-r--r-- 1 boinc boinc      8192 Nov 21 00:08 boinc_mmap_file
[2025-11-21 00:08:29] -rw-r--r-- 1 boinc boinc        29 Nov 21 00:08 wrapper_checkpoint.txt
[2025-11-21 00:08:29] -rw------- 1 boinc boinc        95 Nov 21 00:08 pilot_heartbeat.json
[2025-11-21 00:08:29] -rw------- 1 boinc boinc      4965 Nov 21 00:08 pilotlog.txt
[2025-11-21 00:08:29] -rw------- 1 boinc boinc   8303245 Nov 21 00:08 log.47493029._000901.job.log.1
[2025-11-21 00:08:29] -rw------- 1 boinc boinc       353 Nov 21 00:08 output.list
[2025-11-21 00:08:29] -rw-r--r-- 1 boinc boinc       620 Nov 21 00:08 runtime_log
[2025-11-21 00:08:29] -rw------- 1 boinc boinc  10014720 Nov 21 00:08 result.tar.gz
[2025-11-21 00:08:29] -rw-r--r-- 1 boinc boinc      8807 Nov 21 00:08 runtime_log.err
[2025-11-21 00:08:29] -rw------- 1 boinc boinc       661 Nov 21 00:08 5xCNDmKSrf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmMsFKDmbJQY5n.diag
[2025-11-21 00:08:29] -rw-r--r-- 1 boinc boinc     20997 Nov 21 00:08 stderr.txt
[2025-11-21 00:08:29] HITS file was successfully produced:
[2025-11-21 00:08:29] -rw------- 1 boinc boinc 933045593 Nov 21 00:07 shared/HITS.pool.root.1
[2025-11-21 00:08:29]  *** Contents of shared directory: ***
[2025-11-21 00:08:29] total 1321652
[2025-11-21 00:08:29] -rw-r--r-- 2 boinc boinc 409687633 Nov 20 07:25 ATLAS.root_0
[2025-11-21 00:08:29] -rw-r--r-- 2 boinc boinc    590102 Nov 20 07:25 input.tar.gz
[2025-11-21 00:08:29] -rw-r--r-- 2 boinc boinc     15120 Nov 20 07:25 start_atlas.sh
[2025-11-21 00:08:29] -rw------- 1 boinc boinc 933045593 Nov 21 00:07 HITS.pool.root.1
[2025-11-21 00:08:29] -rw------- 1 boinc boinc  10014720 Nov 21 00:08 result.tar.gz
00:08:31 (494409): run_atlas exited; CPU time 235407.758760
00:08:31 (494409): called boinc_finish(0)

</stderr_txt>
]]>

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