Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:52:40 (18911): wrapper (7.7.26015): starting
09:52:40 (18911): wrapper: running run_atlas (--nthreads 8)
[2025-11-19 09:52:40] Arguments: --nthreads 8
[2025-11-19 09:52:40] Threads: 8
[2025-11-19 09:52:40] Checking for CVMFS
[2025-11-19 09:52:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-19 09:52:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-19 09:52:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-19 09:52:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-19 09:52:40] 2.11.2.0 26213 55671 88356 153047 1 81 11948140 20275201 1 130560 0 13051657 99.813 3330239 33188 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-19 09:52:40] CVMFS is ok
[2025-11-19 09:52:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-19 09:52:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-19 09:52:40] Further information can be found at the LHC@home message board.
[2025-11-19 09:52:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-19 09:52:40] Checking for apptainer binary...
[2025-11-19 09:52:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-19 09:52:40] Running /usr/bin/apptainer --version
[2025-11-19 09:52:40] apptainer version 1.3.2-1.el7
[2025-11-19 09:52:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-19 09:52:42] c-115-4.aglt2.org
[2025-11-19 09:52:42] apptainer works
[2025-11-19 09:52:42] Set ATHENA_PROC_NUMBER=8
[2025-11-19 09:52:42] Set ATHENA_CORE_NUMBER=8
[2025-11-19 09:52:42] Starting ATLAS job with PandaID=6892544046
[2025-11-19 09:52:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-19 21:04:12]  *** The last 200 lines of the pilot log: ***
[2025-11-19 21:04:12] 2025-11-20 02:03:23,096 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-19 21:04:12] 2025-11-20 02:03:23,616 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-19 21:04:12] 2025-11-20 02:03:23,620 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1712.5
[2025-11-19 21:04:12] 2025-11-20 02:03:23,622 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6892544046/memory_monitor_summary.json (trf name=prmon)
[2025-11-19 21:04:12] 2025-11-20 02:03:23,623 | INFO     | extracted standard info from prmon json
[2025-11-19 21:04:12] 2025-11-20 02:03:23,623 | INFO     | extracted standard memory fields from prmon json
[2025-11-19 21:04:12] 2025-11-20 02:03:23,623 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-19 21:04:12] 2025-11-20 02:03:23,633 | INFO     | fitting pss+swap vs Time
[2025-11-19 21:04:12] 2025-11-20 02:03:23,633 | INFO     | sum of square deviations: 88743476486.08209
[2025-11-19 21:04:12] 2025-11-20 02:03:23,641 | INFO     | sum of deviations: 776813266551.4905
[2025-11-19 21:04:12] 2025-11-20 02:03:23,642 | INFO     | mean x: 1763584082.693475
[2025-11-19 21:04:12] 2025-11-20 02:03:23,642 | INFO     | mean y: 3123694.4628224582
[2025-11-19 21:04:12] 2025-11-20 02:03:23,642 | INFO     | intersect: -15434354826.340786
[2025-11-19 21:04:12] 2025-11-20 02:03:23,643 | INFO     | chi2: 5.339496356024767
[2025-11-19 21:04:12] 2025-11-20 02:03:23,643 | INFO     | sum of square deviations: 86738955026.15898
[2025-11-19 21:04:12] 2025-11-20 02:03:23,651 | INFO     | sum of deviations: 1002716477439.0009
[2025-11-19 21:04:12] 2025-11-20 02:03:23,652 | INFO     | mean x: 1763583930.1987767
[2025-11-19 21:04:12] 2025-11-20 02:03:23,652 | INFO     | mean y: 3140872.5
[2025-11-19 21:04:12] 2025-11-20 02:03:23,652 | INFO     | intersect: -20384177208.78925
[2025-11-19 21:04:12] 2025-11-20 02:03:23,652 | INFO     | chi2: 2.410584152897832
[2025-11-19 21:04:12] 2025-11-20 02:03:23,653 | INFO     | current chi2=2.410584152897832 (change=54.85371667726913 %)
[2025-11-19 21:04:12] 2025-11-20 02:03:23,653 | INFO     | sum of square deviations: 84764773320.00911
[2025-11-19 21:04:12] 2025-11-20 02:03:23,661 | INFO     | sum of deviations: 1022222810783.3331
[2025-11-19 21:04:12] 2025-11-20 02:03:23,661 | INFO     | mean x: 1763583777.7010787
[2025-11-19 21:04:12] 2025-11-20 02:03:23,661 | INFO     | mean y: 3142368.238828968
[2025-11-19 21:04:12] 2025-11-20 02:03:23,662 | INFO     | intersect: -21264838370.49963
[2025-11-19 21:04:12] 2025-11-20 02:03:23,662 | INFO     | chi2: 2.280404898155254
[2025-11-19 21:04:12] 2025-11-20 02:03:23,662 | INFO     | current chi2=2.280404898155254 (change=5.400319859652506 %)
[2025-11-19 21:04:12] 2025-11-20 02:03:23,662 | INFO     | right removable region: 648
[2025-11-19 21:04:12] 2025-11-20 02:03:23,663 | INFO     | sum of square deviations: 86738676256.15898
[2025-11-19 21:04:12] 2025-11-20 02:03:23,671 | INFO     | sum of deviations: 587145280788.0695
[2025-11-19 21:04:12] 2025-11-20 02:03:23,671 | INFO     | mean x: 1763584235.1987767
[2025-11-19 21:04:12] 2025-11-20 02:03:23,671 | INFO     | mean y: 3138095.3379204893
[2025-11-19 21:04:12] 2025-11-20 02:03:23,671 | INFO     | intersect: -11934790930.823267
[2025-11-19 21:04:12] 2025-11-20 02:03:23,672 | INFO     | chi2: 3.240303254762934
[2025-11-19 21:04:12] 2025-11-20 02:03:23,672 | INFO     | current chi2=3.240303254762934 (change=39.31444018859999 %)
[2025-11-19 21:04:12] 2025-11-20 02:03:23,673 | INFO     | sum of square deviations: 84764374868.00917
[2025-11-19 21:04:12] 2025-11-20 02:03:23,681 | INFO     | sum of deviations: 549271160873.6025
[2025-11-19 21:04:12] 2025-11-20 02:03:23,681 | INFO     | mean x: 1763584387.7010787
[2025-11-19 21:04:12] 2025-11-20 02:03:23,681 | INFO     | mean y: 3141018.8536209553
[2025-11-19 21:04:12] 2025-11-20 02:03:23,681 | INFO     | intersect: -11424844446.025017
[2025-11-19 21:04:12] 2025-11-20 02:03:23,682 | INFO     | chi2: 3.2115629683929514
[2025-11-19 21:04:12] 2025-11-20 02:03:23,682 | INFO     | current chi2=3.2115629683929514 (change=0.8869628584218754 %)
[2025-11-19 21:04:12] 2025-11-20 02:03:23,682 | INFO     | left removable region: 20
[2025-11-19 21:04:12] 2025-11-20 02:03:23,683 | INFO     | sum of square deviations: 76799673181.67381
[2025-11-19 21:04:12] 2025-11-20 02:03:23,690 | INFO     | sum of deviations: 728185656036.1729
[2025-11-19 21:04:12] 2025-11-20 02:03:23,690 | INFO     | mean x: 1763584357.2085986
[2025-11-19 21:04:12] 2025-11-20 02:03:23,690 | INFO     | mean y: 3165276.708598726
[2025-11-19 21:04:12] 2025-11-20 02:03:23,690 | INFO     | intersect: -16718479216.376554
[2025-11-19 21:04:12] 2025-11-20 02:03:23,691 | INFO     | chi2: 0.1042815492518181
[2025-11-19 21:04:12] 2025-11-20 02:03:23,691 | INFO     | current memory leak: 9.48 B/s (using 628 data points, chi2=0.10)
[2025-11-19 21:04:12] 2025-11-20 02:03:23,692 | INFO     | could have reported an average CPU frequency of 2388 MHz (25 samples)
[2025-11-19 21:04:12] 2025-11-20 02:03:23,692 | INFO     | ..............................
[2025-11-19 21:04:12] 2025-11-20 02:03:23,692 | INFO     | . Timing measurements:
[2025-11-19 21:04:12] 2025-11-20 02:03:23,692 | INFO     | . get job = 0 s
[2025-11-19 21:04:12] 2025-11-20 02:03:23,692 | INFO     | . initial setup = 2 s
[2025-11-19 21:04:12] 2025-11-20 02:03:23,693 | INFO     | . payload setup = 9 s
[2025-11-19 21:04:12] 2025-11-20 02:03:23,693 | INFO     | . stage-in = 0 s
[2025-11-19 21:04:12] 2025-11-20 02:03:23,693 | INFO     | . payload execution = 40181 s
[2025-11-19 21:04:12] 2025-11-20 02:03:23,693 | INFO     | . stage-out = 3 s
[2025-11-19 21:04:12] 2025-11-20 02:03:23,693 | INFO     | . log creation = 0 s
[2025-11-19 21:04:12] 2025-11-20 02:03:23,693 | INFO     | ..............................
[2025-11-19 21:04:12] 2025-11-20 02:03:23,774 | INFO     | 
[2025-11-19 21:04:12] 2025-11-20 02:03:23,775 | INFO     | job summary report
[2025-11-19 21:04:12] 2025-11-20 02:03:23,775 | INFO     | --------------------------------------------------
[2025-11-19 21:04:12] 2025-11-20 02:03:23,775 | INFO     | PanDA job id: 6892544046
[2025-11-19 21:04:12] 2025-11-20 02:03:23,775 | INFO     | task id: 47493029
[2025-11-19 21:04:12] 2025-11-20 02:03:23,775 | INFO     | errors: (none)
[2025-11-19 21:04:12] 2025-11-20 02:03:23,775 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-19 21:04:12] 2025-11-20 02:03:23,775 | INFO     | pilot state: finished 
[2025-11-19 21:04:12] 2025-11-20 02:03:23,775 | INFO     | transexitcode: 0
[2025-11-19 21:04:12] 2025-11-20 02:03:23,775 | INFO     | exeerrorcode: 0
[2025-11-19 21:04:12] 2025-11-20 02:03:23,776 | INFO     | exeerrordiag: 
[2025-11-19 21:04:12] 2025-11-20 02:03:23,776 | INFO     | exitcode: 0
[2025-11-19 21:04:12] 2025-11-20 02:03:23,776 | INFO     | exitmsg: OK
[2025-11-19 21:04:12] 2025-11-20 02:03:23,776 | INFO     | cpuconsumptiontime: 308734 s
[2025-11-19 21:04:12] 2025-11-20 02:03:23,776 | INFO     | nevents: 1000
[2025-11-19 21:04:12] 2025-11-20 02:03:23,776 | INFO     | neventsw: 0
[2025-11-19 21:04:12] 2025-11-20 02:03:23,776 | INFO     | pid: 29086
[2025-11-19 21:04:12] 2025-11-20 02:03:23,776 | INFO     | pgrp: 29086
[2025-11-19 21:04:12] 2025-11-20 02:03:23,776 | INFO     | corecount: 8
[2025-11-19 21:04:12] 2025-11-20 02:03:23,776 | INFO     | event service: False
[2025-11-19 21:04:12] 2025-11-20 02:03:23,777 | INFO     | sizes: {0: 2297029, 1: 2297228, 6: 2297490, 11: 2297518, 40195: 2341040, 40199: 2350034, 40200: 2350218, 40206: 2350528}
[2025-11-19 21:04:12] 2025-11-20 02:03:23,777 | INFO     | --------------------------------------------------
[2025-11-19 21:04:12] 2025-11-20 02:03:23,777 | INFO     | 
[2025-11-19 21:04:12] 2025-11-20 02:03:23,777 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-19 21:04:12] 2025-11-20 02:03:23,807 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-19 21:04:12] 2025-11-20 02:03:23,807 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-19 21:04:12] 2025-11-20 02:03:23,808 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-19 21:04:12] 2025-11-20 02:03:23,808 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-19 21:04:12] 2025-11-20 02:03:23,808 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-19 21:04:12] 2025-11-20 02:03:23,808 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-19 21:04:12] 2025-11-20 02:03:23,808 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-19 21:04:12] 2025-11-20 02:03:23,809 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-19 21:04:12] 2025-11-20 02:03:23,809 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-19 21:04:12] 2025-11-20 02:03:23,809 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-19 21:04:12] 2025-11-20 02:03:23,809 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-19 21:04:12] 2025-11-20 02:03:23,809 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-19 21:04:12] 2025-11-20 02:03:23,809 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-19 21:04:12] 2025-11-20 02:03:23,810 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-19 21:04:12] 2025-11-20 02:03:23,810 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-19 21:04:12] 2025-11-20 02:03:23,810 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-19 21:04:12] 2025-11-20 02:03:23,810 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-19 21:04:12] 2025-11-20 02:03:23,811 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-19 21:04:12] 2025-11-20 02:03:23,811 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-19 21:04:12] 2025-11-20 02:03:23,811 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-19 21:04:12] 2025-11-20 02:03:23,811 | INFO     | job 6892544046 has completed (purged errors)
[2025-11-19 21:04:12] 2025-11-20 02:03:23,811 | INFO     | overall cleanup function is called
[2025-11-19 21:04:12] 2025-11-20 02:03:24,826 | INFO     | --- collectZombieJob: --- 10, [29086]
[2025-11-19 21:04:12] 2025-11-20 02:03:24,827 | INFO     | zombie collector waiting for pid 29086
[2025-11-19 21:04:12] 2025-11-20 02:03:24,827 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-19 21:04:12] 2025-11-20 02:03:24,827 | INFO     | collected zombie processes
[2025-11-19 21:04:12] 2025-11-20 02:03:24,827 | INFO     | will attempt to kill all subprocesses of pid=29086
[2025-11-19 21:04:12] 2025-11-20 02:03:24,911 | INFO     | process IDs to be killed: [29086] (in reverse order)
[2025-11-19 21:04:12] 2025-11-20 02:03:24,971 | WARNING  | found no corresponding commands to process id(s)
[2025-11-19 21:04:12] 2025-11-20 02:03:24,971 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-19 21:04:12] 2025-11-20 02:03:24,975 | INFO     | did not find any defunct processes belonging to 29086
[2025-11-19 21:04:12] 2025-11-20 02:03:24,977 | INFO     | did not find any defunct processes belonging to 29086
[2025-11-19 21:04:12] 2025-11-20 02:03:24,980 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-19 21:04:12] 2025-11-20 02:03:24,980 | INFO     | ready for new job
[2025-11-19 21:04:12] 2025-11-20 02:03:24,980 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-19 21:04:12] 2025-11-20 02:03:24,983 | INFO     | ***************************************
[2025-11-19 21:04:12] 2025-11-20 02:03:24,983 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-19 21:04:12] 2025-11-20 02:03:24,983 | INFO     | ***************************************
[2025-11-19 21:04:12] 2025-11-20 02:03:24,983 | INFO     | 
[2025-11-19 21:04:12] 2025-11-20 02:03:24,984 | INFO     | architecture information:
[2025-11-19 21:04:12] 2025-11-20 02:03:24,985 | INFO     | executing command: cat /etc/os-release
[2025-11-19 21:04:12] 2025-11-20 02:03:25,003 | INFO     | cat /etc/os-release:
[2025-11-19 21:04:12] NAME="CentOS Linux"
[2025-11-19 21:04:12] VERSION="7 (Core)"
[2025-11-19 21:04:12] ID="centos"
[2025-11-19 21:04:12] ID_LIKE="rhel fedora"
[2025-11-19 21:04:12] VERSION_ID="7"
[2025-11-19 21:04:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-19 21:04:12] ANSI_COLOR="0;31"
[2025-11-19 21:04:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-19 21:04:12] HOME_URL="https://www.centos.org/"
[2025-11-19 21:04:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-19 21:04:12] 
[2025-11-19 21:04:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-19 21:04:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-19 21:04:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-19 21:04:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-19 21:04:12] 
[2025-11-19 21:04:12] 2025-11-20 02:03:25,003 | INFO     | ***************************************
[2025-11-19 21:04:12] 2025-11-20 02:03:25,506 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-19 21:04:12] 2025-11-20 02:03:25,528 | INFO     | sufficient remaining disk space (17482907648 B)
[2025-11-19 21:04:12] 2025-11-20 02:03:25,529 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-19 21:04:12] 2025-11-20 02:03:25,529 | INFO     | current server update state: UPDATING_FINAL
[2025-11-19 21:04:12] 2025-11-20 02:03:25,529 | INFO     | update_server=False
[2025-11-19 21:04:12] 2025-11-20 02:03:25,529 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-19 21:04:12] 2025-11-20 02:03:25,530 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-19 21:04:12] 2025-11-20 02:03:25,530 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-19 21:04:12] 2025-11-20 02:03:25,600 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-19 21:04:12] 2025-11-20 02:03:25,600 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-19 21:04:12] 2025-11-20 02:03:25,600 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-19 21:04:12] 2025-11-20 02:03:25,600 | INFO     | will abort loop
[2025-11-19 21:04:12] 2025-11-20 02:03:26,232 | INFO     | all payload control threads have been joined
[2025-11-19 21:04:12] 2025-11-20 02:03:26,535 | INFO     | [job] retrieve thread has finished
[2025-11-19 21:04:12] 2025-11-20 02:03:26,536 | INFO     | [job] queue monitor thread has finished
[2025-11-19 21:04:12] 2025-11-20 02:03:26,569 | INFO     | all data control threads have been joined
[2025-11-19 21:04:12] 2025-11-20 02:03:26,606 | INFO     | [job] job monitor thread has finished
[2025-11-19 21:04:12] 2025-11-20 02:03:26,619 | INFO     | [payload] validate_post thread has finished
[2025-11-19 21:04:12] 2025-11-20 02:03:26,777 | INFO     | all job control threads have been joined
[2025-11-19 21:04:12] 2025-11-20 02:03:26,971 | INFO     | [payload] execute_payloads thread has finished
[2025-11-19 21:04:12] 2025-11-20 02:03:27,129 | INFO     | [payload] validate_pre thread has finished
[2025-11-19 21:04:12] 2025-11-20 02:03:27,197 | INFO     | [job] create_data_payload thread has finished
[2025-11-19 21:04:12] 2025-11-20 02:03:27,218 | INFO     | [data] copytool_in thread has finished
[2025-11-19 21:04:12] 2025-11-20 02:03:27,238 | INFO     | [payload] control thread has finished
[2025-11-19 21:04:12] 2025-11-20 02:03:27,239 | INFO     | [job] validate thread has finished
[2025-11-19 21:04:12] 2025-11-20 02:03:27,536 | INFO     | [data] copytool_out thread has finished
[2025-11-19 21:04:12] 2025-11-20 02:03:27,574 | INFO     | [data] control thread has finished
[2025-11-19 21:04:12] 2025-11-20 02:03:27,782 | INFO     | [job] control thread has finished
[2025-11-19 21:04:12] 2025-11-20 02:03:28,067 | INFO     | [payload] failed_post thread has finished
[2025-11-19 21:04:12] 2025-11-20 02:03:28,325 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-19 21:04:12] 2025-11-20 02:03:32,332 | INFO     | [data] queue_monitor thread has finished
[2025-11-19 21:04:12] 2025-11-20 02:03:35,636 | INFO     | job.realtimelogging is not enabled
[2025-11-19 21:04:12] 2025-11-20 02:03:36,642 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-19 21:04:12] 2025-11-20 02:03:55,679 | INFO     | PID=22596 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-19 21:04:12] 2025-11-20 02:03:55,680 | INFO     | found 0 job(s) in 20 queues
[2025-11-19 21:04:12] 2025-11-20 02:03:55,680 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-19 21:04:12] 2025-11-20 02:03:55,680 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-19 21:04:12] 2025-11-20 02:04:06,936 | INFO     | [monitor] cgroup control has ended
[2025-11-19 21:04:12] 2025-11-20 02:04:07,513 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140136978569024)>', '<ExcThread(monitor, started 140136276793088)>']
[2025-11-19 21:04:12] 2025-11-20 02:04:07,732 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-19 21:04:12] 2025-11-20 02:04:07,733 | INFO     | [monitor] control thread has ended
[2025-11-19 21:04:12] 2025-11-20 02:04:12,539 | INFO     | all workflow threads have been joined
[2025-11-19 21:04:12] 2025-11-20 02:04:12,539 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-19 21:04:12] 2025-11-20 02:04:12,540 | INFO     | traces error code: 0
[2025-11-19 21:04:12] 2025-11-20 02:04:12,540 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-19 21:04:12] 2025-11-20 02:04:12,659 [wrapper] ==== pilot stdout END ====
[2025-11-19 21:04:12] 2025-11-20 02:04:12,663 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-19 21:04:12] 2025-11-20 02:04:12,668 [wrapper] pilotpid: 22596
[2025-11-19 21:04:12] 2025-11-20 02:04:12,672 [wrapper] Pilot exit status: 0
[2025-11-19 21:04:12] 2025-11-20 02:04:12,687 [wrapper] pandaids: 6892544046
[2025-11-19 21:04:12] 2025-11-20 02:04:12,740 [wrapper] cleanup supervisor_pilot  9651 22597
[2025-11-19 21:04:12] 2025-11-20 02:04:12,745 [wrapper] Test setup, not cleaning
[2025-11-19 21:04:12] 2025-11-20 02:04:12,749 [wrapper] apfmon messages muted
[2025-11-19 21:04:12] 2025-11-20 02:04:12,753 [wrapper] ==== wrapper stdout END ====
[2025-11-19 21:04:12] 2025-11-20 02:04:12,758 [wrapper] ==== wrapper stderr END ====
[2025-11-19 21:04:12]  *** Error codes and diagnostics ***
[2025-11-19 21:04:12]     "exeErrorCode": 0,
[2025-11-19 21:04:12]     "exeErrorDiag": "",
[2025-11-19 21:04:12]     "pilotErrorCode": 0,
[2025-11-19 21:04:12]     "pilotErrorDiag": "",
[2025-11-19 21:04:12]  *** Listing of results directory ***
[2025-11-19 21:04:12] total 1312400
[2025-11-19 21:04:12] -rw-r--r-- 1 boincer umatlas    576529 Nov 19 03:00 pilot3.tar.gz
[2025-11-19 21:04:12] -rw-r--r-- 1 boincer umatlas      5112 Nov 19 03:05 queuedata.json
[2025-11-19 21:04:12] -rwx------ 1 boincer umatlas     36292 Nov 19 03:06 runpilot2-wrapper.sh
[2025-11-19 21:04:12] -rw-r--r-- 1 boincer umatlas       100 Nov 19 09:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-19 21:04:12] -rwxr-xr-x 1 boincer umatlas      7986 Nov 19 09:52 run_atlas
[2025-11-19 21:04:12] -rw-r--r-- 1 boincer umatlas       105 Nov 19 09:52 job.xml
[2025-11-19 21:04:12] -rw-r--r-- 2 boincer umatlas 409848390 Nov 19 09:52 EVNT.47493027._000271.pool.root.1
[2025-11-19 21:04:12] -rw-r--r-- 2 boincer umatlas     15120 Nov 19 09:52 start_atlas.sh
[2025-11-19 21:04:12] drwxrwx--x 2 boincer umatlas      4096 Nov 19 09:52 shared
[2025-11-19 21:04:12] -rw-r--r-- 2 boincer umatlas    590100 Nov 19 09:52 input.tar.gz
[2025-11-19 21:04:12] -rw-r--r-- 1 boincer umatlas         0 Nov 19 09:52 boinc_lockfile
[2025-11-19 21:04:12] -rw-r--r-- 1 boincer umatlas      2773 Nov 19 09:52 pandaJob.out
[2025-11-19 21:04:12] -rw------- 1 boincer umatlas    989442 Nov 19 09:52 agis_schedconf.cvmfs.json
[2025-11-19 21:04:12] drwx------ 5 boincer umatlas      4096 Nov 19 09:53 pilot3
[2025-11-19 21:04:12] -rw-r--r-- 1 boincer umatlas       533 Nov 19 20:54 boinc_task_state.xml
[2025-11-19 21:04:12] -rw-r--r-- 1 boincer umatlas      5911 Nov 19 21:02 init_data.xml
[2025-11-19 21:04:12] -rw------- 1 boincer umatlas 915283939 Nov 19 21:02 HITS.47493029._002663.pool.root.1
[2025-11-19 21:04:12] -rw------- 1 boincer umatlas      1062 Nov 19 21:03 memory_monitor_summary.json
[2025-11-19 21:04:12] -rw------- 1 boincer umatlas   1525063 Nov 19 21:03 agis_ddmendpoints.agis.ALL.json
[2025-11-19 21:04:12] -rw------- 1 boincer umatlas   1904043 Nov 19 21:03 log.47493029._002663.job.log.tgz.1
[2025-11-19 21:04:12] -rw------- 1 boincer umatlas      8657 Nov 19 21:03 heartbeat.json
[2025-11-19 21:04:12] -rw-r--r-- 1 boincer umatlas      8192 Nov 19 21:03 boinc_mmap_file
[2025-11-19 21:04:12] -rw-r--r-- 1 boincer umatlas        29 Nov 19 21:03 wrapper_checkpoint.txt
[2025-11-19 21:04:12] -rw------- 1 boincer umatlas        95 Nov 19 21:03 pilot_heartbeat.json
[2025-11-19 21:04:12] -rw------- 1 boincer umatlas      5004 Nov 19 21:04 pilotlog.txt
[2025-11-19 21:04:12] -rw------- 1 boincer umatlas   5518787 Nov 19 21:04 log.47493029._002663.job.log.1
[2025-11-19 21:04:12] -rw------- 1 boincer umatlas       353 Nov 19 21:04 output.list
[2025-11-19 21:04:12] -rw-r--r-- 1 boincer umatlas       620 Nov 19 21:04 runtime_log
[2025-11-19 21:04:12] -rw------- 1 boincer umatlas   7444480 Nov 19 21:04 result.tar.gz
[2025-11-19 21:04:12] -rw-r--r-- 1 boincer umatlas      8699 Nov 19 21:04 runtime_log.err
[2025-11-19 21:04:12] -rw------- 1 boincer umatlas       666 Nov 19 21:04 KBXNDmUOsf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpyGKDmxkz9um.diag
[2025-11-19 21:04:12] -rw-r--r-- 1 boincer umatlas     21263 Nov 19 21:04 stderr.txt
[2025-11-19 21:04:12] HITS file was successfully produced:
[2025-11-19 21:04:12] -rw------- 1 boincer umatlas 915283939 Nov 19 21:02 shared/HITS.pool.root.1
[2025-11-19 21:04:12]  *** Contents of shared directory: ***
[2025-11-19 21:04:12] total 1301948
[2025-11-19 21:04:12] -rw-r--r-- 2 boincer umatlas 409848390 Nov 19 09:52 ATLAS.root_0
[2025-11-19 21:04:12] -rw-r--r-- 2 boincer umatlas     15120 Nov 19 09:52 start_atlas.sh
[2025-11-19 21:04:12] -rw-r--r-- 2 boincer umatlas    590100 Nov 19 09:52 input.tar.gz
[2025-11-19 21:04:12] -rw------- 1 boincer umatlas 915283939 Nov 19 21:02 HITS.pool.root.1
[2025-11-19 21:04:12] -rw------- 1 boincer umatlas   7444480 Nov 19 21:04 result.tar.gz
21:04:14 (18911): run_atlas exited; CPU time 306934.671850
21:04:14 (18911): called boinc_finish(0)

</stderr_txt>
]]>

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